CsaV3_3G043590 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G043590
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	ankyrin repeat-containing protein At3g12360-like
Location	chr3 : 35435162 .. 35437040 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTACAGTCTTCCAATTCTGAAGAGGGCGGTGAAATTAGGATAAGGATCCCACCAGTTGGCGAAGAAAATACACGAAAATTCTATGAAGCTTCAAAGGTTGCCTTGAAGAAAATTATTGAAGAGGACAAAGATATGGTTCAAAGTGTTGTGAACTTTTGTTCCAGTGATATTGAGAATCCATTACATTTCAATTACGATGGTCCTGATGAGCTATCTCCCAAGGTCAATGCCCTCCAACAAACTCCTCTTCACTTAGCTTCTAAAAATGGCGACATGGAGATGGTTCGAGTTTTGCTCGACAAAAATAGGAGTGCTTGCTTGGTTCGTGATTTCAATGGCTTGATTCCTCTCCACCATGCAGTGATTGGAGGACATGTTCAGATGGTGAAGGAATTGATTCGTGCAAGACCAAGATCTATGTGGATAAAGCTAAAAAATGGTCAAACTGTTTTGCATTTATGTGTTGAAGATAATCATTTGGAAGTCATCAAGTTGTTGATTGAAATAGCTTTGTATCACGATGAAGATTTTCTTGACATAACTGATGACGCTGGAAATACCATTTTAGATATGTCTCTAAAGTTGAAAAGATTTGAGGTACGTAATTGAGTCACCTCTAGCCTATATACGATGTGTTTTTTCAGAACAATTGGCAAGTTATGAATTTCGTAGTTACACTCTGATGACGATTGAATTACGCTGTTTGTGGATGATCTACCGATCAATTTAGCTCGATTAAAATAAAATTTAAACTTATATACATATGTTTCTCGTTATTCAACCAAAAACACATAAATAAAATATCAAAAGGAAAAAAAAAATGTATATGTTCCTTGAAAATAGTGGTAAACATAAAATATCTTAATTAATTTACTCAATAAAAAATGAAAATCCTACCAAAATTTAAACAAAATATGTTAATTAAATTGCAAATTTGATTATTGCAGATTAAAAAATAATTAAAATCTAGTTTCTAGGGTTTGATAGATATCTTATCAATAGTTTATACAATTTATGACTATCTATGAAGATATTATGAGACCATAAAGACAATTACAAGCATGTTATCAAATTCTAATTTTTAAAACCTTAATGACTAAATTCTAACTTCGTTCCAAGTTAAAATTTGTGTGCGTAGATGTTGGAATATTTGCTCACAATTCAAAAAATGAAAAGGGGAAAAATGAGCATGAAGGATGCAATGGCAGCTCCAAATGTGATCAAAAGAAGTAAAAACTGGAACATTCAACAAAGTAAAAGAAGGGAAGGGTCGTCCAAGAAGAAGAGAAAAGGGCAATGGCAAATTTGGAAGAAGAATCTAAAATACAAAGGGGATTGGCTCCAAGAAGTGCAAGGCACATTGATGTTGGTGGCGACCGTGATTGCAACCGTGACATTTCAAGGCGCGATCAATCCTCCAGGAGGAACTTGGCAACAAGATCAAGAGTTGACTAGTTGTAGATGGAAACAAGAAGGACCAGTTCATATGGAAATTCAAGATGTAGGAACTGCAATAATGGCATGCAAATCTCTCCAAATCTACACAAGTTACTTCATATCAAATTCAATATCATTCTTTGCATCAGTTAGTGTGATTTTATTGATCGTGAGTGGGTTTCCTTTGAAAAACAAGATTTTTCGTTGGTTGTTGACAGTAGCCATGACTATTGCCGTTGTATTTTTAACATTTGCATATATAAATGGAACGGCAATGGTTTTTAGGAATAAAACTGCCCAAAGCTACTTGTTGGATTTGCTTCATGTTTGGTATGGGTTGGTTGGGTTAGTAATTCTTGGTTGCATTATATTACCCTTTTTCATTTGGCTGCTCAAAAAGTTCCTTCGCATATTGGTCGTCTTTGGATATATAAACTAG

mRNA sequence

ATGGTACAGTCTTCCAATTCTGAAGAGGGCGGTGAAATTAGGATAAGGATCCCACCAGTTGGCGAAGAAAATACACGAAAATTCTATGAAGCTTCAAAGGTTGCCTTGAAGAAAATTATTGAAGAGGACAAAGATATGGTTCAAAGTGTTGTGAACTTTTGTTCCAGTGATATTGAGAATCCATTACATTTCAATTACGATGGTCCTGATGAGCTATCTCCCAAGGTCAATGCCCTCCAACAAACTCCTCTTCACTTAGCTTCTAAAAATGGCGACATGGAGATGGTTCGAGTTTTGCTCGACAAAAATAGGAGTGCTTGCTTGGTTCGTGATTTCAATGGCTTGATTCCTCTCCACCATGCAGTGATTGGAGGACATGTTCAGATGGTGAAGGAATTGATTCGTGCAAGACCAAGATCTATGTGGATAAAGCTAAAAAATGGTCAAACTGTTTTGCATTTATGTGTTGAAGATAATCATTTGGAAGTCATCAAGTTGTTGATTGAAATAGCTTTGTATCACGATGAAGATTTTCTTGACATAACTGATGACGCTGGAAATACCATTTTAGATATGTCTCTAAAGTTGAAAAGATTTGAGATGTTGGAATATTTGCTCACAATTCAAAAAATGAAAAGGGGAAAAATGAGCATGAAGGATGCAATGGCAGCTCCAAATGTGATCAAAAGAAGTAAAAACTGGAACATTCAACAAAGTAAAAGAAGGGAAGGGTCGTCCAAGAAGAAGAGAAAAGGGCAATGGCAAATTTGGAAGAAGAATCTAAAATACAAAGGGGATTGGCTCCAAGAAGTGCAAGGCACATTGATGTTGGTGGCGACCGTGATTGCAACCGTGACATTTCAAGGCGCGATCAATCCTCCAGGAGGAACTTGGCAACAAGATCAAGAGTTGACTAGTTGTAGATGGAAACAAGAAGGACCAGTTCATATGGAAATTCAAGATGTAGGAACTGCAATAATGGCATGCAAATCTCTCCAAATCTACACAAGTTACTTCATATCAAATTCAATATCATTCTTTGCATCAGTTAGTGTGATTTTATTGATCGTGAGTGGGTTTCCTTTGAAAAACAAGATTTTTCGTTGGTTGTTGACAGTAGCCATGACTATTGCCGTTGTATTTTTAACATTTGCATATATAAATGGAACGGCAATGGTTTTTAGGAATAAAACTGCCCAAAGCTACTTGTTGGATTTGCTTCATGTTTGGTATGGGTTGGTTGGGTTAGTAATTCTTGGTTGCATTATATTACCCTTTTTCATTTGGCTGCTCAAAAAGTTCCTTCGCATATTGGTCGTCTTTGGATATATAAACTAG

Coding sequence (CDS)

ATGGTACAGTCTTCCAATTCTGAAGAGGGCGGTGAAATTAGGATAAGGATCCCACCAGTTGGCGAAGAAAATACACGAAAATTCTATGAAGCTTCAAAGGTTGCCTTGAAGAAAATTATTGAAGAGGACAAAGATATGGTTCAAAGTGTTGTGAACTTTTGTTCCAGTGATATTGAGAATCCATTACATTTCAATTACGATGGTCCTGATGAGCTATCTCCCAAGGTCAATGCCCTCCAACAAACTCCTCTTCACTTAGCTTCTAAAAATGGCGACATGGAGATGGTTCGAGTTTTGCTCGACAAAAATAGGAGTGCTTGCTTGGTTCGTGATTTCAATGGCTTGATTCCTCTCCACCATGCAGTGATTGGAGGACATGTTCAGATGGTGAAGGAATTGATTCGTGCAAGACCAAGATCTATGTGGATAAAGCTAAAAAATGGTCAAACTGTTTTGCATTTATGTGTTGAAGATAATCATTTGGAAGTCATCAAGTTGTTGATTGAAATAGCTTTGTATCACGATGAAGATTTTCTTGACATAACTGATGACGCTGGAAATACCATTTTAGATATGTCTCTAAAGTTGAAAAGATTTGAGATGTTGGAATATTTGCTCACAATTCAAAAAATGAAAAGGGGAAAAATGAGCATGAAGGATGCAATGGCAGCTCCAAATGTGATCAAAAGAAGTAAAAACTGGAACATTCAACAAAGTAAAAGAAGGGAAGGGTCGTCCAAGAAGAAGAGAAAAGGGCAATGGCAAATTTGGAAGAAGAATCTAAAATACAAAGGGGATTGGCTCCAAGAAGTGCAAGGCACATTGATGTTGGTGGCGACCGTGATTGCAACCGTGACATTTCAAGGCGCGATCAATCCTCCAGGAGGAACTTGGCAACAAGATCAAGAGTTGACTAGTTGTAGATGGAAACAAGAAGGACCAGTTCATATGGAAATTCAAGATGTAGGAACTGCAATAATGGCATGCAAATCTCTCCAAATCTACACAAGTTACTTCATATCAAATTCAATATCATTCTTTGCATCAGTTAGTGTGATTTTATTGATCGTGAGTGGGTTTCCTTTGAAAAACAAGATTTTTCGTTGGTTGTTGACAGTAGCCATGACTATTGCCGTTGTATTTTTAACATTTGCATATATAAATGGAACGGCAATGGTTTTTAGGAATAAAACTGCCCAAAGCTACTTGTTGGATTTGCTTCATGTTTGGTATGGGTTGGTTGGGTTAGTAATTCTTGGTTGCATTATATTACCCTTTTTCATTTGGCTGCTCAAAAAGTTCCTTCGCATATTGGTCGTCTTTGGATATATAAACTAG

Protein sequence

MVQSSNSEEGGEIRIRIPPVGEENTRKFYEASKVALKKIIEEDKDMVQSVVNFCSSDIENPLHFNYDGPDELSPKVNALQQTPLHLASKNGDMEMVRVLLDKNRSACLVRDFNGLIPLHHAVIGGHVQMVKELIRARPRSMWIKLKNGQTVLHLCVEDNHLEVIKLLIEIALYHDEDFLDITDDAGNTILDMSLKLKRFEMLEYLLTIQKMKRGKMSMKDAMAAPNVIKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACKSLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGTAMVFRNKTAQSYLLDLLHVWYGLVGLVILGCIILPFFIWLLKKFLRILVVFGYIN

Homology

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BLAST of CsaV3_3G043590 vs. NCBI nr
Match: XP_004141215.2 (PREDICTED: ankyrin repeat-containing protein At3g12360 [Cucumis sativus])

HSP 1 Score: 686.0 bits (1769), Expect = 8.4e-194
Identity = 415/415 (100.00%), Postives = 415/415 (100.00%), Query Frame = 0


Query: 1   MVQSSNSEEGGEIRIRIPPVGEENTRKFYEASKVALKKIIEEDKDMVQSVVNFCSSDIEN 60
           MVQSSNSEEGGEIRIRIPPVGEENTRKFYEASKVALKKIIEEDKDMVQSVVNFCSSDIEN
Sbjct: 9   MVQSSNSEEGGEIRIRIPPVGEENTRKFYEASKVALKKIIEEDKDMVQSVVNFCSSDIEN 68

Query: 61  PLHFNYDGPDELSPKVNALQQTPLHLASKNGDMEMVRVLLDKNRSACLVRDFNGLXXXXX 120
           PLHFNYDGPDELSPKVNALQQTPLHLASKNGDMEMVRVLLDKNRSACLVRDFNGLXXXXX
Sbjct: 69  PLHFNYDGPDELSPKVNALQQTPLHLASKNGDMEMVRVLLDKNRSACLVRDFNGLXXXXX 128

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIALYHDEDFLD 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIALYHDEDFLD
Sbjct: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIALYHDEDFLD 188

Query: 181 ITDDAGNTILDMSLKLKRFEMLEYLLTIQKMKRGKMSMKDAMAAPNVIKRSKNWNIQQSK 240
           ITDDAGNTILDMSLKLKRFEMLEYLLTIQKMKRGKMSMKDAMAAPNVIKRSKNWNIQQSK
Sbjct: 189 ITDDAGNTILDMSLKLKRFEMLEYLLTIQKMKRGKMSMKDAMAAPNVIKRSKNWNIQQSK 248

Query: 241 RREGSSKKKRKGQWQIWKKNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQ 300
           RREGSSKKKRKGQWQIWKKNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQ
Sbjct: 249 RREGSSKKKRKGQWQIWKKNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQ 308

Query: 301 DQELTSCRWKQEGPVHMEIQDVGTAIMACKSLQIYTSYFISNSISFFASVSVILLIVSGF 360
           DQELTSCRWKQEGPVHMEIQDVGTAIMACKSLQIYTSYFISNSISFFASVSVILLIVSGF
Sbjct: 309 DQELTSCRWKQEGPVHMEIQDVGTAIMACKSLQIYTSYFISNSISFFASVSVILLIVSGF 368

Query: 361 PLKNKIFRWLLTVAMTIAVVFLTFAYINGTAMVFRNKTAQSYLLDLLHVWYGLVG 416
           PLKNKIFRWLLTVAMTIAVVFLTFAYINGTAMVFRNKTAQSYLLDLLHVWYGLVG
Sbjct: 369 PLKNKIFRWLLTVAMTIAVVFLTFAYINGTAMVFRNKTAQSYLLDLLHVWYGLVG 423

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BLAST of CsaV3_3G043590 vs. NCBI nr
Match: XP_016903122.1 (PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis melo])

HSP 1 Score: 478.0 bits (1229), Expect = 3.5e-131
Identity = 320/383 (83.55%), Postives = 334/383 (87.21%), Query Frame = 0


Query: 1   MVQSSNSEEGGEIRIRIPPVGEENTRKFYEASKV----ALKKIIEEDKDMVQSVVNFCSS 60
           MVQSSNSEEG EIRIRI PV EEN RK  EAS V     L+K+IE+DKDMVQSV+ FCS+
Sbjct: 9   MVQSSNSEEGDEIRIRISPVFEENIRKLCEASMVGSIQTLRKLIEDDKDMVQSVLIFCSN 68

Query: 61  DIENPLHFNYDGPDELSPKVNALQQTPLHLASKNGDMEMVRVLLDKNRSACLVRDFNGLX 120
           DIE PLH NY+ PDEL+P VNALQQTPLHLAS+NGDMEMVRVLL KN S CLVRDFNGLX
Sbjct: 69  DIEYPLHLNYNSPDELAPMVNALQQTPLHLASQNGDMEMVRVLLAKNTSTCLVRDFNGLX 128

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI-ALYHD 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX I  LYHD
Sbjct: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFYLYHD 188

Query: 181 EDFLDITDDAGNTILDMSLKLKRFEMLEYLLTIQKMKRGKMSMKDAMAAPNVIKRSKNWN 240
           EDFLDITDD GNTILDMSL LKRFEMLEYLLTIQKM+RGKMS+KD +A P V KRSK  N
Sbjct: 189 EDFLDITDDNGNTILDMSLGLKRFEMLEYLLTIQKMQRGKMSLKDVLAVPKVNKRSKKRN 248

Query: 241 IQQS-KRREGSSKKKRKGQWQIWKKNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPP 300
           IQ S             GQWQIWKKNLKYKGDW +EVQGTLMLVATVIATVTFQGAINPP
Sbjct: 249 IQISXXXXXXXXXXXXXGQWQIWKKNLKYKGDWQKEVQGTLMLVATVIATVTFQGAINPP 308

Query: 301 GGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACKSLQIYTSYFISNSISFFASVSVIL 360
           GGTWQQDQE TSCRWKQEGP HMEIQDVGTAIMACKS+QIYTSYFISNSISFFAS+SVIL
Sbjct: 309 GGTWQQDQEFTSCRWKQEGPAHMEIQDVGTAIMACKSVQIYTSYFISNSISFFASISVIL 368

Query: 361 LIVSGFPLKNKIFRWLLTVAMTI 378
           LIVSGFPLKNKIFRW LTVAMTI
Sbjct: 369 LIVSGFPLKNKIFRWFLTVAMTI 391

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BLAST of CsaV3_3G043590 vs. NCBI nr
Match: KGN59792.1 (hypothetical protein Csa_3G846570 [Cucumis sativus])

HSP 1 Score: 454.5 bits (1168), Expect = 4.1e-124
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 211 MKRGKMSMKDAMAAPNVIKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQE 270
           MKRGKMSMKDAMAAPNVIKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQE
Sbjct: 1   MKRGKMSMKDAMAAPNVIKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQE 60

Query: 271 VQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACK 330
           VQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACK
Sbjct: 61  VQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACK 120

Query: 331 SLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGT 390
           SLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGT
Sbjct: 121 SLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGT 180

Query: 391 AMVFRNKTAQSYLLDLLHVWYGLVGLVILGCIILPFFIWLLKKFLRILVVFGYIN 446
           AMVFRNKTAQSYLLDLLHVWYGLVGLVILGCIILPFFIWLLKKFLRILVVFGYIN
Sbjct: 181 AMVFRNKTAQSYLLDLLHVWYGLVGLVILGCIILPFFIWLLKKFLRILVVFGYIN 235

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BLAST of CsaV3_3G043590 vs. NCBI nr
Match: KGN59793.1 (hypothetical protein Csa_3G846580 [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 2.9e-69
Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MVQSSNSEEGGEIRIRIPPVGEENTRKFYEASKVALKKIIEEDKDMVQSVVNFCSSDIEN 60
           MVQSSNSEEGGEIRIRIPPVGEENTRKFYEASKVALKKIIEEDKDMVQSVVNFCSSDIEN
Sbjct: 9   MVQSSNSEEGGEIRIRIPPVGEENTRKFYEASKVALKKIIEEDKDMVQSVVNFCSSDIEN 68

Query: 61  PLHFNYDGPDELSPKVNALQQTPLHLASKNGDMEMVRVLLDKNRSACLVRDFNGLXXXXX 120
           PLHFNYDGPDELSPKVNALQQTPLHLASKNGDMEMVRVLLDKNRSACLVRDFNGLXXXXX
Sbjct: 69  PLHFNYDGPDELSPKVNALQQTPLHLASKNGDMEMVRVLLDKNRSACLVRDFNGLXXXXX 128

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIALYHDEDFLD 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIALYHDEDFLD
Sbjct: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIALYHDEDFLD 188

Query: 181 ITDDAGNTILDMSLKLKRFEM 202
           ITDDAGNTILDMSLKLKRFE+
Sbjct: 189 ITDDAGNTILDMSLKLKRFEV 209

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BLAST of CsaV3_3G043590 vs. NCBI nr
Match: XP_023526884.1 (uncharacterized protein LOC111790252 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.5 bits (680), Expect = 1.6e-67
Identity = 146/217 (67.28%), Postives = 175/217 (80.65%), Query Frame = 0


Query: 224 APNVIKRSKNWNIQQS---KRREGSSKKKRKGQWQIWKKNLKYKGDWLQEVQGTLMLVAT 283
           APNV+KR+K W++Q++   KRR+  S +KR G W+IWK +LKYKGDWLQEVQGTLMLVAT
Sbjct: 52  APNVMKRTKEWSVQRTRNMKRRKRVSNQKR-GWWEIWKNSLKYKGDWLQEVQGTLMLVAT 111

Query: 284 VIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACKSLQIYTSYFI 343
           VIATVTFQGAI+PPGG WQQD  LT+C WKQ   VH +   VGTAIMACKSL +Y  YF+
Sbjct: 112 VIATVTFQGAIDPPGGIWQQD-VLTNCSWKQGTEVHAQ---VGTAIMACKSLYVYIRYFM 171

Query: 344 SNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGTAMVFRNKTAQ 403
           +NSISF ASVSVILLIVSGFPLKN++F  LLT+AM +AV  L FAY+ G+AMV  N+T+Q
Sbjct: 172 ANSISFLASVSVILLIVSGFPLKNRVFGGLLTLAMCVAVACLAFAYVCGSAMVNGNQTSQ 231

Query: 404 SYLLDLLHVWYGLVGLVILGCIILPFFIWLLKKFLRI 438
           SYL  LL VWYG+VGLV L C+I+PF IW +K F+RI
Sbjct: 232 SYLWVLLRVWYGIVGLVTLCCVIIPFLIWAVKTFVRI 263

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BLAST of CsaV3_3G043590 vs. TAIR10
Match: AT3G13950.1 (unknown protein)

HSP 1 Score: 87.0 bits (214), Expect = 3.1e-17
Identity = 67/194 (34.54%), Postives = 112/194 (57.73%), Query Frame = 0


Query: 242 REGSSKKKRKGQWQIWKKNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQD 301
           +EG   ++   +W +  K LK +GDWL++ +G LM+ ATVIA ++FQ  +NPPGG WQ D
Sbjct: 6   QEGHRYEESSSEWFV--KYLKRQGDWLEKTRGNLMVTATVIAGMSFQVMVNPPGGVWQSD 65

Query: 302 QELTSCRW-KQEGPVHMEIQDVGTAIMACKSLQ--IYTSYFISNSISFFASVSVILLIVS 361
               +C +  Q G         GTA++  +S +   Y    IS+++SF  S+S+ILL++S
Sbjct: 66  ----NCSFGNQTGTAPFCKGRAGTAVLEYESSKRIAYIGMIISSTVSFSTSMSLILLVIS 125

Query: 362 GFPLKNKIFRWLLTVAMTIAVVFLTFAYINGTAMVFRNKTAQSYLLDLLHVWYGLVGLVI 421
           G  L+N++   +L   M +AV+ ++ A+     +V  +     Y+L L++V + +V  V+
Sbjct: 126 GIRLRNRMIMAILGTFMVVAVLCISAAFFFAIVLVQSDDQIIRYIL-LIYVGFWVVFPVL 185

Query: 422 LGCIILPFFI-WLL 432
           +  I L  FI WL+
Sbjct: 186 ILLIQLVRFIGWLI 192

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BLAST of CsaV3_3G043590 vs. TAIR10
Match: AT4G13266.1 (unknown protein)

HSP 1 Score: 77.0 bits (188), Expect = 3.2e-14
Identity = 59/184 (32.07%), Postives = 97/184 (52.72%), Query Frame = 0


Query: 261 LKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQ 320
           L ++GDWL++ +G L++ ATVIA ++F   +NPPGG WQ +     C  K +        
Sbjct: 25  LDHQGDWLEKTRGNLVVAATVIAAMSFGVMVNPPGGVWQSE----DCSSKGQTTFQTRTC 84

Query: 321 D--VGTAIMACKSLQ--IYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMT 380
           +  +GT+I+     +   Y    ISN +SF AS+ +I L++ GF  +N++   ++ + M 
Sbjct: 85  EGKLGTSILEHNPSKRIFYLGMVISNLVSFSASMGIIFLVIIGFRFRNRLIMTIMVMFMV 144

Query: 381 IAVVFLTFAYINGTAMV-----FRNKTAQSYLLDLLHVWYGLVGLVILGCIILPFFIWLL 436
           +AV+ ++ A+     +V     F  K  Q Y    L  W  L  LVIL  I L  F+W +
Sbjct: 145 VAVLCISAAFFFAAGLVQHEDDFIEKILQIY----LGFWVLLPVLVIL--IQLVRFLWWV 198

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BLAST of CsaV3_3G043590 vs. TAIR10
Match: AT5G51160.1 (Ankyrin repeat family protein)

HSP 1 Score: 53.9 bits (128), Expect = 2.9e-07
Identity = 37/125 (29.60%), Postives = 64/125 (51.20%), Query Frame = 0


Query: 245 SSKKKRKGQWQIWKKNLKY-----KGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQ 304
           S+ ++R  + Q  K+ +KY       D   E +  L++VA+++AT TFQ ++ PPGGTWQ
Sbjct: 239 STCQERTMKSQSHKELVKYFTFKKHRDSPSEARSALLVVASLVATATFQASLTPPGGTWQ 298

Query: 305 QDQ-ELTSCRWKQEGPVHMEIQDVGTAIMACKSLQIYTSYFISNSISFFASVSVILLIVS 364
                  S         + +    G +IM   +   +T +   N+I F  S+S++ ++  
Sbjct: 299 DSSIPAVSQNTTNVNTTNQQAHTAGQSIMGTFNGVAFTLFVFFNTIGFSVSLSMLNILTL 358

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BLAST of CsaV3_3G043590 vs. TAIR10
Match: AT5G54700.1 (Ankyrin repeat family protein)

HSP 1 Score: 53.1 bits (126), Expect = 5.0e-07
Identity = 39/123 (31.71%), Postives = 68/123 (55.28%), Query Frame = 0


Query: 268 LQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIM 327
           LQ  + T+ +VA +IA+VTF   +NPPGG +   QE TS + K                +
Sbjct: 210 LQNARNTITVVAILIASVTFAVGMNPPGGIY---QESTSSKGKS---------------V 269

Query: 328 ACKSLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVA---MTIAVVFLTF 387
           A K++  +  +++SNSI+ F S+ +++L+VS  P K K  + +L +    M+++V  L  
Sbjct: 270 AAKTV-AFKIFYVSNSIALFTSLWIVILLVSIIPFKPKSLKNVLVITHKMMSVSVAALAT 313

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BLAST of CsaV3_3G043590 vs. TAIR10
Match: AT5G50140.1 (Ankyrin repeat family protein)

HSP 1 Score: 50.4 bits (119), Expect = 3.2e-06
Identity = 44/174 (25.29%), Postives = 83/174 (47.70%), Query Frame = 0


Query: 259 KNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHME 318
           K  + + + LQ  + T+ +VA +IA+VTF   +NPPGG +            Q+G    +
Sbjct: 351 KEKEMQSEALQNARNTITVVAVLIASVTFTCGLNPPGGVY------------QDGHFIGK 410

Query: 319 IQDVGTAIMACKSLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVA---M 378
               GT          +  + +SNSI+ F S+ +++L++S  P + K  +  L +    +
Sbjct: 411 ATAGGTV--------AFKVFSVSNSIALFTSLCIVILLLSIIPFRTKSLKTFLIITHKMI 470

Query: 379 TIAVVFLTFAYINGTAMVFRNKTAQSYLLDLLHVWYGLVGLVILGCIILPFFIW 430
            +AV+ +  AY+ GT +   +     ++L    V    +  V+LG + +  F+W
Sbjct: 471 WLAVIAMASAYVAGTCVTLPHSRGNKWVLKATLV----IACVMLGGMFI--FLW 498

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BLAST of CsaV3_3G043590 vs. TrEMBL
Match: tr|A0A1S4E4H6|A0A1S4E4H6_CUCME (ankyrin repeat-containing protein At3g12360-like OS=Cucumis melo OX=3656 GN=LOC103502000 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.3e-131
Identity = 320/383 (83.55%), Postives = 334/383 (87.21%), Query Frame = 0


Query: 1   MVQSSNSEEGGEIRIRIPPVGEENTRKFYEASKV----ALKKIIEEDKDMVQSVVNFCSS 60
           MVQSSNSEEG EIRIRI PV EEN RK  EAS V     L+K+IE+DKDMVQSV+ FCS+
Sbjct: 9   MVQSSNSEEGDEIRIRISPVFEENIRKLCEASMVGSIQTLRKLIEDDKDMVQSVLIFCSN 68

Query: 61  DIENPLHFNYDGPDELSPKVNALQQTPLHLASKNGDMEMVRVLLDKNRSACLVRDFNGLX 120
           DIE PLH NY+ PDEL+P VNALQQTPLHLAS+NGDMEMVRVLL KN S CLVRDFNGLX
Sbjct: 69  DIEYPLHLNYNSPDELAPMVNALQQTPLHLASQNGDMEMVRVLLAKNTSTCLVRDFNGLX 128

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI-ALYHD 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX I  LYHD
Sbjct: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIFYLYHD 188

Query: 181 EDFLDITDDAGNTILDMSLKLKRFEMLEYLLTIQKMKRGKMSMKDAMAAPNVIKRSKNWN 240
           EDFLDITDD GNTILDMSL LKRFEMLEYLLTIQKM+RGKMS+KD +A P V KRSK  N
Sbjct: 189 EDFLDITDDNGNTILDMSLGLKRFEMLEYLLTIQKMQRGKMSLKDVLAVPKVNKRSKKRN 248

Query: 241 IQQS-KRREGSSKKKRKGQWQIWKKNLKYKGDWLQEVQGTLMLVATVIATVTFQGAINPP 300
           IQ S             GQWQIWKKNLKYKGDW +EVQGTLMLVATVIATVTFQGAINPP
Sbjct: 249 IQISXXXXXXXXXXXXXGQWQIWKKNLKYKGDWQKEVQGTLMLVATVIATVTFQGAINPP 308

Query: 301 GGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACKSLQIYTSYFISNSISFFASVSVIL 360
           GGTWQQDQE TSCRWKQEGP HMEIQDVGTAIMACKS+QIYTSYFISNSISFFAS+SVIL
Sbjct: 309 GGTWQQDQEFTSCRWKQEGPAHMEIQDVGTAIMACKSVQIYTSYFISNSISFFASISVIL 368

Query: 361 LIVSGFPLKNKIFRWLLTVAMTI 378
           LIVSGFPLKNKIFRW LTVAMTI
Sbjct: 369 LIVSGFPLKNKIFRWFLTVAMTI 391

[Close]

BLAST of CsaV3_3G043590 vs. TrEMBL
Match: tr|A0A0A0LGA6|A0A0A0LGA6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G846570 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 2.7e-124
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 211 MKRGKMSMKDAMAAPNVIKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQE 270
           MKRGKMSMKDAMAAPNVIKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQE
Sbjct: 1   MKRGKMSMKDAMAAPNVIKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQE 60

Query: 271 VQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACK 330
           VQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACK
Sbjct: 61  VQGTLMLVATVIATVTFQGAINPPGGTWQQDQELTSCRWKQEGPVHMEIQDVGTAIMACK 120

Query: 331 SLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGT 390
           SLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGT
Sbjct: 121 SLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVFLTFAYINGT 180

Query: 391 AMVFRNKTAQSYLLDLLHVWYGLVGLVILGCIILPFFIWLLKKFLRILVVFGYIN 446
           AMVFRNKTAQSYLLDLLHVWYGLVGLVILGCIILPFFIWLLKKFLRILVVFGYIN
Sbjct: 181 AMVFRNKTAQSYLLDLLHVWYGLVGLVILGCIILPFFIWLLKKFLRILVVFGYIN 235

[Close]

BLAST of CsaV3_3G043590 vs. TrEMBL
Match: tr|A0A0A0LDC0|A0A0A0LDC0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G846580 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.9e-69
Identity = 200/201 (99.50%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MVQSSNSEEGGEIRIRIPPVGEENTRKFYEASKVALKKIIEEDKDMVQSVVNFCSSDIEN 60
           MVQSSNSEEGGEIRIRIPPVGEENTRKFYEASKVALKKIIEEDKDMVQSVVNFCSSDIEN
Sbjct: 9   MVQSSNSEEGGEIRIRIPPVGEENTRKFYEASKVALKKIIEEDKDMVQSVVNFCSSDIEN 68

Query: 61  PLHFNYDGPDELSPKVNALQQTPLHLASKNGDMEMVRVLLDKNRSACLVRDFNGLXXXXX 120
           PLHFNYDGPDELSPKVNALQQTPLHLASKNGDMEMVRVLLDKNRSACLVRDFNGLXXXXX
Sbjct: 69  PLHFNYDGPDELSPKVNALQQTPLHLASKNGDMEMVRVLLDKNRSACLVRDFNGLXXXXX 128

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIALYHDEDFLD 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIALYHDEDFLD
Sbjct: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIALYHDEDFLD 188

Query: 181 ITDDAGNTILDMSLKLKRFEM 202
           ITDDAGNTILDMSLKLKRFE+
Sbjct: 189 ITDDAGNTILDMSLKLKRFEV 209

[Close]

BLAST of CsaV3_3G043590 vs. TrEMBL
Match: tr|A0A1S3BIS1|A0A1S3BIS1_CUCME (uncharacterized protein LOC103490026 OS=Cucumis melo OX=3656 GN=LOC103490026 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 2.1e-60
Identity = 175/478 (36.61%), Postives = 251/478 (52.51%), Query Frame = 0


Query: 4   SSNSEEGGEIRIRIPPVGEENTRKFYEASKV----ALKKIIEEDKDMVQSVVNFCSS-DI 63
           +S+  +  ++ I +  + E+  RK YEASK+     LK +I+++ D++   + + SS  I
Sbjct: 13  NSSDAQNSQVIIEMSSMEEDIIRKLYEASKIGCVQTLKTLIQDNPDLIHKALIYTSSITI 72

Query: 64  ENPL--------HFNY-----DGPDELSPKVNALQQTPLHLA-SKNGDMEMVRVLLDKNR 123
           E PL        H  +     D   +L+ +V+A Q+TPLH+A S NGDME++R LL+KN 
Sbjct: 73  ETPLLHVSVFHGHLEFTQLLLDHNPQLAAEVDAFQRTPLHIACSNNGDMEIIRALLEKNT 132

Query: 124 SACLVRDFNGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183
           SACLV+D +GL                                                 
Sbjct: 133 SACLVQDLSGLIPLHYAVISENIEMMELLIKARPQSVLMKLNNNNDKTVLHLCVEGNHLE 192

Query: 184 XXXXXIA--LYHDEDFLDITDDAGNTILDMSLKLKRFEMLEYLLTIQKMKRGKMSMKDAM 243
                IA  L  D+DFL+  DD GNTILD+SL L+R EM+ YLL I + K     +K+ +
Sbjct: 193 GMKLLIAQTLLFDKDFLNAMDDEGNTILDLSLMLRRIEMVGYLLMIPEAKTRTNDIKEKL 252

Query: 244 AAPNVIKRSKNWNIQQSKRREGSSKKKRKGQWQIWKKNLKYKGDWLQEVQGTLMLVATVI 303
                I +++N   Q+ +    S+KK+  G+W++W+K LKY+GDW+QEVQGT+MLVATVI
Sbjct: 253 LESQKITKTRNRKTQRRESVSLSTKKRPIGRWKVWRKKLKYRGDWVQEVQGTMMLVATVI 312

Query: 304 ATVTFQGAINPPGGTWQQDQELT-----------SCRWKQEGPVHME----------IQD 363
           ATVTFQG +NPPGG WQQD                  W ++  ++ E          +  
Sbjct: 313 ATVTFQGGVNPPGGVWQQDTPFIYSSIINTTKNGFSEWYKDFGLYEEYSYLRNNTSVLFP 372

Query: 364 VGTAIMACKSLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAVVF 423
            GT +M  +   + + Y   N++SF AS+SVIL+IVS FPLKN+I  WLLT+ M IAVV 
Sbjct: 373 AGTGVMRFQQPLLCSLYLWVNTVSFLASMSVILMIVSRFPLKNRICSWLLTLDMCIAVVS 432

Query: 424 LTFAYINGTAMV----FRNKT--AQSYLLDLLHV-WYGLVGLVILGCIILPFFIWLLK 433
           L   Y+ G  MV    F  K   + S +  L  + W+G+VGLV L   I    IW++K
Sbjct: 433 LAIGYLLGVKMVNLLTFPEKEDFSNSDVFSLTVICWFGIVGLVCL-WFITSILIWMVK 489

[Close]

BLAST of CsaV3_3G043590 vs. TrEMBL
Match: tr|A0A0A0LMQ1|A0A0A0LMQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287040 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 4.1e-56
Identity = 159/423 (37.59%), Postives = 223/423 (52.72%), Query Frame = 0


Query: 4   SSNSEEGGEIRIRIPPVGEENTRKFYEASKV----ALKKIIEEDKDMVQSVVNFCSS-DI 63
           +S+  +   + + I  + E+  RK YEASK+     LK  I+E+ +++  V+ + SS   
Sbjct: 17  NSSDAQSSHVVVEISSMEEDVIRKLYEASKIGCVQTLKTFIKENPNLIHKVLIYTSSITT 76

Query: 64  ENPL--------HFNY-----DGPDELSPKVNALQQTPLHLA-SKNGDMEMVRVLLDKNR 123
           E PL        H  +     D   +L+ +V+A Q+TPLH+A S NGDME++R LL+KN 
Sbjct: 77  ETPLLHISVSQGHLEFTRLLLDHIPQLATEVDAFQRTPLHIACSNNGDMEIIRALLEKNT 136

Query: 124 SACLVRDFNGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183
           S+CLV+D NG                                                  
Sbjct: 137 SSCLVQDLNGFIPLHYAVISENIEMMKLLIKARPQSILMKALHNNNGKTVLHLCVEGNYL 196

Query: 184 XXXXXI---ALYHDEDFLDITDDAGNTILDMSLKLKRFEMLEYLLTIQKMKRGKMSMKDA 243
                +    L  D+DFL+  DD GNTILD+SL L+R EM+ YLLTI + K      K+ 
Sbjct: 197 EGMKLLIPQTLLFDKDFLNTMDDEGNTILDLSLTLRRIEMVGYLLTIPEAKTRTNDTKEK 256

Query: 244 MAAPNVIKRSKNWNIQQSKRREGSS---KKKRKGQWQIWKKNLKYKGDWLQEVQGTLMLV 303
           +     I +++N   +++KRRE  S   KKK  G W++WKK LKYKGDW+QEVQGT+MLV
Sbjct: 257 ILESQKITKARN---RKTKRRELVSLCTKKKSIGLWKVWKKKLKYKGDWVQEVQGTMMLV 316

Query: 304 ATVIATVTFQGAINPPGGTWQQDQELTSCRWK-------QEGPVHMEIQDV--------- 363
           ATVIATVTFQG +NPPGG WQQD       +         E  ++  + D+         
Sbjct: 317 ATVIATVTFQGGVNPPGGVWQQDTPFVYSSFNDATKNCLNEFYMNFGLYDLFSYSNTTVL 376

Query: 364 ---GTAIMACKSLQIYTSYFISNSISFFASVSVILLIVSGFPLKNKIFRWLLTVAMTIAV 383
              GT +M  +  ++Y+ Y   N++SF AS++VIL+IVS FPLKN+I  WLL  AM IAV
Sbjct: 377 FAAGTGVMKSQQPEVYSIYIWVNTVSFLASMTVILMIVSRFPLKNRICSWLLAFAMCIAV 436

The following BLAST results are available for this feature:

BLAST of CsaV3_3G043590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141215.2	8.4e-194	100.00	PREDICTED: ankyrin repeat-containing protein At3g12360 [Cucumis sativus]	[more]
XP_016903122.1	3.5e-131	83.55	PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis melo]	[more]
KGN59792.1	4.1e-124	100.00	hypothetical protein Csa_3G846570 [Cucumis sativus]	[more]
KGN59793.1	2.9e-69	99.50	hypothetical protein Csa_3G846580 [Cucumis sativus]	[more]
XP_023526884.1	1.6e-67	67.28	uncharacterized protein LOC111790252 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G043590 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G13950.1	3.1e-17	34.54	unknown protein	[more]
AT4G13266.1	3.2e-14	32.07	unknown protein	[more]
AT5G51160.1	2.9e-07	29.60	Ankyrin repeat family protein	[more]
AT5G54700.1	5.0e-07	31.71	Ankyrin repeat family protein	[more]
AT5G50140.1	3.2e-06	25.29	Ankyrin repeat family protein	[more]

BLAST of CsaV3_3G043590 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G043590 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E4H6\|A0A1S4E4H6_CUCME	2.3e-131	83.55	ankyrin repeat-containing protein At3g12360-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0LGA6\|A0A0A0LGA6_CUCSA	2.7e-124	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G846570 PE=4 SV=1	[more]
tr\|A0A0A0LDC0\|A0A0A0LDC0_CUCSA	1.9e-69	99.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G846580 PE=4 SV=1	[more]
tr\|A0A1S3BIS1\|A0A1S3BIS1_CUCME	2.1e-60	36.61	uncharacterized protein LOC103490026 OS=Cucumis melo OX=3656 GN=LOC103490026 PE=...	[more]
tr\|A0A0A0LMQ1\|A0A0A0LMQ1_CUCSA	4.1e-56	37.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G287040 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR026961	PGG_dom
IPR036770	Ankyrin_rpt-contain_sf
IPR020683	Ankyrin_rpt-contain_dom
IPR002110	Ankyrin_rpt

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G043590.1	CsaV3_3G043590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 113..145 e-value: 0.048 score: 22.8 coord: 79..108 e-value: 0.0054 score: 25.9 coord: 185..215 e-value: 3600.0 score: 0.9 coord: 147..176 e-value: 0.14 score: 21.2
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 79..103 score: 10.018
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 147..169 score: 9.377
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 113..135 score: 8.843
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 146..206 e-value: 1.8E-7 score: 31.5 coord: 75..135 e-value: 8.6E-10 score: 39.0
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 79..206 score: 22.437
IPR020683	Ankyrin repeat-containing domain	CDD	cd00204	ANK	coord: 76..206 e-value: 9.30951E-29 score: 108.625
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	G3DSA:1.25.40.20		coord: 31..255 e-value: 6.7E-27 score: 96.2
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	SSF48403	Ankyrin repeat	coord: 75..207
IPR026961	PGG domain	PFAM	PF13962	PGG	coord: 266..392 e-value: 2.1E-23 score: 82.2
None	No IPR available	PANTHER	PTHR24177	FAMILY NOT NAMED	coord: 231..424
None	No IPR available	PANTHER	PTHR24177:SF110	SUBFAMILY NOT NAMED	coord: 231..424
None	No IPR available	PANTHER	PTHR24177:SF110	SUBFAMILY NOT NAMED	coord: 74..219
None	No IPR available	PANTHER	PTHR24177	FAMILY NOT NAMED	coord: 74..219

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G043590	CSPI03G41130	Wild cucumber (PI 183967)	cpicucB145
CsaV3_3G043590	Cucsa.340880	Cucumber (Gy14) v1	cgycucB523
CsaV3_3G043590	CmaCh14G012450	Cucurbita maxima (Rimu)	cmacucB0283
CsaV3_3G043590	CmoCh14G012730	Cucurbita moschata (Rifu)	cmocucB0274
CsaV3_3G043590	CsGy3G038620	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G043590	Cla012588	Watermelon (97103) v1	cucwmB224
CsaV3_3G043590	MELO3C013066	Melon (DHL92) v3.5.1	cucmeB211
CsaV3_3G043590	MELO3C025814	Melon (DHL92) v3.5.1	cucmeB226
CsaV3_3G043590	ClCG07G013960	Watermelon (Charleston Gray)	cucwcgB262
CsaV3_3G043590	Lsi07G005990	Bottle gourd (USVL1VR-Ls)	cuclsiB254
CsaV3_3G043590	MELO3C013066.2	Melon (DHL92) v3.6.1	cucmedB204
CsaV3_3G043590	MELO3C025814.2	Melon (DHL92) v3.6.1	cucmedB219
CsaV3_3G043590	Bhi01G002143	Wax gourd	cucwgoB293

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G043590	Cucumber (Chinese Long) v3	cuccucB155
CsaV3_3G043590	Silver-seed gourd	carcucB0134
CsaV3_3G043590	Silver-seed gourd	carcucB0226
CsaV3_3G043590	Silver-seed gourd	carcucB1071
CsaV3_3G043590	Cucumber (Gy14) v2	cgybcucB327
CsaV3_3G043590	Cucumber (Gy14) v1	cgycucB546
CsaV3_3G043590	Cucurbita maxima (Rimu)	cmacucB0426
CsaV3_3G043590	Cucurbita maxima (Rimu)	cmacucB0538
CsaV3_3G043590	Cucurbita maxima (Rimu)	cmacucB1056
CsaV3_3G043590	Cucurbita moschata (Rifu)	cmocucB0421
CsaV3_3G043590	Cucurbita moschata (Rifu)	cmocucB0523
CsaV3_3G043590	Cucurbita moschata (Rifu)	cmocucB1038
CsaV3_3G043590	Cucurbita pepo (Zucchini)	cpecucB0155
CsaV3_3G043590	Cucurbita pepo (Zucchini)	cpecucB0380
CsaV3_3G043590	Cucurbita pepo (Zucchini)	cpecucB0695
CsaV3_3G043590	Cucurbita pepo (Zucchini)	cpecucB0751
CsaV3_3G043590	Wild cucumber (PI 183967)	cpicucB394
CsaV3_3G043590	Bottle gourd (USVL1VR-Ls)	cuclsiB190
CsaV3_3G043590	Melon (DHL92) v3.5.1	cucmeB185
CsaV3_3G043590	Melon (DHL92) v3.6.1	cucmedB176
CsaV3_3G043590	Watermelon (Charleston Gray)	cucwcgB190
CsaV3_3G043590	Watermelon (97103) v1	cucwmB201
CsaV3_3G043590	Watermelon (97103) v2	cucwmbB242
CsaV3_3G043590	Watermelon (97103) v2	cucwmbB260
CsaV3_3G043590	Wax gourd	cucwgoB349