CsaV3_4G005830 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G005830
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	PLAC8 family protein
Location	chr4 : 3841897 .. 3846234 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTGTTTTCTTCAAGTAATTCCCTCTGCCCTAAAACCTTCTTTTCTTTTCATCTTCTACATTTTTTCTGTATCCTTCATTCTTATACTTTGAACAATTTTCAACCTCATTTTCACCATTGTTTTGCCTTCTCTCTAGATTCTGGTTGTTGTGCAGCCATGGCTATGCAGCAGCAACACCTTGATAAGATGCAACTCCGCCAGAACTACCGTAATCTCTGGCACACTGATCTAATGCGTACCATTCAGGCTGACACTTCATGTACCTTCCATTTCTCTCTCTCTCTCTCTTTGCTTTTGCATGTTTCTCTTGATCATCGCCTGAAAGTTTCTAATTTCTGATGTGGGTTCATGTTTTATTGCAGATTGCTGCTTTGCGTTGTGGTGGTGAGTTCGATGGATTTTTTTTCTTTTTTCTTTTTTCTTTTTTTTTCTGCGTGTGTGTGTGTTATTTTCTTAATTCTGCTTGGAATTTACTTGTGGATCTGCTTTCTTTGCTTAGTTCATTTATCTGTGTTTGTTTGAGCTATTTGCTTGCTATTTTGATCGATGGTTTTGGCTTGTCCAATGCTTCTTCATATTCTGATTGTTGGATTGTTTCTTGCATTGGCACTTTCGAGATCTTGATTTCTCTAGTCAGATGTCGACGCGTTGACTTGTTTTCTTTTTGCGTTGACTTGGTCGTAGTTGTGAAAATTTATTCTGTTTCTGATAATTGAGTAATAACTTAAGCTTGTTTTGCGTCGGTTGATGGAGTTTCGTAAAATGAAATGAGATTGCCATGTTTTGTATGACTGACGACATACCCCGATGATTTGTCTCTGTTTCTAGCTCCTGAGTATAGTCTGTACGCAGATGCCTAAATAGGGATTAGATTCAATAGACTAACCAAAAACTACGTGTCATTAGTTAGTTATGCAGTTTAGAAGGGCCAATAGGCAATAGTCCAAATCAACATCTTTTGAGCAAATTGAATTTAATGATTTCAATCAAAGATTAGTCCCATTAGGAATAGATGAATCCTTGATAGGAAATATAATGGTTTTTATTCTTCTTTGTAAATAGTTAAGGTGTTGATGGTGCTATAGGGTGTTATCCATTTTCTTTGTTTCTCTCCCCACATTTCATCTTGATTAGGAGGCTTTCCCAAGGTAGCAATGATCAATCAAGGTTGCTTTGTGTTGTGTAGTTTGGTTGGTTTGGGGAGTTAGTGTTGGGTTTTTGGCTGGAAACTTTAAGGTGGTTCATTGGTCTTCTGAAAATCTTTAACTGGACCTATTATTAGCAGGAAGCATTATGTACCAAATCACCTTCTTGATTAACGATGATGTTTATTGTTTCCCATGTGGACTTTTTCTTTTTCTCATTGGAAGACTAAAAGATCATATAGCTTAGAGAGGAAAGCATGGTTGGGTCAACCCTAGTTTGAAGTAGCAAAAACTATTTTTTTTGCTCTGAAAAGGAATTTTCTTCAGTTTAGAAAATAGCAAAAGGTTTTAGTCTCAGCCTTCGGGAGGATACTCGGTTGGGCTATCCCCTTTTGGACTTGCTCTTCCCTTCCGTTACACTATGACCATATTAGATTCTAATCTCTATGGGCAAGTCAGGGTGTGCTGAATTTCGGTAAATCTTTATTGGAATTCTTTCTGGTGGAGGGGTTGGGACTGGGAGCTAAAGGAATGGGCTTCTTTTATTTTAAAAACTAGAGTTAGCTTTTTCTGAGCAAGAGGAAGGAAGACTACAGTCGACAGTTTGGGGTGTTCTGTAATGTGCCGGATTTGTGAATGAACCTTGATAATGATATAAATGTTTTAGAAAATTCCTCGAGAGACTTAATTGAAGAGGAAACTTGAGGAAAACATAAATGCTCCTTTGGATTTGAGGCTACAAAACTCTTGAAAAATTTTCAGGGGTGTTTGGGCCAATGAGTTAGGAAGTATGGAGTTGTGAACTCCACTACTTGTTTAGCCCAAGGATTTTGTGGGTTCCGCTACTAAAAACATCAATTTTATGTCTTATTAAGTTCTTACGTAAGCCCCATGAGTTCAAAAGTCCCTAAGCTTCACAACTCCACTTCTTGCCCCAAACACCCTCTTATGAAGTGTATGGCCTTGCTATCTTAAGTCCTTTTACGAGTGACTTTTGGAGGTACTTCGGATCATCTTTCATTTCAACTTATTTATTTTAAATGTTAAACATATCTAATACATATACCATTTGCTGAATAGACAATTCCAGGTTAGTTTATAAAAAGGTTTGTGCCTATTTTTATTTTCTTTTACATTATGTAATCCCTCATTTCATTATTTGTATCAGTGAGAAATCACAAACTTTCTATTTTCTTCCTTGACTTATCATCAATAGATTGTTGTAGCTACTTTTTAAAAACCAAAAACTGGTTTCATGTAGTCACTTAATTATTTATTATTATTATTTTTTTGCAGTGGGCCTTGTGTATCATATTTGCTTCGTAAAAGAGCTTTATACAATGACATGTCAAGGTAATTTATTTTGTCTTTTGACTTCCTAAGAAATTGAAATTGTTTTGATTTTGCAAGTCATTTTTGTGTTTTGTTTTTCCACAGATATGTGTGCTGTGCAGGCTATATGCCATGTAGTGGCAGGTGTGGAGAAAGTAAATGCCCTGAATTTTGTCTGTGCACAGAGGTAAAAAATGTTTCAGTTGTAATAGTTATTTATGTAATTCCTTCTTTTGATTCTTTGAATGTTTTTCTGCCATAAATCTTACGATTTTCCAGTTATGTTTGTTACCCACAAGAAGTTGAAAACAAAACCGAGTACTCCATTTGTATTTGATTTGGTCTTGTGTGTAGGTGTGGCTAAACTGGTTGTAATTATTGACTCAAATTGTATCCAAAAATAAAATTTACTATGCTCCAGAAGCAGAGAGAATATGATTAATAATAAAATTTCATTTCTGTACGTCAAGTGCAAGTGCGTTCATTGATCTTGGGTTCAGTATTTTTTGTACAGAGACTGGTGAATGCATTTCTTTTTGAATAGCATATTTATGTTTTACTCATATGTTACATGTTTTCATATTTATTCCTGCTTTCAGCACTGCTGCAGTTAACTTAATGCATTTTCATTTGATCTTCAAGGTTTTCCTCTGCTTTGGGAATTCAGTGGCCTCAACTCGATTTCTGTTGCAAGATGAATTCAACATACAGACAACACAATGCGATAATTGCATTATCGTATGTACTATAAGCTCCGTCTCTCACTTTCTGTCTATAATTCCCTGTTCCCTTTATTCATGTGTTCTTAAATCATTCAGGGTTTTATGTTCTGTCTACAACAAATAGCTTGCATATTTTCCATCGTTGCTTTGATAGTAGGAAGTGAAGAAATTCAAGAGGCTTCACAGCTGCTCTCTTGCTTGGCTGATATGGTTTATTGCTCGTAAGCTCGCACTTCCAAATCCGCTTATTATTCTCTTCCATTGTAACCAAGTTACTAACAACTCTTCTTTCAACAGGGTTTGCGCATGTATGCAGGTAAGGAGTGAAAAGATGCTTCAGGTATCAAAATTTAAACGATAAATGGTTAACTAATTGAGATGATTTGCAGACTCAACATAAAATTGAGATGGATAAGAGAGATGGGGTGTTCGGAACACAAGCAATGGCAGTGCCTCCTGCTCAATATATGTCACGGATCGATCAGCCAATTCCTCCCTCGGTTGGATATCCACCACAACCTGCATACGGACAGCCCTATGCACCTCAGTCTCAAGGCTATCCAGCTCCGGGTTATCCACAACCAGGTTATCCACAACCAGGTTATCCCCCTACTGGATATAGGTAATATCTGCACTCTTCCGCAGATTCCGCCATCATTCATTGTGTTTTTGTCCATGGTTTTATGATTTTCATCCAAGTTTGCTGCTCGCTCTCACTTGTATGTGTTGATTTGTATAATGAATTAATACTACAGAGTATATGGTGTGAAGTTGGTTAAAGAATGATTTGGATGTGCTAAATTTCTCGACTTCAGAACCTTTTTGTTTTAGCTGTGGGTGAAAATGGAAGTATTTCTCATTTGTTATTGTTTTCATGGTCAATGGAGACAAGCACATGCTTGGTTGAAAATAATAGTTTTCTTATTCATTAATTGCCTCACAATTCAGATCTACCATTTAAGAGATATTATTAATATTTTAACCAATAGCTTCGGGTTGGCTATATAATCTTACTCATTAGAGGGAATGCTATTTTTTGGTTTATCATAGTAGCTAAGTAGGTTTCTTTTTCTCTACATGGATTTGTTCACATTTATTTTGATGATATAATATTATTGCCATGCCACCCACTTTTCA

