CsaV3_3G043600 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAGAATAATGGAAGTGGAGAATAACGAGCAAGAAATTAGAATTGCTATGTCATGCCTTCAAGAAAATATAAGAAAGTTGTATGTGGCAGCCGAGAAGGGTTGTATTGAAAGCTTGAAGACACTGATAGAAGAAGATCCATGTATCATTCAAAAAGTTGTTATTAGCTCTTCCAACAACAATGAGAATCGTCATCCATTATTGCACCTCTCTATTTCCAATGGCCATCTTGAATTCACTCGACTCCTAATTCATTATGAGCCTCAACTTGCTGCTGAGGTTGACTTGCTTCAACGAACCCCCCTCCACCTTGCTTCTAAACTTGGAGAAACAGAGATTGTTGAAGCTTTATTGTTGGAGAAAAACATGAATTCTTACTTTGTTTACGACAGTGATGGGTTGATTCCTCTTCACTATGCAGTCCTTTCTGGACAAACTGATATAATGCAAAAGCTGATCAAAGCAAGACCAAGATCTCTTTGGATGAAGCTTAAGAACAATGGTCAAACGGTTTTACATTTATGTGTTGAGAGTAACCATTTGGAAGGGATGAAGTTTCTTATTGAAACATATGTAAATGATGATGAAGACTTCCTTAACACAATCGATGATAATGGAAACACTATTTTAGATCTGTCAATGATGCTCGGACAAAGAAAGGTAAAGTAATTTCATAGTGGAAAAAACTTGGGTGCAACCCAAGCAACTTTTGATAGAAACTAAATGTGCCCAATAACATTTTTCTATTTTTAAAATCATTTTTTTAGTTTTTTTTTTATTGATTTTCACAAATACAACAAAGCGATCAAATATTTACGGCCCGTGTAATAAAATAAAAAACCTAATATATTTTTCGTAAATTTCAAGTTTACCCTTGAATATTGCAAATGATTTGTGAACGATCTTTCACTTTTTTTCTTCTTTTTCTTTCCAATTTATTCATCTCTTCTTCGTATCATTAATTTCTTCGTATTATTACTTCTTCTTCTTCATTTTTCACTTGTTATTGTTCGTGATATCTTCATTTTCCCTTCTAGAATTTCTTCATTCTTCAATTTTTTACTTTTTTCTTTTTTCACTTCTTCAATATTATATTTTTGGGAAAAAAACATATTTTTATTTGACAAATTTTATGGGTTGATTTGTAGGATTGCATAAAGATCGGTGAATCTATCTAATATCTAAATAGTTTGAGTAATTATAATGGATAACAATTTTAGAGATAATAATCAGGTGTACTAGCAACATTTTAAAATAGCTAAGCTGATTTAGTAATAGACTTCTATCGATAATTGATAGATCCTTATGGTCTATTGACAGACCAATATGGTTTATGAGTGATAGATTTTATCATATTGATAGACTTGGATAGATTTTGTTATATTTGTAATTATTTAAAATTATATTGCTATTATGTATGAGTACTTTGAATCTAAGCTAATATTGGTTATGTTTCAAAATATTTTTTATTTGTTATTTTCACGGTAGATGGTGGGATATTTACTTTCGGCTCTAGAAGTAAAAACAGAAACAAGCATCATTACAAACTTGGAAGCATCTGATGACACACATGAAAGTTTAGAACTCCAAAAACTATCAAACACAAGAAATCCCAGAGGAAAAAAATCACGAAAACATGGATTGAAAAATACGTCTAAGCTGCGATGGAGGGCATGGAGAATGAATTTGAAGTATAAAGGGGATTGGTTTCAAGAAGTGCAAGGCACAATGATGCTTGTGGCTACGGTCATTGCGACCGTCACTTTTCAAGCCGGACTGAACCCTCCTGGTGGCGTTTGGCAACAAGACACACCATTTAACTCTTCCAGCTACTTCAATAATGATCCATATTATAGACCATTTAATTCTTCCAGCTACTTCAGTTATTATCCATATGATAGTCCGAGAATACCATTAGGTAATATTTTTCCAGCTGGAACTGCAATCATGATGTATTTCAAACCCTACAGATATTCGTATTACATGCAGGTGAACACAATCTCGTTTTTGGCATCCATAAGTGTGATTTTATTGATCGTTGGCCGGTTTCCTTTGAAAAATAAGATCTGTAGCTGGTTGTTGGCATTGGCCATGTGTGTTGCAGTGGTGACCTTAGGAAATGGGTATTTTTCTGGAGTTGCAATGGTTAACTACAGTGGCATGAATGATTCTTTAAGTGCATTCAATTCACTTTATTTTCTAGCTATCTCCTGCCTTGGGTTAGTTAGAGTGACTGGCGTATGGCACATCCTTTCCTTTAAGTTATGGATTGTCAAGACCTTATTCAGCACTTTCATCTCTAAGCTTAAATTCTACTGCTCCAAACGCACCACACCTTGAAGATACTCTCAATCAGGTTCTCTCCCAACAGTACATGATAATTTTTTTCAACACCTAATATTTGTTTGTGTCATTCTTAGGAATTATGATAACATGATCGTACAAAAGTAAGTTGGTGCTACACATAATGATATAGCAACATGTTCCAGATAGAGAATAAAATGCAATTGTAGGAAAAAGTAGTTTATAATTTATATATTCAGTGTAGAAGAGAATTGATTGTCACACTGTTAAAACTAAACTAAAGCAAAAATAGTTCAATTCACATAAATGGTACTGTCAAATTTGTAGTTCAAATCTCCTTACTTTACTGTACTTAGAGAAAACAAAACCCAAAATCTTAATTTTTTTCTCTTCTCCCTTCTATTATTATTTTTTTATCTAGATCTGTAAAATATTTTGGAGTAGACAACTAGAGCCAACAATAATAAAATATCACATAGTATGATGAGACTGATAACAACTTTTCTTTTATAACATTGAATAAAATATTTATTTTGAAAGGAAAATGACAGTAAATTAAAAATTAGAAAAACACACACACACACACAAGAAACCGTGTCAAAAATTAGAAATAATAGAGATTACGATGCTTTCTAATTAAGTTATATGTATTTCATAGAAAAAAGATAACCAAGTTTGAATATTTTTGTATGTTGTGGCTGATGTGGTTGTTCCTTTGTTGGGTTTATATAATTGGGTTCCCTTGTACAGATGGTGAAGGTTCCGGATTGGATGGTGAAGACGTCAGTTCACATGTTGACCTCTCCTTTTCACAACGGTTTAACTAAACCCTTGAGTAGGATATTTACATAATTAGTTAATATATGGTGTCTTATTTCATCTCATAGGTTCATGGTTGTAAATTGGATTATATTTTTGTTACTACAACAAAATATGGAGGGATATTGTCTTAAAAAGGAA ATGGAAGTGGAGAATAACGAGCAAGAAATTAGAATTGCTATGTCATGCCTTCAAGAAAATATAAGAAAGTTGTATGTGGCAGCCGAGAAGGGTTGTATTGAAAGCTTGAAGACACTGATAGAAGAAGATCCATGTATCATTCAAAAAGTTGTTATTAGCTCTTCCAACAACAATGAGAATCGTCATCCATTATTGCACCTCTCTATTTCCAATGGCCATCTTGAATTCACTCGACTCCTAATTCATTATGAGCCTCAACTTGCTGCTGAGGTTGACTTGCTTCAACGAACCCCCCTCCACCTTGCTTCTAAACTTGGAGAAACAGAGATTGTTGAAGCTTTATTGTTGGAGAAAAACATGAATTCTTACTTTGTTTACGACAGTGATGGGTTGATTCCTCTTCACTATGCAGTCCTTTCTGGACAAACTGATATAATGCAAAAGCTGATCAAAGCAAGACCAAGATCTCTTTGGATGAAGCTTAAGAACAATGGTCAAACGGTTTTACATTTATGTGTTGAGAGTAACCATTTGGAAGGGATGAAGTTTCTTATTGAAACATATGTAAATGATGATGAAGACTTCCTTAACACAATCGATGATAATGGAAACACTATTTTAGATCTGTCAATGATGCTCGGACAAAGAAAGATGGTGGGATATTTACTTTCGGCTCTAGAAGTAAAAACAGAAACAAGCATCATTACAAACTTGGAAGCATCTGATGACACACATGAAAGTTTAGAACTCCAAAAACTATCAAACACAAGAAATCCCAGAGGAAAAAAATCACGAAAACATGGATTGAAAAATACGTCTAAGCTGCGATGGAGGGCATGGAGAATGAATTTGAAGTATAAAGGGGATTGGTTTCAAGAAGTGCAAGGCACAATGATGCTTGTGGCTACGGTCATTGCGACCGTCACTTTTCAAGCCGGACTGAACCCTCCTGGTGGCGTTTGGCAACAAGACACACCATTTAACTCTTCCAGCTACTTCAATAATGATCCATATTATAGACCATTTAATTCTTCCAGCTACTTCAGTTATTATCCATATGATAGTCCGAGAATACCATTAGGTAATATTTTTCCAGCTGGAACTGCAATCATGATGTATTTCAAACCCTACAGATATTCGTATTACATGCAGGTGAACACAATCTCGTTTTTGGCATCCATAAGTGTGATTTTATTGATCGTTGGCCGGTTTCCTTTGAAAAATAAGATCTGTAGCTGGTTGTTGGCATTGGCCATGTGTGTTGCAGTGGTGACCTTAGGAAATGGGTATTTTTCTGGAGTTGCAATGGTTAACTACAGTGGCATGAATGATTCTTTAAGTGCATTCAATTCACTTTATTTTCTAGCTATCTCCTGCCTTGGGTTAGTTAGAGTGACTGGCGTATGGCACATCCTTTCCTTTAAGTTATGGATTGTCAAGACCTTATTCAGCACTTTCATCTCTAAGCTTAAATTCTACTGCTCCAAACGCACCACACCTTGA ATGGAAGTGGAGAATAACGAGCAAGAAATTAGAATTGCTATGTCATGCCTTCAAGAAAATATAAGAAAGTTGTATGTGGCAGCCGAGAAGGGTTGTATTGAAAGCTTGAAGACACTGATAGAAGAAGATCCATGTATCATTCAAAAAGTTGTTATTAGCTCTTCCAACAACAATGAGAATCGTCATCCATTATTGCACCTCTCTATTTCCAATGGCCATCTTGAATTCACTCGACTCCTAATTCATTATGAGCCTCAACTTGCTGCTGAGGTTGACTTGCTTCAACGAACCCCCCTCCACCTTGCTTCTAAACTTGGAGAAACAGAGATTGTTGAAGCTTTATTGTTGGAGAAAAACATGAATTCTTACTTTGTTTACGACAGTGATGGGTTGATTCCTCTTCACTATGCAGTCCTTTCTGGACAAACTGATATAATGCAAAAGCTGATCAAAGCAAGACCAAGATCTCTTTGGATGAAGCTTAAGAACAATGGTCAAACGGTTTTACATTTATGTGTTGAGAGTAACCATTTGGAAGGGATGAAGTTTCTTATTGAAACATATGTAAATGATGATGAAGACTTCCTTAACACAATCGATGATAATGGAAACACTATTTTAGATCTGTCAATGATGCTCGGACAAAGAAAGATGGTGGGATATTTACTTTCGGCTCTAGAAGTAAAAACAGAAACAAGCATCATTACAAACTTGGAAGCATCTGATGACACACATGAAAGTTTAGAACTCCAAAAACTATCAAACACAAGAAATCCCAGAGGAAAAAAATCACGAAAACATGGATTGAAAAATACGTCTAAGCTGCGATGGAGGGCATGGAGAATGAATTTGAAGTATAAAGGGGATTGGTTTCAAGAAGTGCAAGGCACAATGATGCTTGTGGCTACGGTCATTGCGACCGTCACTTTTCAAGCCGGACTGAACCCTCCTGGTGGCGTTTGGCAACAAGACACACCATTTAACTCTTCCAGCTACTTCAATAATGATCCATATTATAGACCATTTAATTCTTCCAGCTACTTCAGTTATTATCCATATGATAGTCCGAGAATACCATTAGGTAATATTTTTCCAGCTGGAACTGCAATCATGATGTATTTCAAACCCTACAGATATTCGTATTACATGCAGGTGAACACAATCTCGTTTTTGGCATCCATAAGTGTGATTTTATTGATCGTTGGCCGGTTTCCTTTGAAAAATAAGATCTGTAGCTGGTTGTTGGCATTGGCCATGTGTGTTGCAGTGGTGACCTTAGGAAATGGGTATTTTTCTGGAGTTGCAATGGTTAACTACAGTGGCATGAATGATTCTTTAAGTGCATTCAATTCACTTTATTTTCTAGCTATCTCCTGCCTTGGGTTAGTTAGAGTGACTGGCGTATGGCACATCCTTTCCTTTAAGTTATGGATTGTCAAGACCTTATTCAGCACTTTCATCTCTAAGCTTAAATTCTACTGCTCCAAACGCACCACACCTTGA