CsaV3_3G042950 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G042950
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Ubiquitin-associated domain-containing protein 2
Location	chr3 : 34855320 .. 34863341 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAATAGTAGTTTCCAACCGTAGCGAGGAGGTGGGGGGAAGAGGAAGAGAAAGAGATATCGAATTTCCACTCCAAAATTCCAAACAGACGAAGACGACAAATCAAAATCAAATAGAGAAACAAGAAGAAGAAGAAGAAGAAGAAGGCTGTGACCGTCTGAGAGGATCGTTGCTTCCTCTCTGAGACGATGAACGGCGGCCCCTCCGGTTTTAGTACGTTCACTTCCACTCTTCTTTTCGATTCCTTAACCACCCATTTTACTCCTCAATTTCTTCTGATCCATTTTCCTCTACCTTTGTGTCCGCAGACAATGCCCCCGTCACCCGGACCTTCATCATCGCCTCCGCTCTTTTCACTATTTTCTTCGGGATCCAAGGCCGTTCAATTAAGCTTGGTTTGTCCTATCAGGTACTTCTCTTCCACTACCTTTGGTTTGATTTTGGGTTTTCTTTCTTTCATTAACATGACCCTTATTGCTTCTTTCAATGTTTGATTATCAATTCCCTGATTTATTGTGCTTGTATCTGTTGACTGGCAGCTACTTTTTCAATCTTAGGATTATATACCGAATTGGCCTTGTTGATTGTTGGGTAATTGATTTTTTCCCTCATGGGTGTAAGGACTTAGTTCAATTGATCTCTGCACTTTTTGTTTTGAATATAGTAGCCATCTCCGCCATTTTTTGGTTCTAGTTGGGTTTATATCTTTCTTTGTTGTTGAATGTGGAAAGAGTATTAGATATTGCCTTGTGGTTGGTTGTGCGGCATGTGAATAACCTATCGAACGAATAGGTGTACCTATCAGGAGGTGATGCACGTTTCTTAACATTTTGGGAGCCTGGTATAGATAATGTAAGTTTCCAGTTAAGTTATCTAATGAGATGTTGAGATGAGATAATACATCATATCCCATCAAAAAAGGTGGGTTAAAGAACTGGAATATTAGAGAGGGGAATGTAGTGTCGTTGGAAAAATAGTCTTGAAGTTTCTTTGGACGAAGTCAGGAAATTTGACACAAAGTTATTGTAAACAAATTTGGAATGGAATAAGCAAGTTGTTTTGAAAGAAGAAAATGAAATTAGTTGGTATCAACTATCCTTGATTGTCTTTCATCTAATAGCTAAGAATTAATTTTGAGAAGTTTTTGAAATTAAGATGGTGGTATAACAATAAAGTTGAAATTTGAGAGGATAGTTGGGTGGATGGGCAGCTTTTGAATGGGTACTAGTGTTATTACGTGCTACTGTACACATTGGAGTTGCAATCAAAGATTTTCAGGATTTGGTGACCAGAAGATAAAGATTCTACTGGATAAGGAGCTTACTAGAAGAGGAAATATCCGATTTTTGAAGGCTGATAGATTGGTTAAATGTGAAGCAATCAAGGATAGTTCAAGACAATAGAGCGTTGGTGCTTCTTGCTTCAAGGGAACTTCCAATGAGTTCTTTGCAGGCAGTGCTTTCATTTTATGAGAAATTTGGCTGGAGAGAAATTAAAGTTTTATTGGACAACAATTCTTTTGTGAATTTCATGCATAAATGATTTTTTTTTCTTATCAACAATTTTTTGAACTATGTTTGGTTCCTTATTGAGTTTCATGTATCTCCATTGGCTTCACGTTTTTCTTTTGCTTGGTTGGAGTTGCTTACTACGATTTTCCTCCTTTTGTTTGACCCTTTTCATTTCTATTATTTCATTTGTTCTCAATGTAAGGTTGGTTATTAAAAATAGGGGGAAAATCAATTTATACCCTAAACTTTTGGATTGTATCAATAAAAACAAACTAACAATTGCGTTAGTTTAAACCTTGGACTTTCTTAAGTGTACCCAATATACACACTCCTTCAGATTTCATTCAAAAAGCATCATGTGAGGAGTTATAATAGTTGCAACTAAATTCCCAAGTTATCAAAATGAATGGATTTAGGCCATTTATAAAGATTATCTTTGAATTTCCAACCAAAGGGTCCTCTCCCAGTTTTCCTCTTTCAACCTTTTGATGTGATGATTGATTTTTCTATGAACTCCATGCATTTCTGACTTGTTTTTCTTCTCTCTTTCTCGAAGTAATCTTGCATCGAAGGAATTTGTTTTCGATGTTTTCAAAGGGATTTTAACTTAATAACTTCTACACGTTTGGTACAGAGGACCTATTTTGTTTACACATTCTTATATATAGAATGCACGTTGTGTTGGTTTGATTAAAAAATTAAGATTATCTTTGAAAATGATTCATGCATAAGTTCTACATGTGTAATCTTTTCGAATATCAACTTAACAAGATTAGCATTGACTCATGGTCGATTTGTAAAGAAAATCTTAACGAAGACCATGGGAGTCTAAATTGGTTCATTTTATGAAAGTTTAGGGGTTTAATTGATAAAAGTATAAGTTTCATATGATGTTTATCTAAACATAATGTAATGGAGGGTATAAATTGATAAACTTACAAAAGTTTAGGGTTTAAATTAATAGAATTATTAGTTCAAAGGTATATATTGATATTTTCCTAAAATATATACATATATTGGGGAGGGAGAGATACAATTCCTCAAACCCCGGGACGGGGGGGTATGGGAGTGAATGAACATAGTAAGTTTGGAAGGCATATAGGTTCAAATGAGCCGTGGTAAAGGATCCACTTGTAGAAATATATATATTTTTTTATTGTTCTGACTGCTTCTATTCCATCTTTGTTGATATATTCCTATTATGGAGGACTTAGATTCAACTTATTTTATCTCTCTTCTACCTCTTAATTTTCCTGGTAGGGACTAGGGAGTAGACTTTTGACCAGTTAATTGTAATCCTTATGGCAGGATGTAATTGTGAAGCTCCGATTGTGGAAGTTAGTAATGTCAGTTTTTGCCTTTTCATCTACTCCTGAATTGATGTTCGGACTGTTTCTGCTATATTACTTCAGAGTATTTGAGAGACAAATAGGTTCCAACAAATACTCGGTAAGTTTTTTATTCAATTCATGCTGCAAGATCTCATTAAAACATATGTCATAATGAAGCTACCAGTCACGATCCTTAAAATGAATGGATCACAACAAAAATCTAATTGTTTTTTCCCTTAGTGATATGTGTTTTTTTCTTAAATAGATTTATATTAATACTCCATTGTGATACAGGTCTTTATATTGTTCTCTATAACATCCTCCTTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGGTATGCATTTTCGTTTAATATACTAGTATGCTTGGCAGCTAGGATAATTTTAACCCATGCTTAATTATTGTTTATTTTTTGCTGTCCATCCCTGTACTTTTCATTTTGTAGCTCTGAACTACCCTCCTCTTGTTACTTTTTCTCCCCTAATATTTGTAAAATAGGACCCAAAGTTTTTCTTAGCAAGTAGCTCACTTGTTGGGGAGTTAGTTGGGTATATTGACAATCGTGCCTGGTCTTTTGATATTTCTTGGCAAGTGTTTGGAAAGTTTTTATATATATTATATAAAAAAAACCTGTTTAGTTTCTTCTTCTGTTTACTTTTTTTCTTTTTTCTTTTGATGAGTCTCTACCTACTCATCTATGATGTAAACTCAGAATTAGAAAATCCAAATGAAATTTCATTATTTTCCTACAAAATAGGATAGTGGTGTCCAATATTTAGTAAGTGGGAAAGTGGAGCAGAAATATAGGAGTTAGTGGGCATGTTCTCTCCTAAAAGGTAGGAGATCATTGGACATGTTGAGTGGTCCTGGAGTAATGGGTAGTTGACGTTTTAACCTCCACTAGGACCACTCCCCCCTACTTCCTAGATTTTAGCTCCTCCCACCTATATGAATAGTGAGAGTCTTGGGGTTGTCGGACATCACACATAACATTCACTTTGATTACTTTTGTAAGAGTGAATTGCTGTCCAAAATTCTCTTGTAGAGTCGGTTTTGTATATTGTCCTTGATTGTGGTTTTTATAACCTTGTGAGTAAAGTGTTATTTCCACAAAGTGCACGCCTCTCCTTCCCTCCTTACGTGAGTTAGCCCCCCACAACCCACTTTAGGGTTCGTGTGACTTGGCCATACCTTTGGGGGGAAAATTGGGTCCAACATCTAGGCTGGTCAAGGTTGTACCTTGGCATCGCGTGGGAAAAATTTTGGGAAATCATTCTATCGCACTTCTGCCCCGTGACACCGCAGGTTATGTTTTTCTCAAGTTGGCTGTCCTCCAAGTTTTGGGCGCAATCTGACAACAAGCCCTCAATCTTTGGCTGTTTTAGGTTTAAGGAGAGTACATGACAACAGTAGTAATGATGGTGATTTAGGTTTAAGGAGAGTACAAGACAGCACTAGCAATGATGGTGATTTAGAGATGCTAGTTGAATGGATGGTGAATTGAATTATATCATTTTTTTCGATTGAGCCAAAGTTTGTTCCTTTTGCCTCGCTCTTACTTCGCTTCCCAAACCGGGGCCACACTTTTTCCCTCTATTTGGAAAGTGGAAGTTCTTACGACATTGTAAGTCCTTCACTTCTTTGCTTGGCAAGTTTTACATGGTAGAGTGAACACGTAGGATCATGTTTAGCGATTGTCTGCCTTTGTCTTGTGGCCCAATTGTTTTGTTATTGTCAGTAGGATCTTGGTCATCTTTTATGGGGTTGCAGTTTACTTTGTAGGGTGTTTGGTATGGCAGTGATGTTTAATAGGGATTGTCTTTCTATGATGGAGGGGGTCCTTATGAATGTCCTTATGAGTTCTCCCTTTTATGAGAAAAGAAAAGCTTTCTGGCTAGCTTGATTTTGTGCAATTCTGCGTGGAACGTGGCTTAGGTGGAATAGTAAAATTGTTAGGAGGTTGGAGAAGTTGTTCGAGATATGGGAAGTTCGTTAATTGGATTCTTTTTAATTTCCACGTTGCGTAATTCCTTTGGATTTGAGACCATTCTTGTAGCTAGTTGTGGACCTTTTTTCAGCTTGTTTTTTGTACTCTTGCATATTCCTTCATTTTTCTCAATGAAAGTTTGGTTTTTTACCATTTTTTTTTTAATTAAAAAAATTGAATCATAACTTCTTAGTTTGGTCAGGGAGCTTCTATTCCTTTTCTTTTGGGTTTGTTCATTCTTTGTTCAATTTGGAAGTAGTGAATGTGGCCTCTCTTCTTTATTTACTCAAAGGCCACTTCTTTAGGCGTGGGAGAAGGAAGTGAGAGTTTGGAGTCCCAATCCTTTGGACGGATTCTTCTGTAAGTCACTTTTGTAGTATGAGTGACCATTCTTCCTTAGGTAATTTGATATTTTCAATGCTTCAAAGAATGAGATCCCTAGAGAAGGGACGTTTTTTACTTGGCAAGTTTTACACCACTGACATGATGGTTTGACTTGTGAGGAAGTTGCCTTTGCTAGTCGGTTCATTTTTTTGCTTTCTTTGTTTGAAGACAGAAGATTTGGACCATATTCTATGGCGTTGTGAGTCTTTGAGTTTCCTGTGAGTCCAAGGACTCTAGTGATATGATCACCGCAATGGCTCTATTTGCCTCTTGAGAGAAGAATCACTTTTTATAGGTTATGTGGGGGAATAAAATAATAGGGTTTTTATAGGGTTTTGATTTCATGTTTCTCTTTGGACTTTGGTTTCAAAAACCTTTTGTAATTATTCTATAGGTGCTGTTTTGCATAGTTGGAGTCCCTTTTTTCTACTGGTATTTTTGTTTTGTAGACTTGGTTTTTTGTATGCACTTGTATTTTTATTTTTATTTTTTCTCAATGAAAGTTGTTTTCTATAGGAACAAAAATATTAATAATAAATTTATACCAAGTTTTTCAGGGTAGTTAAAATGCTTTAAAATGTTTCTCCATTTATAAGCATATATGGAAAGAGCACGAAAAAATGTATGAAAACATGTGGTTTGTTAGCTAAAACGAACTTGTATTGAGGGAGCCATGACCAAAATGCGAACTTAACGTGTGCTCAAAATCTCACCGACTCAGGATCTTAATGTGATCCAAACACGTTAAGTTTGTTTTTTGGTCATGTCTCCCTCGATACACGTTCTAGCTAACTGATGACTTGTTTTCCTAAGTTTCTTTTGTTGTTCTTTCCAACCATGCCTATAAACTGAACACATCCATGCTTATGATTTTCATTTAGTTAATATGTATTTTTATTTCTTTTTGAGCAGATCCTGCAGCAAATCTAGTGACTTCTGGACCTTATGGTCTTTTGTTTGCTTCCTTTGTACCCTTCTTCTTTGATATTCCTGTTTCAACACGGTTCCGTGTATTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTGGCTGGTCTTCAGGTTAAGGACTGTTTGTTTTATACTCTTTTGGATAACCTGCTTTACTTTCTTCAGCTGTGTAAGCTAGTTTTATTGTTGGTGTTGCAGCTCCTTCTGTCTTCGTGGAGAAGATCTATCTTACCAGGGATATGCGGAATTCTTGCTGGTTCCTTATATCGATTGAATGTATTTGGCATCCGCAAGGCCAAGGTTAAATTCAAATTTTGCTTAAGCACACATTGGTTTCTTAGTTTTCTTTCTTTCTGAAATTGTAATTCTGTTGTTTATAATTATAGTTTTATTTTGGACCTTTTGGTTTGATGCCCCACTTTGTTGGTTTGTTTTGTTTTAGTTCGGTTAGTCTCTTAGCTTCTTATGGGGGCTCTCTTTAAGTTTTTGGTGCTTCTTAGTTGTAGGTTTTTCATCTTATTTGGTTGGTGCACTTCATTAATTTTGTGTCTTTATTTGTCTTTTTAATTGAATGTTTTGTATTTTTTAGTATTAGTCTCTTTCCATTTGGAGTCAGTTTGATGTAGGTTTTCTTACTTTTCAATCAGGTCTTTCTAGTTTTCTAATAATGTGTTATTATTATTCTTCGGCTTTTACAGTTTCCAGAGTTTATCAGTTCATTTTTTTCAAGACTTTCTTTGCCATCTGCGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTAGAGGAAACATGCCATCCTTCATGAGCCGCCAGGTTGAGGTTAGTACATTTGACGAATGCTTCTATTTGGTGTTGGTTTCTCTAAACATACTTTGATAAGCTAAATGATTCGAGGAACAATATCTGACTTGTTAGGTTTTAAGCACGAGAACTTACTGTGTCCTGATAGTCGTCACAATATAGGCATTGCTATTATTGGCATAATCTAATCTTTACAGTTGTAATTAAGTTCGTATTGGTGACACAGAAAACATGAATTACTTAAGTTGATACTTTAACCTAAAAACTGGATTGTTTTCTCTTGGTCAAACTGAGGATGGTTCAATTGACATACCATTATGTTAACATAATAACTACGAGGTTTGTGATTCTCGATTCCCCCATTCTCAATTATACTAAAACCTGAATTGTTTCCTCCTATAATTTTAGAGGAACTATCCTTCTGTGCCAACTGCCACAGAACCATCGGAAGACGCCATTGCTACACTTGTTTCAATGGGGTTCGACAGAAACTCGGCCAGGCAGGCCCTTGTGCAGGCCAGAAACGACGTTAACATTGCGACAAACATACTTCTTGAATCACAATTGCACTAATTTGAAGAATTTTGTGGGGTCATATGAAAACTTTTGATGTCCCAAGTGGTCCGAGAAACAACCAAATTTGAGTATCGAGGGTTTTGATGAATTTGCTGACAACCGAGTTTTAATGGTTGGAGGAACTCACCGAGCTGTTTTTTTCTAAACTCTTTTGGGTTTCCGTTTTGTGTTCCTCTACCGTAGCTCTCAAATTTTATTGATAATTAATGTCTGATTACACAGATTGCTTATAGTTTGTAAGTCTTACTTCTAAGATCAAAACATCAAGTAGAAATGTTCATGGAACCATAATGTGCAGAATTCTTTTGTTATGTTATAATCTAAATTTTCAGATTCTTACACCATTTTTATTGGCTCCTAATCTTTGATTATTTAGAAAGCAAACAAATGCAATTTCTCTTCTTACTTTTGTGTAAATGTATAAATGTTTTATTCAGTCCCCTTGCAATC