mRNA sequence

ATGGCTATGCAGCAGCAACACCTTGATAAGATGCAACTCCGCCAGAACTACCGTAATCTCTGGCACACTGATCTAATGCGTACCATTCAGGCTGACACTTCATATTGCTGCTTTGCGTTGTGGTGTGGGCCTTGTGTATCATATTTGCTTCGTAAAAGAGCTTTATACAATGACATGTCAAGATATGTGTGCTGTGCAGGCTATATGCCATGTAGTGGCAGGTGTGGAGAAAGTAAATGCCCTGAATTTTGTCTGTGCACAGAGGTTTTCCTCTGCTTTGGGAATTCAGTGGCCTCAACTCGATTTCTGTTGCAAGATGAATTCAACATACAGACAACACAATGCGATAATTGCATTATCGGTTTTATGTTCTGTCTACAACAAATAGCTTGCATATTTTCCATCGTTGCTTTGATAGTAGGAAGTGAAGAAATTCAAGAGGCTTCACAGCTGCTCTCTTGCTTGGCTGATATGGTTTATTGCTCGGTTTGCGCATGTATGCAGACTCAACATAAAATTGAGATGGATAAGAGAGATGGGGTGTTCGGAACACAAGCAATGGCAGTGCCTCCTGCTCAATATATGTCACGGATCGATCAGCCAATTCCTCCCTCGGTTGGATATCCACCACAACCTGCATACGGACAGCCCTATGCACCTCAGTCTCAAGGCTATCCAGCTCCGGGTTATCCACAACCAGGTTATCCACAACCAGGTTATCCCCCTACTGGATATAGGTAA

Coding sequence (CDS)

ATGGCTATGCAGCAGCAACACCTTGATAAGATGCAACTCCGCCAGAACTACCGTAATCTCTGGCACACTGATCTAATGCGTACCATTCAGGCTGACACTTCATATTGCTGCTTTGCGTTGTGGTGTGGGCCTTGTGTATCATATTTGCTTCGTAAAAGAGCTTTATACAATGACATGTCAAGATATGTGTGCTGTGCAGGCTATATGCCATGTAGTGGCAGGTGTGGAGAAAGTAAATGCCCTGAATTTTGTCTGTGCACAGAGGTTTTCCTCTGCTTTGGGAATTCAGTGGCCTCAACTCGATTTCTGTTGCAAGATGAATTCAACATACAGACAACACAATGCGATAATTGCATTATCGGTTTTATGTTCTGTCTACAACAAATAGCTTGCATATTTTCCATCGTTGCTTTGATAGTAGGAAGTGAAGAAATTCAAGAGGCTTCACAGCTGCTCTCTTGCTTGGCTGATATGGTTTATTGCTCGGTTTGCGCATGTATGCAGACTCAACATAAAATTGAGATGGATAAGAGAGATGGGGTGTTCGGAACACAAGCAATGGCAGTGCCTCCTGCTCAATATATGTCACGGATCGATCAGCCAATTCCTCCCTCGGTTGGATATCCACCACAACCTGCATACGGACAGCCCTATGCACCTCAGTCTCAAGGCTATCCAGCTCCGGGTTATCCACAACCAGGTTATCCACAACCAGGTTATCCCCCTACTGGATATAGGTAA

Protein sequence

MAMQQQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMSRYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDGVFGTQAMAVPPAQYMSRIDQPIPPSVGYPPQPAYGQPYAPQSQGYPAPGYPQPGYPQPGYPPTGYR

Homology

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BLAST of CsaV3_4G005830 vs. NCBI nr
Match: XP_011653175.1 (PREDICTED: uncharacterized protein LOC101209140 [Cucumis sativus] >XP_011653176.1 PREDICTED: uncharacterized protein LOC101209140 [Cucumis sativus] >KGN53327.1 hypothetical protein Csa_4G047880 [Cucumis sativus])

