CsaV3_4G005510 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_4G005510
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr4 : 3670268 .. 3673173 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGTTAAGTTGCATCCATTCTTGCTAAATTTGTTACAATTTTAACCCTACCTTGTTTCAAATATTATTATGCAAAGTTCTCTGATGAGTTGAATGAATTATAAAATATAGGAACAAGTATGAAATTGATAAAGTTTTAGATAAAAAAAAACCATTAGAATATATTGTTTTGATGAAAGTATGAATTTTGAAGAGTTATTTGGAGAGTGGCCAATTGAAATATTATATAATACATAACAACGTTTAGTAGTCGGCGCTGCCGGACCGGAATGTTTGTAAAGGTCGGTCCTTTACAAATGTTCAAACAATGCATTCCTCTATCGTTGCTAAGCCCTTTTCACGTTTGTGTTTCCCTATTTTGATTTCCTCTCTTTCTGCTTTCAACTCCCCCACTACTACATTCTTCAATCCCTGTTCTTCTCAAGGTCTCTGCTACCTTGCCCACCAACTGTTCGATGAATTGCCTCAAACAGATATTCCTTCCCTTAATTCCCTTCTCACCTCCTATGTGCGTGGCTGTCGTCAATCTGACGCATGGTCTCTCTTCAGTCGAATGCACCGCTCCTTCTCTCCTCTCACTGCCCACACTCTCACCGCTGTCTTGGCTGCATGCTCCGCATTACCCACCTCCCAATATGGCCAACTAGTCCATGGGTTAATCATAAAAACAGGTGCGTATTCTGGGATTGTAACTAAAACTGCCATCTTGGACATGTACTCTAAATGTGGACTTCTTGATGACTCTGTTAAGGTCTTTGAAGAGATGGAAATGAGGGACGTGGTTGCTTGGAATTCGTTGTTATCTAGCTTTTTGAGGGAGGGTCTTGCTGAGGAAGCATTAAACGTGTTTGAAGAAATGAAGAGAGAGAAAGTGGAGTTTAGTGAGTTTACTTTGTGTTCTGTGCTTAAAGCTTGTGCTGCCTTGGAAGATTATCGTTTGGGTAAGCAAGTTCATGGGGTGGTTGTAGTGATGAACAGAGATATGCTTGTTTTGGGTACCGCCTTGGTTGATTTTTACTCTAGTGTTGGGTGTATTAGTGAAGCCGTGAAAGTTTACACTAGCTTAAATTGTAGAAAGGATGATATCATACTTAATTCTTTAATTTCTGGATGTGTTAGGAATAAAAGATATGAAGAGGCTTTTTCATTGATGAGCAAGATGAGACCTAATGCAATTGCACTAACAAGTGCCCTGCATGCTTGCTCTGAGAATTCAGATCTATGGATAGGGAAGCAAATTCACTGTGTTTCGGTTCGTCATGGTTTGACATCTAATACTCAATTGTGCAATATCTTGCTCGATATGTATGCTAAATGTGGGAAAGTTTTGAATGCTCGAGCAGTGTTCGATGGAATGTGTCATAAGAATGTAGTATCGTGGAGCAGCATGATTCAAACATACGGAAGTCATGGAGATGGGCTAAAAGCTTTTGAACTGTTCAAGATAATGGTAGAGGGAAGAACTGGAGTCTTGCCAAATTCAGTGACGTTCCTTTCTGTCTTATCTGCCTGTGGGCATTCAGGGTTGGTGCAGCAGGGACAAGAATGTTTTTATTTGGCGAAGGAGAAGTATAGCTCATGTCTAGGTCCAGAACACTATGCCTGCTTCATAGATGTATTAGGCCGAGCTGGTAAGATTGATGAAGTATGGAGTCTGTTTCATGATATGGAGATGTGTGGTGTTAAGATTACTTCAAAAATATGGGCAGCAGTACTTAATGCTTGTAATCACAACCAAGATGTTTCCAGGGGTGAGTTTGCTGCCAAAAAACTCCTTCAATTGGATCCGAACAAGGCAGGGAATTACGTGCTGGCATCAAATTTCTATGCGTCAATAGGAAAGTGGGATTCGGTGGATGAATTGAGGAGACTCATGAAAGCAAAAGGACTAAGGAAGCTGGAAAAAGCTCAGTCACTTCTTCTTGCTTCTAGTGCTGGATGAGAGAATTAGCTCATCTATAATGTGATAGCCAAAAGAAAGAGGGGCTTCTGATGTGGAAAAAGAAGAAACACCTTATCGTGGACTGAAGCATCAGGTTAAATGTCACTCATTGTTGATCAAGACTCTGCCTAAGGGCTCTAATTTAAACCTCAACGTTCCTTCAACGACTGTCATTTAAGATGTCAACAAACGTGTTCTGTGGCTGAAGCCTGAAGATCAGCAAATTTTGTAGCTTGCTATTTTTCTGGTATGTAAACTGCCTCAAATTGAATGTTTCTGAATATCTTGTTAAATTTTTTCCAATTTATTCTTATTATGTTATTGGGTGAGGACCAAAGTCGTGACCAAAATCAAATCGGGTAGGACTTGTAAAGAAACTTTGCTTGATGTTATTGTAGGTGTAAATTATTTTGTAGTGATATGAGACAAGTATCATCAACGCTAAAGTGGGGATGTGTAGTAATATATGGAGTGAATACTTTCAAACTTTCTACCTTGAAGTTTCAAGGTATCCCAGGAAGTGAAACCATTTCCTTTCTTTTCTATCGATCCATTGACATCCGTTCATTCATCTCTAGCTCACTAGATAACTGGGTGAGTTGCAAAAAGATATGCGGTTCCTGATGTAACCAAGTATTTTTCTTGATATAATTGGATCTTCTGCTAACTTGTCAATGAAAGCTCTTGGGTTAAGTGATTTAACAAAAATTAAATTTTCCCATAACTCATGGGAGTGTTGTAGTCTAGATTTCTGGACTCTTTGGGTTAGCAGTTGATGGTAACTTCCTGTTTGAACTGTTTGTTGGGGATATTTTAAGAGTTGTATTTGTCGTAAATTGTGAGAAGTGGAAAAAGGTAGCTTTGCCATATGTACATCCAACTCACTCTTTACTTTATACTTTGATAAAAATAAATAGCTTTCCAAAATCTATCAAATGTATATTCGTCCAAATAGCAAATCTGAT

mRNA sequence

ATGCATTCCTCTATCGTTGCTAAGCCCTTTTCACGTTTGTGTTTCCCTATTTTGATTTCCTCTCTTTCTGCTTTCAACTCCCCCACTACTACATTCTTCAATCCCTGTTCTTCTCAAGGTCTCTGCTACCTTGCCCACCAACTGTTCGATGAATTGCCTCAAACAGATATTCCTTCCCTTAATTCCCTTCTCACCTCCTATGTGCGTGGCTGTCGTCAATCTGACGCATGGTCTCTCTTCAGTCGAATGCACCGCTCCTTCTCTCCTCTCACTGCCCACACTCTCACCGCTGTCTTGGCTGCATGCTCCGCATTACCCACCTCCCAATATGGCCAACTAGTCCATGGGTTAATCATAAAAACAGGTGCGTATTCTGGGATTGTAACTAAAACTGCCATCTTGGACATGTACTCTAAATGTGGACTTCTTGATGACTCTGTTAAGGTCTTTGAAGAGATGGAAATGAGGGACGTGGTTGCTTGGAATTCGTTGTTATCTAGCTTTTTGAGGGAGGGTCTTGCTGAGGAAGCATTAAACGTGTTTGAAGAAATGAAGAGAGAGAAAGTGGAGTTTAGTGAGTTTACTTTGTGTTCTGTGCTTAAAGCTTGTGCTGCCTTGGAAGATTATCGTTTGGGTAAGCAAGTTCATGGGGTGGTTGTAGTGATGAACAGAGATATGCTTGTTTTGGGTACCGCCTTGGTTGATTTTTACTCTAGTGTTGGGTGTATTAGTGAAGCCGTGAAAGTTTACACTAGCTTAAATTGTAGAAAGGATGATATCATACTTAATTCTTTAATTTCTGGATGTGTTAGGAATAAAAGATATGAAGAGGCTTTTTCATTGATGAGCAAGATGAGACCTAATGCAATTGCACTAACAAGTGCCCTGCATGCTTGCTCTGAGAATTCAGATCTATGGATAGGGAAGCAAATTCACTGTGTTTCGGTTCGTCATGGTTTGACATCTAATACTCAATTGTGCAATATCTTGCTCGATATGTATGCTAAATGTGGGAAAGTTTTGAATGCTCGAGCAGTGTTCGATGGAATGTGTCATAAGAATGTAGTATCGTGGAGCAGCATGATTCAAACATACGGAAGTCATGGAGATGGGCTAAAAGCTTTTGAACTGTTCAAGATAATGGTAGAGGGAAGAACTGGAGTCTTGCCAAATTCAGTGACGTTCCTTTCTGTCTTATCTGCCTGTGGGCATTCAGGGTTGGTGCAGCAGGGACAAGAATGTTTTTATTTGGCGAAGGAGAAGTATAGCTCATGTCTAGGTCCAGAACACTATGCCTGCTTCATAGATGTATTAGGCCGAGCTGGTAAGATTGATGAAGTATGGAGTCTGTTTCATGATATGGAGATGTGTGGTGTTAAGATTACTTCAAAAATATGGGCAGCAGTACTTAATGCTTGTAATCACAACCAAGATGTTTCCAGGGGTGAGTTTGCTGCCAAAAAACTCCTTCAATTGGATCCGAACAAGGCAGGGAATTACGTGCTGGCATCAAATTTCTATGCGTCAATAGGAAAGTGGGATTCGGTGGATGAATTGAGGAGACTCATGAAAGCAAAAGGACTAAGGAAGCTGGAAAAAGCTCAGTCACTTCTTCTTGCTTCTAGTGCTGGATGA

