CsaV3_4G002590 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G002590
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Pentatricopeptide repeat
Location	chr4 : 1599781 .. 1606114 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTAGGGAAACTAGGTCTAAAATAAAAACTGCAAAAAAGGATGAATTCGATTCGGTTCGGACCGCTATCCGTGCTGAACCGAACTTGGGCCGGTCTGTTACGGGTGTTTTTTTGGCTGTTGATTCTGACGTTCATGCTCGTTTAATCTCAGGCTACATGGAGTTTTTCAGTGGGCTCATCTTCTGCAGGTGGGCAGTTTTCTCTTTTTTAGCTTGGACGAAGATGGTTATAGGGTATTTTTTCTTTCAATGGAAGCTCGATTTTACTGCTTTGTGGTCGTTGTCCTGTTTGGTTGAGCTGTTCTTTCTGCTTTCTGTAGTTACTTTTTAAACTTCTGTGTTCACGGGTTAGTCATATGAAGATGCTTGGAATTTGGATTCACGAAAACGCTTGCTATGTAACTGATTTATATGTATTTATGTGTTTGGATTTTGGAGAGAGATTCGTGTGTGAGAGTTCCAATTGTTTAGGGTTTCTGAATTGTGATTTTTCTGCTCTGAATTGTTGTGTATTTTGGTTTTGTACTGAAGTCTATAGGATATTTGAATGTAGCTTGTGAATATTAACCTATTAAGCTTGACATTTCTTGAAGATGATAATCTATGAGCTTTACTTTGACTTTTACATACTTACAAATTACAATGTAATTCAAATAATTCTCTCCGTTGAGTTTTTCAGTTAAGAAAGCCATGTGTCCTAAGTAGCCTTAAGAAGTAATCCTCCAAGAACAAAGAGTGTAAATTAGGAGGAAAACTCCTATTTATAGAATTTATTACAACATGGGATAAAAAGGAATTAACCTAGAATTTTACCCAATTAACCCTTATTTTTCTAAATGTTTCCTTTGCAATTCTTCACCATTTAGTTATTGACTATCCTTTAAGCTGGGAAAATTCATGAGTTTGGAATAATAGCTTATTGGTCGTTCCTTTGTGTTTTCAAGTCTCATGTTGGTGTATCCAAAGTTGGAATGAAGTTTTAAAACTAGATACTAACCTCTAGTTATGGCAGTCAAAGTTGTAAATCTAAAGTAAGTTCAACAAAGAAAAATTTCTTAGATGTTGCTTGCTTATCTAATTCGTAAATCTGGTGTCTTGATGGAAAAATACAGGCCCTGTTGGCATGCTTGGACTCAAGAAGGCCTTGATTGGAGTTTCAAGCAGACTAATCTTGTTGATTCCTTTGATTGGATTGGAAGTATGTAAGAGCTATCAGTAGATATGCTTCCACTGGATTTCACTTCATGGAGTTCAACGATAAGAAATCTTTGTCTAAATGCAAAACACCAAGAAGTTTTGTCCGTTTTTGTTCATAAGTTCCAATGCTCATCGGGGTTTAAACCTGATAACCACATTTTTGCTGCAATTTTCAAATCATGTGCTGCTCTTTTTGCTATCAACATAGGAAAGGCACTTCAAGGTTATGCAGTGAAACAGGGGGAAATAGCATGCCAGTCTGTGTACAAGGGATTACTGAACTTGTATGCCAGATGTGGTGCTTTCGATGAATGTTGGAAATTATTTGAACAATTGAATCATCGTGATGTTGTTACCTGGAACATAATCTTATCTGGGTATTGTAGGTCTCAAATACATGATACTAAGGCTATAAGATTGTTTGTTAAGATGCACGCAGAGGGGGAAGTGAAGCCAAGTGCTATTACAATTGCTAGCATTCTTCCAGTATGTTCTCGTGTGGGGAAAGGTGTTGTTGGGAAGAGTATACATTCTTTTGTTATGAAATCTGGATTGGACAGGGATACACTTGTTGGAAATGCTCTCATATCGATGTATGCCAAATCTGGGCAGCCATGGTACGATGCATATGCTGCATTTAACAGCATTATTCATAAAGATGTTGTTACATGGAATACTATAATATCGGCATTAGCAGAAAAGAATTTAATGTTTGATGCATTACAATTGTTTAGTCTGATGCTGGAAGAACCCATAGAGCCAAATTATATAACAATTGCATGTATTTTACCTGTTTGTGCTTCCTTCGGTAATAATGTTTCCTGTAGGTTTGGAAAAGAGATCCATGGTTATATACATCGTAGGACTGAATTGATAGAAGATATTTCTGTCTGCAATGCATTGATGAACCTTTATTTGAGGGTTGGACAGATGGAAGAAGCAGAGATTTTGTTCTCGCACCTGAAGCAGAGAGACTTGGTTTCGTGGAATACTCTAATTTCTGGATACTCATTGAATGACAAGTGGTTGGAAGCTGTAGATCATTTCTGCAAGTTACTATGCTTAGGAAGCGATCCAGATTCTGTAACTTTAATTAGTGTTTTACCTGCTTGTGCATACTCACAAAACTTGCGAATAGGGAAAATGATCCATGGCTATATTCTTCGTCATCCTGTCTTGAGCGAAGATTCAACAGTTGGAAATGCTTTAGTTAGCTTCTATACAAAATGTAATGACGTGAAATCAGCATTTCATTCATTTTCCTTGATTTCTAGTAAAGATTTGATATCTTGGAACTCTGTGCTTAATGCTTTTGCAGAGTTTGGGAACACCACTCAATTCCCGCGTCTTCTTCACTTAATGCTGCGGGAAAGATTCAAACCTGATCATTTTACCATCTTGAGTATAATCAATTTTTGCATTACAGTTTTAGGAGGGTGTAAAGTTAAGGAGGTCCATTGCTATTCAGTTAGAGCTTGTTTATTTGAAGCTGATTATGGTCCTACTATACTCAATGCTCTTCTCGATGCATATTCAAAATGTGGTATTATAGATTATGCGTTAAAGATTTTTGAAAGCTCATCAGGAAAAAGAAACTTGGTGACATGCAATTCAATGATTTCGTGCTATGTTAATTGTAAGTCACCCAATGATGCACTTACAATATTTTCTGGCATGTCTGAGACTGATCTTACCACCTGGAATCTAATGATACGGGTTTACGCTGAAAATAATTGTCCTCGTGATGCACTCGGTCTTTTCCGTAGGTTGCAGATTAAGGGTATGAAACCGGATGCAGTGAGTATTATGAGCCTCCTTCCCGTATGCAATGAATTAGCATCATTTCGCCTATTAAAAGAATGTCATGGATATTCATTTAGATCACGTTTTGAGGATGTATACTTGGACGGAGCTTTACTTGATGCATATGCAAAATGTGGAGCTGTGGATTGTGCTTATAAGCTTTTCGAATCAAGCTCTCAGAAGGATTTAGTTATGTTCACATCAATGATAAGTGGGTATGCCATACATGGAATGGGAGAGGAGGCACTCAAGGTTTTCACTAACATGCTCGAGTCTGGTGTTAAGCCGGATCATGTGGTCGTGACTTCCATTTTATCTGCTTGTAGTCATACTGGTCTTGTAGATCAAGGTTTGAACATATTTCATTCCATGGAAGAGGTTATTCATATCAAACCAACCATGGAACACTATGCTTGTGTGGTGGATCTCCTTGCACGAGGAGGCCGAATCAAAGATGCATATTCTTTTGTGATCGGGATGCCTATTCAGCCTGATGCTAATATATGGGGCACATTGTTAGGTGCCTGCAAGACTCACCATGAAGTGGAATTGGGCCTTGTTGTGGCAGAGCAACTGTTTGAAACTAAAGCTGATGATATAGGAAACTATGTAGTTATGTCTAACCTATATGCTGCAGATGCTAAATGGGATGGGGTTTTGGAGGTAAGAAAGCTGATGAAAGAGAAGGAATTAAAAAAGCCACCCGGTTGTAGTTGGATTGAAGTGGAAGGAGAGAAGAACTTTTTTTTAGCGGGAGACTCTTTGCATCCTCAAAGAAACATGATTTATAATCTGTTAAATACATTGCACCAGCAAATTAAAAGAACTGTTGATATAACTTGACGAGCAATTAAATTTTGATATGGTGTTTTGTGAAATAATGTTATTTATAGTGGCATTGTAGGTTGTCTCAATTCTTCCGTCTCCATTCAATTTATTCATTGTACATTACAATATATCCTATCGTCAAATCTCATTCTTCTTCCTGCAGTTCTGAAAAATCCTTAGCAAGATATTTGTAAGCCTTTTGCTCCTTACTCGGTGAGTTTCCAATTGAAATTTAAAAGTTGTTCTTTTAGTCGTGAAAGAATGAGATTCTAAAAGGAATTAAGAATAGGATGATGAATAAGATGTGCAAACATCACCAAAAGGGGTAATGCAAATTCATTATATCTATTTTGAAGATTATATCTATTTTGAAGATCGTAATATAATGTGTAACTCAATATTTACTTATGTTTTTTTCTTTAATTTCTTGAAATTTAGAGAAGGTATAATAGATACTCCTGTTGTTCATATGCTTTTAATTTTAAACATTGCTTTAATAAACTTACGTTATTTCACGCAAACAATTCCAAAGGTTATAAATTAATAAGAGAAACATACTTAGAACGATTTTGATCCATATATGTTCAATGCATTATTAGAGTTGATCACATGATAAATTATATAATTTAGGGAAAAACATGTTTTTAGTTCCTTCCAAGTTCAATTTTTTTAGCAAATTATTGTTTTTGTTTAAATTTCTACCTAATTCATATTTTGTTAGTTTATTTAAGTTTATCATGGACAAACTTTAACATTCATAAACAATGAAAAACTAAATTAAAAAATATTTTAAATATACAACAAAATAAAAAAATAAAAACAACGATTTTTTAGGTTAATGACTGAAAATGAACTTAGTGAACTTTAAGAACAAAGATCATGATTTTAAAAGTGCAAGCAACATAAGAATAATTCACTACCGATCAAAACGTTAATGATGAAATCATGTTATTCAACTAAAAAAAGGTTTGCCAATGGAATTAGGAAAATAAAACATATTAAAGTTTGTAGTACTTATTACATGGACTAAATTGAGTAATTATATAATTTATAGAATATAGTTCTTCAAAAGATTATTATAATTTTTTTTAAAAAAACTCATTAATTACTTGATCGACCCACACAATCATGTCCTAAGCTTAAAAAAAACAATGATTTAACATAATTGGAAAACAATGATCGAAACAACGGAAAGACCAAAGCACAAAACGGTTCTACTCGAAGACCACTCAAAGGAGGAGATCAAATAAAAGATTTTTTAACAGCAATTTGAACATTCAAACCTCTAATCTTTTAGTGTGAAGTTATAAACTTTATGCTAGTCGAATTTTAATATCAACCATTAAATAATGTATAGGCATGAGATGAAAAATTACAGGAAATCTCAAGTGACAAATGAGACAAATACAAGATAAAATCGACCATTTTTATCATATAATGTAAGGATTCTCTAAAGCAAATGCGTCACAAAATTGAAACTCGGTAAATACCAAATTGCCTCCCTTGCTACCATTTGTGTTCTATCAAAAGTACTACAGTATTATATAGAGTTGATCAATGTCACACCATTAGTTCCTACATTTTGGTGTCTCAACGAGGGGAGTTGTCAAACAAACTAATAAGCGATATAACATTATCGATTATAAATGTTTACATGTAGACATGAGTAAGGCTTACGAAAGATCAATAGAATTTCTTGAATAAAATGATAGACTAATTTTGGGTTTACTTATGTTATTTAGGTAGTTTATTTTCTCATAAAACGATTTCATCATCGTTAATAACCTAATTTATTTGAATTTGATTCTCGAAAATATTTTAGATTAAATTATAACTTGTATTTAATAGGTTTAAAATGTTTCTATTAGTAAAATATTCAAACTCTTAACTTTGTCACTAATACCAAAACACAAACAGTCTTTTATAAGTGTTTTTGATCCTGAAAACAAAGTTCCAAGAACTGGAAAAAAAAATTAACTTTTGAAAGCTTGGTTTCGTATTTTATAAAAGGATACCATTTTCAAATATATTTATTTGAAAATAAAGAAGAAAGACTATAACAAAAAATAGTAGTCAAACAAAACCTAAATTTAGACCATACTAAGAATAAAAAGTTAAATTTAGAAAAAATCATAACCATATAAAACTAAACCATATGCTTAAAATGGAGAGCAAACTTATTATAAATATCCAAAAGTTTTAACATCAAAATCAATCTCAACTTTCATCTCGTTGCATTTACTTTTGGTATAATGAGCATCTCAAAAGTAATTGTGTTTACCTTTATCCTCATTTTCTTGATTAGCATCGACATAACAAATGCAGCGAGAAAGGTTCCTCTTGACAAAAAGAAACTCGATGACGATGCAAGTCTAATTAATACTCAAGGAGTTGGAGGGTGTAATCCGATCTCTCGCTGCAGAGGAATTGGTATCAAAGATGAGATCATTAGAGACATTAAGAGAAGAGGGAGGACTAAAAGAAAGTCCCCTCCAAAAGCATAA