HSP 1 Score: 454.9 bits (1169), Expect = 1.7e-124
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAMQQQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMS 60
           MAMQQQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMS
Sbjct: 1   MAMQQQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMS 60

Query: 61  RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII 120
           RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII
Sbjct: 61  RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII 120

Query: 121 GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG 180
           GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG
Sbjct: 121 GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG 180

Query: 181 VFGTQAMAVPPAQYMSRIDQPIPPSVGYPPQPAYGQ 217
           VFGTQAMAVPPAQYMSRIDQPIPPSVGYPPQPAYGQ
Sbjct: 181 VFGTQAMAVPPAQYMSRIDQPIPPSVGYPPQPAYGQ 216

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BLAST of CsaV3_4G005830 vs. NCBI nr
Match: XP_008452048.1 (PREDICTED: uncharacterized protein LOC103493173 [Cucumis melo] >XP_008452049.1 PREDICTED: uncharacterized protein LOC103493173 [Cucumis melo] >XP_008452050.1 PREDICTED: uncharacterized protein LOC103493173 [Cucumis melo])

HSP 1 Score: 430.6 bits (1106), Expect = 3.5e-117
Identity = 204/208 (98.08%), Postives = 205/208 (98.56%), Query Frame = 0


Query: 1   MAMQQQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMS 60
           MAMQQQHLDKMQLRQNYRNLWHTDLMRTIQADT YCCFALWCGPCVSYLLRKRALYNDMS
Sbjct: 1   MAMQQQHLDKMQLRQNYRNLWHTDLMRTIQADTPYCCFALWCGPCVSYLLRKRALYNDMS 60

Query: 61  RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII 120
           RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII
Sbjct: 61  RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII 120

Query: 121 GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG 180
           GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG
Sbjct: 121 GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG 180

Query: 181 VFGTQAMAVPPAQYMSRIDQPIPPSVGY 209
           +FG Q MAVPPAQYMSRIDQPIPPSVGY
Sbjct: 181 MFGPQVMAVPPAQYMSRIDQPIPPSVGY 208

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BLAST of CsaV3_4G005830 vs. NCBI nr
Match: XP_022982459.1 (uncharacterized protein LOC111481274 [Cucurbita maxima] >XP_022982467.1 uncharacterized protein LOC111481274 [Cucurbita maxima] >XP_022982476.1 uncharacterized protein LOC111481274 [Cucurbita maxima])

HSP 1 Score: 423.3 bits (1087), Expect = 5.6e-115
Identity = 201/215 (93.49%), Postives = 206/215 (95.81%), Query Frame = 0


Query: 1   MAMQQQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMS 60
           MAMQQQHLDKMQLRQ+YRNLWHTDL+ TIQADT YCC ALWCGPCVSYLLRKRALYNDMS
Sbjct: 1   MAMQQQHLDKMQLRQSYRNLWHTDLIHTIQADTPYCCLALWCGPCVSYLLRKRALYNDMS 60

Query: 61  RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII 120
           RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTT+CDNCII
Sbjct: 61  RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTKCDNCII 120

Query: 121 GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG 180
           GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG
Sbjct: 121 GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG 180

Query: 181 VFGTQAMAVPPAQYMSRIDQPIPPSVGYPPQPAYG 216
           +FG Q MAVPP Q MSRIDQ IPPSVG+ PQPAYG
Sbjct: 181 MFGPQVMAVPPFQQMSRIDQAIPPSVGHAPQPAYG 215

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BLAST of CsaV3_4G005830 vs. NCBI nr
Match: XP_024031337.1 (uncharacterized protein LOC21406988 [Morus notabilis])

HSP 1 Score: 414.1 bits (1063), Expect = 3.4e-112
Identity = 196/213 (92.02%), Postives = 202/213 (94.84%), Query Frame = 0


Query: 5   QQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMSRYVC 64
           QQHL+KMQ+RQNYRNLWHTDLM TI+ADT YCCFALWC PC SYLLRKRALYNDMSRYVC
Sbjct: 4   QQHLEKMQIRQNYRNLWHTDLMSTIKADTPYCCFALWCAPCASYLLRKRALYNDMSRYVC 63

Query: 65  CAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMF 124
           CAGYMPCSGRCGES+CPEFCL TEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMF
Sbjct: 64  CAGYMPCSGRCGESRCPEFCLATEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMF 123