Coding sequence (CDS)

ATGCATTCCTCTATCGTTGCTAAGCCCTTTTCACGTTTGTGTTTCCCTATTTTGATTTCCTCTCTTTCTGCTTTCAACTCCCCCACTACTACATTCTTCAATCCCTGTTCTTCTCAAGGTCTCTGCTACCTTGCCCACCAACTGTTCGATGAATTGCCTCAAACAGATATTCCTTCCCTTAATTCCCTTCTCACCTCCTATGTGCGTGGCTGTCGTCAATCTGACGCATGGTCTCTCTTCAGTCGAATGCACCGCTCCTTCTCTCCTCTCACTGCCCACACTCTCACCGCTGTCTTGGCTGCATGCTCCGCATTACCCACCTCCCAATATGGCCAACTAGTCCATGGGTTAATCATAAAAACAGGTGCGTATTCTGGGATTGTAACTAAAACTGCCATCTTGGACATGTACTCTAAATGTGGACTTCTTGATGACTCTGTTAAGGTCTTTGAAGAGATGGAAATGAGGGACGTGGTTGCTTGGAATTCGTTGTTATCTAGCTTTTTGAGGGAGGGTCTTGCTGAGGAAGCATTAAACGTGTTTGAAGAAATGAAGAGAGAGAAAGTGGAGTTTAGTGAGTTTACTTTGTGTTCTGTGCTTAAAGCTTGTGCTGCCTTGGAAGATTATCGTTTGGGTAAGCAAGTTCATGGGGTGGTTGTAGTGATGAACAGAGATATGCTTGTTTTGGGTACCGCCTTGGTTGATTTTTACTCTAGTGTTGGGTGTATTAGTGAAGCCGTGAAAGTTTACACTAGCTTAAATTGTAGAAAGGATGATATCATACTTAATTCTTTAATTTCTGGATGTGTTAGGAATAAAAGATATGAAGAGGCTTTTTCATTGATGAGCAAGATGAGACCTAATGCAATTGCACTAACAAGTGCCCTGCATGCTTGCTCTGAGAATTCAGATCTATGGATAGGGAAGCAAATTCACTGTGTTTCGGTTCGTCATGGTTTGACATCTAATACTCAATTGTGCAATATCTTGCTCGATATGTATGCTAAATGTGGGAAAGTTTTGAATGCTCGAGCAGTGTTCGATGGAATGTGTCATAAGAATGTAGTATCGTGGAGCAGCATGATTCAAACATACGGAAGTCATGGAGATGGGCTAAAAGCTTTTGAACTGTTCAAGATAATGGTAGAGGGAAGAACTGGAGTCTTGCCAAATTCAGTGACGTTCCTTTCTGTCTTATCTGCCTGTGGGCATTCAGGGTTGGTGCAGCAGGGACAAGAATGTTTTTATTTGGCGAAGGAGAAGTATAGCTCATGTCTAGGTCCAGAACACTATGCCTGCTTCATAGATGTATTAGGCCGAGCTGGTAAGATTGATGAAGTATGGAGTCTGTTTCATGATATGGAGATGTGTGGTGTTAAGATTACTTCAAAAATATGGGCAGCAGTACTTAATGCTTGTAATCACAACCAAGATGTTTCCAGGGGTGAGTTTGCTGCCAAAAAACTCCTTCAATTGGATCCGAACAAGGCAGGGAATTACGTGCTGGCATCAAATTTCTATGCGTCAATAGGAAAGTGGGATTCGGTGGATGAATTGAGGAGACTCATGAAAGCAAAAGGACTAAGGAAGCTGGAAAAAGCTCAGTCACTTCTTCTTGCTTCTAGTGCTGGATGA

Protein sequence

MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLLSSFLREGLAEEALNVFEEMKREKVEFSEFTLCSVLKACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVSRGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLASSAG
Homology
[Close]
BLAST of CsaV3_4G005510 vs. NCBI nr
Match: XP_004146551.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucumis sativus] >KGN53295.1 hypothetical protein Csa_4G046580 [Cucumis sativus])

HSP 1 Score: 993.4 bits (2567), Expect = 3.0e-286
Identity = 544/544 (100.00%), Postives = 544/544 (100.00%), Query Frame = 0 

Query: 1   MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL 60
           MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL
Sbjct: 1   MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL 60

Query: 61  NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK 120
           NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK
Sbjct: 61  NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK 120

Query: 121 TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXXXXXXXXXXXXXXXXXX 180
           TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240
           XXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240

Query: 241 GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS 300
           GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS
Sbjct: 241 GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS 300

Query: 301 ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS 360
           ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS
Sbjct: 301 ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS 360

Query: 361 MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420
           MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE
Sbjct: 361 MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420

Query: 421 KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS 480
           KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS
Sbjct: 421 KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS 480

Query: 481 RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA 540
           RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA
Sbjct: 481 RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA 540

Query: 541 SSAG 545
           SSAG
Sbjct: 541 SSAG 544

[Close]
BLAST of CsaV3_4G005510 vs. NCBI nr
Match: XP_008452095.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucumis melo] >XP_008452096.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucumis melo] >XP_008452097.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucumis melo] >XP_008452099.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucumis melo] >XP_016901139.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucumis melo] >XP_016901140.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucumis melo])

HSP 1 Score: 934.9 bits (2415), Expect = 1.3e-268
Identity = 492/544 (90.44%), Postives = 509/544 (93.57%), Query Frame = 0 

Query: 1   MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL 60
           M SS VAKPFSRLCFPILISSLSAFNSPTT+ FNPCSSQGLCYLAH LFDE PQTDIPSL
Sbjct: 1   MISSFVAKPFSRLCFPILISSLSAFNSPTTS-FNPCSSQGLCYLAHHLFDEFPQTDIPSL 60

Query: 61  NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK 120
           N  LTSYVR CRQSDAWSLF RMHRSFSPLTAHTLTAVLAACSALPTS+YG+LVHGLIIK
Sbjct: 61  NCRLTSYVRSCRQSDAWSLFCRMHRSFSPLTAHTLTAVLAACSALPTSEYGRLVHGLIIK 120

Query: 121 TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXXXXXXXXXXXXXXXXXX 180
           TGAY GIVTKTAILDMYSKCGLLDDSVKVFEEMEMRD     XXXXXXXXXXXXXXXXXX
Sbjct: 121 TGAYPGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240
           XXXXXX               ACAALED+RLGKQVHGVVVVMNRDMLVLGTALVDFYSSV
Sbjct: 181 XXXXXXEKMEFSEFTLCSVLKACAALEDFRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240

Query: 241 GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS 300
           GCISEA+KVYTSLNCRKDDI+LNSLISGCVRNKRYEEA SLMSKMRPNAIALTSALHACS
Sbjct: 241 GCISEAMKVYTSLNCRKDDIMLNSLISGCVRNKRYEEALSLMSKMRPNAIALTSALHACS 300

Query: 301 ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS 360
           ENSDLWIGKQIHCVS+R GLTSNTQLCNILLDMYAKCGKVLNAR VFDGMCHKNVVSWSS
Sbjct: 301 ENSDLWIGKQIHCVSIRRGLTSNTQLCNILLDMYAKCGKVLNARTVFDGMCHKNVVSWSS 360

Query: 361 MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420
           MIQTYGSHGDGLKAFELFK+MVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE
Sbjct: 361 MIQTYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420

