CsaV3_3G049510 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G049510
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 40368501 .. 40368791 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGTGGGGTCTCGAGAGGATATCAATATATGTTGCTCATGGTGTACGTTGTGGCGGATTTGAACCTTGGGGTAATCAACCATGTGGTTTTTCGTGGAGGTGTGGTGTCTCAATGCCTTTACTTGTAGACTCCATTTAAGGATTTGTTGACGAGTTTTGAAAGCATGTGCCAATGGTGGACGATGAAGTAAGGCCTCAATTAGAATTGTTGTAGATAAAGGCTATGGTCTCTCCCCTATGGCTTACTCCCCCTCCTGTGGTTTTGTTTTTATCTCATAAGGACGATTAG

mRNA sequence

ATGTGGTGGGGTCTCGAGAGGATATCAATATATGTTGCTCATGGTGTACGTTGTGGCGGATTTGAACCTTGGGGTAATCAACCATGTGGTTTTTCGTGGAGGTGTGGTGTCTCAATGCCTTTACTTATAAAGGCTATGGTCTCTCCCCTATGGCTTACTCCCCCTCCTGTGGTTTTGTTTTTATCTCATAAGGACGATTAG

Coding sequence (CDS)

ATGTGGTGGGGTCTCGAGAGGATATCAATATATGTTGCTCATGGTGTACGTTGTGGCGGATTTGAACCTTGGGGTAATCAACCATGTGGTTTTTCGTGGAGGTGTGGTGTCTCAATGCCTTTACTTATAAAGGCTATGGTCTCTCCCCTATGGCTTACTCCCCCTCCTGTGGTTTTGTTTTTATCTCATAAGGACGATTAG

Protein sequence

MWWGLERISIYVAHGVRCGGFEPWGNQPCGFSWRCGVSMPLLIKAMVSPLWLTPPPVVLFLSHKDD
Homology
[Close]
BLAST of CsaV3_3G049510 vs. NCBI nr
Match: KGN60426.1 (hypothetical protein Csa_3G905140 [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 7.7e-35
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MWWGLERISIYVAHGVRCGGFEPWGNQPCGFSWRCGVSMPLLIKAMVSPLWLTPPPVVLF 60
          MWWGLERISIYVAHGVRCGGFEPWGNQPCGFSWRCGVSMPLLIKAMVSPLWLTPPPVVLF
Sbjct: 1  MWWGLERISIYVAHGVRCGGFEPWGNQPCGFSWRCGVSMPLLIKAMVSPLWLTPPPVVLF 60

Query: 61 LSHKDD 67
          LSHKDD
Sbjct: 61 LSHKDD 66

[Close]
BLAST of CsaV3_3G049510 vs. TrEMBL
Match: tr|A0A0A0LK98|A0A0A0LK98_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G905140 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 5.1e-35
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MWWGLERISIYVAHGVRCGGFEPWGNQPCGFSWRCGVSMPLLIKAMVSPLWLTPPPVVLF 60
          MWWGLERISIYVAHGVRCGGFEPWGNQPCGFSWRCGVSMPLLIKAMVSPLWLTPPPVVLF
Sbjct: 1  MWWGLERISIYVAHGVRCGGFEPWGNQPCGFSWRCGVSMPLLIKAMVSPLWLTPPPVVLF 60

Query: 61 LSHKDD 67
          LSHKDD
Sbjct: 61 LSHKDD 66

The following BLAST results are available for this feature:
BLAST of CsaV3_3G049510 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN60426.17.7e-35100.00hypothetical protein Csa_3G905140 [Cucumis sativus][more]
BLAST of CsaV3_3G049510 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G049510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G049510 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LK98|A0A0A0LK98_CUCSA5.1e-35100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G905140 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G049510.1CsaV3_3G049510.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G049510Wax gourdcucwgoB246
CsaV3_3G049510Wax gourdcucwgoB285
CsaV3_3G049510Wax gourdcucwgoB312
CsaV3_3G049510Cucumber (Chinese Long) v3cuccucB109
CsaV3_3G049510Cucumber (Chinese Long) v3cuccucB111
CsaV3_3G049510Silver-seed gourdcarcucB0600
CsaV3_3G049510Silver-seed gourdcarcucB0746
CsaV3_3G049510Silver-seed gourdcarcucB0820
CsaV3_3G049510Cucumber (Gy14) v2cgybcucB117
CsaV3_3G049510Cucumber (Gy14) v2cgybcucB118
CsaV3_3G049510Cucumber (Gy14) v2cgybcucB120
CsaV3_3G049510Cucumber (Gy14) v1cgycucB388
CsaV3_3G049510Cucumber (Gy14) v1cgycucB487
CsaV3_3G049510Cucumber (Gy14) v1cgycucB500
CsaV3_3G049510Cucurbita maxima (Rimu)cmacucB0377
CsaV3_3G049510Cucurbita maxima (Rimu)cmacucB0622
CsaV3_3G049510Cucurbita maxima (Rimu)cmacucB0717
CsaV3_3G049510Cucurbita maxima (Rimu)cmacucB0983
CsaV3_3G049510Cucurbita moschata (Rifu)cmocucB0290
CsaV3_3G049510Cucurbita moschata (Rifu)cmocucB0376
CsaV3_3G049510Cucurbita moschata (Rifu)cmocucB0605
CsaV3_3G049510Cucurbita moschata (Rifu)cmocucB0704
CsaV3_3G049510Cucurbita moschata (Rifu)cmocucB0966
CsaV3_3G049510Cucurbita pepo (Zucchini)cpecucB0251
CsaV3_3G049510Cucurbita pepo (Zucchini)cpecucB0303
CsaV3_3G049510Cucurbita pepo (Zucchini)cpecucB0766
CsaV3_3G049510Cucurbita pepo (Zucchini)cpecucB0894
CsaV3_3G049510Wild cucumber (PI 183967)cpicucB145
CsaV3_3G049510Wild cucumber (PI 183967)cpicucB146
CsaV3_3G049510Wild cucumber (PI 183967)cpicucB150
CsaV3_3G049510Bottle gourd (USVL1VR-Ls)cuclsiB232
CsaV3_3G049510Bottle gourd (USVL1VR-Ls)cuclsiB241
CsaV3_3G049510Bottle gourd (USVL1VR-Ls)cuclsiB251
CsaV3_3G049510Melon (DHL92) v3.5.1cucmeB219
CsaV3_3G049510Melon (DHL92) v3.5.1cucmeB241
CsaV3_3G049510Melon (DHL92) v3.5.1cucmeB251
CsaV3_3G049510Melon (DHL92) v3.6.1cucmedB212
CsaV3_3G049510Melon (DHL92) v3.6.1cucmedB236
CsaV3_3G049510Melon (DHL92) v3.6.1cucmedB242
CsaV3_3G049510Watermelon (Charleston Gray)cucwcgB182
CsaV3_3G049510Watermelon (Charleston Gray)cucwcgB196
CsaV3_3G049510Watermelon (Charleston Gray)cucwcgB236
CsaV3_3G049510Watermelon (97103) v1cucwmB192
CsaV3_3G049510Watermelon (97103) v1cucwmB213
CsaV3_3G049510Watermelon (97103) v1cucwmB247
CsaV3_3G049510Watermelon (97103) v2cucwmbB184
CsaV3_3G049510Watermelon (97103) v2cucwmbB214
CsaV3_3G049510Watermelon (97103) v2cucwmbB254