CsaV3_4G005350 (gene) Cucumber (Chinese Long) v3

NameCsaV3_4G005350
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr4 : 3537391 .. 3537681 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATGAAAAACATGCTGGGAAGAAGAAAAAACTTACCGACGGTGAACGAAAGAAATGCCTGGCGCTAGAAGTGGAAGAAAAGGGGATTTCGAGAGGAACGGGCGGTGGAAGTGAAAACCTTGAAGGGGAGAGAGGGTATCACAACGGCAAAACAGGGGGTAGTATAAGAGAGATGAGCGGCGGGAAAGGGGGGGAGGTGATGCAATGGCGGATGGCGGAAAGGAGGGATGTCGCAACCAAAATTGTGAGGCAGATGTTCCTCGATATTCTCATCGTTTTTCCTTCTCTTAA

mRNA sequence

TATAAGAGAGATGAGCGGCGGGAAAGGGGGGGAGGTGATGCAATGGCGGATGGCGGAAAGGAGGGATGTCGCAACCAAAATTGTGAGGCAGATGTTCCTCGATATTCTCATCGTTTTTCCTTCTCTTAA

Coding sequence (CDS)

TATAAGAGAGATGAGCGGCGGGAAAGGGGGGGAGGTGATGCAATGGCGGATGGCGGAAAGGAGGGATGTCGCAACCAAAATTGTGAGGCAGATGTTCCTCGATATTCTCATCGTTTTTCCTTCTCTTAA

Protein sequence

YKRDERRERGGGDAMADGGKEGCRNQNCEADVPRYSHRFSFS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_4G005350.1CsaV3_4G005350.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_4G005350Silver-seed gourdcarcucB0440
CsaV3_4G005350Silver-seed gourdcarcucB0982
CsaV3_4G005350Silver-seed gourdcarcucB1063
CsaV3_4G005350Cucumber (Gy14) v2cgybcucB171
CsaV3_4G005350Cucumber (Gy14) v2cgybcucB287
CsaV3_4G005350Cucumber (Gy14) v1cgycucB323
CsaV3_4G005350Cucurbita maxima (Rimu)cmacucB0393
CsaV3_4G005350Cucurbita maxima (Rimu)cmacucB0796
CsaV3_4G005350Cucurbita maxima (Rimu)cmacucB0847
CsaV3_4G005350Cucurbita moschata (Rifu)cmocucB0388
CsaV3_4G005350Cucurbita moschata (Rifu)cmocucB0779
CsaV3_4G005350Cucurbita moschata (Rifu)cmocucB0833
CsaV3_4G005350Cucurbita pepo (Zucchini)cpecucB0089
CsaV3_4G005350Cucurbita pepo (Zucchini)cpecucB0266
CsaV3_4G005350Cucurbita pepo (Zucchini)cpecucB0497
CsaV3_4G005350Wild cucumber (PI 183967)cpicucB213
CsaV3_4G005350Wild cucumber (PI 183967)cpicucB352
CsaV3_4G005350Bottle gourd (USVL1VR-Ls)cuclsiB276
CsaV3_4G005350Bottle gourd (USVL1VR-Ls)cuclsiB322
CsaV3_4G005350Melon (DHL92) v3.5.1cucmeB273
CsaV3_4G005350Melon (DHL92) v3.5.1cucmeB315
CsaV3_4G005350Melon (DHL92) v3.5.1cucmeB342
CsaV3_4G005350Melon (DHL92) v3.6.1cucmedB307
CsaV3_4G005350Melon (DHL92) v3.6.1cucmedB336
CsaV3_4G005350Watermelon (Charleston Gray)cucwcgB300
CsaV3_4G005350Watermelon (Charleston Gray)cucwcgB344
CsaV3_4G005350Watermelon (97103) v1cucwmB322
CsaV3_4G005350Watermelon (97103) v1cucwmB344
CsaV3_4G005350Watermelon (97103) v2cucwmbB271
CsaV3_4G005350Watermelon (97103) v2cucwmbB330
CsaV3_4G005350Wax gourdcucwgoB381
CsaV3_4G005350Cucumber (Chinese Long) v3cuccucB083
CsaV3_4G005350Cucumber (Chinese Long) v3cuccucB181