CsaV3_3G050040 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G050040
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionremorin
Locationchr3 : 40808585 .. 40811139 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAGTATATAAAAGTAAAAATGTGATTATTTGAGAGTAAAATAGAAGATATGGGAAGGTAGAATAGAAAGAGTCCAATTGTTATATAATATGAAATAGGAAGAAGTTTGTTTGGATGTAGAGCGAAAGAAATAAAAATATGATATGTTAGTTGGAAAAAAATAAATGTATATACAGAAATAGTGGTAGGAGTGAATCATGAATTTTCTTATTATATGTTTGATTTATGGTGAATGATGATGTTATATGGTATATTTATGTTTGAATGAGTTGATTTGATTTGTATGGAAGGAAAAAGAAAGAAAAAAGAGGGTTTGTATATGGGTTGTTTGGAGTATTAGCATAGGAAGTGCCAACTCACATTAAGTCATATGTAACCATCATCCAGCTCACTTTTCAAATAACCACACAATTAATTAACCCTTTTTATTATTATTATTATTATTATTATTACTCTAAATCTAATATCTAATATCTAATATCTAATATCTAAACCACTCACTTTCCCAATCTCTCTCTCTTCCCTTTTTTTTTCTCCATTTTTCACCACTCCCATGGCTGAAGAATCCAAGAAGATCGAATCCCCGCCCCCCTCCGATCCTCCTCAACAACTCCCCAAAGACGTCACCGAGGAGAAATCCGTCATTCCCCCACCGCCCGAACACAAAACTGATGACTCTAAAGCCCTCGTTCTCGTTGAAAGTAACTCAATTCTTCATTACCACAGCCCCCTCCCTCTTTTCTCCTCTTCTCTTCTTCTTTTTTTATTCATTTTTTCAGCTCACACTCTTCTTCCCATCAAATTTATTCAATTTTACTGCGTGCTCTCAATTGGGAAATTTTGAGTTTTTTGTTTGGCTGCTGGAATGGAAATCACCGGACTCATAAATTATCTTTACTTACTTAATCTCTCTTGTTGTTTTCTTGCAGAGGTTCCAGAAGTTGCTGACCCCAAAACCACTGAAGGCTCTGTAAACAGAGGTCTATTTAGGAAAATTAAAAAAACCACCCCTATCTATTTCTTTTTCATTTCTATTATTTCCAAAAATTCTTAAATTTAATTGTATATTTGATTCTTTCCATAGATTAGAATTATAGTTAGAATTTTCTCTTTTAAGAAATTTTTTTAAAAAAATTCTATAAGCATAAGGATCAAACATGAAATTTAATTTATTCCTACATATTTTGACATAGATCTTGTGGAATACTTAAACAATTAAAAGGAATATTTTAGGGTAAAATAGGAAGATGATTTTATAATAAACTTAGCTTTGTAGTCCGTTATTAGTAGTAATTTTCTTTTTATTTCTGGAATCTGAGTGATGCAAATATTGTATTACATATAAAGTTTAGGTTAAATAAAGAGAAAAAGAAAGAAGAGAGTGGTTGGGATTGGGAAACAGAGAGGTGGAATTTATATTAATATAAAAAGAAAATAGGATTTAAAAGTAAAGTTATGTTATTTAGAGTGAAAGGTAAGAGTGAGTTTATATGAATATAATTTGCTGAGATACGCCACACAGATGCTGTGCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCTCTCGTTAAAGCTTGGGAAGAAAGTGAAAAGTCCAAGGCAGAGAACAAGTAAGACCACACAATTTTCCAATTATTTCACTTTTCTTCTATCATCATCTAATTTATGTAATATTTTTCATTTTTAATAATATATGTATATGTTCATTTTCTTAACTCTTATAACACCAACTTATTTTTCCAACACTCCTTATATAGAAGTGAATTGAATCTTGTTTTCCAGAGCCCACAAAAAGCTATCTTCTGTTGCCGCATGGGAGAATAGCCAAAAAGCTTCTGTAGAAGCTGACTTGAAGAAGATCGAGGTATTAAAATATATTTTACATGGTTGAGTAGTTGATTTGTAGTTTGGGAGTGATGTTATTTTGACGACAGACAGCTAGCTAATTAAACAAAACTTTGAGCAGGAAAGTTTGGAGAAAAAGAAGGCAAAGTACATTGAGCAAATGAAGAACAAAATTGCTCTGCTCCACAAATCGGCGGAGGAAAAGAGGGCGATAATCGAAGCCAAGCGAGGAGAAGATCTTCTCAAAGCAGAGGAGACGGCTGCAAAGTACCGTGCCACCGGTACTGCCCCGAAGAAGCTTCTCGGCTGCTTCTCGAGTTGAATGGTCTCGTTTCCAATCCCTGATTATTGTGTGGACGTAGTACTGAAAAACACAATTCTTCATCAGTTGGGGTGTTAATTAGACGTGCTGTGTGTGTGTGTGTGTGTGATGGAAGGAAAAGTATTGTTTATGGTTTGATTTATTGGTATGTGTTTTGTGAATATGATATTTGGAGGAAGATTACTTTGAATGTAAATCAATATTGTTACTTTAATATGTTCTATTGTTTTCACTCTCACATGAAAATTAAAATTTCAAAAGGTCACCATCCCTAATACATACAAGTTTTAGAGGTTGATAGGGCGCTTAGCATTGTTTGCACACCGGCCAGCTTGGGGAACTGGGAATTGGAAGAAATTACATTCATTTACTCCAACCATA