MEVENNEQEIRIAMSCLQENIRKLYVAAEKGCIESLKTLIEEDPCIIQKVVISSSNNNENRHPLLHLSISNGHLEFTRLLIHYEPQLAAEVDLLQRTPLHLASKLGETEIVEALLLEKNMNSYFVYDSDGLIPLHYAVLSGQTDIMQKLIKARPRSLWMKLKNNGQTVLHLCVESNHLEGMKFLIETYVNDDEDFLNTIDDNGNTILDLSMMLGQRKMVGYLLSALEVKTETSIITNLEASDDTHESLELQKLSNTRNPRGKKSRKHGLKNTSKLRWRAWRMNLKYKGDWFQEVQGTMMLVATVIATVTFQAGLNPPGGVWQQDTPFNSSSYFNNDPYYRPFNSSSYFSYYPYDSPRIPLGNIFPAGTAIMMYFKPYRYSYYMQVNTISFLASISVILLIVGRFPLKNKICSWLLALAMCVAVVTLGNGYFSGVAMVNYSGMNDSLSAFNSLYFLAISCLGLVRVTGVWHILSFKLWIVKTLFSTFISKLKFYCSKRTTP
BLAST of CsaV3_3G043600 vs. NCBI nr
Match: XP_004141216.1 (PREDICTED: uncharacterized protein LOC101203970 [Cucumis sativus] >KGN59794.1 hypothetical protein Csa_3G846590 [Cucumis sativus]) HSP 1 Score: 796.2 bits (2055), Expect = 6.4e-227 Identity = 500/500 (100.00%), Postives = 500/500 (100.00%), Query Frame = 0
BLAST of CsaV3_3G043600 vs. NCBI nr
Match: XP_008464012.1 (PREDICTED: uncharacterized protein LOC103501999 isoform X1 [Cucumis melo]) HSP 1 Score: 520.4 bits (1339), Expect = 6.8e-144 Identity = 330/503 (65.61%), Postives = 359/503 (71.37%), Query Frame = 0
BLAST of CsaV3_3G043600 vs. NCBI nr
Match: XP_008447612.1 (PREDICTED: uncharacterized protein LOC103490026 [Cucumis melo]) HSP 1 Score: 330.1 bits (845), Expect = 1.3e-86 Identity = 213/490 (43.47%), Postives = 278/490 (56.73%), Query Frame = 0
BLAST of CsaV3_3G043600 vs. NCBI nr
Match: XP_023526885.1 (ankyrin repeat-containing protein NPR4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 308.9 bits (790), Expect = 3.1e-80 Identity = 258/482 (53.53%), Postives = 316/482 (65.56%), Query Frame = 0
BLAST of CsaV3_3G043600 vs. NCBI nr
Match: XP_011649355.1 (PREDICTED: uncharacterized protein LOC101212496 [Cucumis sativus]) HSP 1 Score: 303.9 bits (777), Expect = 1.0e-78 Identity = 207/476 (43.49%), Postives = 268/476 (56.30%), Query Frame = 0
BLAST of CsaV3_3G043600 vs. TAIR10
Match: AT3G13950.1 (unknown protein) HSP 1 Score: 74.3 bits (181), Expect = 2.3e-13 Identity = 48/156 (30.77%), Postives = 79/156 (50.64%), Query Frame = 0
BLAST of CsaV3_3G043600 vs. TAIR10