mRNA sequence

ATGAACGGCGGCCCCTCCGGTTTTAACAATGCCCCCGTCACCCGGACCTTCATCATCGCCTCCGCTCTTTTCACTATTTTCTTCGGGATCCAAGGCCGTTCAATTAAGCTTGGTTTGTCCTATCAGGATGTAATTGTGAAGCTCCGATTGTGGAAGTTAGTAATGTCAGTTTTTGCCTTTTCATCTACTCCTGAATTGATGTTCGGACTGTTTCTGCTATATTACTTCAGAGTATTTGAGAGACAAATAGGTTCCAACAAATACTCGGTCTTTATATTGTTCTCTATAACATCCTCCTTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGATCCTGCAGCAAATCTAGTGACTTCTGGACCTTATGGTCTTTTGTTTGCTTCCTTTGTACCCTTCTTCTTTGATATTCCTGTTTCAACACGGTTCCGTGTATTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTGGCTGGTCTTCAGCTCCTTCTGTCTTCGTGGAGAAGATCTATCTTACCAGGGATATGCGGAATTCTTGCTGGTTCCTTATATCGATTGAATGTATTTGGCATCCGCAAGGCCAAGTTTCCAGAGTTTATCAGTTCATTTTTTTCAAGACTTTCTTTGCCATCTGCGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTAGAGGAAACATGCCATCCTTCATGAGCCGCCAGGTTGAGAGGAACTATCCTTCTGTGCCAACTGCCACAGAACCATCGGAAGACGCCATTGCTACACTTGTTTCAATGGGGTTCGACAGAAACTCGGCCAGGCAGGCCCTTGTGCAGGCCAGAAACGACGTTAACATTGCGACAAACATACTTCTTGAATCACAATTGCACTAA