Query: 421 KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS 480
           KYSSCLGPEHYACFIDVLGRAGKID+VWSLFHDME CGVK+TS+IWAAVLNAC+HNQDV+
Sbjct: 421 KYSSCLGPEHYACFIDVLGRAGKIDDVWSLFHDMETCGVKVTSEIWAAVLNACSHNQDVT 480

Query: 481 RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA 540
           RGEFAA+KLLQLDPNKAGN+VLASNFYASIGKWDSVDELRR+M AKGLRKLEKA+SLLLA
Sbjct: 481 RGEFAAQKLLQLDPNKAGNFVLASNFYASIGKWDSVDELRRIMNAKGLRKLEKARSLLLA 540

Query: 541 SSAG 545
           SSAG
Sbjct: 541 SSAG 543

[Close]
BLAST of CsaV3_4G005510 vs. NCBI nr
Match: XP_022984423.1 (pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 [Cucurbita maxima] >XP_022984424.1 pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 812.4 bits (2097), Expect = 9.4e-232
Identity = 453/539 (84.04%), Postives = 490/539 (90.91%), Query Frame = 0 

Query: 3   SSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSLNS 62
           S  V  PFSR C PI I S SA NS TT+ FNPC S+  C  AHQLFDELPQ DIPSL S
Sbjct: 8   SLYVTNPFSRFCLPISIPSFSALNSATTS-FNPCCSESFCSHAHQLFDELPQRDIPSLTS 67

Query: 63  LLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIKTG 122
           LLTSYVRG R SDAWSLF +MHRS SPLTAHTLTA LAACSALPTS YGQ VHGLIIKTG
Sbjct: 68  LLTSYVRGHRHSDAWSLFRQMHRSCSPLTAHTLTAALAACSALPTSDYGQQVHGLIIKTG 127

Query: 123 AYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXXXXXXXXXXXXXXXXXXXX 182
            YSGIVTKTAILDMYSKCGLLD SVKVFEEME++DXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 128 TYSGIVTKTAILDMYSKCGLLDHSVKVFEEMELKDXXXXXXXXXXXXXXXXXXXXXXXXX 187

Query: 183 XXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGC 242
           XXXXXXXXXXXXXXXXXXXACAAL+D++LGKQVHG+VVVM+RDMLVLGT+LVDFYSSVGC
Sbjct: 188 XXXXXXXXXXXXXXXXXXXACAALKDFQLGKQVHGMVVVMDRDMLVLGTSLVDFYSSVGC 247

Query: 243 ISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACSEN 302
           ISEA+KVYTSLNC KDDI+LNSLISGCV NK+YEEAFSLMSKMRPNAIALTSAL ACSEN
Sbjct: 248 ISEAMKVYTSLNCTKDDIMLNSLISGCVVNKKYEEAFSLMSKMRPNAIALTSALAACSEN 307

Query: 303 SDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSSMI 362
           SDLWIGKQIHC  VRHG+ SNTQLCN LLDMYAKCGK+ NAR VFD M H++VVSWSSMI
Sbjct: 308 SDLWIGKQIHCALVRHGMASNTQLCNTLLDMYAKCGKISNARIVFDEMRHRDVVSWSSMI 367

Query: 363 QTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKY 422
           Q YGSHGDGLKAFELFK+MV+G+TGVLPNSVTFLSVLSACGHSGLV+QGQECFYLAKE+Y
Sbjct: 368 QAYGSHGDGLKAFELFKMMVDGKTGVLPNSVTFLSVLSACGHSGLVEQGQECFYLAKERY 427

Query: 423 SSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVSRG 482
           SS LGPEHYACFID+LGRAGKI+EVWS+FHDMEMCGVKITSK+WAA+LNAC+HNQDVSRG
Sbjct: 428 SSYLGPEHYACFIDILGRAGKIEEVWSVFHDMEMCGVKITSKLWAALLNACSHNQDVSRG 487

Query: 483 EFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLAS 542
           EFAAK+LL+L+PNKAGN+VLASNFYASIGKW+SVDELRR+M  KGL K E   SL+ +S
Sbjct: 488 EFAAKRLLRLEPNKAGNFVLASNFYASIGKWNSVDELRRIMWEKGLSK-EAGNSLVSSS 544

[Close]
BLAST of CsaV3_4G005510 vs. NCBI nr
Match: XP_023552813.1 (pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023552814.1 pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023552815.1 pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023552816.1 pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 809.3 bits (2089), Expect = 8.0e-231
Identity = 452/539 (83.86%), Postives = 490/539 (90.91%), Query Frame = 0 

Query: 3   SSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSLNS 62
           S  V  PFSR C PI I SLSA NS TT+ FNPC S+  C LAHQLFDELP+ DIPSL S
Sbjct: 8   SLYVTNPFSRFCLPISIPSLSALNSATTS-FNPCCSESFCSLAHQLFDELPRRDIPSLTS 67

Query: 63  LLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIKTG 122
           LLTSYVRG R SDAWSLF +MHRS SPLTAHTLTA LAACSALPTS YGQ VHGLIIKTG
Sbjct: 68  LLTSYVRGHRHSDAWSLFRQMHRSCSPLTAHTLTAALAACSALPTSDYGQQVHGLIIKTG 127

Query: 123 AYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXXXXXXXXXXXXXXXXXXXX 182
            YSGIVTKTAILDMYSKCGLLD SV+VFEEME++DXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 128 TYSGIVTKTAILDMYSKCGLLDHSVQVFEEMELKDXXXXXXXXXXXXXXXXXXXXXXXXX 187

Query: 183 XXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGC 242
           XXXXXXXXXXXXXXXXXXXACA L+D++LGKQVHG+VVVM+RDMLVLGTALVDFYS+VGC
Sbjct: 188 XXXXXXXXXXXXXXXXXXXACAVLKDFQLGKQVHGMVVVMDRDMLVLGTALVDFYSTVGC 247

Query: 243 ISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACSEN 302
           ISEA+KVYTSL+C KDDI+LNSLISGCV NK+YEEAFSLMSKMRPNAIALTSAL ACSEN
Sbjct: 248 ISEAMKVYTSLDCIKDDIMLNSLISGCVVNKQYEEAFSLMSKMRPNAIALTSALAACSEN 307

Query: 303 SDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSSMI 362
           SDLWIGKQIHC  VRHG+TSNTQLCN LLDMYAKCGK+ NAR VFD M H++VVSWSSMI
Sbjct: 308 SDLWIGKQIHCALVRHGMTSNTQLCNTLLDMYAKCGKISNARIVFDEMRHRDVVSWSSMI 367

Query: 363 QTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKY 422
           Q YGSHGDGLKAFELFK+M++GRTGVLPNSVTFLSVLSACGHSGLV+QGQECFYLAKE+Y
Sbjct: 368 QAYGSHGDGLKAFELFKMMLDGRTGVLPNSVTFLSVLSACGHSGLVEQGQECFYLAKERY 427

Query: 423 SSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVSRG 482
           SS L PEHYACFID+LGRAGKI+EVWS+FHDMEMCGVKITSK+WAA+LNAC+HNQDVSRG
Sbjct: 428 SSYLAPEHYACFIDILGRAGKIEEVWSVFHDMEMCGVKITSKLWAALLNACSHNQDVSRG 487

Query: 483 EFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLAS 542
           EFAAK+LL+LDPNKAGN+VLASNFYASIGKWDSV ELRR+M  KGL K E   SL+ +S
Sbjct: 488 EFAAKRLLRLDPNKAGNFVLASNFYASIGKWDSVGELRRIMWEKGLSK-EAGNSLVSSS 544

[Close]
BLAST of CsaV3_4G005510 vs. NCBI nr
Match: XP_022929203.1 (pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 [Cucurbita moschata] >XP_022929204.1 pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 803.9 bits (2075), Expect = 3.4e-229
Identity = 450/539 (83.49%), Postives = 487/539 (90.35%), Query Frame = 0 

Query: 3   SSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSLNS 62
           S  V  PFSR C PI I SLSA NS TT+ FNPC S+  C LAHQLFDEL Q DIPSL S
Sbjct: 8   SLYVTNPFSRFCLPISIPSLSALNSVTTS-FNPCCSESFCSLAHQLFDELAQRDIPSLTS 67

Query: 63  LLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIKTG 122
           LL+SYVRG R SDAWSLF +MHRS SP+TAHTLTA LAACSAL TS YGQ VHGLIIKTG
Sbjct: 68  LLSSYVRGHRHSDAWSLFRQMHRSCSPVTAHTLTAALAACSALLTSDYGQQVHGLIIKTG 127

Query: 123 AYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXXXXXXXXXXXXXXXXXXXX 182
            YSGIVTKTAILDMYSKCGLLD SVKVFEEME++D XXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 128 TYSGIVTKTAILDMYSKCGLLDHSVKVFEEMELKDVXXXXXXXXXXXXXXXXXXXXXXXX 187