mRNA sequence

ATGGCTGAAGAATCCAAGAAGATCGAATCCCCGCCCCCCTCCGATCCTCCTCAACAACTCCCCAAAGACGTCACCGAGGAGAAATCCGTCATTCCCCCACCGCCCGAACACAAAACTGATGACTCTAAAGCCCTCGTTCTCGTTGAAAAGGTTCCAGAAGTTGCTGACCCCAAAACCACTGAAGGCTCTGTAAACAGAGATGCTGTGCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCTCTCGTTAAAGCTTGGGAAGAAAGTGAAAAGTCCAAGGCAGAGAACAAAGCCCACAAAAAGCTATCTTCTGTTGCCGCATGGGAGAATAGCCAAAAAGCTTCTGTAGAAGCTGACTTGAAGAAGATCGAGGAAAGTTTGGAGAAAAAGAAGGCAAAGTACATTGAGCAAATGAAGAACAAAATTGCTCTGCTCCACAAATCGGCGGAGGAAAAGAGGGCGATAATCGAAGCCAAGCGAGGAGAAGATCTTCTCAAAGCAGAGGAGACGGCTGCAAAGTACCGTGCCACCGGTACTGCCCCGAAGAAGCTTCTCGGCTGCTTCTCGAGTTGA

Coding sequence (CDS)

ATGGCTGAAGAATCCAAGAAGATCGAATCCCCGCCCCCCTCCGATCCTCCTCAACAACTCCCCAAAGACGTCACCGAGGAGAAATCCGTCATTCCCCCACCGCCCGAACACAAAACTGATGACTCTAAAGCCCTCGTTCTCGTTGAAAAGGTTCCAGAAGTTGCTGACCCCAAAACCACTGAAGGCTCTGTAAACAGAGATGCTGTGCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCTCTCGTTAAAGCTTGGGAAGAAAGTGAAAAGTCCAAGGCAGAGAACAAAGCCCACAAAAAGCTATCTTCTGTTGCCGCATGGGAGAATAGCCAAAAAGCTTCTGTAGAAGCTGACTTGAAGAAGATCGAGGAAAGTTTGGAGAAAAAGAAGGCAAAGTACATTGAGCAAATGAAGAACAAAATTGCTCTGCTCCACAAATCGGCGGAGGAAAAGAGGGCGATAATCGAAGCCAAGCGAGGAGAAGATCTTCTCAAAGCAGAGGAGACGGCTGCAAAGTACCGTGCCACCGGTACTGCCCCGAAGAAGCTTCTCGGCTGCTTCTCGAGTTGA