Match: AT4G13266.1 (unknown protein) HSP 1 Score: 62.8 bits (151), Expect = 7.1e-10 Identity = 52/205 (25.37%), Postives = 95/205 (46.34%), Query Frame = 0
BLAST of CsaV3_3G043600 vs. TAIR10
Match: AT5G51160.1 (Ankyrin repeat family protein) HSP 1 Score: 48.1 bits (113), Expect = 1.8e-05 Identity = 34/126 (26.98%), Postives = 59/126 (46.83%), Query Frame = 0
BLAST of CsaV3_3G043600 vs. TAIR10
Match: AT4G14390.1 (Ankyrin repeat family protein) HSP 1 Score: 46.2 bits (108), Expect = 6.8e-05 Identity = 27/80 (33.75%), Postives = 42/80 (52.50%), Query Frame = 0
BLAST of CsaV3_3G043600 vs. TAIR10
Match: AT2G24600.3 (Ankyrin repeat family protein) HSP 1 Score: 44.7 bits (104), Expect = 2.0e-04 Identity = 29/88 (32.95%), Postives = 48/88 (54.55%), Query Frame = 0
BLAST of CsaV3_3G043600 vs. TrEMBL
Match: tr|A0A0A0LFQ3|A0A0A0LFQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G846590 PE=4 SV=1) HSP 1 Score: 796.2 bits (2055), Expect = 4.3e-227 Identity = 500/500 (100.00%), Postives = 500/500 (100.00%), Query Frame = 0
BLAST of CsaV3_3G043600 vs. TrEMBL
Match: tr|A0A1S3CM14|A0A1S3CM14_CUCME (uncharacterized protein LOC103501999 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501999 PE=4 SV=1) HSP 1 Score: 520.4 bits (1339), Expect = 4.5e-144 Identity = 330/503 (65.61%), Postives = 359/503 (71.37%), Query Frame = 0
BLAST of CsaV3_3G043600 vs. TrEMBL
Match: tr|A0A1S3BIS1|A0A1S3BIS1_CUCME (uncharacterized protein LOC103490026 OS=Cucumis melo OX=3656 GN=LOC103490026 PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 8.6e-87 Identity = 213/490 (43.47%), Postives = 278/490 (56.73%), Query Frame = 0
BLAST of CsaV3_3G043600 vs. TrEMBL
Match: tr|A0A0A0LMQ1|A0A0A0LMQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287040 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 4.5e-75 Identity = 193/437 (44.16%), Postives = 248/437 (56.75%), Query Frame = 0
BLAST of CsaV3_3G043600 vs. TrEMBL
Match: tr|A0A0A0LCQ0|A0A0A0LCQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G847090 PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 2.3e-63 Identity = 234/493 (47.46%), Postives = 301/493 (61.05%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |