CsaV3_4G000790 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_4G000790
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	mitochondrial zinc maintenance protein 1, mitochondrial
Location	chr4 : 449557 .. 451621 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCATTCATCTTGTTCCAAATCTTATGAATTTGGTAAGAATCCATGATTGCAAATCAACTTTCAGGAGAATTTAACATTTGACAGTGCTTTCGTGATGTAAATTTGAGTCAAGAAGAGTAAAAAAATTGGAAGAATCAAGAGTTTTGGTATTTTATTGAAACGACGTCGTGACCTTCTGGGGAGCTTCATTGTTCGTGAGGAAGCGCTGAAGCCCATTTCAAGAGGGATCTCATCATGAAAGGGGAAGTTCTAAGCGCCTACAGATCGTTGCTCAGGGCAACCAAAAGATCCTTTGCCGGCGACACCTTGATGCTGACCGAGTCGGCCTCCGAGATACGCCGGAAGTTTCAAGAGAGCCGCCACGTGACCTCCGAGCCTGAGATTCGCAAACTGCTCGAAGAAGCTCGGGAGGCATCCCATTTCATCTCCAATATGATCGTTCAGGCCAAGCTTACTTCTCGCGGCGGCTATGGTATTCTACTTCGTTCTTTTACATTTTCGGATTCATTTTCGGTTTCTTTAACAACTAATCAAACAATTGACCAATTGAATATTGAATTTGAAATGAACGCGTGGCAGTCTACATGTTTGATAAAATGCTTCACCCAAAATTTTCCGCTTTTTATTTACTGAAAGCTAGTGGGTTCGTAGAAAAACGCTGATGCTGATACTATTATGTACTCTTCTGGAGTTACTTGGTTTTTAATTTTACTGGGCCGGTGTTTATGAAGACTTAGATTAGGAATCGAGTTGTTTCAAAAAGAAAGAAAAAAGATAAGGAATTGAGAATGTGTGAACCGTGTTCGTATCGTAGAACAGATTATAGAAACACGAGTTTTTGTGATCTAGATTTTTGTTTACTTAACTTCGATAGCAGTGTTCCTTTTCCTTTCTTGAGTTCAATAAAGAGTGAAGATTCAAACATCACACCTCAGATTTTCAATGCCTTAACCTATAGATACATTCTCAAGTTGGAGTGTTGACAGCAAACTCACAAATTGGGATAAAACAAACCCGTATTTGAAACAGAAGTTTGAGTTCTTAACTTCGAATTATACAAACCCATCCAACAAATCAAATACCCTTCAAGGTTCTAACTTTAGAACTCAAGGACACCGTTATACAACCTATGGAACAGATGATGTTCAACCTTTTAAGGTTCTAATTTAACGTGCCAAACTTCCTAAAAAATTTCCTTCTCAATCCTTGTAAATAAAATCTGAGAGCCAAACATTAATTTTTGTTATCGCTGCAGAAATGAAACCGAGTAAAGATCATGCTGGTGCAACACTAGAAGTTCCTACTGAAGAGCTTCTACGCAAATCTAAATGATGAGGTGAGATGATAGACGCTGACTTCCAATTTGACGATTGTTTTAACTTTCAGCTATTTGCTCTTGCCCTCGGAGGATCTTGGAAAATTTTTCTGTTTCCTTTTGTTGGTTCATTTCATATCCATATTTATTTGTTCTCAGTTAAATGTACTTGGTTGGTATGGTTCTTGCATTGGGATAATGAAAGTCCCAACGTTATACCTTTTATTCCAATTTGATGGATCGAGAAAGTTGGACTCAAAAGTCAAAATTTGGCTTGCAACTCTTTTTAGTGAATGAAATTTTCGAGAATGATTTTATCAAGAAGACTGGCTTTAGCAGTAAGAGAAACAGTCATCCTCATTGAAAATCACTTTGTAGGAAAAGTGGACAATTTTTTCATAAAGTAGTGATCGGCAGGTAACTTTTGTGCTGTGCTATGCCATGCCATGCCAACAAGGGAGACTTCTTAGAAAATTGAAACTCACATTTGATATATTTTCTTTTTAGTATAACAAGTACTAGGATGGATGATTGAACCCTCAACCTTTGGAGAGGAAGGTTATTCCAATTATCATTGTGTTAAATTCACTTTGGCTTTTAAGTCATTCTGAAGTTCACCTCTCATTTTTACATTAATTTTGACATGAATGGTTGATTATAGTATTTAGCAAGTTAGAATAAGAGCAGAATTTTGTTGAATGACCTAATACCAAAAAAATTTTAAAACACAACCATTAATGTGTTTTTA