Coding sequence (CDS)

ATGAACGGCGGCCCCTCCGGTTTTAACAATGCCCCCGTCACCCGGACCTTCATCATCGCCTCCGCTCTTTTCACTATTTTCTTCGGGATCCAAGGCCGTTCAATTAAGCTTGGTTTGTCCTATCAGGATGTAATTGTGAAGCTCCGATTGTGGAAGTTAGTAATGTCAGTTTTTGCCTTTTCATCTACTCCTGAATTGATGTTCGGACTGTTTCTGCTATATTACTTCAGAGTATTTGAGAGACAAATAGGTTCCAACAAATACTCGGTCTTTATATTGTTCTCTATAACATCCTCCTTACTTTTTGAGGTCCTTGCAATATCATTACTTAAAGATCCTGCAGCAAATCTAGTGACTTCTGGACCTTATGGTCTTTTGTTTGCTTCCTTTGTACCCTTCTTCTTTGATATTCCTGTTTCAACACGGTTCCGTGTATTTGGAGTTCGTTTCTCTGACAAGTCTTTCATATATCTGGCTGGTCTTCAGCTCCTTCTGTCTTCGTGGAGAAGATCTATCTTACCAGGGATATGCGGAATTCTTGCTGGTTCCTTATATCGATTGAATGTATTTGGCATCCGCAAGGCCAAGTTTCCAGAGTTTATCAGTTCATTTTTTTCAAGACTTTCTTTGCCATCTGCGGGGAATCCTCCAGCAGCCCCAAATAGAGATGTTAGAGGAAACATGCCATCCTTCATGAGCCGCCAGGTTGAGAGGAACTATCCTTCTGTGCCAACTGCCACAGAACCATCGGAAGACGCCATTGCTACACTTGTTTCAATGGGGTTCGACAGAAACTCGGCCAGGCAGGCCCTTGTGCAGGCCAGAAACGACGTTAACATTGCGACAAACATACTTCTTGAATCACAATTGCACTAA

Protein sequence

MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAFSSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTSGPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGNMPSFMSRQVERNYPSVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH

Homology

[Close]

BLAST of CsaV3_3G042950 vs. NCBI nr
Match: XP_004141121.1 (PREDICTED: ubiquitin-associated domain-containing protein 2 [Cucumis sativus] >KGN59722.1 hypothetical protein Csa_3G840970 [Cucumis sativus])

HSP 1 Score: 520.4 bits (1339), Expect = 4.0e-144
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRXXXXXXXXXXXXXXX 240
           AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRXXXXXXXXXXXXXXX
Sbjct: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRXXXXXXXXXXXXXXX 240

Query: 241 XXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 292
           XXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH
Sbjct: 241 XXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 291

[Close]

BLAST of CsaV3_3G042950 vs. NCBI nr
Match: XP_008464944.1 (PREDICTED: rhomboid-like protein 20 [Cucumis melo])

HSP 1 Score: 509.2 bits (1310), Expect = 9.2e-141
Identity = 284/291 (97.59%), Postives = 285/291 (97.94%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLR WKLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSI SSLLFEVLAISLLKDPAANLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRXXXXXXXXXXXXXXX 240
           AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVR XXXXXXXXXXXXXX
Sbjct: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGXXXXXXXXXXXXXX 240

Query: 241 XXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 292
           XX P+ATEP EDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQ H
Sbjct: 241 XXAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of CsaV3_3G042950 vs. NCBI nr
Match: XP_023516629.1 (rhomboid-like protein 20 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 496.9 bits (1278), Expect = 4.7e-137
Identity = 259/291 (89.00%), Postives = 265/291 (91.07%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60
           MNGGPSGFNNAPVTR F++ASALFTIFFGIQGRSIKLGLSYQDVIVKLR+WKLV SVFAF
Sbjct: 1   MNGGPSGFNNAPVTRNFVVASALFTIFFGIQGRSIKLGLSYQDVIVKLRIWKLVTSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSI +SLLFEVLAISLLKDPAANLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRXXXXXXXXXXXXXXX 240
           AGSLYRLNVFGIRKAKFPEF+SSFFSR SLPSAGNPPAAP RDVR               
Sbjct: 181 AGSLYRLNVFGIRKAKFPEFVSSFFSRFSLPSAGNPPAAPTRDVRGNMPSFVGRQVERSH 240

Query: 241 XXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 292
             VPTATEP ED+IATLVSMGFDRNSARQALV A NDVNIATNILLESQ H
Sbjct: 241 PPVPTATEPPEDSIATLVSMGFDRNSARQALVHAGNDVNIATNILLESQSH 291

[Close]

BLAST of CsaV3_3G042950 vs. NCBI nr
Match: XP_022930600.1 (rhomboid-like protein 20 [Cucurbita moschata])

HSP 1 Score: 495.4 bits (1274), Expect = 1.4e-136
Identity = 258/291 (88.66%), Postives = 266/291 (91.41%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60
           MNGGPSGFNNAPVTR+F++ASALFTIFFGIQGRSIKLGLSYQDVIVKLR+WKLV SVFAF
Sbjct: 1   MNGGPSGFNNAPVTRSFVVASALFTIFFGIQGRSIKLGLSYQDVIVKLRIWKLVTSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSI +SLLFEVLAISLLKDPAANLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIITSLLFEVLAISLLKDPAANLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRXXXXXXXXXXXXXXX 240
           AGSLYRLNVFGIRKAKFPEF+SSFFSR SLPSAGNPPAAP RDVR               
Sbjct: 181 AGSLYRLNVFGIRKAKFPEFVSSFFSRFSLPSAGNPPAAPTRDVRGNMPSFVGRQVERSH 240