Query: 125 CLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDGVFGT 184
           CLQQIACIFSIVALIVGSEEIQ+ASQLLSCLADMVYCSVCACMQTQHK+EMDKRDG FG 
Sbjct: 124 CLQQIACIFSIVALIVGSEEIQQASQLLSCLADMVYCSVCACMQTQHKVEMDKRDGKFGP 183

Query: 185 Q-AMAVPPAQYMSRIDQPIPPSVGYPPQPAYGQ 217
           Q  MAVPP Q MSRIDQPIPPSVGYPPQPAYGQ
Sbjct: 184 QPVMAVPPIQQMSRIDQPIPPSVGYPPQPAYGQ 216

[Close]

BLAST of CsaV3_4G005830 vs. NCBI nr
Match: XP_021668381.1 (uncharacterized protein LOC110656106 [Hevea brasiliensis])

HSP 1 Score: 411.0 bits (1055), Expect = 2.9e-111
Identity = 195/213 (91.55%), Postives = 201/213 (94.37%), Query Frame = 0


Query: 5   QQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMSRYVC 64
           ++HLDKMQ+RQNYRNLWHTDLMRTIQADT YCCF+ WCGPCVSYLLRKRALYNDMSRYVC
Sbjct: 4   REHLDKMQIRQNYRNLWHTDLMRTIQADTPYCCFSFWCGPCVSYLLRKRALYNDMSRYVC 63

Query: 65  CAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMF 124
           CAGYMPCSGRCGESKCPE CL TEVF CFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMF
Sbjct: 64  CAGYMPCSGRCGESKCPELCLATEVFCCFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMF 123

Query: 125 CLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDGVFGT 184
           CLQQIACIFSIVA+IVGSEEIQEASQLLSCLADMVYC+VCACMQTQHKIEMDKRDG FG 
Sbjct: 124 CLQQIACIFSIVAMIVGSEEIQEASQLLSCLADMVYCTVCACMQTQHKIEMDKRDGKFGP 183

Query: 185 Q-AMAVPPAQYMSRIDQPIPPSVGYPPQPAYGQ 217
           Q  MAVPP Q MSRIDQPIPPSVGYPPQ AYGQ
Sbjct: 184 QPVMAVPPFQQMSRIDQPIPPSVGYPPQQAYGQ 216

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BLAST of CsaV3_4G005830 vs. TAIR10
Match: AT1G63830.2 (PLAC8 family protein)

HSP 1 Score: 372.5 bits (955), Expect = 2.1e-103
Identity = 171/209 (81.82%), Postives = 187/209 (89.47%), Query Frame = 0


Query: 1   MAMQQQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMS 60
           MA  Q  LDKM+LRQ+YRNLWH+DLM T+ ADT YCC +  CGPCVSY+LR+RALYNDMS
Sbjct: 1   MAASQDKLDKMKLRQDYRNLWHSDLMGTVTADTPYCCISCLCGPCVSYMLRRRALYNDMS 60

Query: 61  RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII 120
           RY CCAGYMPCSGRCGESKCP+ CL TEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII
Sbjct: 61  RYTCCAGYMPCSGRCGESKCPQLCLATEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII 120

Query: 121 GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG 180
           GFMFCL Q+ACIFSIVA IVGS+E+ EASQ+LSC ADMVYC+VCACMQTQHK+EMDKRDG
Sbjct: 121 GFMFCLSQVACIFSIVACIVGSDELSEASQILSCCADMVYCTVCACMQTQHKLEMDKRDG 180

Query: 181 VFGTQAMAVPPAQYMSRIDQPIPPSVGYP 210
           VFG+Q M VPPAQ MSR DQP+PP VGYP
Sbjct: 181 VFGSQPMGVPPAQQMSRFDQPVPPPVGYP 209

[Close]

BLAST of CsaV3_4G005830 vs. TAIR10
Match: AT5G41390.1 (PLAC8 family protein)

HSP 1 Score: 368.2 bits (944), Expect = 3.9e-102
Identity = 172/216 (79.63%), Postives = 187/216 (86.57%), Query Frame = 0


Query: 1   MAMQQQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMS 60
           MA  Q  LDKMQLRQ+YRNLWH+DLM T+ ADT YC F+  CGPCVSYLLRKRALYNDMS
Sbjct: 1   MARSQDKLDKMQLRQSYRNLWHSDLMGTVSADTPYCFFSCLCGPCVSYLLRKRALYNDMS 60

Query: 61  RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII 120
           RY CC GYMPCSG+CGESKCP+FCL TEV LCFGNSVASTRF+LQDEFNI TT+CDNCII
Sbjct: 61  RYTCCGGYMPCSGKCGESKCPQFCLATEVCLCFGNSVASTRFMLQDEFNIHTTKCDNCII 120