Query: 183 XXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSVGC 242
           XXXXXXXXXXXXXXXXXX ACAAL+D++LGKQVHG+VVVM+RDMLVLGTALVDFYSSVGC
Sbjct: 188 XXXXXXXXXXXXXXXXXXKACAALKDFQLGKQVHGMVVVMDRDMLVLGTALVDFYSSVGC 247

Query: 243 ISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACSEN 302
           ISEA+KVYTSL+C KDDI+LNSLISGC  NK+YEEAFSLMSKMRPNAIALTSAL ACSEN
Sbjct: 248 ISEAMKVYTSLDCIKDDIMLNSLISGCFVNKKYEEAFSLMSKMRPNAIALTSALAACSEN 307

Query: 303 SDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSSMI 362
           SDLWIGKQIHC  VRHG+TSNTQLCN LLDMYAKCGK+LNAR VFD M H++VVSWSSMI
Sbjct: 308 SDLWIGKQIHCALVRHGMTSNTQLCNTLLDMYAKCGKILNARIVFDEMRHRDVVSWSSMI 367

Query: 363 QTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKEKY 422
           Q YGSHGDGLKAFELFK+M++GRTGVLPNSVTFLSVLSACGHSGLV+QGQECFYLAKE+Y
Sbjct: 368 QAYGSHGDGLKAFELFKMMLDGRTGVLPNSVTFLSVLSACGHSGLVEQGQECFYLAKERY 427

Query: 423 SSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVSRG 482
           SS L PEHYACFID+LGRAGKI+EVWS+FHDMEM GVKITSK+WAA+LNAC+HNQDVSRG
Sbjct: 428 SSYLAPEHYACFIDILGRAGKIEEVWSVFHDMEMRGVKITSKLWAALLNACSHNQDVSRG 487

Query: 483 EFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLAS 542
           EFAAK+LL+LDPNKAGN+VLASNFYASIGKWDSVDELRR+M  KGL K E   SL+ +S
Sbjct: 488 EFAAKRLLRLDPNKAGNFVLASNFYASIGKWDSVDELRRIMWEKGLSK-EAGNSLVSSS 544

[Close]
BLAST of CsaV3_4G005510 vs. TAIR10
Match: AT5G66500.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 486.1 bits (1250), Expect = 2.8e-137
Identity = 244/488 (50.00%), Postives = 329/488 (67.42%), Query Frame = 0 

Query: 45  AHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSA 104
           A  LFDELPQ D+ SLNS L+S++R    +D  +LF ++HR+   L++HT T VL ACS 
Sbjct: 37  ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96

Query: 105 LPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXX 164
           L   + G+ VH L+IK GA +G ++KTA++DMYSK G L DSV+VFE +E +D       
Sbjct: 97  LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156

Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNR 224
                                                 CA+L+  + GKQVH +VVV  R
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216

Query: 225 DMLVLGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSK 284
           D++VLGTA++ FYSSVG I+EA+KVY SLN   D+++LNSLISGC+RN+ Y+EAF LMS+
Sbjct: 217 DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR 276

Query: 285 MRPNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNAR 344
            RPN   L+S+L  CS+NSDLWIGKQIHCV++R+G  S+++LCN L+DMY KCG+++ AR
Sbjct: 277 QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQAR 336

Query: 345 AVFDGMCHKNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGH 404
            +F  +  K+VVSW+SMI  Y  +GDG+KA E+F+ M E  +GVLPNSVTFL V+SAC H
Sbjct: 337 TIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAH 396

Query: 405 SGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHD-MEMCGVKITS 464
           +GLV++G+ECF + KEKY    G EHY CFID+L +AG+ +E+W L    ME     I  
Sbjct: 397 AGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPC 456

Query: 465 KIWAAVLNACNHNQDVSRGEFAAKKLL-QLDPNKAGNYVLASNFYASIGKWDSVDELRRL 524
            IW AVL+AC+ N D++RGE+ A++L+ +  P  A  YVL SNFYA++GKWD V+ELR  
Sbjct: 457 AIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGK 516

Query: 525 MKAKGLRK 531
           +K KGL K
Sbjct: 517 LKNKGLVK 524

[Close]
BLAST of CsaV3_4G005510 vs. TAIR10
Match: AT5G39350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 264.2 bits (674), Expect = 1.7e-70
Identity = 156/501 (31.14%), Postives = 249/501 (49.70%), Query Frame = 0 

Query: 40  GLCYLAHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVL 99
           G   +A  +FD +   D+ S N++++ Y R    +DA  +F  M      L   T+ ++L
Sbjct: 166 GKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSML 225

Query: 100 AACSALPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXX 159
             C  L   + G+ VH L+ +      I  K A+++MY KCG +D++  VF+ ME RD  
Sbjct: 226 PVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVI 285

Query: 160 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVV 219
                                                      C        GK +HG  
Sbjct: 286 TWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWA 345

Query: 220 VVMN-RDMLVLGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEA 279
           V       +++ T+L+  Y+    +    +V++  + +      +++I+GCV+N+   +A
Sbjct: 346 VRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS-KYHTGPWSAIIAGCVQNELVSDA 405

Query: 280 FSLMSKMR-----PNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDM 339
             L  +MR     PN   L S L A +  +DL     IHC   + G  S+      L+ +
Sbjct: 406 LGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHV 465

Query: 340 YAKCGKVLNARAVFDGMCH----KNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVL 399
           Y+KCG + +A  +F+G+      K+VV W ++I  YG HGDG  A ++F  MV  R+GV 
Sbjct: 466 YSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV--RSGVT 525

Query: 400 PNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWS 459
           PN +TF S L+AC HSGLV++G   F    E Y +     HY C +D+LGRAG++DE ++
Sbjct: 526 PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 585

Query: 460 LFHDMEMCGVKITSKIWAAVLNACNHNQDVSRGEFAAKKLLQLDPNKAGNYVLASNFYAS 519
           L   +     + TS +W A+L AC  +++V  GE AA KL +L+P   GNYVL +N YA+
Sbjct: 586 LITTIPF---EPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAA 645

Query: 520 IGKWDSVDELRRLMKAKGLRK 531
           +G+W  ++++R +M+  GLRK
Sbjct: 646 LGRWKDMEKVRSMMENVGLRK 660

[Close]
BLAST of CsaV3_4G005510 vs. TAIR10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 263.1 bits (671), Expect = 3.9e-70
Identity = 160/492 (32.52%), Postives = 252/492 (51.22%), Query Frame = 0 

Query: 45  AHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSA 104
           A ++FD +P+ D+ S N+++  Y +      A  +   M       +  T+ +VL A SA
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248

Query: 105 LPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXX 164
           L     G+ +HG  +++G  S +   TA++DMY+KCG L+ + ++F+ M  R+       
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308

Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNR 224
                                                ACA L D   G+ +H + V +  
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368

Query: 225 DMLV-LGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMS 284
           D  V +  +L+  Y     +  A  ++  L  R   +  N++I G  +N R  +A +  S
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR-TLVSWNAMILGFAQNGRPIDALNYFS 428

Query: 285 KMR-----PNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCG 344
           +MR     P+     S + A +E S     K IH V +R  L  N  +   L+DMYAKCG
Sbjct: 429 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 488

Query: 345 KVLNARAVFDGMCHKNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSV 404
            ++ AR +FD M  ++V +W++MI  YG+HG G  A ELF+ M +G   + PN VTFLSV
Sbjct: 489 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT--IKPNGVTFLSV 548

Query: 405 LSACGHSGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCG 464
           +SAC HSGLV+ G +CFY+ KE YS  L  +HY   +D+LGRAG+++E W     M    
Sbjct: 549 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP--- 608

Query: 465 VKITSKIWAAVLNACNHNQDVSRGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDE 524
           VK    ++ A+L AC  +++V+  E AA++L +L+P+  G +VL +N Y +   W+ V +
Sbjct: 609 VKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQ 668

Query: 525 LRRLMKAKGLRK 531
           +R  M  +GLRK
Sbjct: 669 VRVSMLRQGLRK 674

[Close]
BLAST of CsaV3_4G005510 vs. TAIR10
Match: AT1G56570.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 254.2 bits (648), Expect = 1.8e-67
Identity = 159/515 (30.87%), Postives = 259/515 (50.29%), Query Frame = 0 

Query: 39  QGLCYLAHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAV 98
           +GL   A  LFDE+P  D+ +  +++T Y      + AW  F  M +  +     TL++V
Sbjct: 58  KGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSV 117

Query: 99  LAACSALPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGL-LDDSVKVFEEMEMRD 158
           L +C  +    YG LVHG+++K G    +    A+++MY+ C + ++ +  +F ++++++
Sbjct: 118 LKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKN 177

Query: 159 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHG 218
                                                       A A+++    GKQ+H 
Sbjct: 178 DVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHA 237

Query: 219 VVVVMN-RDMLVLGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYE 278
            V+    +  L +  +++D Y   G +SEA   +  +   KD I  N+LIS   R+    
Sbjct: 238 SVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDLITWNTLISELERSDS-S 297

Query: 279 EAFSLMSKMR-----PNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILL 338
           EA  +  +       PN    TS + AC+  + L  G+Q+H    R G   N +L N L+
Sbjct: 298 EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALI 357

Query: 339 DMYAKCGKVLNARAVFDGMC-HKNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLP 398
           DMYAKCG + +++ VF  +   +N+VSW+SM+  YGSHG G +A ELF  MV   +G+ P
Sbjct: 358 DMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVS--SGIRP 417

Query: 399 NSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWSL 458
           + + F++VLSAC H+GLV++G + F + + +Y      + Y C +D+LGRAGKI E + L
Sbjct: 418 DRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYEL 477

Query: 459 FHDMEMCGVKITSKIWAAVLNAC---NHNQDVSRGEFAAKKLLQLDPNKAGNYVLASNFY 518
              +E    K     W A+L AC    HN  +SR   AA+K+++L P   G YV+ S  Y
Sbjct: 478 ---VERMPFKPDESTWGAILGACKAHKHNGLISR--LAARKVMELKPKMVGTYVMLSYIY 537

Query: 519 ASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLASS 543
           A+ GKW     +R++M+  G +K E   S +L  +
Sbjct: 538 AAEGKWVDFARVRKMMRMMGNKK-EAGMSWILVEN 562

[Close]
BLAST of CsaV3_4G005510 vs. TAIR10
Match: AT3G49142.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 252.7 bits (644), Expect = 5.2e-67
Identity = 157/491 (31.98%), Postives = 237/491 (48.27%), Query Frame = 0 

Query: 45  AHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSA 104
           A ++FDE+P+ ++  +N ++ SYV      +   +F  M         +T   VL ACS 
Sbjct: 93  ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSC 152

Query: 105 LPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXX 164
             T   G+ +HG   K G  S +     ++ MY KCG L ++  V +EM  RD       
Sbjct: 153 SGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD------- 212

Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNR 224
                                                 C  +E            V ++ 
Sbjct: 213 ---------------VVSWNSLVVGYAQNQRFDDALEVCREMES-----------VKISH 272

Query: 225 DMLVLGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSK 284
           D   + + L    ++       VK       +K  +  N +I   ++N    EA  L S+
Sbjct: 273 DAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSR 332

Query: 285 M-----RPNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGK 344
           M      P+A+++TS L AC + S L +GK+IH    R  L  N  L N L+DMYAKCG 
Sbjct: 333 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGC 392

Query: 345 VLNARAVFDGMCHKNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVL 404
           +  AR VF+ M  ++VVSW++MI  YG  G G  A  LF  + +  +G++P+S+ F++ L
Sbjct: 393 LEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQD--SGLVPDSIAFVTTL 452

Query: 405 SACGHSGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGV 464
           +AC H+GL+++G+ CF L  + Y      EH AC +D+LGRAGK+ E +    DM M   
Sbjct: 453 AACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSM--- 512

Query: 465 KITSKIWAAVLNACNHNQDVSRGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDEL 524
           +   ++W A+L AC  + D   G  AA KL QL P ++G YVL SN YA  G+W+ V  +
Sbjct: 513 EPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNI 545

Query: 525 RRLMKAKGLRK 531
           R +MK+KGL+K
Sbjct: 573 RNIMKSKGLKK 545

[Close]
BLAST of CsaV3_4G005510 vs. Swiss-Prot
Match: sp|Q9FJY9|PP448_ARATH (Pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E38 PE=2 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 5.1e-136
Identity = 244/488 (50.00%), Postives = 329/488 (67.42%), Query Frame = 0 

Query: 45  AHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSA 104
           A  LFDELPQ D+ SLNS L+S++R    +D  +LF ++HR+   L++HT T VL ACS 
Sbjct: 37  ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96

Query: 105 LPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXX 164
           L   + G+ VH L+IK GA +G ++KTA++DMYSK G L DSV+VFE +E +D       
Sbjct: 97  LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156

Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNR 224
                                                 CA+L+  + GKQVH +VVV  R
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216

Query: 225 DMLVLGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSK 284
           D++VLGTA++ FYSSVG I+EA+KVY SLN   D+++LNSLISGC+RN+ Y+EAF LMS+
Sbjct: 217 DLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSR 276

Query: 285 MRPNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNAR 344
            RPN   L+S+L  CS+NSDLWIGKQIHCV++R+G  S+++LCN L+DMY KCG+++ AR
Sbjct: 277 QRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQAR 336

Query: 345 AVFDGMCHKNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGH 404
            +F  +  K+VVSW+SMI  Y  +GDG+KA E+F+ M E  +GVLPNSVTFL V+SAC H
Sbjct: 337 TIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAH 396

Query: 405 SGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHD-MEMCGVKITS 464
           +GLV++G+ECF + KEKY    G EHY CFID+L +AG+ +E+W L    ME     I  
Sbjct: 397 AGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPC 456

Query: 465 KIWAAVLNACNHNQDVSRGEFAAKKLL-QLDPNKAGNYVLASNFYASIGKWDSVDELRRL 524
            IW AVL+AC+ N D++RGE+ A++L+ +  P  A  YVL SNFYA++GKWD V+ELR  
Sbjct: 457 AIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGK 516

Query: 525 MKAKGLRK 531
           +K KGL K
Sbjct: 517 LKNKGLVK 524

[Close]
BLAST of CsaV3_4G005510 vs. Swiss-Prot
Match: sp|Q9FLZ9|PP405_ARATH (Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E16 PE=2 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.1e-69
Identity = 156/501 (31.14%), Postives = 249/501 (49.70%), Query Frame = 0 

Query: 40  GLCYLAHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVL 99
           G   +A  +FD +   D+ S N++++ Y R    +DA  +F  M      L   T+ ++L
Sbjct: 166 GKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSML 225

Query: 100 AACSALPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXX 159
             C  L   + G+ VH L+ +      I  K A+++MY KCG +D++  VF+ ME RD  
Sbjct: 226 PVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVI 285

Query: 160 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVV 219
                                                      C        GK +HG  
Sbjct: 286 TWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWA 345

Query: 220 VVMN-RDMLVLGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEA 279
           V       +++ T+L+  Y+    +    +V++  + +      +++I+GCV+N+   +A
Sbjct: 346 VRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS-KYHTGPWSAIIAGCVQNELVSDA 405

Query: 280 FSLMSKMR-----PNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDM 339
             L  +MR     PN   L S L A +  +DL     IHC   + G  S+      L+ +
Sbjct: 406 LGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHV 465

Query: 340 YAKCGKVLNARAVFDGMCH----KNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVL 399
           Y+KCG + +A  +F+G+      K+VV W ++I  YG HGDG  A ++F  MV  R+GV 
Sbjct: 466 YSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV--RSGVT 525

Query: 400 PNSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWS 459
           PN +TF S L+AC HSGLV++G   F    E Y +     HY C +D+LGRAG++DE ++
Sbjct: 526 PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 585

Query: 460 LFHDMEMCGVKITSKIWAAVLNACNHNQDVSRGEFAAKKLLQLDPNKAGNYVLASNFYAS 519
           L   +     + TS +W A+L AC  +++V  GE AA KL +L+P   GNYVL +N YA+
Sbjct: 586 LITTIPF---EPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAA 645

Query: 520 IGKWDSVDELRRLMKAKGLRK 531
           +G+W  ++++R +M+  GLRK
Sbjct: 646 LGRWKDMEKVRSMMENVGLRK 660

[Close]
BLAST of CsaV3_4G005510 vs. Swiss-Prot
Match: sp|Q3E6Q1|PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.0e-69
Identity = 160/492 (32.52%), Postives = 252/492 (51.22%), Query Frame = 0 

Query: 45  AHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSA 104
           A ++FD +P+ D+ S N+++  Y +      A  +   M       +  T+ +VL A SA
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248

Query: 105 LPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXX 164
           L     G+ +HG  +++G  S +   TA++DMY+KCG L+ + ++F+ M  R+       
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308

Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNR 224
                                                ACA L D   G+ +H + V +  
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368

Query: 225 DMLV-LGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMS 284
           D  V +  +L+  Y     +  A  ++  L  R   +  N++I G  +N R  +A +  S
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR-TLVSWNAMILGFAQNGRPIDALNYFS 428

Query: 285 KMR-----PNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCG 344
           +MR     P+     S + A +E S     K IH V +R  L  N  +   L+DMYAKCG
Sbjct: 429 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCG 488

Query: 345 KVLNARAVFDGMCHKNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSV 404
            ++ AR +FD M  ++V +W++MI  YG+HG G  A ELF+ M +G   + PN VTFLSV
Sbjct: 489 AIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGT--IKPNGVTFLSV 548

Query: 405 LSACGHSGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCG 464
           +SAC HSGLV+ G +CFY+ KE YS  L  +HY   +D+LGRAG+++E W     M    
Sbjct: 549 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP--- 608

Query: 465 VKITSKIWAAVLNACNHNQDVSRGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDE 524
           VK    ++ A+L AC  +++V+  E AA++L +L+P+  G +VL +N Y +   W+ V +
Sbjct: 609 VKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQ 668

Query: 525 LRRLMKAKGLRK 531
           +R  M  +GLRK
Sbjct: 669 VRVSMLRQGLRK 674

[Close]
BLAST of CsaV3_4G005510 vs. Swiss-Prot
Match: sp|Q9FXA9|PPR83_ARATH (Putative pentatricopeptide repeat-containing protein At1g56570 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E64 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.2e-66
Identity = 159/515 (30.87%), Postives = 259/515 (50.29%), Query Frame = 0 

Query: 39  QGLCYLAHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAV 98
           +GL   A  LFDE+P  D+ +  +++T Y      + AW  F  M +  +     TL++V
Sbjct: 58  KGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSV 117

Query: 99  LAACSALPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGL-LDDSVKVFEEMEMRD 158
           L +C  +    YG LVHG+++K G    +    A+++MY+ C + ++ +  +F ++++++
Sbjct: 118 LKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKN 177

Query: 159 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHG 218
                                                       A A+++    GKQ+H 
Sbjct: 178 DVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHA 237

Query: 219 VVVVMN-RDMLVLGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYE 278
            V+    +  L +  +++D Y   G +SEA   +  +   KD I  N+LIS   R+    
Sbjct: 238 SVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKDLITWNTLISELERSDS-S 297

Query: 279 EAFSLMSKMR-----PNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILL 338
           EA  +  +       PN    TS + AC+  + L  G+Q+H    R G   N +L N L+
Sbjct: 298 EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALI 357

Query: 339 DMYAKCGKVLNARAVFDGMC-HKNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLP 398
           DMYAKCG + +++ VF  +   +N+VSW+SM+  YGSHG G +A ELF  MV   +G+ P
Sbjct: 358 DMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVS--SGIRP 417

Query: 399 NSVTFLSVLSACGHSGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWSL 458
           + + F++VLSAC H+GLV++G + F + + +Y      + Y C +D+LGRAGKI E + L
Sbjct: 418 DRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYEL 477

Query: 459 FHDMEMCGVKITSKIWAAVLNAC---NHNQDVSRGEFAAKKLLQLDPNKAGNYVLASNFY 518
              +E    K     W A+L AC    HN  +SR   AA+K+++L P   G YV+ S  Y
Sbjct: 478 ---VERMPFKPDESTWGAILGACKAHKHNGLISR--LAARKVMELKPKMVGTYVMLSYIY 537

Query: 519 ASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLASS 543
           A+ GKW     +R++M+  G +K E   S +L  +
Sbjct: 538 AAEGKWVDFARVRKMMRMMGNKK-EAGMSWILVEN 562

[Close]
BLAST of CsaV3_4G005510 vs. Swiss-Prot
Match: sp|P0C899|PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H77 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 9.4e-66
Identity = 157/491 (31.98%), Postives = 237/491 (48.27%), Query Frame = 0 

Query: 45  AHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSA 104
           A ++FDE+P+ ++  +N ++ SYV      +   +F  M         +T   VL ACS 
Sbjct: 93  ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSC 152

Query: 105 LPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXX 164
             T   G+ +HG   K G  S +     ++ MY KCG L ++  V +EM  RD       
Sbjct: 153 SGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRD------- 212

Query: 165 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNR 224
                                                 C  +E            V ++ 
Sbjct: 213 ---------------VVSWNSLVVGYAQNQRFDDALEVCREMES-----------VKISH 272

Query: 225 DMLVLGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSK 284
           D   + + L    ++       VK       +K  +  N +I   ++N    EA  L S+
Sbjct: 273 DAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSR 332

Query: 285 M-----RPNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGK 344
           M      P+A+++TS L AC + S L +GK+IH    R  L  N  L N L+DMYAKCG 
Sbjct: 333 MEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGC 392

Query: 345 VLNARAVFDGMCHKNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVL 404
           +  AR VF+ M  ++VVSW++MI  YG  G G  A  LF  + +  +G++P+S+ F++ L
Sbjct: 393 LEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQD--SGLVPDSIAFVTTL 452

Query: 405 SACGHSGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGV 464
           +AC H+GL+++G+ CF L  + Y      EH AC +D+LGRAGK+ E +    DM M   
Sbjct: 453 AACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSM--- 512

Query: 465 KITSKIWAAVLNACNHNQDVSRGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDEL 524
           +   ++W A+L AC  + D   G  AA KL QL P ++G YVL SN YA  G+W+ V  +
Sbjct: 513 EPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNI 545

Query: 525 RRLMKAKGLRK 531
           R +MK+KGL+K
Sbjct: 573 RNIMKSKGLKK 545

[Close]
BLAST of CsaV3_4G005510 vs. TrEMBL
Match: tr|A0A0A0KUI3|A0A0A0KUI3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046580 PE=4 SV=1)

HSP 1 Score: 993.4 bits (2567), Expect = 2.0e-286
Identity = 544/544 (100.00%), Postives = 544/544 (100.00%), Query Frame = 0 

Query: 1   MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL 60
           MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL
Sbjct: 1   MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL 60

Query: 61  NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK 120
           NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK
Sbjct: 61  NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK 120

Query: 121 TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXXXXXXXXXXXXXXXXXX 180
           TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240
           XXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240

Query: 241 GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS 300
           GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS
Sbjct: 241 GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS 300

Query: 301 ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS 360
           ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS
Sbjct: 301 ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS 360

Query: 361 MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420
           MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE
Sbjct: 361 MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420

Query: 421 KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS 480
           KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS
Sbjct: 421 KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS 480

Query: 481 RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA 540
           RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA
Sbjct: 481 RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA 540

Query: 541 SSAG 545
           SSAG
Sbjct: 541 SSAG 544

[Close]
BLAST of CsaV3_4G005510 vs. TrEMBL
Match: tr|A0A1S3BTV7|A0A1S3BTV7_CUCME (pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493206 PE=4 SV=1)

HSP 1 Score: 934.9 bits (2415), Expect = 8.3e-269
Identity = 492/544 (90.44%), Postives = 509/544 (93.57%), Query Frame = 0 

Query: 1   MHSSIVAKPFSRLCFPILISSLSAFNSPTTTFFNPCSSQGLCYLAHQLFDELPQTDIPSL 60
           M SS VAKPFSRLCFPILISSLSAFNSPTT+ FNPCSSQGLCYLAH LFDE PQTDIPSL
Sbjct: 1   MISSFVAKPFSRLCFPILISSLSAFNSPTTS-FNPCSSQGLCYLAHHLFDEFPQTDIPSL 60

Query: 61  NSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYGQLVHGLIIK 120
           N  LTSYVR CRQSDAWSLF RMHRSFSPLTAHTLTAVLAACSALPTS+YG+LVHGLIIK
Sbjct: 61  NCRLTSYVRSCRQSDAWSLFCRMHRSFSPLTAHTLTAVLAACSALPTSEYGRLVHGLIIK 120

Query: 121 TGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXXXXXXXXXXXXXXXXXX 180
           TGAY GIVTKTAILDMYSKCGLLDDSVKVFEEMEMRD     XXXXXXXXXXXXXXXXXX
Sbjct: 121 TGAYPGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240
           XXXXXX               ACAALED+RLGKQVHGVVVVMNRDMLVLGTALVDFYSSV
Sbjct: 181 XXXXXXEKMEFSEFTLCSVLKACAALEDFRLGKQVHGVVVVMNRDMLVLGTALVDFYSSV 240

Query: 241 GCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIALTSALHACS 300
           GCISEA+KVYTSLNCRKDDI+LNSLISGCVRNKRYEEA SLMSKMRPNAIALTSALHACS
Sbjct: 241 GCISEAMKVYTSLNCRKDDIMLNSLISGCVRNKRYEEALSLMSKMRPNAIALTSALHACS 300

Query: 301 ENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSS 360
           ENSDLWIGKQIHCVS+R GLTSNTQLCNILLDMYAKCGKVLNAR VFDGMCHKNVVSWSS
Sbjct: 301 ENSDLWIGKQIHCVSIRRGLTSNTQLCNILLDMYAKCGKVLNARTVFDGMCHKNVVSWSS 360