Protein sequence

MAEESKKIESPPPSDPPQQLPKDVTEEKSVIPPPPEHKTDDSKALVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAENKAHKKLSSVAAWENSQKASVEADLKKIEESLEKKKAKYIEQMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAAKYRATGTAPKKLLGCFSS
Homology
[Close]
BLAST of CsaV3_3G050040 vs. NCBI nr
Match: XP_011652698.1 (PREDICTED: remorin-like [Cucumis sativus] >KGN60481.1 hypothetical protein Csa_3G915100 [Cucumis sativus])

HSP 1 Score: 144.4 bits (363), Expect = 3.9e-31
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 44  ALVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXX 103
           ALVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXX
Sbjct: 44  ALVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXX 103

Query: 104 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDL 163
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDL
Sbjct: 104 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDL 163

Query: 164 LKAEETAAKYRATGTAPKKLLGCFSS 190
           LKAEETAAKYRATGTAPKKLLGCFSS
Sbjct: 164 LKAEETAAKYRATGTAPKKLLGCFSS 189

[Close]
BLAST of CsaV3_3G050040 vs. NCBI nr
Match: XP_008465865.1 (PREDICTED: remorin [Cucumis melo])

HSP 1 Score: 139.0 bits (349), Expect = 1.6e-29
Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 0 

Query: 45  LVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXXX 104
           LVLVEKVPEVADPK+TEGSVNRDAVLAKVATEKRLSL+KAWEESEKSKAE XXXXXXXXX
Sbjct: 49  LVLVEKVPEVADPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENXXXXXXXXX 108

Query: 105 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDLL 164
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IIEAKRGEDLL
Sbjct: 109 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIEAKRGEDLL 168

Query: 165 KAEETAAKYRATGTAPKKLLGCFSS 190
           KAEETAAKYRATGTAPKKLLGCFSS
Sbjct: 169 KAEETAAKYRATGTAPKKLLGCFSS 193

[Close]
BLAST of CsaV3_3G050040 vs. NCBI nr
Match: XP_022952053.1 (remorin-like [Cucurbita moschata])

HSP 1 Score: 128.3 bits (321), Expect = 2.9e-26
Identity = 105/146 (71.92%), Postives = 111/146 (76.03%), Query Frame = 0 

Query: 44  ALVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXX 103
           ALVLVEKVPE  + K++EGSVNRDAVLAKVATEKR+SL+KAWEESEKSKAE XXXXXXXX
Sbjct: 54  ALVLVEKVPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENXXXXXXXX 113

Query: 104 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDL 163
           XXXXXXXXXXXXXXXXXXX                              AIIEAKRGE+L
Sbjct: 114 XXXXXXXXXXXXXXXXXXXEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEEL 173

Query: 164 LKAEETAAKYRATGTAPKKLLGCFSS 190
           LKAEETAAKYRATGTAPKKLL CFSS
Sbjct: 174 LKAEETAAKYRATGTAPKKLLSCFSS 199

[Close]
BLAST of CsaV3_3G050040 vs. NCBI nr
Match: XP_022971850.1 (remorin-like [Cucurbita maxima])

HSP 1 Score: 126.7 bits (317), Expect = 8.3e-26
Identity = 103/146 (70.55%), Postives = 109/146 (74.66%), Query Frame = 0 

Query: 44  ALVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXX 103
           ALVLVEK PE  + K++EGSVNRDAVLAKVATEKR+SL+KAWEESEKSKAE  XXXXXXX
Sbjct: 51  ALVLVEKAPEAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKXXXXXXX 110