Query: 121 GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG 180
           GFMFCL QIACIFS+VA IVGS+E+ EASQLLSCLADMVYC+VCACMQTQHKIEMDKRDG
Sbjct: 121 GFMFCLNQIACIFSLVACIVGSDELSEASQLLSCLADMVYCTVCACMQTQHKIEMDKRDG 180

Query: 181 VFGTQAMAVPPAQYMSRIDQPIPPSVGYPPQPAYGQ 217
           +   Q M+VPPAQ MSRIDQP+PP  GYPP   Y Q
Sbjct: 181 LISPQPMSVPPAQQMSRIDQPVPPYAGYPPATGYPQ 216

[Close]

BLAST of CsaV3_4G005830 vs. TAIR10
Match: AT4G23470.1 (PLAC8 family protein)

HSP 1 Score: 344.7 bits (883), Expect = 4.6e-95
Identity = 157/204 (76.96%), Postives = 178/204 (87.25%), Query Frame = 0


Query: 3   MQQQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMSRY 62
           M +Q ++KM+LR+N+RN+WHTDL  +IQ DT YCCFALWC PC SYLLRKRALY+DMSRY
Sbjct: 1   MPKQDMEKMELRKNFRNVWHTDLTHSIQNDTPYCCFALWCAPCASYLLRKRALYDDMSRY 60

Query: 63  VCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCIIGF 122
           VCCAGYMPCSGRCGE+KCP+ CL TEVF CF NSVASTRFLLQDEF IQTT+CDNCIIGF
Sbjct: 61  VCCAGYMPCSGRCGEAKCPQLCLATEVFCCFANSVASTRFLLQDEFQIQTTKCDNCIIGF 120

Query: 123 MFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDGVF 182
           M CL Q+ACIFSIVA IVG +E+ EASQ+L+C +DMVYC+VCACMQTQHK+EMDKRDG F
Sbjct: 121 MVCLSQVACIFSIVACIVGMDELSEASQILTCCSDMVYCTVCACMQTQHKMEMDKRDGKF 180

Query: 183 GTQAMAVPPAQYMSRIDQPIPPSV 207
           G Q MAVPPAQ MSR DQ  PP+V
Sbjct: 181 GPQPMAVPPAQQMSRFDQATPPAV 204

[Close]

BLAST of CsaV3_4G005830 vs. TrEMBL
Match: tr|A0A0A0KY45|A0A0A0KY45_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047880 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 1.1e-124
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MAMQQQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMS 60
           MAMQQQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMS
Sbjct: 1   MAMQQQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMS 60

Query: 61  RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII 120
           RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII
Sbjct: 61  RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII 120

Query: 121 GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG 180
           GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG
Sbjct: 121 GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG 180

Query: 181 VFGTQAMAVPPAQYMSRIDQPIPPSVGYPPQPAYGQ 217
           VFGTQAMAVPPAQYMSRIDQPIPPSVGYPPQPAYGQ
Sbjct: 181 VFGTQAMAVPPAQYMSRIDQPIPPSVGYPPQPAYGQ 216

[Close]

BLAST of CsaV3_4G005830 vs. TrEMBL
Match: tr|A0A1S3BU33|A0A1S3BU33_CUCME (uncharacterized protein LOC103493173 OS=Cucumis melo OX=3656 GN=LOC103493173 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 2.3e-117
Identity = 204/208 (98.08%), Postives = 205/208 (98.56%), Query Frame = 0


Query: 1   MAMQQQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMS 60
           MAMQQQHLDKMQLRQNYRNLWHTDLMRTIQADT YCCFALWCGPCVSYLLRKRALYNDMS
Sbjct: 1   MAMQQQHLDKMQLRQNYRNLWHTDLMRTIQADTPYCCFALWCGPCVSYLLRKRALYNDMS 60

Query: 61  RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII 120
           RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII
Sbjct: 61  RYVCCAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCII 120

Query: 121 GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG 180
           GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG
Sbjct: 121 GFMFCLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDG 180

Query: 181 VFGTQAMAVPPAQYMSRIDQPIPPSVGY 209
           +FG Q MAVPPAQYMSRIDQPIPPSVGY
Sbjct: 181 MFGPQVMAVPPAQYMSRIDQPIPPSVGY 208

[Close]

BLAST of CsaV3_4G005830 vs. TrEMBL
Match: tr|A0A2P2L579|A0A2P2L579_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 6.5e-112
Identity = 195/213 (91.55%), Postives = 201/213 (94.37%), Query Frame = 0


Query: 5   QQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMSRYVC 64
           Q HLDKMQLRQNYRNLWHTDLM +IQADT YCCFA WCGPCVSYLLRKRALYNDMSRYVC
Sbjct: 6   QDHLDKMQLRQNYRNLWHTDLMNSIQADTPYCCFAFWCGPCVSYLLRKRALYNDMSRYVC 65

Query: 65  CAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMF 124
           CAGY+PCSGRCGES+CPEFCL TEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMF
Sbjct: 66  CAGYLPCSGRCGESRCPEFCLATEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMF 125

Query: 125 CLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDGVFGT 184
           CLQQIACIFSIVA+IVGSEEIQEASQLLSCLADMVYC+VCACMQTQHKIEMDKRDG FG 
Sbjct: 126 CLQQIACIFSIVAMIVGSEEIQEASQLLSCLADMVYCTVCACMQTQHKIEMDKRDGKFGP 185

Query: 185 Q-AMAVPPAQYMSRIDQPIPPSVGYPPQPAYGQ 217
           Q  MAVPP Q MSRIDQP+PPSVGYPPQ AYGQ
Sbjct: 186 QPVMAVPPVQQMSRIDQPVPPSVGYPPQAAYGQ 218

[Close]

BLAST of CsaV3_4G005830 vs. TrEMBL
Match: tr|D7TV44|D7TV44_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0025g00130 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 1.9e-111
Identity = 191/212 (90.09%), Postives = 201/212 (94.81%), Query Frame = 0


Query: 5   QQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMSRYVC 64
           Q++LDKMQ RQN+RNLWHTDLM TIQADT YCCFA WC PCVSYLLRKRALYNDMSRYVC
Sbjct: 4   QEYLDKMQGRQNFRNLWHTDLMGTIQADTRYCCFAFWCAPCVSYLLRKRALYNDMSRYVC 63

Query: 65  CAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMF 124
           CAGYMPCSGRCGES+CPEFCLCTEV LCFGNSVASTRFLLQDEFNIQTT+CDNCIIGFMF
Sbjct: 64  CAGYMPCSGRCGESRCPEFCLCTEVLLCFGNSVASTRFLLQDEFNIQTTKCDNCIIGFMF 123

Query: 125 CLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDGVFGT 184
           CLQQIACIFSIVA+IVGS+EIQEASQLLSCLADMVYC+VCACMQTQHKIEMDKRDG+FG 
Sbjct: 124 CLQQIACIFSIVAMIVGSDEIQEASQLLSCLADMVYCTVCACMQTQHKIEMDKRDGMFGP 183

Query: 185 QAMAVPPAQYMSRIDQPIPPSVGYPPQPAYGQ 217
           Q MA+PP Q MSRIDQP PPSVGYPPQPAYGQ
Sbjct: 184 QPMAIPPLQQMSRIDQPFPPSVGYPPQPAYGQ 215

[Close]

BLAST of CsaV3_4G005830 vs. TrEMBL
Match: tr|A0A2I4H8R2|A0A2I4H8R2_9ROSI (uncharacterized protein LOC109014493 OS=Juglans regia OX=51240 GN=LOC109014493 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 2.5e-111
Identity = 194/213 (91.08%), Postives = 202/213 (94.84%), Query Frame = 0


Query: 5   QQHLDKMQLRQNYRNLWHTDLMRTIQADTSYCCFALWCGPCVSYLLRKRALYNDMSRYVC 64
           Q++LDKMQLRQN+RNLWH+DLM TIQADT YCCFALWC PC SYLLRKRALY+DMSRYVC
Sbjct: 4   QEYLDKMQLRQNFRNLWHSDLMGTIQADTPYCCFALWCAPCASYLLRKRALYDDMSRYVC 63

Query: 65  CAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDEFNIQTTQCDNCIIGFMF 124
           CAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQD+FNIQTTQCDNCIIGFMF
Sbjct: 64  CAGYMPCSGRCGESKCPEFCLCTEVFLCFGNSVASTRFLLQDQFNIQTTQCDNCIIGFMF 123

Query: 125 CLQQIACIFSIVALIVGSEEIQEASQLLSCLADMVYCSVCACMQTQHKIEMDKRDGVFGT 184
           CLQQIACIFSIVA+IVGSEEIQEASQLLSCLADMVYC+VCACMQTQHKIEMDKRDG FG 
Sbjct: 124 CLQQIACIFSIVAMIVGSEEIQEASQLLSCLADMVYCTVCACMQTQHKIEMDKRDGKFGP 183