Query: 361 MIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420
           MIQTYGSHGDGLKAFELFK+MVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE
Sbjct: 361 MIQTYGSHGDGLKAFELFKMMVEGRTGVLPNSVTFLSVLSACGHSGLVQQGQECFYLAKE 420

Query: 421 KYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLNACNHNQDVS 480
           KYSSCLGPEHYACFIDVLGRAGKID+VWSLFHDME CGVK+TS+IWAAVLNAC+HNQDV+
Sbjct: 421 KYSSCLGPEHYACFIDVLGRAGKIDDVWSLFHDMETCGVKVTSEIWAAVLNACSHNQDVT 480

Query: 481 RGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRKLEKAQSLLLA 540
           RGEFAA+KLLQLDPNKAGN+VLASNFYASIGKWDSVDELRR+M AKGLRKLEKA+SLLLA
Sbjct: 481 RGEFAAQKLLQLDPNKAGNFVLASNFYASIGKWDSVDELRRIMNAKGLRKLEKARSLLLA 540

Query: 541 SSAG 545
           SSAG
Sbjct: 541 SSAG 543

[Close]
BLAST of CsaV3_4G005510 vs. TrEMBL
Match: tr|A0A251NC37|A0A251NC37_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G157700 PE=4 SV=1)

HSP 1 Score: 603.2 bits (1554), Expect = 5.8e-169
Identity = 298/495 (60.20%), Postives = 368/495 (74.34%), Query Frame = 0 

Query: 36  CSSQGLCYLAHQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTL 95
           C+ +GL    H LFDE  Q DI SLN+LL SY R  + S  W+LFS +HR+   L A+T 
Sbjct: 17  CNFKGL--HTHHLFDETSQRDIYSLNALLASYNRNGQFSTTWALFSCIHRAKPDLNAYTF 76

Query: 96  TAVLAACSALPTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEM 155
           T VL AC ALP  + G+ VHGL+IKTGA SG V KTA++DMYSK G L+DSV+ FEEME 
Sbjct: 77  TRVLGACRALPRPERGRQVHGLMIKTGAESGTVAKTAVIDMYSKYGYLEDSVRAFEEMEF 136

Query: 156 RDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQV 215
           +D                                            ACA+L     GKQV
Sbjct: 137 KDVVTWNALLSSFLRHGLAREALGAFEAMREERVEISEFTLCSLLKACASLRSSPQGKQV 196

Query: 216 HGVVVVMNRDMLVLGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRY 275
           HG+VVVM RDML+LGTAL+DFYS+VGCISEA+KV++ LN RKDD + NSL++GCVRNK+Y
Sbjct: 197 HGMVVVMGRDMLILGTALIDFYSAVGCISEAMKVFSGLNGRKDDAMFNSLVAGCVRNKKY 256

Query: 276 EEAFSLMSKMRPNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYA 335
           +EA S+MS M+PN IALTSAL ACSENS+LWIGKQIHCV++RHG TS+TQ+CN+LLDMYA
Sbjct: 257 KEALSIMSTMKPNVIALTSALAACSENSNLWIGKQIHCVAMRHGFTSDTQMCNVLLDMYA 316

Query: 336 KCGKVLNARAVFDGMCHKNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTF 395
           KCGK+ NAR++F+G+ +KNVVSW+SMI  YGSHG+GL+A +LFK M E R+ VLPNSVTF
Sbjct: 317 KCGKISNARSLFNGISNKNVVSWTSMIDAYGSHGNGLEALDLFKRMGEERSEVLPNSVTF 376

Query: 396 LSVLSACGHSGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDME 455
           L+VLSACGHSGLV+QG+ECF  A EKY   LGPEHY CFID+LGRAG+IDEVW +F DM 
Sbjct: 377 LAVLSACGHSGLVEQGRECFNSAPEKYGLDLGPEHYGCFIDMLGRAGQIDEVWCVFQDMV 436

Query: 456 MCGVKITSKIWAAVLNACNHNQDVSRGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDS 515
             G++ T+ +W+A+LNAC+HN DV+RGE AAK LL+L+PNK GN+VL SNFYA+IG+WDS
Sbjct: 437 EHGIRPTAAVWSALLNACSHNLDVTRGEVAAKHLLELEPNKPGNFVLVSNFYATIGRWDS 496

Query: 516 VDELRRLMKAKGLRK 531
           VD+LR +M+ KGL K
Sbjct: 497 VDQLRSIMEMKGLVK 509

[Close]
BLAST of CsaV3_4G005510 vs. TrEMBL
Match: tr|M5VW48|M5VW48_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa024755mg PE=4 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 1.7e-165
Identity = 290/479 (60.54%), Postives = 359/479 (74.95%), Query Frame = 0 

Query: 52  LPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPTSQYG 111
           +P  DI SLN+LL SY R  + S  W+LFS +HR+   L A+T T VL AC ALP  + G
Sbjct: 1   MPCLDIYSLNALLASYNRNGQFSTTWALFSCIHRAKPDLNAYTFTRVLGACRALPRPERG 60

Query: 112 QLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDXXXXXXXXXXXXXX 171
           + VHGL+IKTGA SG V KTA++DMYSK G L+DSV+ FEEME +D              
Sbjct: 61  RQVHGLMIKTGAESGTVAKTAVIDMYSKYGYLEDSVRAFEEMEFKDVVTWNALLSSFLRH 120

Query: 172 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNRDMLVLGT 231
                                         ACA+L     GKQVHG+VVVM RDML+LGT
Sbjct: 121 GLAREALGAFEAMREERVEISEFTLCSLLKACASLRSSPQGKQVHGMVVVMGRDMLILGT 180

Query: 232 ALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSKMRPNAIA 291
           AL+DFYS+VGCISEA+KV++ LN RKDD + NSL++GCVRNK+Y+EA S+MS M+PN IA
Sbjct: 181 ALIDFYSAVGCISEAMKVFSGLNGRKDDAMFNSLVAGCVRNKKYKEALSIMSTMKPNVIA 240

Query: 292 LTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMC 351
           LTSAL ACSENS+LWIGKQIHCV++RHG TS+TQ+CN+LLDMYAKCGK+ NAR++F+G+ 
Sbjct: 241 LTSALAACSENSNLWIGKQIHCVAMRHGFTSDTQMCNVLLDMYAKCGKISNARSLFNGIS 300

Query: 352 HKNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGHSGLVQQG 411
           +KNVVSW+SMI  YGSHG+GL+A +LFK M E R+ VLPNSVTFL+VLSACGHSGLV+QG
Sbjct: 301 NKNVVSWTSMIDAYGSHGNGLEALDLFKRMGEERSEVLPNSVTFLAVLSACGHSGLVEQG 360

Query: 412 QECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSKIWAAVLN 471
           +ECF  A EKY   LGPEHY CFID+LGRAG+IDEVW +F DM   G++ T+ +W+A+LN
Sbjct: 361 RECFNSAPEKYGLDLGPEHYGCFIDMLGRAGQIDEVWCVFQDMVEHGIRPTAAVWSALLN 420

Query: 472 ACNHNQDVSRGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMKAKGLRK 531
           AC+HN DV+RGE AAK LL+L+PNK GN+VL SNFYA+IG+WDSVD+LR +M+ KGL K
Sbjct: 421 ACSHNLDVTRGEVAAKHLLELEPNKPGNFVLVSNFYATIGRWDSVDQLRSIMEMKGLVK 479

[Close]
BLAST of CsaV3_4G005510 vs. TrEMBL
Match: tr|A0A2N9EPL8|A0A2N9EPL8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4431 PE=4 SV=1)

HSP 1 Score: 585.1 bits (1507), Expect = 1.6e-163
Identity = 290/486 (59.67%), Postives = 353/486 (72.63%), Query Frame = 0 

Query: 48  LFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSALPT 107
           +FDE P  D+ SLNSLL SYVR  +   +W+LF  MH + S L A+T T VL ACSAL +
Sbjct: 1   MFDETPHRDLYSLNSLLASYVRNGKALASWALFRDMHSTRSDLNAYTFTPVLGACSALSS 60

Query: 108 --SQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRD-XXXXXXX 167
              Q G+ VHGL+IKTG   G VTKTA++DMYSK G L DSVKVF+EME RD        
Sbjct: 61  LGPQRGKQVHGLMIKTGTEMGTVTKTALMDMYSKYGFLGDSVKVFDEMEFRDIVTWNALL 120

Query: 168 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACAALEDYRLGKQVHGVVVVMNR 227
                                                ACA L+ +R GKQVHG+VVVM R
Sbjct: 121 SSFLRVDGLAKEALGVFEAMRKEGMEVSEFTLCSVLKACALLKAFRQGKQVHGMVVVMGR 180