mRNA sequence

ATGAAAGGGGAAGTTCTAAGCGCCTACAGATCGTTGCTCAGGGCAACCAAAAGATCCTTTGCCGGCGACACCTTGATGCTGACCGAGTCGGCCTCCGAGATACGCCGGAAGTTTCAAGAGAGCCGCCACGTGACCTCCGAGCCTGAGATTCGCAAACTGCTCGAAGAAGCTCGGGAGGCATCCCATTTCATCTCCAATATGATCGTTCAGGCCAAGCTTACTTCTCGCGGCGGCTATGAAATGAAACCGAGTAAAGATCATGCTGGTGCAACACTAGAAGTTCCTACTGAAGAGCTTCTACGCAAATCTAAATGA

Coding sequence (CDS)

ATGAAAGGGGAAGTTCTAAGCGCCTACAGATCGTTGCTCAGGGCAACCAAAAGATCCTTTGCCGGCGACACCTTGATGCTGACCGAGTCGGCCTCCGAGATACGCCGGAAGTTTCAAGAGAGCCGCCACGTGACCTCCGAGCCTGAGATTCGCAAACTGCTCGAAGAAGCTCGGGAGGCATCCCATTTCATCTCCAATATGATCGTTCAGGCCAAGCTTACTTCTCGCGGCGGCTATGAAATGAAACCGAGTAAAGATCATGCTGGTGCAACACTAGAAGTTCCTACTGAAGAGCTTCTACGCAAATCTAAATGA

Protein sequence

MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREASHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK

Homology

[Close]

BLAST of CsaV3_4G000790 vs. NCBI nr
Match: XP_004152250.1 (PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis sativus] >KGN52811.1 hypothetical protein Csa_4G001780 [Cucumis sativus])

HSP 1 Score: 197.6 bits (501), Expect = 2.1e-47
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA
Sbjct: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 105
           SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 104

[Close]

BLAST of CsaV3_4G000790 vs. NCBI nr
Match: XP_008454342.1 (PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 5.8e-45
Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           MKGEVLSAYRSLLRATK+SFAGDTLMLTESASEIRRKFQESRHVTSE EIRKLLEEAREA
Sbjct: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 105
           SHFISNMIVQAK TSRGGYEMKPSKDHAGATLEVP+EELLRKSK
Sbjct: 61  SHFISNMIVQAKRTSRGGYEMKPSKDHAGATLEVPSEELLRKSK 104

[Close]

BLAST of CsaV3_4G000790 vs. NCBI nr
Match: XP_022949021.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita moschata] >XP_023524456.1 mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.3 bits (464), Expect = 4.1e-43
Identity = 93/104 (89.42%), Postives = 103/104 (99.04%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           +KGEVLSAYR+LLRATK+SFAGDTLML ESA+E+RRKF+ESRHVTS+PEIRKLLEEAREA
Sbjct: 2   VKGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREA 61

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 105
           SHFISNMIVQAKLTSRGGYEMKPSK+HAGATLEVP+EELLR+SK
Sbjct: 62  SHFISNMIVQAKLTSRGGYEMKPSKEHAGATLEVPSEELLRRSK 105

[Close]

BLAST of CsaV3_4G000790 vs. NCBI nr
Match: XP_022998533.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita maxima])

HSP 1 Score: 180.3 bits (456), Expect = 3.5e-42
Identity = 92/104 (88.46%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           +KGEVLSAYR+LLRATK+SFAGDTLML ESA+E+RRKF+ESRHVTS+PEIRKLLEEAREA
Sbjct: 2   VKGEVLSAYRALLRATKKSFAGDTLMLKESAAEVRRKFEESRHVTSDPEIRKLLEEAREA 61

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 105
           SHFISNMIVQAKLTSRGGYEMK SK+HAGATLEVP+EELLR+SK
Sbjct: 62  SHFISNMIVQAKLTSRGGYEMKASKEHAGATLEVPSEELLRRSK 105

[Close]

BLAST of CsaV3_4G000790 vs. NCBI nr
Match: XP_021280295.1 (mitochondrial zinc maintenance protein 1, mitochondrial [Herrania umbratica])