Query: 104 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDL 163
           XXXXXXXXXXXXXXXXXXX                              AIIEAKRGE+L
Sbjct: 111 XXXXXXXXXXXXXXXXXXXEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEEL 170

Query: 164 LKAEETAAKYRATGTAPKKLLGCFSS 190
           LKAEETAAKYRATGTAPKKLL CFSS
Sbjct: 171 LKAEETAAKYRATGTAPKKLLSCFSS 196

[Close]
BLAST of CsaV3_3G050040 vs. NCBI nr
Match: XP_022957725.1 (remorin-like [Cucurbita moschata])

HSP 1 Score: 124.0 bits (310), Expect = 5.4e-25
Identity = 134/144 (93.06%), Postives = 138/144 (95.83%), Query Frame = 0 

Query: 44  ALVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXX 103
           ALVLVEKV E  +PK+TEGSVNRDAVLAKVATEKRLSL+KAWEESEKSKAEXXXXXXXXX
Sbjct: 53  ALVLVEKVSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAEXXXXXXXXX 112

Query: 104 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDL 163
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +IEA RGEDL
Sbjct: 113 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIEAMRGEDL 172

Query: 164 LKAEETAAKYRATGTAPKKLLGCF 188
           LKAEETAAKYRATGTAPKKL GCF
Sbjct: 173 LKAEETAAKYRATGTAPKKLFGCF 196

[Close]
BLAST of CsaV3_3G050040 vs. TAIR10
Match: AT3G48940.1 (Remorin family protein)

HSP 1 Score: 76.3 bits (186), Expect = 2.3e-14
Identity = 106/126 (84.13%), Postives = 114/126 (90.48%), Query Frame = 0 

Query: 62  GSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXXXXXXXXXXXXXXXXXXXX 121
           GSV+RDAVL ++  +KR+SL+KAWEE+EKSK E XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 50  GSVHRDAVLVRLEQDKRISLIKAWEEAEKSKVENXXXXXXXXXXXXXXXXXXXXXXXXXX 109

Query: 122 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDLLKAEETAAKYRATGTAPK 181
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   EAKRGED+LKAEE AAKYRATGTAP 
Sbjct: 110 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKRGEDVLKAEEMAAKYRATGTAPT 169

Query: 182 KLLGCF 188
           KL G F
Sbjct: 170 KLFGFF 175

[Close]
BLAST of CsaV3_3G050040 vs. TAIR10
Match: AT5G23750.1 (Remorin family protein)

HSP 1 Score: 64.7 bits (156), Expect = 7.0e-11
Identity = 103/140 (73.57%), Postives = 109/140 (77.86%), Query Frame = 0 

Query: 47  LVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXXXXX 106
           +V  VP+       EGSVNRDAVLA+V TEKR+SL+KAWEE+EK K E  XXXXXXXXXX
Sbjct: 62  IVPVVPKEVXXXKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKXXXXXXXXXX 121

Query: 107 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDLLKA 166
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              
Sbjct: 122 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181

Query: 167 EETAAKYRATGTAPKKLLGC 187
            E AAKYRATGTAPKKL GC
Sbjct: 182 XELAAKYRATGTAPKKLFGC 201

[Close]
BLAST of CsaV3_3G050040 vs. TAIR10
Match: AT3G61260.1 (Remorin family protein)

HSP 1 Score: 57.8 bits (138), Expect = 8.6e-09
Identity = 105/145 (72.41%), Postives = 112/145 (77.24%), Query Frame = 0 

Query: 44  ALVLVEK-VPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXX 103
           AL +VEK V E A  K    S++RD  LA ++ EKRLS V+AWEESEKS   XXXXXXXX
Sbjct: 68  ALTVVEKPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSXXXXXXXXXXX 127

Query: 104 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGED 163
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          
Sbjct: 128 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 187

Query: 164 LLKAEETAAKYRATGTAPKKLLGCF 188
           +LKAEETAAKYRATG  PK   GCF
Sbjct: 188 VLKAEETAAKYRATGIVPKATCGCF 212

[Close]
BLAST of CsaV3_3G050040 vs. TAIR10
Match: AT2G45820.1 (Remorin family protein)

HSP 1 Score: 48.9 bits (115), Expect = 4.0e-06
Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 0 

Query: 44 ALVLVEK-VPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSK 93
          AL +VEK + E    K + GS +RD +LA +  EK+ S +KAWEESEKSK
Sbjct: 46 ALAVVEKPIEEHTPKKASSGSADRDVILADLEKEKKTSFIKAWEESEKSK 95

[Close]
BLAST of CsaV3_3G050040 vs. Swiss-Prot
Match: sp|P93788|REMO_SOLTU (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.9e-14
Identity = 110/126 (87.30%), Postives = 116/126 (92.06%), Query Frame = 0 

Query: 62  GSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXXXXXXXXXXXXXXXXXXXX 121
           GS++RDAVLA+VATEKR+SL+KAWEESEKSK  XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 73  GSIDRDAVLARVATEKRVSLIKAWEESEKSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 132

Query: 122 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDLLKAEETAAKYRATGTAPK 181
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      RGEDLLKAEE AAKYRATGTAPK
Sbjct: 133 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEDLLKAEELAAKYRATGTAPK 192

Query: 182 KLLGCF 188
           K+LG F
Sbjct: 193 KILGIF 198

[Close]
BLAST of CsaV3_3G050040 vs. Swiss-Prot
Match: sp|Q9M2D8|Y3126_ARATH (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-07
Identity = 105/145 (72.41%), Postives = 112/145 (77.24%), Query Frame = 0 

Query: 44  ALVLVEK-VPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXX 103
           AL +VEK V E A  K    S++RD  LA ++ EKRLS V+AWEESEKS   XXXXXXXX
Sbjct: 68  ALTVVEKPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSXXXXXXXXXXX 127

Query: 104 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGED 163
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          
Sbjct: 128 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 187

Query: 164 LLKAEETAAKYRATGTAPKKLLGCF 188
           +LKAEETAAKYRATG  PK   GCF
Sbjct: 188 VLKAEETAAKYRATGIVPKATCGCF 212

[Close]
BLAST of CsaV3_3G050040 vs. Swiss-Prot
Match: sp|O80837|REMO_ARATH (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 7.2e-05
Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 0 

Query: 44 ALVLVEK-VPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSK 93
          AL +VEK + E    K + GS +RD +LA +  EK+ S +KAWEESEKSK
Sbjct: 46 ALAVVEKPIEEHTPKKASSGSADRDVILADLEKEKKTSFIKAWEESEKSK 95

[Close]
BLAST of CsaV3_3G050040 vs. TrEMBL
Match: tr|A0A0A0LKG1|A0A0A0LKG1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G915100 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.6e-31
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 44  ALVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXX 103
           ALVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXX
Sbjct: 44  ALVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXX 103

Query: 104 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDL 163
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDL
Sbjct: 104 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDL 163

Query: 164 LKAEETAAKYRATGTAPKKLLGCFSS 190
           LKAEETAAKYRATGTAPKKLLGCFSS
Sbjct: 164 LKAEETAAKYRATGTAPKKLLGCFSS 189

[Close]
BLAST of CsaV3_3G050040 vs. TrEMBL
Match: tr|A0A1S3CPW1|A0A1S3CPW1_CUCME (remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.1e-29
Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 0 

Query: 45  LVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXXX 104
           LVLVEKVPEVADPK+TEGSVNRDAVLAKVATEKRLSL+KAWEESEKSKAE XXXXXXXXX
Sbjct: 49  LVLVEKVPEVADPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENXXXXXXXXX 108

Query: 105 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDLL 164
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IIEAKRGEDLL
Sbjct: 109 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIEAKRGEDLL 168