mRNA sequence

ATGTGTAGGGAAACTAGGTCTAAAATAAAAACTGCAAAAAAGGATGAATTCGATTCGGTTCGGACCGCTATCCGTGCTGAACCGAACTTGGGCCGGTCTGTTACGGGTGTTTTTTTGGCTGTTGATTCTGACGTTCATGCTCGTTTAATCTCAGGCTACATGGAGTTTTTCAGTGGGCTCATCTTCTGCAGGCCCTGTTGGCATGCTTGGACTCAAGAAGGCCTTGATTGGAGTTTCAAGCAGACTAATCTTGTTGATTCCTTTGATTGGATTGGAAGAAAGGCACTTCAAGGTTATGCAGTGAAACAGGGGGAAATAGCATGCCAGTCTGTGTACAAGGGATTACTGAACTTGTATGCCAGATGTGGTGCTTTCGATGAATGTTGGAAATTATTTGAACAATTGAATCATCGTGATGTTGTTACCTGGAACATAATCTTATCTGGGTATTGTAGGTCTCAAATACATGATACTAAGGCTATAAGATTGTTTGTTAAGATGCACGCAGAGGGGGAAGTGAAGCCAAGTGCTATTACAATTGCTAGCATTCTTCCAGTATGTTCTCGTGTGGGGAAAGGTGTTGTTGGGAAGAGTATACATTCTTTTGTTATGAAATCTGGATTGGACAGGGATACACTTGTTGGAAATGCTCTCATATCGATGTATGCCAAATCTGGGCAGCCATGGTACGATGCATATGCTGCATTTAACAGCATTATTCATAAAGATGTTGTTACATGGAATACTATAATATCGGCATTAGCAGAAAAGAATTTAATGTTTGATGCATTACAATTGTTTAGTCTGATGCTGGAAGAACCCATAGAGCCAAATTATATAACAATTGCATGTATTTTACCTGTTTGTGCTTCCTTCGGTAATAATGTTTCCTGTAGGTTTGGAAAAGAGATCCATGGTTATATACATCGTAGGACTGAATTGATAGAAGATATTTCTGTCTGCAATGCATTGATGAACCTTTATTTGAGGGTTGGACAGATGGAAGAAGCAGAGATTTTGTTCTCGCACCTGAAGCAGAGAGACTTGGTTTCGTGGAATACTCTAATTTCTGGATACTCATTGAATGACAAGTGGTTGGAAGCTGTAGATCATTTCTGCAAGTTACTATGCTTAGGAAGCGATCCAGATTCTGTAACTTTAATTAGTGTTTTACCTGCTTGTGCATACTCACAAAACTTGCGAATAGGGAAAATGATCCATGGCTATATTCTTCGTCATCCTGTCTTGAGCGAAGATTCAACAGTTGGAAATGCTTTAGTTAGCTTCTATACAAAATGTAATGACGTGAAATCAGCATTTCATTCATTTTCCTTGATTTCTAGTAAAGATTTGATATCTTGGAACTCTGTGCTTAATGCTTTTGCAGAGTTTGGGAACACCACTCAATTCCCGCGTCTTCTTCACTTAATGCTGCGGGAAAGATTCAAACCTGATCATTTTACCATCTTGAGTATAATCAATTTTTGCATTACAGTTTTAGGAGGGTGTAAAGTTAAGGAGGTCCATTGCTATTCAGTTAGAGCTTGTTTATTTGAAGCTGATTATGGTCCTACTATACTCAATGCTCTTCTCGATGCATATTCAAAATGTGGTATTATAGATTATGCGTTAAAGATTTTTGAAAGCTCATCAGGAAAAAGAAACTTGGTGACATGCAATTCAATGATTTCGTGCTATGTTAATTGTAAGTCACCCAATGATGCACTTACAATATTTTCTGGCATGTCTGAGACTGATCTTACCACCTGGAATCTAATGATACGGGTTTACGCTGAAAATAATTGTCCTCGTGATGCACTCGGTCTTTTCCGTAGGTTGCAGATTAAGGGTATGAAACCGGATGCATGGCATTGTAGGTTGTCTCAATTCTTCCGTCTCCATTCAATTTATTCATTGTACATTACAATATATCCTATCGTCAAATCTCATTCTTCTTCCTGCAGTTCTGAAAAATCCTTAGCAAGATATTTCATCGACATAACAAATGCAGCGAGAAAGGTTCCTCTTGACAAAAAGAAACTCGATGACGATGCAAGTCTAATTAATACTCAAGGAGTTGGAGGGTGTAATCCGATCTCTCGCTGCAGAGGAATTGGTATCAAAGATGAGATCATTAGAGACATTAAGAGAAGAGGGAGGACTAAAAGAAAGTCCCCTCCAAAAGCATAA

Coding sequence (CDS)

ATGTGTAGGGAAACTAGGTCTAAAATAAAAACTGCAAAAAAGGATGAATTCGATTCGGTTCGGACCGCTATCCGTGCTGAACCGAACTTGGGCCGGTCTGTTACGGGTGTTTTTTTGGCTGTTGATTCTGACGTTCATGCTCGTTTAATCTCAGGCTACATGGAGTTTTTCAGTGGGCTCATCTTCTGCAGGCCCTGTTGGCATGCTTGGACTCAAGAAGGCCTTGATTGGAGTTTCAAGCAGACTAATCTTGTTGATTCCTTTGATTGGATTGGAAGAAAGGCACTTCAAGGTTATGCAGTGAAACAGGGGGAAATAGCATGCCAGTCTGTGTACAAGGGATTACTGAACTTGTATGCCAGATGTGGTGCTTTCGATGAATGTTGGAAATTATTTGAACAATTGAATCATCGTGATGTTGTTACCTGGAACATAATCTTATCTGGGTATTGTAGGTCTCAAATACATGATACTAAGGCTATAAGATTGTTTGTTAAGATGCACGCAGAGGGGGAAGTGAAGCCAAGTGCTATTACAATTGCTAGCATTCTTCCAGTATGTTCTCGTGTGGGGAAAGGTGTTGTTGGGAAGAGTATACATTCTTTTGTTATGAAATCTGGATTGGACAGGGATACACTTGTTGGAAATGCTCTCATATCGATGTATGCCAAATCTGGGCAGCCATGGTACGATGCATATGCTGCATTTAACAGCATTATTCATAAAGATGTTGTTACATGGAATACTATAATATCGGCATTAGCAGAAAAGAATTTAATGTTTGATGCATTACAATTGTTTAGTCTGATGCTGGAAGAACCCATAGAGCCAAATTATATAACAATTGCATGTATTTTACCTGTTTGTGCTTCCTTCGGTAATAATGTTTCCTGTAGGTTTGGAAAAGAGATCCATGGTTATATACATCGTAGGACTGAATTGATAGAAGATATTTCTGTCTGCAATGCATTGATGAACCTTTATTTGAGGGTTGGACAGATGGAAGAAGCAGAGATTTTGTTCTCGCACCTGAAGCAGAGAGACTTGGTTTCGTGGAATACTCTAATTTCTGGATACTCATTGAATGACAAGTGGTTGGAAGCTGTAGATCATTTCTGCAAGTTACTATGCTTAGGAAGCGATCCAGATTCTGTAACTTTAATTAGTGTTTTACCTGCTTGTGCATACTCACAAAACTTGCGAATAGGGAAAATGATCCATGGCTATATTCTTCGTCATCCTGTCTTGAGCGAAGATTCAACAGTTGGAAATGCTTTAGTTAGCTTCTATACAAAATGTAATGACGTGAAATCAGCATTTCATTCATTTTCCTTGATTTCTAGTAAAGATTTGATATCTTGGAACTCTGTGCTTAATGCTTTTGCAGAGTTTGGGAACACCACTCAATTCCCGCGTCTTCTTCACTTAATGCTGCGGGAAAGATTCAAACCTGATCATTTTACCATCTTGAGTATAATCAATTTTTGCATTACAGTTTTAGGAGGGTGTAAAGTTAAGGAGGTCCATTGCTATTCAGTTAGAGCTTGTTTATTTGAAGCTGATTATGGTCCTACTATACTCAATGCTCTTCTCGATGCATATTCAAAATGTGGTATTATAGATTATGCGTTAAAGATTTTTGAAAGCTCATCAGGAAAAAGAAACTTGGTGACATGCAATTCAATGATTTCGTGCTATGTTAATTGTAAGTCACCCAATGATGCACTTACAATATTTTCTGGCATGTCTGAGACTGATCTTACCACCTGGAATCTAATGATACGGGTTTACGCTGAAAATAATTGTCCTCGTGATGCACTCGGTCTTTTCCGTAGGTTGCAGATTAAGGGTATGAAACCGGATGCATGGCATTGTAGGTTGTCTCAATTCTTCCGTCTCCATTCAATTTATTCATTGTACATTACAATATATCCTATCGTCAAATCTCATTCTTCTTCCTGCAGTTCTGAAAAATCCTTAGCAAGATATTTCATCGACATAACAAATGCAGCGAGAAAGGTTCCTCTTGACAAAAAGAAACTCGATGACGATGCAAGTCTAATTAATACTCAAGGAGTTGGAGGGTGTAATCCGATCTCTCGCTGCAGAGGAATTGGTATCAAAGATGAGATCATTAGAGACATTAAGAGAAGAGGGAGGACTAAAAGAAAGTCCCCTCCAAAAGCATAA

Protein sequence

MCRETRSKIKTAKKDEFDSVRTAIRAEPNLGRSVTGVFLAVDSDVHARLISGYMEFFSGLIFCRPCWHAWTQEGLDWSFKQTNLVDSFDWIGRKALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRSQIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLISWNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSVRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPNDALTIFSGMSETDLTTWNLMIRVYAENNCPRDALGLFRRLQIKGMKPDAWHCRLSQFFRLHSIYSLYITIYPIVKSHSSSCSSEKSLARYFIDITNAARKVPLDKKKLDDDASLINTQGVGGCNPISRCRGIGIKDEIIRDIKRRGRTKRKSPPKA

Homology

[Close]

BLAST of CsaV3_4G002590 vs. NCBI nr
Match: XP_004152312.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g08490 [Cucumis sativus] >KGN52999.1 hypothetical protein Csa_4G010980 [Cucumis sativus])

HSP 1 Score: 1011.9 bits (2615), Expect = 1.1e-291
Identity = 528/529 (99.81%), Postives = 528/529 (99.81%), Query Frame = 0


Query: 94  KALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRS 153
           KALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRS
Sbjct: 63  KALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRS 122

Query: 154 QIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL 213
           QIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL
Sbjct: 123 QIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL 182

Query: 214 VGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEE 273
           VGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEE
Sbjct: 183 VGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEE 242

Query: 274 PIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQ 333
           PIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQ
Sbjct: 243 PIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQ 302

Query: 334 MEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPA 393
           MEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPA
Sbjct: 303 MEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPA 362

Query: 394 CAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLIS 453
           CAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLIS
Sbjct: 363 CAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLIS 422

Query: 454 WNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSV 513
           WNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSV
Sbjct: 423 WNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSV 482

Query: 514 RACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPN 573
           RACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPN
Sbjct: 483 RACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPN 542

Query: 574 DALTIFSGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQIKGMKPDA 623
           DALTIFSGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LQIKGMKPDA
Sbjct: 543 DALTIFSGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQIKGMKPDA 591

[Close]

BLAST of CsaV3_4G002590 vs. NCBI nr
Match: XP_008454091.1 (PREDICTED: putative pentatricopeptide repeat-containing protein At5g08490 isoform X2 [Cucumis melo] >XP_008454092.1 PREDICTED: putative pentatricopeptide repeat-containing protein At5g08490 isoform X1 [Cucumis melo] >XP_016901555.1 PREDICTED: putative pentatricopeptide repeat-containing protein At5g08490 isoform X1 [Cucumis melo] >XP_016901556.1 PREDICTED: putative pentatricopeptide repeat-containing protein At5g08490 isoform X1 [Cucumis melo])

HSP 1 Score: 960.7 bits (2482), Expect = 2.9e-276
Identity = 502/529 (94.90%), Postives = 514/529 (97.16%), Query Frame = 0


Query: 94  KALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRS 153
           KALQGYAVKQGEIACQSVYKGLLNLYA+ GAFDECWKLFEQL+HRDVVTWNIILSGYCRS
Sbjct: 63  KALQGYAVKQGEIACQSVYKGLLNLYAKYGAFDECWKLFEQLDHRDVVTWNIILSGYCRS 122

Query: 154 QIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL 213
           QIHDTKAIRLFVKMHAEGEVK SAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL
Sbjct: 123 QIHDTKAIRLFVKMHAEGEVKASAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL 182

Query: 214 VGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEE 273
           VGNALISMYAKSGQP YDAYAAFNSIIHKDVVTWNTIISALAEKNLM DALQLFSLMLEE
Sbjct: 183 VGNALISMYAKSGQPQYDAYAAFNSIIHKDVVTWNTIISALAEKNLMSDALQLFSLMLEE 242

Query: 274 PIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQ 333
           PIEPNY+TIACILPVCASFGNNVSCRFGKEIHGYI RRTELIEDISVCNALMNLYLRVG+
Sbjct: 243 PIEPNYVTIACILPVCASFGNNVSCRFGKEIHGYIQRRTELIEDISVCNALMNLYLRVGK 302

Query: 334 MEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPA 393
           MEEAEILFSHLKQ+DLVSWNT+ISGYSLNDKWL+AVDHFCKLLCLG DPDSVTLISVLP+
Sbjct: 303 MEEAEILFSHLKQKDLVSWNTIISGYSLNDKWLDAVDHFCKLLCLGIDPDSVTLISVLPS 362

Query: 394 CAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLIS 453
           CAYSQN+ +GKMIHGYILRHP+LSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLIS
Sbjct: 363 CAYSQNMLMGKMIHGYILRHPILSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLIS 422

Query: 454 WNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSV 513
           WNSVLNAFAEFGNTTQF  LLHLMLRERFKPDHFTI SIINFCITVLGGCKVKEVHCYSV
Sbjct: 423 WNSVLNAFAEFGNTTQFLHLLHLMLRERFKPDHFTIFSIINFCITVLGGCKVKEVHCYSV 482

Query: 514 RACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPN 573
           RACLFE DYGPTILNALLDAYSKCG IDYALKIFESSSGKRNLVTCNSMISCYVNCKSPN
Sbjct: 483 RACLFEGDYGPTILNALLDAYSKCGFIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPN 542

Query: 574 DALTIFSGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQIKGMKPDA 623
           DALTIFSG XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  QI+GMKPDA
Sbjct: 543 DALTIFSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIEGMKPDA 591

[Close]

BLAST of CsaV3_4G002590 vs. NCBI nr
Match: XP_022979279.1 (putative pentatricopeptide repeat-containing protein At5g08490 [Cucurbita maxima])

HSP 1 Score: 854.4 bits (2206), Expect = 2.9e-244
Identity = 445/529 (84.12%), Postives = 485/529 (91.68%), Query Frame = 0


Query: 94  KALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRS 153
           K LQGY VKQGE+ACQSVYKGLLNLY +CGAFD+CWKLFEQL +RDVVTWNIILSGYCRS
Sbjct: 63  KTLQGYTVKQGELACQSVYKGLLNLYGKCGAFDDCWKLFEQLEYRDVVTWNIILSGYCRS 122

Query: 154 QIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL 213
           QIHDT+A+RLFVKMHAEGEVKPSAITIA+ILPVCSRVGKGVVG+SIHS +MK+GL+RDTL
Sbjct: 123 QIHDTRAMRLFVKMHAEGEVKPSAITIATILPVCSRVGKGVVGRSIHSHIMKTGLERDTL 182

Query: 214 VGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEE 273
           VGNALISMYAKSGQ   DAYAAFNSIIHKDVV+WN +ISALAEKNLMFDAL LF LML+E
Sbjct: 183 VGNALISMYAKSGQSQNDAYAAFNSIIHKDVVSWNAVISALAEKNLMFDALHLFRLMLKE 242

Query: 274 PIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQ 333
            IEPNY+TIACILPVCASFG +VS RFGKEIHGY+ RRTEL+EDI VCNALMNLYLRVGQ
Sbjct: 243 LIEPNYVTIACILPVCASFGKHVSYRFGKEIHGYVQRRTELMEDIFVCNALMNLYLRVGQ 302

Query: 334 MEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPA 393
           + EAEILF  +KQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLG + DS+TLISVLP+
Sbjct: 303 IREAEILFWRMKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGIEFDSITLISVLPS 362

Query: 394 CAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLIS 453
           CAYSQNL +GKMIHGYI+RHP+LSED TVGNAL++FYTKC D+KSAF SFS+IS KDLIS
Sbjct: 363 CAYSQNLGMGKMIHGYIIRHPILSEDLTVGNALINFYTKCYDIKSAFQSFSMISGKDLIS 422

Query: 454 WNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSV 513
           WNS+LNAFAEFGN TQF  LL  ML+E FKPDHFTILSII+FC+TVLGG  VKE HCYSV
Sbjct: 423 WNSMLNAFAEFGNHTQFLHLLGWMLQEGFKPDHFTILSIISFCVTVLGGRMVKETHCYSV 482

Query: 514 RACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPN 573
           +AC  E D GPTILNALLDAYSKCG IDYAL+IF  SSGKRNLVTCNSMISCYVNCKSP+
Sbjct: 483 KACFLEGDSGPTILNALLDAYSKCGNIDYALQIFAGSSGKRNLVTCNSMISCYVNCKSPS 542

Query: 574 DALTIFSGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQIKGMKPDA 623
           DAL++FSGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LQ +GMKPDA
Sbjct: 543 DALSVFSGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQNEGMKPDA 591

[Close]

BLAST of CsaV3_4G002590 vs. NCBI nr
Match: XP_022145856.1 (putative pentatricopeptide repeat-containing protein At5g08490 [Momordica charantia])

HSP 1 Score: 849.0 bits (2192), Expect = 1.2e-242
Identity = 440/528 (83.33%), Postives = 479/528 (90.72%), Query Frame = 0


Query: 94  KALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRS 153
           KALQGY VKQGE+ACQSVYKGLLNLYA+CG FD+CWKLFEQL+HRDVVTWNIILSGYC S
Sbjct: 63  KALQGYLVKQGELACQSVYKGLLNLYAKCGVFDDCWKLFEQLDHRDVVTWNIILSGYCGS 122

Query: 154 QIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL 213
           Q+HDT+A+RLFVKMH+EGEVKPSAITIA+ILPVC+RV +  VGKSIHS +MKSGL+RDTL
Sbjct: 123 QVHDTEAMRLFVKMHSEGEVKPSAITIATILPVCARVVQAGVGKSIHSHIMKSGLERDTL 182

Query: 214 VGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEE 273
           VGNALISMYAKSGQ  YDAYAAFNSIIHKDVV+WN IISALAEKNL+FD L+LF+LMLEE
Sbjct: 183 VGNALISMYAKSGQLQYDAYAAFNSIIHKDVVSWNAIISALAEKNLLFDVLRLFNLMLEE 242

Query: 274 PIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQ 333
           PIEPNY+TIA ILPVCASF  N+S RFG+EIHGY+HRRT L+EDISVCNALMNLYLRVGQ
Sbjct: 243 PIEPNYVTIASILPVCASFAKNISYRFGREIHGYVHRRTNLMEDISVCNALMNLYLRVGQ 302

Query: 334 MEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPA 393
           MEEAEILF ++KQRDLVSWNT+ISGYSLND+WLEAVD FCK L LG +PDSVTLIS LP+
Sbjct: 303 MEEAEILFRNMKQRDLVSWNTIISGYSLNDEWLEAVDLFCKFLSLGIEPDSVTLISALPS 362

Query: 394 CAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLIS 453
           CAYSQNLR+GKMIHGYILRHP+L EDS VGNALVSFY KC+DVKSAF SFSLIS KDLIS
Sbjct: 363 CAYSQNLRVGKMIHGYILRHPILREDSAVGNALVSFYAKCHDVKSAFESFSLISRKDLIS 422

Query: 454 WNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSV 513
           WNS+LNAFAE G+ T+F  LL  ML+ERFKPD FTILSII+FC+TV G  KVKE HCYSV
Sbjct: 423 WNSMLNAFAEPGHGTRFVHLLDWMLQERFKPDSFTILSIISFCVTVSGVWKVKETHCYSV 482

Query: 514 RACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPN 573
           RACLFE D  PT +NALLDAYSKCG IDYALKIFESSSGKRNLVTCNSMISCYVNCKSPN
Sbjct: 483 RACLFEGDSSPTTVNALLDAYSKCGNIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPN 542

Query: 574 DALTIFSGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQIKGMKPD 622
           DALTIFSGM    XXXXXXXXXXXXXXXXXXXXXXXX RLQ +GMKPD
Sbjct: 543 DALTIFSGMTETDXXXXXXXXXXXXXXXXXXXXXXXXRRLQTEGMKPD 590

[Close]

BLAST of CsaV3_4G002590 vs. NCBI nr
Match: XP_022955750.1 (putative pentatricopeptide repeat-containing protein At5g08490 [Cucurbita moschata] >XP_022955751.1 putative pentatricopeptide repeat-containing protein At5g08490 [Cucurbita moschata])

HSP 1 Score: 817.8 bits (2111), Expect = 3.0e-233
Identity = 395/471 (83.86%), Postives = 431/471 (91.51%), Query Frame = 0


Query: 94  KALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRS 153
           KALQGY VKQGE+ACQSVYKGLLNLYA+CGAFD+CWKLFEQL +RDVVTWNIILSGYCRS
Sbjct: 63  KALQGYTVKQGELACQSVYKGLLNLYAKCGAFDDCWKLFEQLEYRDVVTWNIILSGYCRS 122

Query: 154 QIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL 213
           QIHDT+A+RLFVKMHAEGEVKPSAITIA+ILPVCSRVG+GVVG+SIHS +MK+GL+RDTL
Sbjct: 123 QIHDTRAMRLFVKMHAEGEVKPSAITIATILPVCSRVGQGVVGRSIHSHIMKTGLERDTL 182

Query: 214 VGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEE 273
           VGNALISMYAKSG    D YAAFNSIIHKDVV+WN IISALAEKNLMFDAL LF+LML+E
Sbjct: 183 VGNALISMYAKSGHSQNDLYAAFNSIIHKDVVSWNAIISALAEKNLMFDALHLFNLMLKE 242

Query: 274 PIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQ 333
            IEPNY+TIACILPVCASFG +VS RFGKEIHGY+  RTEL+EDI VCNALMNLYLRVGQ
Sbjct: 243 LIEPNYVTIACILPVCASFGKHVSYRFGKEIHGYVQHRTELMEDIFVCNALMNLYLRVGQ 302

Query: 334 MEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPA 393
           +EEAEILF H+KQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLG + DSVTLISVLP+
Sbjct: 303 IEEAEILFWHMKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGIEFDSVTLISVLPS 362

Query: 394 CAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLIS 453
           CAYSQNL +GKMIHGYI+RHP+LSED TVGNAL++FYTKC D+KSAF SFS++S KDLIS
Sbjct: 363 CAYSQNLGMGKMIHGYIIRHPILSEDLTVGNALINFYTKCYDIKSAFQSFSMVSGKDLIS 422

Query: 454 WNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSV 513
           WNS+LNAFAEFGN TQF  LL  ML+E FKPDHFTILSII+FC+TVLGG  VKE HCYSV
Sbjct: 423 WNSMLNAFAEFGNHTQFLHLLGWMLQEGFKPDHFTILSIISFCVTVLGGRMVKETHCYSV 482

Query: 514 RACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMIS 565
           +AC  E D GPTILNALLDAYSKCG IDYALKIF  SSGKRNLVTCNSMIS
Sbjct: 483 KACFLEGDSGPTILNALLDAYSKCGNIDYALKIFAGSSGKRNLVTCNSMIS 533

[Close]

BLAST of CsaV3_4G002590 vs. TAIR10
Match: AT5G08490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 495.4 bits (1274), Expect = 6.2e-140
Identity = 250/495 (50.51%), Postives = 339/495 (68.48%), Query Frame = 0


Query: 89  DWIGRKALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILS 148
           D    +AL G   K G IAC  V K +LN+YA+C   D+C K+F Q++  D V WNI+L+
Sbjct: 36  DLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLT 95

Query: 149 GYCRSQIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGL 208
           G   S   +T  +R F  MH   E KPS++T A +LP+C R+G    GKS+HS+++K+GL
Sbjct: 96  GLSVSCGRET--MRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGL 155

Query: 209 DRDTLVGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFS 268
           ++DTLVGNAL+SMYAK G  + DAY AF+ I  KDVV+WN II+  +E N+M DA + F 
Sbjct: 156 EKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFC 215

Query: 269 LMLEEPIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLY 328
           LML+EP EPNY TIA +LPVCAS   N++CR G++IH Y+ +R+ L   + VCN+L++ Y
Sbjct: 216 LMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFY 275

Query: 329 LRVGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGS-DPDSVTL 388
           LRVG++EEA  LF+ +  +DLVSWN +I+GY+ N +W +A   F  L+  G   PDSVT+
Sbjct: 276 LRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTI 335

Query: 389 ISVLPACAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLIS 448
           IS+LP CA   +L  GK IH YILRH  L ED++VGNAL+SFY +  D  +A+ +FSL+S
Sbjct: 336 ISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMS 395

Query: 449 SKDLISWNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKE 508
           +KD+ISWN++L+AFA+     QF  LLH +L E    D  TILS++ FCI V G  KVKE
Sbjct: 396 TKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKE 455

Query: 509 VHCYSVRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYV 568
           VH YSV+A L   +  P + NALLDAY+KCG ++YA KIF   S +R LV+ NS++S YV
Sbjct: 456 VHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYV 515

Query: 569 NCKSPNDALTIFSGM 583
           N  S +DA  +F+ M
Sbjct: 516 NSGSHDDAQMLFTEM 528

[Close]

BLAST of CsaV3_4G002590 vs. TAIR10
Match: AT1G15510.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 230.7 bits (587), Expect = 2.9e-60
Identity = 139/452 (30.75%), Postives = 238/452 (52.65%), Query Frame = 0


Query: 116 LNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRSQIHDTKAIRLFVKMHAEGEVKP 175
           L ++ R G   + W +F +++ R++ +WN+++ GY +    D +A+ L+ +M   G VKP
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFD-EAMCLYHRMLWVGGVKP 195

Query: 176 SAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVGNALISMYAKSGQPWYDAYAA 235
              T   +L  C  +     GK +H  V++ G + D  V NALI+MY K G     A   
Sbjct: 196 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV-KSARLL 255

Query: 236 FNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPIEPNYITIACILPVCASFGNN 295
           F+ +  +D+++WN +IS   E  +  + L+LF  M    ++P+ +T+  ++  C   G+ 
Sbjct: 256 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDR 315

Query: 296 VSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQMEEAEILFSHLKQRDLVSWNTL 355
              R G++IH Y+   T    DISVCN+L  +YL  G   EAE LFS ++++D+VSW T+
Sbjct: 316 ---RLGRDIHAYV-ITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 375

Query: 356 ISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNLRIGKMIHGYILRHPV 415
           ISGY  N    +A+D +  +      PD +T+ +VL ACA   +L  G  +H   ++  +
Sbjct: 376 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 435

Query: 416 LSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLISWNSVLNAFAEFGNTTQFPRLLH 475
           +S    V N L++ Y+KC  +  A   F  I  K++ISW S++       N   F  L+ 
Sbjct: 436 ISY-VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRL--NNRCFEALIF 495

Query: 476 L-MLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSVRACLFEADYGPTILNALLDAY 535
           L  ++   +P+  T+ + +  C  +      KE+H + +R  +   D+ P   NALLD Y
Sbjct: 496 LRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP---NALLDMY 555

Query: 536 SKCGIIDYALKIFESSSGKRNLVTCNSMISCY 567
            +CG ++ A   F S   K+++ + N +++ Y
Sbjct: 556 VRCGRMNTAWSQFNSQ--KKDVTSWNILLTGY 573

[Close]

BLAST of CsaV3_4G002590 vs. TAIR10
Match: AT1G69350.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 223.0 bits (567), Expect = 5.9e-58
Identity = 144/487 (29.57%), Postives = 252/487 (51.75%), Query Frame = 0


Query: 96  LQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRSQI 155
           + G  +K G      +   LL +Y + G   +  K+F+ +  RD+V W+ ++S  C    
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSS-CLENG 182

Query: 156 HDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVG 215
              KA+R+F  M  +G V+P A+T+ S++  C+ +G   + +S+H  + +   D D  + 
Sbjct: 183 EVVKALRMFKCMVDDG-VEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLC 242

Query: 216 NALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPI 275
           N+L++MY+K G     +   F  I  K+ V+W  +IS+         AL+ FS M++  I
Sbjct: 243 NSLLTMYSKCGD-LLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 302

Query: 276 EPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQME 335
           EPN +T+  +L  C   G     R GK +HG+  RR       S+  AL+ LY   G++ 
Sbjct: 303 EPNLVTLYSVLSSCGLIG---LIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLS 362

Query: 336 EAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACA 395
           + E +   +  R++V+WN+LIS Y+     ++A+  F +++     PD+ TL S + AC 
Sbjct: 363 DCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACE 422

Query: 396 YSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLISWN 455
            +  + +GK IHG+++R  V   D  V N+L+  Y+K   V SA   F+ I  + +++WN
Sbjct: 423 NAGLVPLGKQIHGHVIRTDV--SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWN 482

Query: 456 SVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSVRA 515
           S+L  F++ GN+ +   L   M     + +  T L++I  C ++    K K VH   + +
Sbjct: 483 SMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS 542

Query: 516 CLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPNDA 575
            L +         AL+D Y+KCG ++ A  +F + S  R++V+ +SMI+ Y        A
Sbjct: 543 GLKDLFTD----TALIDMYAKCGDLNAAETVFRAMS-SRSIVSWSSMINAYGMHGRIGSA 596

Query: 576 LTIFSGM 583
           ++ F+ M
Sbjct: 603 ISTFNQM 596

[Close]

BLAST of CsaV3_4G002590 vs. TAIR10
Match: AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 222.6 bits (566), Expect = 7.8e-58
Identity = 136/472 (28.81%), Postives = 248/472 (52.54%), Query Frame = 0


Query: 111 VYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRSQIHDTKAIRLFVKMHAE 170
           V   L+  Y   G  D   KLF+++  +D V WN++L+GY +    D+  I+ F  M  +
Sbjct: 175 VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDS-VIKGFSVMRMD 234

Query: 171 GEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVGNALISMYAKSGQPWY 230
            ++ P+A+T   +L VC+      +G  +H  V+ SG+D +  + N+L+SMY+K G+ + 
Sbjct: 235 -QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR-FD 294

Query: 231 DAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPIEPNYITIACILPVCA 290
           DA   F  +   D VTWN +IS   +  LM ++L  F  M+   + P+ IT + +LP  +
Sbjct: 295 DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 354

Query: 291 SFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQMEEAEILFSHLKQRDLV 350
            F N   C   K+IH YI R + +  DI + +AL++ Y +   +  A+ +FS     D+V
Sbjct: 355 KFENLEYC---KQIHCYIMRHS-ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVV 414

Query: 351 SWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNLRIGKMIHGYI 410
            +  +ISGY  N  ++++++ F  L+ +   P+ +TL+S+LP       L++G+ +HG+I
Sbjct: 415 VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFI 474

Query: 411 LRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLISWNSVLNAFAEFGNTTQF 470
           ++         +G A++  Y KC  +  A+  F  +S +D++SWNS++   A+  N +  
Sbjct: 475 IKKG-FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 534

Query: 471 PRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSVRACLFEADYGPTILNAL 530
             +   M       D  +I + ++ C  +      K +H + ++  L    Y     + L
Sbjct: 535 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSE---STL 594

Query: 531 LDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPNDALTIFSGM 583
           +D Y+KCG +  A+ +F++   ++N+V+ NS+I+   N     D+L +F  M
Sbjct: 595 IDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLKDSLCLFHEM 634

[Close]

BLAST of CsaV3_4G002590 vs. TAIR10
Match: AT5G27110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 222.2 bits (565), Expect = 1.0e-57
Identity = 147/473 (31.08%), Postives = 244/473 (51.59%), Query Frame = 0


Query: 113 KGLLNLYARCGAFDECWKLFEQLNHR-DVVTWNIILSGYCR-SQIHDTKAIRLFVKMHAE 172
           K L+N+Y  C        +FE  + R DV  WN ++SGY + S  HDT  + +F ++   
Sbjct: 43  KSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDT--LEVFKRLLNC 102

Query: 173 GEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVGNALISMYAKSGQPWY 232
               P + T  +++     +G+  +G+ IH+ V+KSG   D +V ++L+ MYAK    + 
Sbjct: 103 SICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNL-FE 162

Query: 233 DAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPIEPNYITIACILPVCA 292
           ++   F+ +  +DV +WNT+IS   +      AL+LF  M     EPN +++   +  C+
Sbjct: 163 NSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACS 222

Query: 293 SFGNNVSCRFGKEIH-GYIHRRTELIEDISVCNALMNLYLRVGQMEEAEILFSHLKQRDL 352
                +    GKEIH   + +  EL E ++  +AL+++Y +   +E A  +F  + ++ L
Sbjct: 223 RL---LWLERGKEIHRKCVKKGFELDEYVN--SALVDMYGKCDCLEVAREVFQKMPRKSL 282

Query: 353 VSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNLRIGKMIHGY 412
           V+WN++I GY         V+   +++  G+ P   TL S+L AC+ S+NL  GK IHGY
Sbjct: 283 VAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGY 342

Query: 413 ILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLISWNSVLNAFAEFGNTTQ 472
           ++R  V++ D  V  +L+  Y KC +   A   FS        SWN +++++   GN  +
Sbjct: 343 VIR-SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFK 402

Query: 473 FPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSVRACLFEADYGPTILNA 532
              +   M+    KPD  T  S++  C  +    K K++H  S+     E D    +L+A
Sbjct: 403 AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIH-LSISESRLETD--ELLLSA 462

Query: 533 LLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPNDALTIFSGM 583
           LLD YSKCG    A +IF +S  K+++V+   MIS Y +   P +AL  F  M
Sbjct: 463 LLDMYSKCGNEKEAFRIF-NSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM 502

[Close]

BLAST of CsaV3_4G002590 vs. Swiss-Prot
Match: sp|Q9FNN9|PP370_ARATH (Putative pentatricopeptide repeat-containing protein At5g08490 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E32 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 1.1e-138
Identity = 250/495 (50.51%), Postives = 339/495 (68.48%), Query Frame = 0


Query: 89  DWIGRKALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILS 148
           D    +AL G   K G IAC  V K +LN+YA+C   D+C K+F Q++  D V WNI+L+
Sbjct: 36  DLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLT 95

Query: 149 GYCRSQIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGL 208
           G   S   +T  +R F  MH   E KPS++T A +LP+C R+G    GKS+HS+++K+GL
Sbjct: 96  GLSVSCGRET--MRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGL 155

Query: 209 DRDTLVGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFS 268
           ++DTLVGNAL+SMYAK G  + DAY AF+ I  KDVV+WN II+  +E N+M DA + F 
Sbjct: 156 EKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFC 215

Query: 269 LMLEEPIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLY 328
           LML+EP EPNY TIA +LPVCAS   N++CR G++IH Y+ +R+ L   + VCN+L++ Y
Sbjct: 216 LMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFY 275

Query: 329 LRVGQMEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGS-DPDSVTL 388
           LRVG++EEA  LF+ +  +DLVSWN +I+GY+ N +W +A   F  L+  G   PDSVT+
Sbjct: 276 LRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTI 335

Query: 389 ISVLPACAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLIS 448
           IS+LP CA   +L  GK IH YILRH  L ED++VGNAL+SFY +  D  +A+ +FSL+S
Sbjct: 336 ISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMS 395

Query: 449 SKDLISWNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKE 508
           +KD+ISWN++L+AFA+     QF  LLH +L E    D  TILS++ FCI V G  KVKE
Sbjct: 396 TKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKE 455

Query: 509 VHCYSVRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYV 568
           VH YSV+A L   +  P + NALLDAY+KCG ++YA KIF   S +R LV+ NS++S YV
Sbjct: 456 VHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYV 515

Query: 569 NCKSPNDALTIFSGM 583
           N  S +DA  +F+ M
Sbjct: 516 NSGSHDDAQMLFTEM 528

[Close]

BLAST of CsaV3_4G002590 vs. Swiss-Prot
Match: sp|Q9M9E2|PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H73 PE=1 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 5.1e-59
Identity = 139/452 (30.75%), Postives = 238/452 (52.65%), Query Frame = 0


Query: 116 LNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRSQIHDTKAIRLFVKMHAEGEVKP 175
           L ++ R G   + W +F +++ R++ +WN+++ GY +    D +A+ L+ +M   G VKP
Sbjct: 136 LAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFD-EAMCLYHRMLWVGGVKP 195

Query: 176 SAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVGNALISMYAKSGQPWYDAYAA 235
              T   +L  C  +     GK +H  V++ G + D  V NALI+MY K G     A   
Sbjct: 196 DVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV-KSARLL 255

Query: 236 FNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPIEPNYITIACILPVCASFGNN 295
           F+ +  +D+++WN +IS   E  +  + L+LF  M    ++P+ +T+  ++  C   G+ 
Sbjct: 256 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDR 315

Query: 296 VSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQMEEAEILFSHLKQRDLVSWNTL 355
              R G++IH Y+   T    DISVCN+L  +YL  G   EAE LFS ++++D+VSW T+
Sbjct: 316 ---RLGRDIHAYV-ITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 375

Query: 356 ISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNLRIGKMIHGYILRHPV 415
           ISGY  N    +A+D +  +      PD +T+ +VL ACA   +L  G  +H   ++  +
Sbjct: 376 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 435

Query: 416 LSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLISWNSVLNAFAEFGNTTQFPRLLH 475
           +S    V N L++ Y+KC  +  A   F  I  K++ISW S++       N   F  L+ 
Sbjct: 436 ISY-VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRL--NNRCFEALIF 495

Query: 476 L-MLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSVRACLFEADYGPTILNALLDAY 535
           L  ++   +P+  T+ + +  C  +      KE+H + +R  +   D+ P   NALLD Y
Sbjct: 496 LRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP---NALLDMY 555

Query: 536 SKCGIIDYALKIFESSSGKRNLVTCNSMISCY 567
            +CG ++ A   F S   K+++ + N +++ Y
Sbjct: 556 VRCGRMNTAWSQFNSQ--KKDVTSWNILLTGY 573

[Close]

BLAST of CsaV3_4G002590 vs. Swiss-Prot
Match: sp|Q9C507|PP111_ARATH (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E66 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.1e-56
Identity = 144/487 (29.57%), Postives = 252/487 (51.75%), Query Frame = 0


Query: 96  LQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRSQI 155
           + G  +K G      +   LL +Y + G   +  K+F+ +  RD+V W+ ++S  C    
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSS-CLENG 182

Query: 156 HDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVG 215
              KA+R+F  M  +G V+P A+T+ S++  C+ +G   + +S+H  + +   D D  + 
Sbjct: 183 EVVKALRMFKCMVDDG-VEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLC 242

Query: 216 NALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPI 275
           N+L++MY+K G     +   F  I  K+ V+W  +IS+         AL+ FS M++  I
Sbjct: 243 NSLLTMYSKCGD-LLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI 302

Query: 276 EPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQME 335
           EPN +T+  +L  C   G     R GK +HG+  RR       S+  AL+ LY   G++ 
Sbjct: 303 EPNLVTLYSVLSSCGLIG---LIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLS 362

Query: 336 EAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACA 395
           + E +   +  R++V+WN+LIS Y+     ++A+  F +++     PD+ TL S + AC 
Sbjct: 363 DCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACE 422

Query: 396 YSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLISWN 455
            +  + +GK IHG+++R  V   D  V N+L+  Y+K   V SA   F+ I  + +++WN
Sbjct: 423 NAGLVPLGKQIHGHVIRTDV--SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWN 482

Query: 456 SVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSVRA 515
           S+L  F++ GN+ +   L   M     + +  T L++I  C ++    K K VH   + +
Sbjct: 483 SMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS 542

Query: 516 CLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPNDA 575
            L +         AL+D Y+KCG ++ A  +F + S  R++V+ +SMI+ Y        A
Sbjct: 543 GLKDLFTD----TALIDMYAKCGDLNAAETVFRAMS-SRSIVSWSSMINAYGMHGRIGSA 596

Query: 576 LTIFSGM 583
           ++ F+ M
Sbjct: 603 ISTFNQM 596

[Close]

BLAST of CsaV3_4G002590 vs. Swiss-Prot
Match: sp|Q9STE1|PP333_ARATH (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.4e-56
Identity = 136/472 (28.81%), Postives = 248/472 (52.54%), Query Frame = 0


Query: 111 VYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRSQIHDTKAIRLFVKMHAE 170
           V   L+  Y   G  D   KLF+++  +D V WN++L+GY +    D+  I+ F  M  +
Sbjct: 175 VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDS-VIKGFSVMRMD 234

Query: 171 GEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVGNALISMYAKSGQPWY 230
            ++ P+A+T   +L VC+      +G  +H  V+ SG+D +  + N+L+SMY+K G+ + 
Sbjct: 235 -QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR-FD 294

Query: 231 DAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPIEPNYITIACILPVCA 290
           DA   F  +   D VTWN +IS   +  LM ++L  F  M+   + P+ IT + +LP  +
Sbjct: 295 DASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVS 354

Query: 291 SFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQMEEAEILFSHLKQRDLV 350
            F N   C   K+IH YI R + +  DI + +AL++ Y +   +  A+ +FS     D+V
Sbjct: 355 KFENLEYC---KQIHCYIMRHS-ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVV 414

Query: 351 SWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNLRIGKMIHGYI 410
            +  +ISGY  N  ++++++ F  L+ +   P+ +TL+S+LP       L++G+ +HG+I
Sbjct: 415 VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFI 474

Query: 411 LRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLISWNSVLNAFAEFGNTTQF 470
           ++         +G A++  Y KC  +  A+  F  +S +D++SWNS++   A+  N +  
Sbjct: 475 IKKG-FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAA 534

Query: 471 PRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSVRACLFEADYGPTILNAL 530
             +   M       D  +I + ++ C  +      K +H + ++  L    Y     + L
Sbjct: 535 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSE---STL 594

Query: 531 LDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPNDALTIFSGM 583
           +D Y+KCG +  A+ +F++   ++N+V+ NS+I+   N     D+L +F  M
Sbjct: 595 IDMYAKCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLKDSLCLFHEM 634

[Close]

BLAST of CsaV3_4G002590 vs. Swiss-Prot
Match: sp|O04659|PP398_ARATH (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E14 PE=2 SV=2)

HSP 1 Score: 222.2 bits (565), Expect = 1.8e-56
Identity = 147/473 (31.08%), Postives = 244/473 (51.59%), Query Frame = 0


Query: 113 KGLLNLYARCGAFDECWKLFEQLNHR-DVVTWNIILSGYCR-SQIHDTKAIRLFVKMHAE 172
           K L+N+Y  C        +FE  + R DV  WN ++SGY + S  HDT  + +F ++   
Sbjct: 43  KSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDT--LEVFKRLLNC 102

Query: 173 GEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTLVGNALISMYAKSGQPWY 232
               P + T  +++     +G+  +G+ IH+ V+KSG   D +V ++L+ MYAK    + 
Sbjct: 103 SICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNL-FE 162

Query: 233 DAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEEPIEPNYITIACILPVCA 292
           ++   F+ +  +DV +WNT+IS   +      AL+LF  M     EPN +++   +  C+
Sbjct: 163 NSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACS 222

Query: 293 SFGNNVSCRFGKEIH-GYIHRRTELIEDISVCNALMNLYLRVGQMEEAEILFSHLKQRDL 352
                +    GKEIH   + +  EL E ++  +AL+++Y +   +E A  +F  + ++ L
Sbjct: 223 RL---LWLERGKEIHRKCVKKGFELDEYVN--SALVDMYGKCDCLEVAREVFQKMPRKSL 282

Query: 353 VSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPACAYSQNLRIGKMIHGY 412
           V+WN++I GY         V+   +++  G+ P   TL S+L AC+ S+NL  GK IHGY
Sbjct: 283 VAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGY 342

Query: 413 ILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLISWNSVLNAFAEFGNTTQ 472
           ++R  V++ D  V  +L+  Y KC +   A   FS        SWN +++++   GN  +
Sbjct: 343 VIR-SVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFK 402

Query: 473 FPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSVRACLFEADYGPTILNA 532
              +   M+    KPD  T  S++  C  +    K K++H  S+     E D    +L+A
Sbjct: 403 AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIH-LSISESRLETD--ELLLSA 462

Query: 533 LLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPNDALTIFSGM 583
           LLD YSKCG    A +IF +S  K+++V+   MIS Y +   P +AL  F  M
Sbjct: 463 LLDMYSKCGNEKEAFRIF-NSIPKKDVVSWTVMISAYGSHGQPREALYQFDEM 502

[Close]

BLAST of CsaV3_4G002590 vs. TrEMBL
Match: tr|A0A0A0KVY7|A0A0A0KVY7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G010980 PE=4 SV=1)

HSP 1 Score: 1011.9 bits (2615), Expect = 7.2e-292
Identity = 528/529 (99.81%), Postives = 528/529 (99.81%), Query Frame = 0


Query: 94  KALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRS 153
           KALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRS
Sbjct: 63  KALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRS 122

Query: 154 QIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL 213
           QIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL
Sbjct: 123 QIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL 182

Query: 214 VGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEE 273
           VGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEE
Sbjct: 183 VGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEE 242

Query: 274 PIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQ 333
           PIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQ
Sbjct: 243 PIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQ 302

Query: 334 MEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPA 393
           MEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPA
Sbjct: 303 MEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPA 362

Query: 394 CAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLIS 453
           CAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLIS
Sbjct: 363 CAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLIS 422

Query: 454 WNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSV 513
           WNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSV
Sbjct: 423 WNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSV 482

Query: 514 RACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPN 573
           RACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPN
Sbjct: 483 RACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPN 542

Query: 574 DALTIFSGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQIKGMKPDA 623
           DALTIFSGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LQIKGMKPDA
Sbjct: 543 DALTIFSGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQIKGMKPDA 591

[Close]

BLAST of CsaV3_4G002590 vs. TrEMBL
Match: tr|A0A1S4E005|A0A1S4E005_CUCME (putative pentatricopeptide repeat-containing protein At5g08490 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494608 PE=4 SV=1)

HSP 1 Score: 960.7 bits (2482), Expect = 1.9e-276
Identity = 502/529 (94.90%), Postives = 514/529 (97.16%), Query Frame = 0


Query: 94  KALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRS 153
           KALQGYAVKQGEIACQSVYKGLLNLYA+ GAFDECWKLFEQL+HRDVVTWNIILSGYCRS
Sbjct: 63  KALQGYAVKQGEIACQSVYKGLLNLYAKYGAFDECWKLFEQLDHRDVVTWNIILSGYCRS 122

Query: 154 QIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL 213
           QIHDTKAIRLFVKMHAEGEVK SAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL
Sbjct: 123 QIHDTKAIRLFVKMHAEGEVKASAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL 182

Query: 214 VGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEE 273
           VGNALISMYAKSGQP YDAYAAFNSIIHKDVVTWNTIISALAEKNLM DALQLFSLMLEE
Sbjct: 183 VGNALISMYAKSGQPQYDAYAAFNSIIHKDVVTWNTIISALAEKNLMSDALQLFSLMLEE 242

Query: 274 PIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQ 333
           PIEPNY+TIACILPVCASFGNNVSCRFGKEIHGYI RRTELIEDISVCNALMNLYLRVG+
Sbjct: 243 PIEPNYVTIACILPVCASFGNNVSCRFGKEIHGYIQRRTELIEDISVCNALMNLYLRVGK 302

Query: 334 MEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSDPDSVTLISVLPA 393
           MEEAEILFSHLKQ+DLVSWNT+ISGYSLNDKWL+AVDHFCKLLCLG DPDSVTLISVLP+
Sbjct: 303 MEEAEILFSHLKQKDLVSWNTIISGYSLNDKWLDAVDHFCKLLCLGIDPDSVTLISVLPS 362

Query: 394 CAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLIS 453
           CAYSQN+ +GKMIHGYILRHP+LSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLIS
Sbjct: 363 CAYSQNMLMGKMIHGYILRHPILSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLIS 422

Query: 454 WNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYSV 513
           WNSVLNAFAEFGNTTQF  LLHLMLRERFKPDHFTI SIINFCITVLGGCKVKEVHCYSV
Sbjct: 423 WNSVLNAFAEFGNTTQFLHLLHLMLRERFKPDHFTIFSIINFCITVLGGCKVKEVHCYSV 482

Query: 514 RACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPN 573
           RACLFE DYGPTILNALLDAYSKCG IDYALKIFESSSGKRNLVTCNSMISCYVNCKSPN
Sbjct: 483 RACLFEGDYGPTILNALLDAYSKCGFIDYALKIFESSSGKRNLVTCNSMISCYVNCKSPN 542

Query: 574 DALTIFSGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQIKGMKPDA 623
           DALTIFSG XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  QI+GMKPDA
Sbjct: 543 DALTIFSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIEGMKPDA 591

[Close]

BLAST of CsaV3_4G002590 vs. TrEMBL
Match: tr|A0A2N9IBP4|A0A2N9IBP4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49436 PE=4 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 1.2e-153
Identity = 274/467 (58.67%), Postives = 347/467 (74.30%), Query Frame = 0


Query: 94  KALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRS 153
           KAL G+ VKQG ++C SV K +LN+YA+CG  D+C KLF Q+ + D VTWNI+LSG+  S
Sbjct: 63  KALHGHVVKQGHLSCHSVSKAMLNMYAKCGELDDCQKLFGQMGNSDPVTWNIVLSGFSGS 122

Query: 154 QIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL 213
           +I D + +RLF  MH  GE KP+ ITIA+ LPVC+R+     GKS+HS+V+K+G + +TL
Sbjct: 123 RICDAEVMRLFYTMHVGGEAKPNPITIATTLPVCARLLNIDAGKSVHSYVIKTGWETNTL 182

Query: 214 VGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEE 273
           VGN L+S YAK G    DAYA F SI HKDVV+WN II+  AE   + +A +LF  MLE 
Sbjct: 183 VGNTLVSFYAKCGLVCDDAYALFTSINHKDVVSWNAIIAGFAENKFIVEAFKLFRWMLEG 242

Query: 274 PIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQ 333
           PIEPNY TIA ILPVCAS   NVS  FG++IH Y+ RRTEL+ D+SV NAL++ YLRVG 
Sbjct: 243 PIEPNYATIANILPVCASLDKNVSYCFGRQIHCYVQRRTELLTDVSVRNALVSFYLRVGW 302

Query: 334 MEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLG-SDPDSVTLISVLP 393
           MEEAE LF  +  RDLV+WN +I+GY+ + +WL+A+D F +LL L  + PDSVT +S+LP
Sbjct: 303 MEEAESLFQSMISRDLVTWNAIIAGYASHGEWLKALDLFHELLSLEVTGPDSVTFVSILP 362

Query: 394 ACAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLI 453
           ACA+ QNL++GK IHG+ILRHP L ED+TVGNALVSFY KCN V++AF +F +IS +DLI
Sbjct: 363 ACAHLQNLQVGKEIHGHILRHPYLCEDTTVGNALVSFYAKCNRVEAAFQTFCMISGRDLI 422

Query: 454 SWNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYS 513
           SWNS+L+AF   G  T+F  LL+ ML E  +PD  TILSII+FC TVL   KVKE H YS
Sbjct: 423 SWNSMLDAFVGSGYETRFLGLLNWMLSEGIRPDSITILSIIHFCATVLRVDKVKETHSYS 482

Query: 514 VRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTC 560
           ++A L + D  PT+ NALLDAY+KC  I+YA KIF+S S KRNLVTC
Sbjct: 483 IKASLLQGDVEPTVGNALLDAYAKCSNIEYAFKIFQSLSEKRNLVTC 529

[Close]

BLAST of CsaV3_4G002590 vs. TrEMBL
Match: tr|A0A2K3NSP5|A0A2K3NSP5_TRIPR (Pentatricopeptide repeat-containing protein at5g08490-like protein OS=Trifolium pratense OX=57577 GN=L195_g002518 PE=4 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.7e-153
Identity = 277/531 (52.17%), Postives = 365/531 (68.74%), Query Frame = 0


Query: 94  KALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRS 153
           K L    VKQG  +C    K LLNLYA+CG  D+C K+F+QL H D V WNI+LSG+  S
Sbjct: 63  KCLHSSVVKQGHDSCHVTNKALLNLYAKCGMLDDCQKMFDQLGHCDPVIWNIVLSGFSGS 122

Query: 154 QIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL 213
             HD   +R+F +MH+ GE  PS+++ A +LPVC+R+G    GKS+H + +KSG + DT 
Sbjct: 123 GKHDADVMRVFRRMHSSGEAMPSSVSAAIVLPVCARMGNLYAGKSVHGYAIKSGFEVDTF 182

Query: 214 VGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEE 273
            GNAL+SMYAK G   +DAYA F+SIIHKDVV+WN +I+ LAE  L+ +A  LFSLM++ 
Sbjct: 183 AGNALVSMYAKCGFVSHDAYAVFDSIIHKDVVSWNAMIAGLAENGLLEEAFSLFSLMVKG 242

Query: 274 PIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQ 333
           PI+PNY T+A ILPVCA F  NV+ R G++IH Y+ +  EL+ D+SVCNALM+ YL+VG+
Sbjct: 243 PIQPNYATVANILPVCALFDENVAYRCGRQIHSYVLQWPELLTDVSVCNALMSFYLKVGR 302

Query: 334 MEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGS-DPDSVTLISVLP 393
            +EAE LF  +  RDLVSWN +I+GY+ N +WL+A+  F  L+ L     DSVT++S+LP
Sbjct: 303 TKEAESLFWAMNARDLVSWNAIIAGYTSNGEWLKALQVFGNLVSLEMLLLDSVTMVSILP 362

Query: 394 ACAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLI 453
           ACA  +NL++GK +H YI RHP L E+++VGNALVSFY KC  ++ A+++FS+I  KDLI
Sbjct: 363 ACAQLENLKVGKEMHAYIFRHPFLFEETSVGNALVSFYAKCGYIEEAYNTFSMICRKDLI 422

Query: 454 SWNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYS 513
           SWNS+L+AF E  + ++F  LLHLML+   KPD  TILSII+FC ++L   KVKE+H YS
Sbjct: 423 SWNSILDAFGEKRHHSRFLSLLHLMLKLEIKPDSVTILSIIHFCSSLLRVEKVKEIHSYS 482

Query: 514 VR-ACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKS 573
           +R   L  A   PT+ NA+LDAYSKCG I+YA KIF++ S KRNLVTCNS+IS YV   S
Sbjct: 483 IRNGSLLSATAPPTVGNAILDAYSKCGNIEYANKIFQNLSEKRNLVTCNSLISGYVGLGS 542

Query: 574 PNDALTIFSGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQIKGMKPDA 623
            +DA  IFSGM                             +LQ +GMKPDA
Sbjct: 543 HHDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALGLFSKLQARGMKPDA 593

[Close]

BLAST of CsaV3_4G002590 vs. TrEMBL
Match: tr|A0A067F5K9|A0A067F5K9_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g002834mg PE=4 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 3.5e-153
Identity = 274/530 (51.70%), Postives = 364/530 (68.68%), Query Frame = 0


Query: 94  KALQGYAVKQGEIACQSVYKGLLNLYARCGAFDECWKLFEQLNHRDVVTWNIILSGYCRS 153
           KAL GY  K G I+CQ+V K LLNLYA+CG  D+C+KLF Q+++ D VTWNI+LSG+  S
Sbjct: 63  KALHGYVTKLGHISCQAVSKALLNLYAKCGVIDDCYKLFGQVDNTDPVTWNILLSGFACS 122

Query: 154 QIHDTKAIRLFVKMHAEGEVKPSAITIASILPVCSRVGKGVVGKSIHSFVMKSGLDRDTL 213
            + D + + LF  MH   + KP+++T+A +L  C+R+G    GKS+H++V+K GL+R TL
Sbjct: 123 HVDDARVMNLFYNMHVRDQPKPNSVTVAIVLSACARLGGIFAGKSLHAYVIKFGLERHTL 182

Query: 214 VGNALISMYAKSGQPWYDAYAAFNSIIHKDVVTWNTIISALAEKNLMFDALQLFSLMLEE 273
           VGN+L SMYAK G   +DAY+ F+SI  KDVV+WN +IS L+E  ++ DA +LFS ML E
Sbjct: 183 VGNSLTSMYAKRGLV-HDAYSVFDSIEDKDVVSWNAVISGLSENKVLGDAFRLFSWMLTE 242

Query: 274 PIEPNYITIACILPVCASFGNNVSCRFGKEIHGYIHRRTELIEDISVCNALMNLYLRVGQ 333
           PI+PNY TI  ILP+CAS   +V   FG+EIH Y+ RR ELI D+SVCNAL++ YLR G+
Sbjct: 243 PIKPNYATILNILPICASLDEDVGYFFGREIHCYVLRRAELIADVSVCNALVSFYLRFGR 302

Query: 334 MEEAEILFSHLKQRDLVSWNTLISGYSLNDKWLEAVDHFCKLLCLGSD-PDSVTLISVLP 393
            EEAE+LF  +K RDLVSWN +I+GY+ ND+WL+A++ FC+L+      PDSVTL+S+LP
Sbjct: 303 TEEAELLFRRMKSRDLVSWNAIIAGYASNDEWLKALNLFCELITKEMIWPDSVTLVSLLP 362

Query: 394 ACAYSQNLRIGKMIHGYILRHPVLSEDSTVGNALVSFYTKCNDVKSAFHSFSLISSKDLI 453
           ACAY +NL++GK IHGY LRHP L ED+ VGNALVSFY KC+D+++A+ +F +I  +DLI
Sbjct: 363 ACAYLKNLKVGKEIHGYFLRHPYLEEDAAVGNALVSFYAKCSDMEAAYRTFLMICRRDLI 422

Query: 454 SWNSVLNAFAEFGNTTQFPRLLHLMLRERFKPDHFTILSIINFCITVLGGCKVKEVHCYS 513
           SWNS+L+AF+E G  +QF  LL+ ML E  +PD  TIL+II+FC TVL    VKE H Y 
Sbjct: 423 SWNSMLDAFSESGYNSQFLNLLNCMLMEGIRPDSITILTIIHFCTTVLREGMVKETHGYL 482

Query: 514 VRACLFEADYGPTILNALLDAYSKCGIIDYALKIFESSSGKRNLVTCNSMISCYVNCKSP 573
           ++  L   D    I NA+LDAY+KC  I YA  +F+S   KRNLVT N +IS Y NC S 
Sbjct: 483 IKTGLLLGDTEHNIGNAILDAYAKCRNIKYAFNVFQSLLEKRNLVTFNPVISGYANCGSA 542

Query: 574 NDALTIFSGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLQIKGMKPDA 623
           ++A   FS +                             +LQ +GMKPDA
Sbjct: 543 DEAFMTFSRIYARDLTPWNLMIRVYAENDFPNQALSLFLKLQAQGMKPDA 591

The following BLAST results are available for this feature:

BLAST of CsaV3_4G002590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152312.1	1.1e-291	99.81	PREDICTED: putative pentatricopeptide repeat-containing protein At5g08490 [Cucum...	[more]
XP_008454091.1	2.9e-276	94.90	PREDICTED: putative pentatricopeptide repeat-containing protein At5g08490 isofor...	[more]
XP_022979279.1	2.9e-244	84.12	putative pentatricopeptide repeat-containing protein At5g08490 [Cucurbita maxima...	[more]
XP_022145856.1	1.2e-242	83.33	putative pentatricopeptide repeat-containing protein At5g08490 [Momordica charan...	[more]
XP_022955750.1	3.0e-233	83.86	putative pentatricopeptide repeat-containing protein At5g08490 [Cucurbita moscha...	[more]

BLAST of CsaV3_4G002590 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08490.1	6.2e-140	50.51	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G15510.1	2.9e-60	30.75	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G69350.1	5.9e-58	29.57	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21300.1	7.8e-58	28.81	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G27110.1	1.0e-57	31.08	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CsaV3_4G002590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FNN9\|PP370_ARATH	1.1e-138	50.51	Putative pentatricopeptide repeat-containing protein At5g08490 OS=Arabidopsis th...	[more]
sp\|Q9M9E2\|PPR45_ARATH	5.1e-59	30.75	Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidop...	[more]
sp\|Q9C507\|PP111_ARATH	1.1e-56	29.57	Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS...	[more]
sp\|Q9STE1\|PP333_ARATH	1.4e-56	28.81	Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX...	[more]
sp\|O04659\|PP398_ARATH	1.8e-56	31.08	Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana OX...	[more]

BLAST of CsaV3_4G002590 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KVY7\|A0A0A0KVY7_CUCSA	7.2e-292	99.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G010980 PE=4 SV=1	[more]
tr\|A0A1S4E005\|A0A1S4E005_CUCME	1.9e-276	94.90	putative pentatricopeptide repeat-containing protein At5g08490 isoform X1 OS=Cuc...	[more]
tr\|A0A2N9IBP4\|A0A2N9IBP4_FAGSY	1.2e-153	58.67	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS49436 PE=4 SV=1	[more]
tr\|A0A2K3NSP5\|A0A2K3NSP5_TRIPR	2.7e-153	52.17	Pentatricopeptide repeat-containing protein at5g08490-like protein OS=Trifolium ...	[more]
tr\|A0A067F5K9\|A0A067F5K9_CITSI	3.5e-153	51.70	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g002834mg PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009987	cellular process
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0001101	response to acid chemical
biological_process	GO:1901700	response to oxygen-containing compound
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G002590.1	CsaV3_4G002590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 520..633 e-value: 1.0E-22 score: 82.4 coord: 199..305 e-value: 9.7E-17 score: 62.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 101..198 e-value: 5.6E-15 score: 57.7 coord: 306..414 e-value: 5.4E-15 score: 57.7 coord: 415..519 e-value: 1.3E-9 score: 40.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 242..287 e-value: 1.7E-8 score: 34.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 557..586 e-value: 1.5E-5 score: 22.9 coord: 452..485 e-value: 4.8E-4 score: 18.1 coord: 141..173 e-value: 1.3E-4 score: 19.9 coord: 245..278 e-value: 3.3E-6 score: 24.9 coord: 589..622 e-value: 3.3E-6 score: 24.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 350..379 e-value: 1.1E-4 score: 22.1 coord: 527..548 e-value: 0.2 score: 11.9 coord: 320..348 e-value: 0.0021 score: 18.1 coord: 111..135 e-value: 0.049 score: 13.8 coord: 557..583 e-value: 0.0014 score: 18.6 coord: 141..153 e-value: 0.61 score: 10.4 coord: 589..617 e-value: 4.6E-5 score: 23.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 108..138 score: 7.552
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 211..242 score: 6.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 419..449 score: 5.601
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 139..174 score: 10.523
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 450..484 score: 9.416
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 317..351 score: 9.854
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 243..277 score: 11.192
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 523..553 score: 6.917
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 586..620 score: 11.301
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 352..382 score: 6.116
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 555..585 score: 8.638
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 386..550 coord: 130..396
None	No IPR available	PANTHER	PTHR24015:SF75	SUBFAMILY NOT NAMED	coord: 130..396
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 91..291 coord: 236..496
None	No IPR available	PANTHER	PTHR24015:SF75	SUBFAMILY NOT NAMED	coord: 386..550
None	No IPR available	PANTHER	PTHR24015:SF75	SUBFAMILY NOT NAMED	coord: 91..291 coord: 236..496

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G002590	CSPI04G02660	Wild cucumber (PI 183967)	cpicucB213
CsaV3_4G002590	Cucsa.095480	Cucumber (Gy14) v1	cgycucB102
CsaV3_4G002590	CmaCh14G014230	Cucurbita maxima (Rimu)	cmacucB0298
CsaV3_4G002590	CmoCh14G014580	Cucurbita moschata (Rifu)	cmocucB0291
CsaV3_4G002590	MELO3C017784	Melon (DHL92) v3.5.1	cucmeB315
CsaV3_4G002590	MELO3C017784.2	Melon (DHL92) v3.6.1	cucmedB307

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G002590	Silver-seed gourd	carcucB0137
CsaV3_4G002590	Silver-seed gourd	carcucB0733
CsaV3_4G002590	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G002590	Cucurbita maxima (Rimu)	cmacucB0987
CsaV3_4G002590	Cucurbita moschata (Rifu)	cmocucB0971
CsaV3_4G002590	Cucurbita pepo (Zucchini)	cpecucB0767
CsaV3_4G002590	Cucurbita pepo (Zucchini)	cpecucB1065
CsaV3_4G002590	Bottle gourd (USVL1VR-Ls)	cuclsiB331
CsaV3_4G002590	Melon (DHL92) v3.5.1	cucmeB322
CsaV3_4G002590	Melon (DHL92) v3.6.1	cucmedB315
CsaV3_4G002590	Wax gourd	cucwgoB384