Query: 241 XXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 292
             VPTATEP ED+IATLVSMGFDRNSARQALV A NDVNIAT+ILLESQ H
Sbjct: 241 PPVPTATEPPEDSIATLVSMGFDRNSARQALVHAGNDVNIATSILLESQSH 291

[Close]

BLAST of CsaV3_3G042950 vs. NCBI nr
Match: XP_022154191.1 (rhomboid-like protein 20 [Momordica charantia])

HSP 1 Score: 494.6 bits (1272), Expect = 2.3e-136
Identity = 260/292 (89.04%), Postives = 267/292 (91.44%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLR WKL+MSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLLMSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSI +SLLFEVLAISLLKDPA NLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIVTSLLFEVLAISLLKDPAVNLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPP-AAPNRDVRXXXXXXXXXXXXXX 240
           AGSLYRLNVFGIRKAKFPEFISSFFS+ SLPS GNPP AAPNRDVR              
Sbjct: 181 AGSLYRLNVFGIRKAKFPEFISSFFSQFSLPSVGNPPAAAPNRDVRGNMPSFTGRQVERN 240

Query: 241 XXXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 292
              VPTATEP ED+IATLVSMGFDRNSARQALV+ARNDVN+ATNILLE+Q H
Sbjct: 241 YPTVPTATEPPEDSIATLVSMGFDRNSARQALVRARNDVNMATNILLEAQSH 292

[Close]

BLAST of CsaV3_3G042950 vs. TAIR10
Match: AT3G56740.1 (Ubiquitin-associated (UBA) protein)

HSP 1 Score: 429.9 bits (1104), Expect = 1.3e-120
Identity = 220/293 (75.09%), Postives = 248/293 (84.64%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60
           MNGGPSGF+NAPVT+ F+I SALFT+FFGIQGRS KLGLSYQD+  K R+WKL+MS FAF
Sbjct: 1   MNGGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGL+LLYYFRVFERQIGSNKYSVFILFS T SLL EV+ +SLLKD  ANL+TS
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKDTTANLLTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGL+FASF+PF+ DIPVSTRFRVFGV FSDKSFIYLAG+QLLLSSW+RSI PGICGI+
Sbjct: 121 GPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGICGII 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGN-PPAAPNRD-VRXXXXXXXXXXXXX 240
           AGSLYRLN+ GIRKAKFPEF++SFFSRLS PS GN PP AP+R+ V              
Sbjct: 181 AGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTGRRAERS 240

Query: 241 XXXXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 292
               +P++ EPSE+AI TLVSMGFDRN+ARQALV ARNDVN ATNILLE+Q H
Sbjct: 241 QPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293

[Close]

BLAST of CsaV3_3G042950 vs. TAIR10
Match: AT2G41160.1 (Ubiquitin-associated (UBA) protein)

HSP 1 Score: 386.7 bits (992), Expect = 1.2e-107
Identity = 199/291 (68.38%), Postives = 231/291 (79.38%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60
           MNGGPSGFNNAPVT+ F+IA+ALFT+FFGI+G S KLGLSYQD+  K R+WKL++S FAF
Sbjct: 1   MNGGPSGFNNAPVTKAFVIATALFTVFFGIRGGSSKLGLSYQDIFEKFRIWKLIISAFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120
           SST +L+ GL+LLY+FRVFERQIGSNKYSVFI FS   SL+ E + +SL KDP ANL+TS
Sbjct: 61  SSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDPTANLLTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPY L+FASFVPFF DIPV+ RF V GV FSDKSFIYLAG+QLLLSSW+RSI  GICGI+
Sbjct: 121 GPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFTGICGII 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRXXXXXXXXXXXXXXX 240
           AGSLYRLN+FGIRKAKFPEF++S FSR SLPS  +    P R                  
Sbjct: 181 AGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPPRR----TSPNLGRQAVRAYR 240

Query: 241 XXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 292
             +P+ TEPSE+AIATLVSMGFD+N+ARQALV ARNDVN ATNILLE+  H
Sbjct: 241 APMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287

[Close]

BLAST of CsaV3_3G042950 vs. Swiss-Prot
Match: sp|Q9LET3|RBL20_ARATH (Rhomboid-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=RBL20 PE=2 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 2.3e-119
Identity = 220/293 (75.09%), Postives = 248/293 (84.64%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60
           MNGGPSGF+NAPVT+ F+I SALFT+FFGIQGRS KLGLSYQD+  K R+WKL+MS FAF
Sbjct: 1   MNGGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGL+LLYYFRVFERQIGSNKYSVFILFS T SLL EV+ +SLLKD  ANL+TS
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKDTTANLLTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGL+FASF+PF+ DIPVSTRFRVFGV FSDKSFIYLAG+QLLLSSW+RSI PGICGI+
Sbjct: 121 GPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGICGII 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGN-PPAAPNRD-VRXXXXXXXXXXXXX 240
           AGSLYRLN+ GIRKAKFPEF++SFFSRLS PS GN PP AP+R+ V              
Sbjct: 181 AGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTGRRAERS 240

Query: 241 XXXXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 292
               +P++ EPSE+AI TLVSMGFDRN+ARQALV ARNDVN ATNILLE+Q H
Sbjct: 241 QPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293

[Close]

BLAST of CsaV3_3G042950 vs. Swiss-Prot
Match: sp|Q8RXQ2|RBL18_ARATH (Rhomboid-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=RBL18 PE=2 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 2.2e-106
Identity = 199/291 (68.38%), Postives = 231/291 (79.38%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60
           MNGGPSGFNNAPVT+ F+IA+ALFT+FFGI+G S KLGLSYQD+  K R+WKL++S FAF
Sbjct: 1   MNGGPSGFNNAPVTKAFVIATALFTVFFGIRGGSSKLGLSYQDIFEKFRIWKLIISAFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120
           SST +L+ GL+LLY+FRVFERQIGSNKYSVFI FS   SL+ E + +SL KDP ANL+TS
Sbjct: 61  SSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDPTANLLTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPY L+FASFVPFF DIPV+ RF V GV FSDKSFIYLAG+QLLLSSW+RSI  GICGI+
Sbjct: 121 GPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFTGICGII 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRXXXXXXXXXXXXXXX 240
           AGSLYRLN+FGIRKAKFPEF++S FSR SLPS  +    P R                  
Sbjct: 181 AGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPPRR----TSPNLGRQAVRAYR 240