Query: 165 KAEETAAKYRATGTAPKKLLGCFSS 190
           KAEETAAKYRATGTAPKKLLGCFSS
Sbjct: 169 KAEETAAKYRATGTAPKKLLGCFSS 193

[Close]
BLAST of CsaV3_3G050040 vs. TrEMBL
Match: tr|A0A2C9VQY5|A0A2C9VQY5_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G146800 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 5.2e-24
Identity = 97/143 (67.83%), Postives = 103/143 (72.03%), Query Frame = 0 

Query: 45  LVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXXX 104
           LV VEK PE A+ K+TEGSVNRDAVLA+V TEKR+SL+KAWEESEKSKAEXXXXXXXXXX
Sbjct: 54  LVAVEKAPESAEAKSTEGSVNRDAVLARVETEKRISLIKAWEESEKSKAEXXXXXXXXXX 113

Query: 105 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDLL 164
           XXXXXXXXXXXXXX                                  A+IEAKRGEDLL
Sbjct: 114 XXXXXXXXXXXXXXLRHIEEKLEKTKAEYVEKMKNKIALIHKAAEEKRAMIEAKRGEDLL 173

Query: 165 KAEETAAKYRATGTAPKKLLGCF 188
           KAEE AAKYRATGTAPKKLLGCF
Sbjct: 174 KAEEIAAKYRATGTAPKKLLGCF 196

[Close]
BLAST of CsaV3_3G050040 vs. TrEMBL
Match: tr|A0A2I4F9S2|A0A2I4F9S2_9ROSI (remorin-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108996832 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.4e-23
Identity = 95/145 (65.52%), Postives = 105/145 (72.41%), Query Frame = 0 

Query: 44  ALVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXX 103
           +L +VEK PE A+ K+TEGS+NRDAVLA+VATEKRLSL++AWE+SEKSKAE XXXXXXXX
Sbjct: 58  SLAVVEKAPEYAEEKSTEGSINRDAVLARVATEKRLSLIRAWEDSEKSKAENXXXXXXXX 117

Query: 104 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDL 163
           XXXXXXXXXXXXXXXXX                                A+ EAKRGEDL
Sbjct: 118 XXXXXXXXXXXXXXXXXRIEEKLETKKAEYVEKMKNKVALIHKEAEEKRAVTEAKRGEDL 177

Query: 164 LKAEETAAKYRATGTAPKKLLGCFS 189
           LKAEETAAKYRATGT PKKLLG FS
Sbjct: 178 LKAEETAAKYRATGTGPKKLLGWFS 202

[Close]
BLAST of CsaV3_3G050040 vs. TrEMBL
Match: tr|A0A2N9GSE5|A0A2N9GSE5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30474 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 7.4e-23
Identity = 97/145 (66.90%), Postives = 104/145 (71.72%), Query Frame = 0 

Query: 44  ALVLVEKVPEVADPKTTEGSVNRDAVLAKVATEKRLSLVKAWEESEKSKAEXXXXXXXXX 103
           AL +VEK PE    K+TEGSVNRDAVL +V T+KR+SL+KAWEESEKSKAE  XXXXXXX
Sbjct: 55  ALAIVEKAPEYEAEKSTEGSVNRDAVLERVETQKRISLIKAWEESEKSKAENKXXXXXXX 114

Query: 104 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIIEAKRGEDL 163
           XXXXXXXXXXXXXXX                XXXX              A+IEAKRGEDL
Sbjct: 115 XXXXXXXXXXXXXXXLKQIEEQLEKKKAQYVXXXXNKVALIHKAAEEKRALIEAKRGEDL 174

Query: 164 LKAEETAAKYRATGTAPKKLLGCFS 189
           LKAEETAAKYRATGTAPKKLL CFS
Sbjct: 175 LKAEETAAKYRATGTAPKKLLTCFS 199

The following BLAST results are available for this feature:
BLAST of CsaV3_3G050040 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011652698.13.9e-31100.00PREDICTED: remorin-like [Cucumis sativus] >KGN60481.1 hypothetical protein Csa_3... [more]
XP_008465865.11.6e-2997.24PREDICTED: remorin [Cucumis melo][more]
XP_022952053.12.9e-2671.92remorin-like [Cucurbita moschata][more]
XP_022971850.18.3e-2670.55remorin-like [Cucurbita maxima][more]
XP_022957725.15.4e-2593.06remorin-like [Cucurbita moschata][more]
BLAST of CsaV3_3G050040 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G48940.12.3e-1484.13Remorin family protein[more]
AT5G23750.17.0e-1173.57Remorin family protein[more]
AT3G61260.18.6e-0972.41Remorin family protein[more]
AT2G45820.14.0e-0652.00Remorin family protein[more]
BLAST of CsaV3_3G050040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P93788|REMO_SOLTU2.9e-1487.30Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1[more]
sp|Q9M2D8|Y3126_ARATH1.6e-0772.41Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P... [more]
sp|O80837|REMO_ARATH7.2e-0552.00Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1[more]
BLAST of CsaV3_3G050040 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LKG1|A0A0A0LKG1_CUCSA2.6e-31100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G915100 PE=4 SV=1[more]
tr|A0A1S3CPW1|A0A1S3CPW1_CUCME1.1e-2997.24remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=4 SV=1[more]
tr|A0A2C9VQY5|A0A2C9VQY5_MANES5.2e-2467.83Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G146800 PE=4 SV=... [more]
tr|A0A2I4F9S2|A0A2I4F9S2_9ROSI4.4e-2365.52remorin-like isoform X1 OS=Juglans regia OX=51240 GN=LOC108996832 PE=4 SV=1[more]
tr|A0A2N9GSE5|A0A2N9GSE5_FAGSY7.4e-2366.90Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30474 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005518Remorin_N
IPR005516Remorin_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G050040.1CsaV3_3G050040.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 112..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..107
NoneNo IPR availablePANTHERPTHR31775:SF5REMORIN FAMILY PROTEIN-RELATEDcoord: 2..188
NoneNo IPR availablePANTHERPTHR31775FAMILY NOT NAMEDcoord: 2..188
IPR005516Remorin, C-terminalPFAMPF03763Remorin_Ccoord: 77..182
e-value: 7.5E-32
score: 109.4
IPR005518Remorin, N-terminalPFAMPF03766Remorin_Ncoord: 22..73
e-value: 2.6E-22
score: 78.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G050040CSPI03G47580Wild cucumber (PI 183967)cpicucB157
CsaV3_3G050040Cucsa.313960Cucumber (Gy14) v1cgycucB487
CsaV3_3G050040CmaCh19G004180Cucurbita maxima (Rimu)cmacucB0616
CsaV3_3G050040CsGy3G044970Cucumber (Gy14) v2cgybcucB117
CsaV3_3G050040Cla001703Watermelon (97103) v1cucwmB192
CsaV3_3G050040MELO3C003314Melon (DHL92) v3.5.1cucmeB219
CsaV3_3G050040MELO3C003314.2Melon (DHL92) v3.6.1cucmedB212
CsaV3_3G050040Bhi05G000449Wax gourdcucwgoB307
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G050040Silver-seed gourdcarcucB0245
CsaV3_3G050040Cucurbita moschata (Rifu)cmocucB0600
CsaV3_3G050040Cucurbita pepo (Zucchini)cpecucB0299
CsaV3_3G050040Cucurbita pepo (Zucchini)cpecucB0306
CsaV3_3G050040Wild cucumber (PI 183967)cpicucB145
CsaV3_3G050040Bottle gourd (USVL1VR-Ls)cuclsiB240
CsaV3_3G050040Watermelon (Charleston Gray)cucwcgB182
CsaV3_3G050040Watermelon (97103) v1cucwmB202
CsaV3_3G050040Watermelon (97103) v2cucwmbB254