HSP 1 Score: 163.3 bits (412), Expect = 4.4e-37
Identity = 79/103 (76.70%), Postives = 97/103 (94.17%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           ++GEVLSAYR+LLRAT++SFAGDTLML  SA+E+R+KF E+RHVTSEPEI++LL+EAREA
Sbjct: 2   VRGEVLSAYRALLRATRKSFAGDTLMLNASAAEVRKKFSENRHVTSEPEIQRLLDEAREA 61

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKS 104
           SHFIS MIVQAKL  RGGYE+KPSK+HAGATLE+P+EE++RKS
Sbjct: 62  SHFISTMIVQAKLNDRGGYEVKPSKEHAGATLEIPSEEIIRKS 104

[Close]

BLAST of CsaV3_4G000790 vs. TAIR10
Match: AT3G62810.1 (complex 1 family protein / LVR family protein)

HSP 1 Score: 137.9 bits (346), Expect = 3.6e-33
Identity = 72/100 (72.00%), Postives = 85/100 (85.00%), Query Frame = 0


Query: 3   GEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREASH 62
           GE L AYR+LLRATK+SFAGDT ML  SASEIR+KF+E+R V S  +I +LLEEAREA+ 
Sbjct: 4   GEALIAYRALLRATKKSFAGDTEMLKASASEIRKKFEENRLVASNSDITRLLEEAREATQ 63

Query: 63  FISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRK 103
           FIS MIVQAKL  RGGYEMK S++HAGATLE+P+EE+LRK
Sbjct: 64  FISTMIVQAKLNERGGYEMKASQEHAGATLELPSEEMLRK 103

[Close]

BLAST of CsaV3_4G000790 vs. Swiss-Prot
Match: sp|Q5A7N3|MZM1_CANAL (Mitochondrial zinc maintenance protein 1, mitochondrial OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MZM1 PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 5.8e-04
Identity = 24/75 (32.00%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 5  VLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREASHFI 64
          VLSAYR+ LRATK +F  D  +L  +  ++++  +++ ++ ++PEI + +++  E + F+
Sbjct: 4  VLSAYRNALRATKVAFRQDLPILQAARVQLKQGIRDNSNLQAQPEIEEAVQKLNEVAKFL 63

Query: 65 SNMIVQAKLTSRGGY 80
             IVQ +    G Y
Sbjct: 64 IQNIVQGEKQQDGKY 78

[Close]

BLAST of CsaV3_4G000790 vs. Swiss-Prot
Match: sp|C4Y4R9|MZM1_CLAL4 (Mitochondrial zinc maintenance protein 1, mitochondrial OS=Clavispora lusitaniae (strain ATCC 42720) OX=306902 GN=MZM1 PE=3 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 9.8e-04
Identity = 24/72 (33.33%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 1  MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
          M    L AYR+ LRAT+ +F GD  +L  + ++IR     +R +  + E+ K + E  E 
Sbjct: 1  MSNPALQAYRTALRATRVAFNGDNFVLKSARAKIREGLLSNRDLADKMEVEKKVAELNEV 60

Query: 61 SHFISNMIVQAK 73
          + F+   IVQ +
Sbjct: 61 AQFLVKNIVQGE 72

[Close]

BLAST of CsaV3_4G000790 vs. TrEMBL
Match: tr|A0A0A0KY80|A0A0A0KY80_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001780 PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.4e-47
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA
Sbjct: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 105
           SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK
Sbjct: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 104

[Close]

BLAST of CsaV3_4G000790 vs. TrEMBL
Match: tr|A0A1S3BYH1|A0A1S3BYH1_CUCME (mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494771 PE=3 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.8e-45
Identity = 100/104 (96.15%), Postives = 102/104 (98.08%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           MKGEVLSAYRSLLRATK+SFAGDTLMLTESASEIRRKFQESRHVTSE EIRKLLEEAREA
Sbjct: 1   MKGEVLSAYRSLLRATKKSFAGDTLMLTESASEIRRKFQESRHVTSEAEIRKLLEEAREA 60

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKSK 105
           SHFISNMIVQAK TSRGGYEMKPSKDHAGATLEVP+EELLRKSK
Sbjct: 61  SHFISNMIVQAKRTSRGGYEMKPSKDHAGATLEVPSEELLRKSK 104

[Close]