Query: 241 XXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 292
             +P+ TEPSE+AIATLVSMGFD+N+ARQALV ARNDVN ATNILLE+  H
Sbjct: 241 APMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287

[Close]

BLAST of CsaV3_3G042950 vs. Swiss-Prot
Match: sp|Q4R910|UBAC2_MACFA (Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis OX=9541 GN=UBAC2 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.4e-15
Identity = 85/343 (24.78%), Postives = 142/343 (41.40%), Query Frame = 0


Query: 4   GPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVK--LRLWKLVMSVFAFS 63
           G SG   AP++++ ++  +  ++   +     +    Y    VK   ++W+L+       
Sbjct: 6   GSSGLYKAPLSKSLLLVPSALSLLLALLLPHCQKLFVYDLHAVKNDFQIWRLICGRIICL 65

Query: 64  STPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLK----DPAANL 123
              +      L+Y FR+FER+ GS K++ F+L S   S LF+ L +  ++      AA+ 
Sbjct: 66  DLKDTFCSSLLIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLVEAMQYFFGITAASN 125

Query: 124 VTSGPYGLLFASFVPFFFDIPVSTRFRVFG-VRFSDKSFIYLAGLQLLLSS---WRRSIL 183
           + SG    +FA FVPF+  IP     ++ G +  ++K+ IY+ GLQL  S    W    +
Sbjct: 126 LPSGFLAPVFALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----I 185

Query: 184 PGICGILAGSLYRLNVFGIRKAK-FPEFISSFFSRLSLP--SAGNPPA------------ 243
             I G+++G  Y   +F + +    P +++ FFS    P  S+  P +            
Sbjct: 186 VAISGLMSGLCYNSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGATLDI 245

Query: 244 ------------------APNRDVR----------------XXXXXXXXXXXXXXXXXVP 288
                             A  R  R                                  P
Sbjct: 246 QRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAAP 305

[Close]

BLAST of CsaV3_3G042950 vs. Swiss-Prot
Match: sp|Q8NBM4|UBAC2_HUMAN (Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBAC2 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-14
Identity = 87/342 (25.44%), Postives = 143/342 (41.81%), Query Frame = 0


Query: 4   GPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVK--LRLWKLVMSVFAFS 63
           G SG   AP++++ ++  +  ++   +     +    Y    VK   ++W+L+       
Sbjct: 6   GSSGLYKAPLSKSLLLVPSALSLLLALLLPHCQKLFVYDLHAVKNDFQIWRLICGRIICL 65

Query: 64  STPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLK----DPAANL 123
              +      L+Y FR+FER+ GS K++ F+L S   S LF+ L I  ++      AA+ 
Sbjct: 66  DLKDTFCSSLLIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLIEAMQYFFGITAASN 125

Query: 124 VTSGPYGLLFASFVPFFFDIPVSTRFRVFG-VRFSDKSFIYLAGLQLLLSS---WRRSIL 183
           + SG    +FA FVPF+  IP     ++ G +  ++K+ IY+ GLQL  S    W    +
Sbjct: 126 LPSGFLAPVFALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----I 185

Query: 184 PGICGILAGSLYRLNVFGIRKAK-FPEFISSFFSRLSLP--SAGNPPA------------ 243
             I G+++G  Y   +F + +    P +++ FFS    P  S+  P +            
Sbjct: 186 VAISGLMSGLCYDSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGATLDI 245

Query: 244 ------------------APNRDVR-------------XXXXXXXXXXXXXXXXXVPTA- 288
                             A  R  R                               P A 
Sbjct: 246 QRQQRMELLDRQLMFSQFAQGRRQRQQQGGMINWNRLFPPLRQRQNVNYQGGRQSEPAAP 305

[Close]

BLAST of CsaV3_3G042950 vs. Swiss-Prot
Match: sp|Q8R1K1|UBAC2_MOUSE (Ubiquitin-associated domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ubac2 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.9e-12
Identity = 82/350 (23.43%), Postives = 137/350 (39.14%), Query Frame = 0


Query: 4   GPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVK--LRLWKLVMSVFAFS 63
           G SG   AP++++ ++  +  ++   +     +    Y    VK  L++W+L+       
Sbjct: 6   GSSGLYKAPLSKSLLLVPSALSLLLTLLLPHCQKFFVYDLHAVKHDLQIWRLICGRIICL 65

Query: 64  STPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTSG 123
              +      L+Y FR+FER+ GS K++ F+L S   S LF+ + +  ++      V S 
Sbjct: 66  DLKDAFCSGLLIYNFRIFERRYGSRKFASFLLGSWVLSALFDFILVEAVQYSLGVTVASN 125

Query: 124 -PYGLL---FASFVPFFFDIPVSTRFRVFG-VRFSDKSFIYLAGLQLLLSS---WRRSIL 183
            P G L   FA FVPF   IP     ++ G +  ++K+ IY+ GLQL  S    W    +
Sbjct: 126 LPSGFLAPVFALFVPFHCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSGSYIW----I 185

Query: 184 PGICGILAGSLYRLNVFGIRKA-KFPEFISSFFSRLSLPSAGN----------------- 243
             + G+++G  Y   V  + +  + P  ++ FFS    P   +                 
Sbjct: 186 VAMSGLISGMCYDRKVLQVHQVLRIPGRMAEFFSWALEPIFSSSEPTSEARVGMGATVDI 245

Query: 244 --------------------------------------PPAAPNRDVRXXXXXXXXXXXX 288
                                                 PP    R++             
Sbjct: 246 QRQQRMEQLDRQLMLSQFAQVRRQRQQQGGMINWNRLFPPLRQRRNIN-------YQDGP 305

[Close]

BLAST of CsaV3_3G042950 vs. TrEMBL
Match: tr|A0A0A0LG81|A0A0A0LG81_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G840970 PE=4 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 2.6e-144
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRXXXXXXXXXXXXXXX 240
           AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRXXXXXXXXXXXXXXX
Sbjct: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRXXXXXXXXXXXXXXX 240

Query: 241 XXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 292
           XXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH
Sbjct: 241 XXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 291

[Close]

BLAST of CsaV3_3G042950 vs. TrEMBL
Match: tr|A0A1S3CMQ9|A0A1S3CMQ9_CUCME (rhomboid-like protein 20 OS=Cucumis melo OX=3656 GN=LOC103502692 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 6.1e-141
Identity = 284/291 (97.59%), Postives = 285/291 (97.94%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60
           MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLR WKLVMSVFAF
Sbjct: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRFWKLVMSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSI SSLLFEVLAISLLKDPAANLVTS
Sbjct: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSIISSLLFEVLAISLLKDPAANLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL
Sbjct: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRXXXXXXXXXXXXXXX 240
           AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVR XXXXXXXXXXXXXX
Sbjct: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDVRGXXXXXXXXXXXXXX 240

Query: 241 XXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 292
           XX P+ATEP EDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQ H
Sbjct: 241 XXAPSATEPPEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQSH 291

[Close]

BLAST of CsaV3_3G042950 vs. TrEMBL
Match: tr|A0A2P4I7W2|A0A2P4I7W2_QUESU (Rhomboid-like protein 20 OS=Quercus suber OX=58331 GN=CFP56_18872 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 1.7e-122
Identity = 230/292 (78.77%), Postives = 254/292 (86.99%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60
           MNGGPSGFNNAPVTR FIIASALFT+FFGIQGRS KLGLSY D+  KLR+WKL+ SVFAF
Sbjct: 1   MNGGPSGFNNAPVTRAFIIASALFTVFFGIQGRSAKLGLSYLDIFGKLRIWKLIASVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120
           SSTPEL+FGL+LLYYFRVFERQIGSNKYSVFILFS+ +SLLFEVLA++LLKDPA NLVTS
Sbjct: 61  SSTPELLFGLYLLYYFRVFERQIGSNKYSVFILFSVIASLLFEVLALALLKDPAVNLVTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGL+FASFVPFF DIPVST FRVFGVRFSDKSFIYLAGLQLLLSSW+RSILPGICGIL
Sbjct: 121 GPYGLIFASFVPFFLDIPVSTWFRVFGVRFSDKSFIYLAGLQLLLSSWKRSILPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRD-VRXXXXXXXXXXXXXX 240
           AGSLYRLNVF IRKAKFPEF++SFFSRL  P+ G+PP+AP R+ V               
Sbjct: 181 AGSLYRLNVFRIRKAKFPEFVTSFFSRLPWPTTGSPPSAPTRNIVGNVPSYAGRQVERNY 240

Query: 241 XXXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 292
              +P+A EP ED+IATLVSMGFDRNSARQALV ARND+N+ATNILLE+Q H
Sbjct: 241 PSSMPSAIEPPEDSIATLVSMGFDRNSARQALVHARNDINVATNILLEAQSH 292

[Close]

BLAST of CsaV3_3G042950 vs. TrEMBL
Match: tr|A0A0D2V7D6|A0A0D2V7D6_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G001400 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 4.1e-121
Identity = 224/293 (76.45%), Postives = 252/293 (86.01%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60
           MNGGPSGFNNAPVT+TF+IASALFT+FFGIQGRS KLGLSYQD+  KL +WKL+ SVFAF
Sbjct: 1   MNGGPSGFNNAPVTKTFVIASALFTVFFGIQGRSFKLGLSYQDIFTKLSIWKLITSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGL+LLYYFRVFERQIGSNKYSVFILFS+ +S LFEV+A+++LKDP +NL+TS
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVMASFLFEVMAVAILKDPTSNLLTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGL+FASFVPFFFDIPVST FR+FGVRFS+KSFIYLAGLQLLLSSW+RS+LPGICGIL
Sbjct: 121 GPYGLIFASFVPFFFDIPVSTWFRIFGVRFSNKSFIYLAGLQLLLSSWKRSLLPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDV--RXXXXXXXXXXXXX 240
           AGSLYRLNVF IRKAKFPEFI+SFFSRLS PS GNPP  P R++                
Sbjct: 181 AGSLYRLNVFRIRKAKFPEFITSFFSRLSWPSIGNPPTTPARNLAGNVPSYTTRQVERTY 240

Query: 241 XXXXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 292
                 +A EPSEDA+ATLVSMGFD+NSARQALV ARND+N ATNILLE+Q H
Sbjct: 241 PSAVASSAIEPSEDAVATLVSMGFDQNSARQALVHARNDINAATNILLEAQSH 293

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BLAST of CsaV3_3G042950 vs. TrEMBL
Match: tr|A0A1U8MDL4|A0A1U8MDL4_GOSHI (rhomboid-like protein 20 isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107935547 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.2e-120
Identity = 223/293 (76.11%), Postives = 252/293 (86.01%), Query Frame = 0


Query: 1   MNGGPSGFNNAPVTRTFIIASALFTIFFGIQGRSIKLGLSYQDVIVKLRLWKLVMSVFAF 60
           MNGGPSGFNNAPVT+TF+IASALFT+FFGIQGRS KLGLSYQD+  KL +WKL+ SVFAF
Sbjct: 1   MNGGPSGFNNAPVTKTFVIASALFTVFFGIQGRSFKLGLSYQDIFTKLSIWKLITSVFAF 60

Query: 61  SSTPELMFGLFLLYYFRVFERQIGSNKYSVFILFSITSSLLFEVLAISLLKDPAANLVTS 120
           SSTPELMFGL+LLYYFRVFERQIGSNKYSVFILFS+ +S LFEV+A+++LKDP +NL+TS
Sbjct: 61  SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSVMASFLFEVMAVAILKDPTSNLLTS 120

Query: 121 GPYGLLFASFVPFFFDIPVSTRFRVFGVRFSDKSFIYLAGLQLLLSSWRRSILPGICGIL 180
           GPYGL+FASFVPFFFDIPVST FR+FGVRFS+KSFIYLAGLQLLLSSW+RS+LPGICGIL
Sbjct: 121 GPYGLIFASFVPFFFDIPVSTWFRIFGVRFSNKSFIYLAGLQLLLSSWKRSLLPGICGIL 180

Query: 181 AGSLYRLNVFGIRKAKFPEFISSFFSRLSLPSAGNPPAAPNRDV--RXXXXXXXXXXXXX 240
           AGSLYRLNVF IRKAKFPEFI+SFFSRLS PS GNPP  P R++                
Sbjct: 181 AGSLYRLNVFRIRKAKFPEFITSFFSRLSWPSIGNPPTTPARNLAGNVPSYTTRQVERTY 240

Query: 241 XXXXVPTATEPSEDAIATLVSMGFDRNSARQALVQARNDVNIATNILLESQLH 292
                 +A EPSEDA+ATLVSMGFD+NSAR+ALV ARND+N ATNILLE+Q H
Sbjct: 241 PSAVASSAIEPSEDAVATLVSMGFDQNSARRALVHARNDINAATNILLEAQSH 293

The following BLAST results are available for this feature:

BLAST of CsaV3_3G042950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141121.1	4.0e-144	100.00	PREDICTED: ubiquitin-associated domain-containing protein 2 [Cucumis sativus] >K...	[more]
XP_008464944.1	9.2e-141	97.59	PREDICTED: rhomboid-like protein 20 [Cucumis melo]	[more]
XP_023516629.1	4.7e-137	89.00	rhomboid-like protein 20 [Cucurbita pepo subsp. pepo]	[more]
XP_022930600.1	1.4e-136	88.66	rhomboid-like protein 20 [Cucurbita moschata]	[more]
XP_022154191.1	2.3e-136	89.04	rhomboid-like protein 20 [Momordica charantia]	[more]

BLAST of CsaV3_3G042950 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G56740.1	1.3e-120	75.09	Ubiquitin-associated (UBA) protein	[more]
AT2G41160.1	1.2e-107	68.38	Ubiquitin-associated (UBA) protein	[more]

BLAST of CsaV3_3G042950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LET3\|RBL20_ARATH	2.3e-119	75.09	Rhomboid-like protein 20 OS=Arabidopsis thaliana OX=3702 GN=RBL20 PE=2 SV=1	[more]
sp\|Q8RXQ2\|RBL18_ARATH	2.2e-106	68.38	Rhomboid-like protein 18 OS=Arabidopsis thaliana OX=3702 GN=RBL18 PE=2 SV=1	[more]
sp\|Q4R910\|UBAC2_MACFA	2.4e-15	24.78	Ubiquitin-associated domain-containing protein 2 OS=Macaca fascicularis OX=9541 ...	[more]
sp\|Q8NBM4\|UBAC2_HUMAN	1.5e-14	25.44	Ubiquitin-associated domain-containing protein 2 OS=Homo sapiens OX=9606 GN=UBAC...	[more]
sp\|Q8R1K1\|UBAC2_MOUSE	1.9e-12	23.43	Ubiquitin-associated domain-containing protein 2 OS=Mus musculus OX=10090 GN=Uba...	[more]

BLAST of CsaV3_3G042950 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LG81\|A0A0A0LG81_CUCSA	2.6e-144	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G840970 PE=4 SV=1	[more]
tr\|A0A1S3CMQ9\|A0A1S3CMQ9_CUCME	6.1e-141	97.59	rhomboid-like protein 20 OS=Cucumis melo OX=3656 GN=LOC103502692 PE=4 SV=1	[more]
tr\|A0A2P4I7W2\|A0A2P4I7W2_QUESU	1.7e-122	78.77	Rhomboid-like protein 20 OS=Quercus suber OX=58331 GN=CFP56_18872 PE=4 SV=1	[more]
tr\|A0A0D2V7D6\|A0A0D2V7D6_GOSRA	4.1e-121	76.45	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G001400 PE=4 ...	[more]
tr\|A0A1U8MDL4\|A0A1U8MDL4_GOSHI	1.2e-120	76.11	rhomboid-like protein 20 isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC10793554...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0004252	serine-type endopeptidase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR009060	UBA-like_sf
IPR022764	Peptidase_S54_rhomboid_dom
IPR015940	UBA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G042950.1	CsaV3_3G042950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015940	Ubiquitin-associated domain	SMART	SM00165	uba_6	coord: 250..287 e-value: 4.0E-10 score: 49.6
IPR015940	Ubiquitin-associated domain	PFAM	PF00627	UBA	coord: 250..285 e-value: 1.1E-11 score: 44.3
IPR015940	Ubiquitin-associated domain	PROSITE	PS50030	UBA	coord: 248..288 score: 14.836
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 48..189 e-value: 7.8E-5 score: 22.6
None	No IPR available	GENE3D	G3DSA:1.10.8.10		coord: 230..290 e-value: 3.0E-13 score: 51.6
None	No IPR available	PANTHER	PTHR44474	FAMILY NOT NAMED	coord: 1..288
None	No IPR available	SUPERFAMILY	SSF144091	Rhomboid-like	coord: 9..186
IPR009060	UBA-like superfamily	SUPERFAMILY	SSF46934	UBA-like	coord: 233..288

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G042950	CSPI03G40420	Wild cucumber (PI 183967)	cpicucB145
CsaV3_3G042950	Cucsa.340180	Cucumber (Gy14) v1	cgycucB523
CsaV3_3G042950	CmaCh14G011210	Cucurbita maxima (Rimu)	cmacucB0293
CsaV3_3G042950	Cla017141	Watermelon (97103) v1	cucwmB208
CsaV3_3G042950	MELO3C026597	Melon (DHL92) v3.5.1	cucmeB218
CsaV3_3G042950	ClCG10G013700	Watermelon (Charleston Gray)	cucwcgB199
CsaV3_3G042950	Lsi03G013350	Bottle gourd (USVL1VR-Ls)	cuclsiB203
CsaV3_3G042950	MELO3C026597.2	Melon (DHL92) v3.6.1	cucmedB211
CsaV3_3G042950	Cla97C10G196470	Watermelon (97103) v2	cucwmbB187
CsaV3_3G042950	Bhi11G001335	Wax gourd	cucwgoB241

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G042950	Cucumber (Gy14) v2	cgybcucB117