Query: 228 DMLVLGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLISGCVRNKRYEEAFSLMSK 287
           D++VLGTAL+DFYS+VGCI E +KV++SL+CRKDD++ NSLISGCVRN++YEEAFS+M  
Sbjct: 181 DLVVLGTALIDFYSAVGCIEEGIKVFSSLHCRKDDVMRNSLISGCVRNQKYEEAFSIMCM 240

Query: 288 MRPNAIALTSALHACSENSDLWIGKQIHCVSVRHGLTSNTQLCNILLDMYAKCGKVLNAR 347
           M+PN +ALTS L ACSENSDLWIGKQ+HCV++R G T +TQLCN+LLDMYAKCGK+  AR
Sbjct: 241 MKPNVVALTSTLAACSENSDLWIGKQVHCVALRQGFTFDTQLCNVLLDMYAKCGKIFEAR 300

Query: 348 AVFDGMCHKNVVSWSSMIQTYGSHGDGLKAFELFKIMVEGRTGVLPNSVTFLSVLSACGH 407
            +FDG+C+K+VVSW+SMI  YGSHG GL+A ELFK M +  +GVLPNSVTFL++LSACGH
Sbjct: 301 LLFDGICNKDVVSWTSMIDAYGSHGHGLEALELFKKMEDEGSGVLPNSVTFLNLLSACGH 360

Query: 408 SGLVQQGQECFYLAKEKYSSCLGPEHYACFIDVLGRAGKIDEVWSLFHDMEMCGVKITSK 467
           SGL++QG+ECF   +EKY    G EHYACFID+L R G I+EVW  +HDM   G   T+ 
Sbjct: 361 SGLMEQGRECFNSMREKYGLKPGTEHYACFIDILSRGGLIEEVWCSYHDMIKHGTTPTAA 420

Query: 468 IWAAVLNACNHNQDVSRGEFAAKKLLQLDPNKAGNYVLASNFYASIGKWDSVDELRRLMK 527
           +WAA+LNAC+HN DV RGEFAA  LLQL+PNKAGNYVL SNFYA+IG+WDSV+ELR +M 
Sbjct: 421 VWAALLNACSHNLDVKRGEFAANHLLQLEPNKAGNYVLISNFYAAIGRWDSVEELRSIMS 480

Query: 528 AKGLRK 531
            KGL K
Sbjct: 481 TKGLVK 486

The following BLAST results are available for this feature:
BLAST of CsaV3_4G005510 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146551.13.0e-286100.00PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial ... [more]
XP_008452095.11.3e-26890.44PREDICTED: pentatricopeptide repeat-containing protein At5g66500, mitochondrial ... [more]
XP_022984423.19.4e-23284.04pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 ... [more]
XP_023552813.18.0e-23183.86pentatricopeptide repeat-containing protein At5g66500, mitochondrial [Cucurbita ... [more]
XP_022929203.13.4e-22983.49pentatricopeptide repeat-containing protein At5g66500, mitochondrial isoform X1 ... [more]
BLAST of CsaV3_4G005510 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G66500.12.8e-13750.00Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G39350.11.7e-7031.14Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G11290.13.9e-7032.52Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G56570.11.8e-6730.87Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G49142.15.2e-6731.98Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CsaV3_4G005510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FJY9|PP448_ARATH5.1e-13650.00Pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Arabidop... [more]
sp|Q9FLZ9|PP405_ARATH3.1e-6931.14Pentatricopeptide repeat-containing protein At5g39350 OS=Arabidopsis thaliana OX... [more]
sp|Q3E6Q1|PPR32_ARATH7.0e-6932.52Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
sp|Q9FXA9|PPR83_ARATH3.2e-6630.87Putative pentatricopeptide repeat-containing protein At1g56570 OS=Arabidopsis th... [more]
sp|P0C899|PP271_ARATH9.4e-6631.98Putative pentatricopeptide repeat-containing protein At3g49142 OS=Arabidopsis th... [more]
BLAST of CsaV3_4G005510 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KUI3|A0A0A0KUI3_CUCSA2.0e-286100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046580 PE=4 SV=1[more]
tr|A0A1S3BTV7|A0A1S3BTV7_CUCME8.3e-26990.44pentatricopeptide repeat-containing protein At5g66500, mitochondrial OS=Cucumis ... [more]
tr|A0A251NC37|A0A251NC37_PRUPE5.8e-16960.20Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G157700 PE=4 SV=1[more]
tr|M5VW48|M5VW48_PRUPE1.7e-16560.54Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa024755mg PE=4 SV=1[more]
tr|A0A2N9EPL8|A0A2N9EPL8_FAGSY1.6e-16359.67Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4431 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G005510.1CsaV3_4G005510.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 20..114
e-value: 7.6E-9
score: 37.1
coord: 115..216
e-value: 1.9E-20
score: 74.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 288..384
e-value: 2.0E-8
score: 35.9
coord: 227..287
e-value: 3.0E-6
score: 28.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 386..540
e-value: 1.6E-18
score: 69.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 262..286
e-value: 1.3E-5
score: 25.0
coord: 431..459
e-value: 4.4E-4
score: 20.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 353..402
e-value: 1.0E-8
score: 35.1
coord: 157..204
e-value: 2.7E-13
score: 49.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 129..159
e-value: 0.0015
score: 16.5
coord: 431..462
e-value: 2.0E-6
score: 25.6
coord: 262..286
e-value: 2.3E-5
score: 22.3
coord: 159..190
e-value: 4.8E-7
score: 27.5
coord: 356..383
e-value: 0.0014
score: 16.6
coord: 327..355
e-value: 0.0012
score: 16.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 56..86
score: 8.122
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 258..292
score: 9.821
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 323..357
score: 9.054
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 391..421
score: 6.533
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 496..530
score: 6.248
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 358..388
score: 5.349
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 157..191
score: 12.156
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 427..461
score: 9.394
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 126..156
score: 8.342
NoneNo IPR availablePANTHERPTHR24015:SF260SUBFAMILY NOT NAMEDcoord: 53..536
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 53..536

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_4G005510CSPI04G05370Wild cucumber (PI 183967)cpicucB213
CsaV3_4G005510Cucsa.106430Cucumber (Gy14) v1cgycucB134
CsaV3_4G005510CmoCh16G006850Cucurbita moschata (Rifu)cmocucB0388
CsaV3_4G005510Cla014577Watermelon (97103) v1cucwmB322
CsaV3_4G005510ClCG07G008630Watermelon (Charleston Gray)cucwcgB344
CsaV3_4G005510Cla97C07G135670Watermelon (97103) v2cucwmbB330
CsaV3_4G005510Bhi01G001861Wax gourdcucwgoB381
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G005510Cucumber (Chinese Long) v3cuccucB083
CsaV3_4G005510Cucumber (Chinese Long) v3cuccucB118
CsaV3_4G005510Cucumber (Chinese Long) v3cuccucB181
CsaV3_4G005510Silver-seed gourdcarcucB0440
CsaV3_4G005510Silver-seed gourdcarcucB0982
CsaV3_4G005510Silver-seed gourdcarcucB1063
CsaV3_4G005510Cucumber (Gy14) v2cgybcucB171
CsaV3_4G005510Cucumber (Gy14) v2cgybcucB287
CsaV3_4G005510Cucurbita maxima (Rimu)cmacucB0393
CsaV3_4G005510Cucurbita maxima (Rimu)cmacucB0796
CsaV3_4G005510Cucurbita maxima (Rimu)cmacucB0847
CsaV3_4G005510Cucurbita moschata (Rifu)cmocucB0779
CsaV3_4G005510Cucurbita moschata (Rifu)cmocucB0833
CsaV3_4G005510Cucurbita pepo (Zucchini)cpecucB0089
CsaV3_4G005510Cucurbita pepo (Zucchini)cpecucB0266
CsaV3_4G005510Cucurbita pepo (Zucchini)cpecucB0497
CsaV3_4G005510Wild cucumber (PI 183967)cpicucB352
CsaV3_4G005510Bottle gourd (USVL1VR-Ls)cuclsiB276
CsaV3_4G005510Bottle gourd (USVL1VR-Ls)cuclsiB322
CsaV3_4G005510Melon (DHL92) v3.5.1cucmeB273
CsaV3_4G005510Melon (DHL92) v3.5.1cucmeB315
CsaV3_4G005510Melon (DHL92) v3.5.1cucmeB342
CsaV3_4G005510Melon (DHL92) v3.6.1cucmedB307
CsaV3_4G005510Melon (DHL92) v3.6.1cucmedB336
CsaV3_4G005510Watermelon (Charleston Gray)cucwcgB300
CsaV3_4G005510Watermelon (97103) v1cucwmB344
CsaV3_4G005510Watermelon (97103) v2cucwmbB271
CsaV3_4G005510Watermelon (97103) v2cucwmbB316
CsaV3_4G005510Wax gourdcucwgoB433