BLAST of CsaV3_4G000790 vs. TrEMBL
Match: tr|A0A0D2QWG8|A0A0D2QWG8_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G089900 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.5e-36
Identity = 79/103 (76.70%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           ++GE LSAYR+LLRAT++SFAGDTLML  SA E+R+KF+ +RHVTSEPEI+KLLEEAREA
Sbjct: 2   VRGEALSAYRALLRATRKSFAGDTLMLNASAVEVRQKFEANRHVTSEPEIQKLLEEAREA 61

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKS 104
           SHFIS MIVQAKL  RGGYE+KPSK+HAGATLE+P+EE++RKS
Sbjct: 62  SHFISTMIVQAKLNERGGYEVKPSKEHAGATLEIPSEEIIRKS 104

[Close]

BLAST of CsaV3_4G000790 vs. TrEMBL
Match: tr|A0A061DYI4|A0A061DYI4_THECC (Complex 1 family protein / LVR family protein OS=Theobroma cacao OX=3641 GN=TCM_046986 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.5e-36
Identity = 78/103 (75.73%), Postives = 96/103 (93.20%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           ++GEVLSAYR+LLRAT++SFAGDTLML  SA+E+R+KF E+RHVTSEPEI++LL+EAREA
Sbjct: 2   VRGEVLSAYRALLRATRKSFAGDTLMLNASAAEVRKKFNENRHVTSEPEIQRLLDEAREA 61

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKS 104
           SHFIS MIVQAKL  RGGYE+K SK+HAGATLE+P+EE++RKS
Sbjct: 62  SHFISTMIVQAKLNDRGGYEVKTSKEHAGATLEIPSEEIIRKS 104

[Close]

BLAST of CsaV3_4G000790 vs. TrEMBL
Match: tr|A0A1U8K5N2|A0A1U8K5N2_GOSHI (mitochondrial zinc maintenance protein 1, mitochondrial-like OS=Gossypium hirsutum OX=3635 GN=LOC107913641 PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.2e-36
Identity = 78/103 (75.73%), Postives = 94/103 (91.26%), Query Frame = 0


Query: 1   MKGEVLSAYRSLLRATKRSFAGDTLMLTESASEIRRKFQESRHVTSEPEIRKLLEEAREA 60
           ++GE LSAYR+LLRAT++SFAGDTLML  SA E+R+KF+ +RHVTSEPEI+K LEEAREA
Sbjct: 2   VRGEALSAYRALLRATRKSFAGDTLMLNASAVEVRQKFEANRHVTSEPEIQKFLEEAREA 61

Query: 61  SHFISNMIVQAKLTSRGGYEMKPSKDHAGATLEVPTEELLRKS 104
           SHFIS MIVQAKL  RGGYE+KPSK+HAGATLE+P+EE++RKS
Sbjct: 62  SHFISTMIVQAKLNERGGYEVKPSKEHAGATLEIPSEEIIRKS 104

The following BLAST results are available for this feature:

BLAST of CsaV3_4G000790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152250.1	2.1e-47	100.00	PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis sati...	[more]
XP_008454342.1	5.8e-45	96.15	PREDICTED: mitochondrial zinc maintenance protein 1, mitochondrial [Cucumis melo...	[more]
XP_022949021.1	4.1e-43	89.42	mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita moschata] >XP...	[more]
XP_022998533.1	3.5e-42	88.46	mitochondrial zinc maintenance protein 1, mitochondrial [Cucurbita maxima]	[more]
XP_021280295.1	4.4e-37	76.70	mitochondrial zinc maintenance protein 1, mitochondrial [Herrania umbratica]	[more]

BLAST of CsaV3_4G000790 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G62810.1	3.6e-33	72.00	complex 1 family protein / LVR family protein	[more]

BLAST of CsaV3_4G000790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5A7N3\|MZM1_CANAL	5.8e-04	32.00	Mitochondrial zinc maintenance protein 1, mitochondrial OS=Candida albicans (str...	[more]
sp\|C4Y4R9\|MZM1_CLAL4	9.8e-04	33.33	Mitochondrial zinc maintenance protein 1, mitochondrial OS=Clavispora lusitaniae...	[more]