Query: 185 Q-AMAVPPAQYMSRIDQPIPPSVGYPPQPAYGQ 217
           Q  MAVPP Q MSRIDQP PPSVGYPPQPAYGQ
Sbjct: 184 QPVMAVPPMQQMSRIDQPFPPSVGYPPQPAYGQ 216

The following BLAST results are available for this feature:

BLAST of CsaV3_4G005830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653175.1	1.7e-124	100.00	PREDICTED: uncharacterized protein LOC101209140 [Cucumis sativus] >XP_011653176....	[more]
XP_008452048.1	3.5e-117	98.08	PREDICTED: uncharacterized protein LOC103493173 [Cucumis melo] >XP_008452049.1 P...	[more]
XP_022982459.1	5.6e-115	93.49	uncharacterized protein LOC111481274 [Cucurbita maxima] >XP_022982467.1 uncharac...	[more]
XP_024031337.1	3.4e-112	92.02	uncharacterized protein LOC21406988 [Morus notabilis]	[more]
XP_021668381.1	2.9e-111	91.55	uncharacterized protein LOC110656106 [Hevea brasiliensis]	[more]

BLAST of CsaV3_4G005830 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G63830.2	2.1e-103	81.82	PLAC8 family protein	[more]
AT5G41390.1	3.9e-102	79.63	PLAC8 family protein	[more]
AT4G23470.1	4.6e-95	76.96	PLAC8 family protein	[more]

BLAST of CsaV3_4G005830 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_4G005830 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KY45\|A0A0A0KY45_CUCSA	1.1e-124	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047880 PE=4 SV=1	[more]
tr\|A0A1S3BU33\|A0A1S3BU33_CUCME	2.3e-117	98.08	uncharacterized protein LOC103493173 OS=Cucumis melo OX=3656 GN=LOC103493173 PE=...	[more]
tr\|A0A2P2L579\|A0A2P2L579_RHIMU	6.5e-112	91.55	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]
tr\|D7TV44\|D7TV44_VITVI	1.9e-111	90.09	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0025g00130 PE=4 SV=...	[more]
tr\|A0A2I4H8R2\|A0A2I4H8R2_9ROSI	2.5e-111	91.08	uncharacterized protein LOC109014493 OS=Juglans regia OX=51240 GN=LOC109014493 P...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G005830.1	CsaV3_4G005830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..246
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..246
None	No IPR available	PANTHER	PTHR31152:SF6	SUBFAMILY NOT NAMED	coord: 1..210
None	No IPR available	PANTHER	PTHR31152	FAMILY NOT NAMED	coord: 1..210

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G005830	CSPI04G05670	Wild cucumber (PI 183967)	cpicucB213
CsaV3_4G005830	Cucsa.106690	Cucumber (Gy14) v1	cgycucB134
CsaV3_4G005830	CmaCh04G007440	Cucurbita maxima (Rimu)	cmacucB0847
CsaV3_4G005830	Cp4.1LG01g06790	Cucurbita pepo (Zucchini)	cpecucB0497
CsaV3_4G005830	Cp4.1LG14g02080	Cucurbita pepo (Zucchini)	cpecucB0266
CsaV3_4G005830	CsGy4G005540	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G005830	Carg14141	Silver-seed gourd	carcucB0982
CsaV3_4G005830	Carg05726	Silver-seed gourd	carcucB1063
CsaV3_4G005830	Cla014610	Watermelon (97103) v1	cucwmB322
CsaV3_4G005830	MELO3C016368	Melon (DHL92) v3.5.1	cucmeB315
CsaV3_4G005830	ClCG07G008270	Watermelon (Charleston Gray)	cucwcgB344
CsaV3_4G005830	Lsi07G002700	Bottle gourd (USVL1VR-Ls)	cuclsiB322
CsaV3_4G005830	MELO3C016368.2	Melon (DHL92) v3.6.1	cucmedB307
CsaV3_4G005830	Cla97C07G135400	Watermelon (97103) v2	cucwmbB330
CsaV3_4G005830	Bhi01G001853	Wax gourd	cucwgoB372

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G005830	Cucurbita maxima (Rimu)	cmacucB0393
CsaV3_4G005830	Cucurbita moschata (Rifu)	cmocucB0388
CsaV3_4G005830	Cucurbita moschata (Rifu)	cmocucB0833
CsaV3_4G005830	Wax gourd	cucwgoB381