CsaV3_3G044150 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G044150
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 36009595 .. 36009873 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCAATGCTACGCTGCCATATTTCCAGGTCACTATGGATATATATATAAAAAATCCCGAATGGTGATATCCTTGTTTTTTTTCCTTGTATATGAATTTTATTTGGTGGCATGAGGTATTCTAAGCTTATAACTACCATCTGCAGGAAGAACTGTAGAAATTGTTAGTCTAAAGCAAGTATATGTTCTGATAAATGTCATCCATGAAAACAGTGATGATGAGATGAAAGATGGGGGTAATTCGAATTCCTATCCAGTCAGTTATGAGATCAGATAA

mRNA sequence

ATGTTGCAATGCTACGCTGCCATATTTCCAGGAAGAACTGTAGAAATTGTTAGTCTAAAGCAAGTATATGTTCTGATAAATGTCATCCATGAAAACAGTGATGATGAGATGAAAGATGGGGGTAATTCGAATTCCTATCCAGTCAGTTATGAGATCAGATAA

Coding sequence (CDS)

ATGTTGCAATGCTACGCTGCCATATTTCCAGGAAGAACTGTAGAAATTGTTAGTCTAAAGCAAGTATATGTTCTGATAAATGTCATCCATGAAAACAGTGATGATGAGATGAAAGATGGGGGTAATTCGAATTCCTATCCAGTCAGTTATGAGATCAGATAA

Protein sequence

MLQCYAAIFPGRTVEIVSLKQVYVLINVIHENSDDEMKDGGNSNSYPVSYEIR
BLAST of CsaV3_3G044150 vs. NCBI nr
Match: KGN59851.1 (hypothetical protein Csa_3G850560 [Cucumis sativus])

HSP 1 Score: 110.2 bits (274), Expect = 2.3e-21
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 1  MLQCYAAIFPGRTVEIVSLKQVYVLINVIHENSDDEMKDGGNSNSYPVSYEIR 54
          MLQCYAAIFPGRTVEIVSLKQVYVLINVIHENSDDEMKDGGNSNSYPVSYEIR
Sbjct: 1  MLQCYAAIFPGRTVEIVSLKQVYVLINVIHENSDDEMKDGGNSNSYPVSYEIR 53

BLAST of CsaV3_3G044150 vs. TrEMBL
Match: tr|A0A0A0LII1|A0A0A0LII1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G850560 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.5e-21
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 1  MLQCYAAIFPGRTVEIVSLKQVYVLINVIHENSDDEMKDGGNSNSYPVSYEIR 54
          MLQCYAAIFPGRTVEIVSLKQVYVLINVIHENSDDEMKDGGNSNSYPVSYEIR
Sbjct: 1  MLQCYAAIFPGRTVEIVSLKQVYVLINVIHENSDDEMKDGGNSNSYPVSYEIR 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN59851.12.3e-21100.00hypothetical protein Csa_3G850560 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LII1|A0A0A0LII1_CUCSA1.5e-21100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G850560 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G044150.1CsaV3_3G044150.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G044150CSPI03G41720Wild cucumber (PI 183967)cpicucB145
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G044150Cucumber (Chinese Long) v3cuccucB155
CsaV3_3G044150Silver-seed gourdcarcucB0134
CsaV3_3G044150Cucumber (Gy14) v2cgybcucB117
CsaV3_3G044150Cucumber (Gy14) v2cgybcucB327
CsaV3_3G044150Cucumber (Gy14) v1cgycucB546
CsaV3_3G044150Cucumber (Gy14) v1cgycucB523
CsaV3_3G044150Cucurbita maxima (Rimu)cmacucB0283
CsaV3_3G044150Cucurbita maxima (Rimu)cmacucB0426
CsaV3_3G044150Cucurbita maxima (Rimu)cmacucB0538
CsaV3_3G044150Cucurbita maxima (Rimu)cmacucB1056
CsaV3_3G044150Cucurbita moschata (Rifu)cmocucB0274
CsaV3_3G044150Cucurbita moschata (Rifu)cmocucB0421
CsaV3_3G044150Cucurbita moschata (Rifu)cmocucB0523
CsaV3_3G044150Cucurbita moschata (Rifu)cmocucB1038
CsaV3_3G044150Cucurbita pepo (Zucchini)cpecucB0155
CsaV3_3G044150Cucurbita pepo (Zucchini)cpecucB0380
CsaV3_3G044150Cucurbita pepo (Zucchini)cpecucB0695
CsaV3_3G044150Cucurbita pepo (Zucchini)cpecucB0751
CsaV3_3G044150Wild cucumber (PI 183967)cpicucB394
CsaV3_3G044150Bottle gourd (USVL1VR-Ls)cuclsiB190
CsaV3_3G044150Bottle gourd (USVL1VR-Ls)cuclsiB254
CsaV3_3G044150Melon (DHL92) v3.5.1cucmeB185
CsaV3_3G044150Melon (DHL92) v3.5.1cucmeB223
CsaV3_3G044150Melon (DHL92) v3.6.1cucmedB176
CsaV3_3G044150Melon (DHL92) v3.6.1cucmedB216
CsaV3_3G044150Watermelon (Charleston Gray)cucwcgB190
CsaV3_3G044150Watermelon (Charleston Gray)cucwcgB262
CsaV3_3G044150Watermelon (97103) v1cucwmB201
CsaV3_3G044150Watermelon (97103) v1cucwmB224
CsaV3_3G044150Watermelon (97103) v2cucwmbB242
CsaV3_3G044150Watermelon (97103) v2cucwmbB260
CsaV3_3G044150Wax gourdcucwgoB279
CsaV3_3G044150Wax gourdcucwgoB349