BLAST of CsaV3_4G000790 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KY80\|A0A0A0KY80_CUCSA	1.4e-47	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G001780 PE=3 SV=1	[more]
tr\|A0A1S3BYH1\|A0A1S3BYH1_CUCME	3.8e-45	96.15	mitochondrial zinc maintenance protein 1, mitochondrial OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A0D2QWG8\|A0A0D2QWG8_GOSRA	1.5e-36	76.70	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G089900 PE=3 ...	[more]
tr\|A0A061DYI4\|A0A061DYI4_THECC	2.5e-36	75.73	Complex 1 family protein / LVR family protein OS=Theobroma cacao OX=3641 GN=TCM_...	[more]
tr\|A0A1U8K5N2\|A0A1U8K5N2_GOSHI	4.2e-36	75.73	mitochondrial zinc maintenance protein 1, mitochondrial-like OS=Gossypium hirsut...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008011	Complex1_LYR

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_4G000790.1	CsaV3_4G000790.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008011	Complex 1 LYR protein	PFAM	PF05347	Complex1_LYR	coord: 4..60 e-value: 8.0E-13 score: 48.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..104
None	No IPR available	PANTHER	PTHR13166	PROTEIN C6ORF149	coord: 2..82
None	No IPR available	PANTHER	PTHR13166:SF2	COMPLEX III ASSEMBLY FACTOR LYRM7	coord: 2..82

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_4G000790	CSPI04G00830	Wild cucumber (PI 183967)	cpicucB213
CsaV3_4G000790	Cucsa.097110	Cucumber (Gy14) v1	cgycucB102
CsaV3_4G000790	CmoCh01G003250	Cucurbita moschata (Rifu)	cmocucB0554
CsaV3_4G000790	Cp4.1LG02g16450	Cucurbita pepo (Zucchini)	cpecucB0703
CsaV3_4G000790	CsGy4G000720	Cucumber (Gy14) v2	cgybcucB171
CsaV3_4G000790	Carg07403	Silver-seed gourd	carcucB0803
CsaV3_4G000790	Cla017411	Watermelon (97103) v1	cucwmB300
CsaV3_4G000790	MELO3C017957	Melon (DHL92) v3.5.1	cucmeB315
CsaV3_4G000790	ClCG10G010910	Watermelon (Charleston Gray)	cucwcgB279
CsaV3_4G000790	Lsi03G010730	Bottle gourd (USVL1VR-Ls)	cuclsiB296
CsaV3_4G000790	MELO3C017957.2	Melon (DHL92) v3.6.1	cucmedB307
CsaV3_4G000790	Cla97C10G193820	Watermelon (97103) v2	cucwmbB273
CsaV3_4G000790	Bhi11G001006	Wax gourd	cucwgoB360

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_4G000790	Silver-seed gourd	carcucB0125
CsaV3_4G000790	Silver-seed gourd	carcucB0857
CsaV3_4G000790	Cucumber (Gy14) v2	cgybcucB336
CsaV3_4G000790	Cucumber (Gy14) v1	cgycucB329
CsaV3_4G000790	Cucurbita maxima (Rimu)	cmacucB0299
CsaV3_4G000790	Cucurbita maxima (Rimu)	cmacucB0437
CsaV3_4G000790	Cucurbita maxima (Rimu)	cmacucB0567
CsaV3_4G000790	Cucurbita maxima (Rimu)	cmacucB1062
CsaV3_4G000790	Cucurbita moschata (Rifu)	cmocucB0292
CsaV3_4G000790	Cucurbita moschata (Rifu)	cmocucB0431
CsaV3_4G000790	Cucurbita moschata (Rifu)	cmocucB1044
CsaV3_4G000790	Cucurbita pepo (Zucchini)	cpecucB0162
CsaV3_4G000790	Cucurbita pepo (Zucchini)	cpecucB0393
CsaV3_4G000790	Cucurbita pepo (Zucchini)	cpecucB0768
CsaV3_4G000790	Wild cucumber (PI 183967)	cpicucB402
CsaV3_4G000790	Bottle gourd (USVL1VR-Ls)	cuclsiB265
CsaV3_4G000790	Bottle gourd (USVL1VR-Ls)	cuclsiB287
CsaV3_4G000790	Melon (DHL92) v3.5.1	cucmeB272
CsaV3_4G000790	Melon (DHL92) v3.6.1	cucmedB266
CsaV3_4G000790	Watermelon (Charleston Gray)	cucwcgB334
CsaV3_4G000790	Watermelon (97103) v1	cucwmB376
CsaV3_4G000790	Cucumber (Chinese Long) v3	cuccucB185