CsaV3_3G042310 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G042310
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr3 : 34390314 .. 34393553 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAACAGTATTTACACAATCCTCACTATTGGTCGCTGGGAGTCACTGAATCACATGAACTATAAGTTCGCTTCACTAAGACCAATTCATGGAGTTTTAGCGCTGAAATTCCTCAAGTGGGTCATCAAACAGCCTGGTTTGGAACCCAACCACCTCACTCATATACTCGGTATTACTACTCATGTACTTGTTAAAGCTAGACTGTACGGTTATGCCAAATCAATTCTGAAGCATTTAGCTCAGAAAAATTCTGGGTCCAACTTTCTTTTTGGTGTTCTTATGGATACATACCCTCTTTGCAGCTCAAACCCTGCAGTTTTTGACCTTTTAATTAGAGTTTATTTGCGGCAAGGAATGGTTGGACACGCTGTAAATACTTTTTCTTCCATGCTCATTCGTGGGTTTAAGCCATCTGTTTATACTTGTAACATGATCATGGCTTCCATGGTTAAGAACTGTAGAGCTCACTTGGTTTGGTCTTTTTTTAAGCAAATGCTTACCAGTAGAGTTTGTCCAAACGTTTCCAGTTTTAATATACTGATAAGTGTTTTATGTGTGCAAGGGAAGCTTAAGAAAGCTGTTAACATCTTAACAATGATGGAGAGGAATGGCTATGTTCCTACTATAGTTAGTTATAATACGTTGCTTAGTTGGTGCTGTAAGAAGGGAAGATTTAAATTTGCACTTGTGCTGATTCATCATATGGAGTGCAAGGGAATTCAAGCAGACGTCTGTACATACAATATGTTTATTGATAGTTTGTGCAGAAACAGTAGAAGCGCACAGGGGTATTTAGTTTTGAAGAAAATGAGGAATAAGATGATAACTCCTAATGAAGTTTCTTACAACACCTTGATTAATGGCTTTGTAAAGGAGGGAAAGATAGGGGTTGCTACTCGGGTTTTCAATGAGATGATAGAGCTTAATCTTTCACCAAACCTCATAACTTACAATATTCTAATTAATGGATACTGCATTAATGGCAATTTTGAAGAAGCATTGAGAGTTTTGGATGTGATGGAAGCAAATGACGTGAGGCCTAATGAGGTTACTATTGGAACTCTTTTAAATGGTCTATACAAGAGTGCCAAATTTGACGTAGCTAGAAATATTCTGGAGAGATATTGTATCAATAGAACATCTCTTAATTGTATCTCACATACTGTGATGATTGATGGGCTATGCAGAAATGGGTTGCTTGATGAAGCCTTTCAATTACTGATTGAGATGTGCAAGGATGGTGTTCATCCTGATATCATAACTTTTTCAGTGCTTATAAATGGATTCTGCAAGGTTGGGAATATTAACAAGGCAAAGGAGGTTATGTCGAAAATATATAGAGAAGGATTTGTTCCAAACAATGTTATTTTCTCTACATTAATATATAACTCTTGTAAGGTTGGAAATGTTTATGAAGCGATGAAGTTCTATGCTGCTATGAATTTGAATGGGCAAAATGCAGACAATTTCACATGTAATTCGTTAGTCGCTTCTCTTTGTGAAAATGGAAAACTAGTAGAAGCAGAGGAATTCTTGCATCACATTAGTAGGATTGGTCTTGTTCCTAACTCTGTTACATTTGATTGTATCATAAACGGATATGCAAATGTAGGAGATGGGTCAGGGGCATTTTCAGTGTTTGATAGAATGATTAGTTGTGGTCATCACCCTAGTCCTTTCACCTATGGCAGTCTATTGAAAGTGTTATGCAAGGGACAGAATTTTTGGGAAGCAAGAAAACTATTGAAAAAGCTCCACTGCATTCCGTTGGCTGTTGATACTATATCGTACAACACATTGATTGTTGAGATAAGTAAGTCAGGAAATTTATTGGAAGCAGTTCGCCTATTTGAGGAGATGATTCAGAATAATATTCTACCGGATAGTTATACATACACTTGTATTCTGTCTGGATTAATTAGAGAAGGGAGATTGGTCTGTGCCTTCATATTCTTGGGAAGACTCATGCAAAAAGAAATTCTAACATTGAATTCAATTGTGTACACTTGTTTCATTGATGGCCTTTTCAAGGCTGGCCAGTCAAAGGCTGCATTATATCTTTTTAAGGAAATGGAGGAAAAAGGCCTCTCCTTAGATTTGATTGCTCTTAATTCAATTACAGATGGATATTCAAGGATGGGAAAAGTGTTTAGTGCCAGTTCTCTCATTTCAAAAACGAGAAACAAAAATGTAATACCTAACTTGACTACATTTAATATATTGCTACATGGTTACTCCAGAGGACAGGATATAATGAGTTGCTTTAAGTTGTATAACCTTATGAGGAGATCGGGCTTTTTTCCTAACAGATTAACATACCATTCTCTTATTCTTGGACTTTGCAACCATGGTATGTTGGAACTTGGAATTAAGATGTTGAAAATGTTTATTGCTGAAAGTTCTACTATTGATGACTTGACATTTAATATGCTCATTAGGAAGTGTTGTGAAATCAATGACCTGGATAAAGTCATTGATTTGACTCATAACATGGAAGTCTTTAGGGTTTCTCTCGATAAAGACACACAAAAAGCCGTTACTGATGTGCTTGTTAGAAGGATGGTTTCCCAAAATTATTTCGTTTTTATGCATGAAATGCTCAAAAAGGGTTTTATCCCTACATCTAAACAATATTGCACAATGATGAAACGAATGTGTCGAGTGGGGGACATACAGGGGGCATTTAAATTAAAAGATCAGATGGTGGCACTTGGCATAAGTTTGGACGATGCCGCAGAATGTGCTATGGTTCGAGGGCTTGCACTTTGTGGGAAAATTGAAGAGGCAATGTGGATTCTTCAAAGGATGCTTAGGATGAAGAAAATTCCTACTACCAGCACGTTTACAACTTTGATGCACGTCTTCTGTAAAAAAGACAATTTTAAAGAGGCACATAATTTGAAGATCCTTATGGAGCATTATCGTGTGAAGCTTGATATAGTCGCTTACAATGTTCTCATTTCTGCGTGTTGCGCTAATGGTGATGTTATAACTGCACTTGACTTTTACGAAGAGATAAAACAGAAAGGTCTCTTGCCAAACATGACGACCTACAGAGTTCTAGTTTCTGCTATTAGTACAAAGCATTATGTTTCTAGGGGTGAAATAGTTCTCAAGGACTTGAATGATAGAGGATTAGTGTCTGGGTATTTAGATGGGAAGTCGCAAAAATCTTGCAGGGATTTTGTAGTTGCCATTAAAAAACTGAACTCCTTAAAGCCCAATCAAGGAAATTAA

mRNA sequence

ATGGAGAACAGTATTTACACAATCCTCACTATTGGTCGCTGGGAGTCACTGAATCACATGAACTATAAGTTCGCTTCACTAAGACCAATTCATGGAGTTTTAGCGCTGAAATTCCTCAAGTGGGTCATCAAACAGCCTGGTTTGGAACCCAACCACCTCACTCATATACTCGGTATTACTACTCATGTACTTGTTAAAGCTAGACTGTACGGTTATGCCAAATCAATTCTGAAGCATTTAGCTCAGAAAAATTCTGGGTCCAACTTTCTTTTTGGTGTTCTTATGGATACATACCCTCTTTGCAGCTCAAACCCTGCAGTTTTTGACCTTTTAATTAGAGTTTATTTGCGGCAAGGAATGGTTGGACACGCTGTAAATACTTTTTCTTCCATGCTCATTCGTGGGTTTAAGCCATCTGTTTATACTTGTAACATGATCATGGCTTCCATGGTTAAGAACTGTAGAGCTCACTTGGTTTGGTCTTTTTTTAAGCAAATGCTTACCAGTAGAGTTTGTCCAAACGTTTCCAGTTTTAATATACTGATAAGTGTTTTATGTGTGCAAGGGAAGCTTAAGAAAGCTGTTAACATCTTAACAATGATGGAGAGGAATGGCTATGTTCCTACTATAGTTAGTTATAATACGTTGCTTAGTTGGTGCTGTAAGAAGGGAAGATTTAAATTTGCACTTGTGCTGATTCATCATATGGAGTGCAAGGGAATTCAAGCAGACGTCTGTACATACAATATGTTTATTGATAGTTTGTGCAGAAACAGTAGAAGCGCACAGGGGTATTTAGTTTTGAAGAAAATGAGGAATAAGATGATAACTCCTAATGAAGTTTCTTACAACACCTTGATTAATGGCTTTGTAAAGGAGGGAAAGATAGGGGTTGCTACTCGGGTTTTCAATGAGATGATAGAGCTTAATCTTTCACCAAACCTCATAACTTACAATATTCTAATTAATGGATACTGCATTAATGGCAATTTTGAAGAAGCATTGAGAGTTTTGGATGTGATGGAAGCAAATGACGTGAGGCCTAATGAGGTTACTATTGGAACTCTTTTAAATGGTCTATACAAGAGTGCCAAATTTGACGTAGCTAGAAATATTCTGGAGAGATATTGTATCAATAGAACATCTCTTAATTGTATCTCACATACTGTGATGATTGATGGGCTATGCAGAAATGGGTTGCTTGATGAAGCCTTTCAATTACTGATTGAGATGTGCAAGGATGGTGTTCATCCTGATATCATAACTTTTTCAGTGCTTATAAATGGATTCTGCAAGGTTGGGAATATTAACAAGGCAAAGGAGGTTATGTCGAAAATATATAGAGAAGGATTTGTTCCAAACAATGTTATTTTCTCTACATTAATATATAACTCTTGTAAGGTTGGAAATGTTTATGAAGCGATGAAGTTCTATGCTGCTATGAATTTGAATGGGCAAAATGCAGACAATTTCACATGTAATTCGTTAGTCGCTTCTCTTTGTGAAAATGGAAAACTAGTAGAAGCAGAGGAATTCTTGCATCACATTAGTAGGATTGGTCTTGTTCCTAACTCTGTTACATTTGATTGTATCATAAACGGATATGCAAATGTAGGAGATGGGTCAGGGGCATTTTCAGTGTTTGATAGAATGATTAGTTGTGGTCATCACCCTAGTCCTTTCACCTATGGCAGTCTATTGAAAGTGTTATGCAAGGGACAGAATTTTTGGGAAGCAAGAAAACTATTGAAAAAGCTCCACTGCATTCCGTTGGCTGTTGATACTATATCGTACAACACATTGATTGTTGAGATAAGTAAGTCAGGAAATTTATTGGAAGCAGTTCGCCTATTTGAGGAGATGATTCAGAATAATATTCTACCGGATAGTTATACATACACTTGTATTCTGTCTGGATTAATTAGAGAAGGGAGATTGGTCTGTGCCTTCATATTCTTGGGAAGACTCATGCAAAAAGAAATTCTAACATTGAATTCAATTGTGTACACTTGTTTCATTGATGGCCTTTTCAAGGCTGGCCAGTCAAAGGCTGCATTATATCTTTTTAAGGAAATGGAGGAAAAAGGCCTCTCCTTAGATTTGATTGCTCTTAATTCAATTACAGATGGATATTCAAGGATGGGAAAAGTGTTTAGTGCCAGTTCTCTCATTTCAAAAACGAGAAACAAAAATGTAATACCTAACTTGACTACATTTAATATATTGCTACATGGTTACTCCAGAGGACAGGATATAATGAGTTGCTTTAAGTTGTATAACCTTATGAGGAGATCGGGCTTTTTTCCTAACAGATTAACATACCATTCTCTTATTCTTGGACTTTGCAACCATGGTATGTTGGAACTTGGAATTAAGATGTTGAAAATGTTTATTGCTGAAAGTTCTACTATTGATGACTTGACATTTAATATGCTCATTAGGAAGTGTTGTGAAATCAATGACCTGGATAAAGTCATTGATTTGACTCATAACATGGAAGTCTTTAGGGTTTCTCTCGATAAAGACACACAAAAAGCCGTTACTGATGTGCTTGTTAGAAGGATGGTTTCCCAAAATTATTTCGTTTTTATGCATGAAATGCTCAAAAAGGGTTTTATCCCTACATCTAAACAATATTGCACAATGATGAAACGAATGTGTCGAGTGGGGGACATACAGGGGGCATTTAAATTAAAAGATCAGATGGTGGCACTTGGCATAAGTTTGGACGATGCCGCAGAATGTGCTATGGTTCGAGGGCTTGCACTTTGTGGGAAAATTGAAGAGGCAATGTGGATTCTTCAAAGGATGCTTAGGATGAAGAAAATTCCTACTACCAGCACGTTTACAACTTTGATGCACGTCTTCTGTAAAAAAGACAATTTTAAAGAGGCACATAATTTGAAGATCCTTATGGAGCATTATCGTGTGAAGCTTGATATAGTCGCTTACAATGTTCTCATTTCTGCGTGTTGCGCTAATGGTGATGTTATAACTGCACTTGACTTTTACGAAGAGATAAAACAGAAAGGTCTCTTGCCAAACATGACGACCTACAGAGTTCTAGTTTCTGCTATTAGTACAAAGCATTATGTTTCTAGGGGTGAAATAGTTCTCAAGGACTTGAATGATAGAGGATTAGTGTCTGGGTATTTAGATGGGAAGTCGCAAAAATCTTGCAGGGATTTTGTAGTTGCCATTAAAAAACTGAACTCCTTAAAGCCCAATCAAGGAAATTAA

Coding sequence (CDS)

ATGGAGAACAGTATTTACACAATCCTCACTATTGGTCGCTGGGAGTCACTGAATCACATGAACTATAAGTTCGCTTCACTAAGACCAATTCATGGAGTTTTAGCGCTGAAATTCCTCAAGTGGGTCATCAAACAGCCTGGTTTGGAACCCAACCACCTCACTCATATACTCGGTATTACTACTCATGTACTTGTTAAAGCTAGACTGTACGGTTATGCCAAATCAATTCTGAAGCATTTAGCTCAGAAAAATTCTGGGTCCAACTTTCTTTTTGGTGTTCTTATGGATACATACCCTCTTTGCAGCTCAAACCCTGCAGTTTTTGACCTTTTAATTAGAGTTTATTTGCGGCAAGGAATGGTTGGACACGCTGTAAATACTTTTTCTTCCATGCTCATTCGTGGGTTTAAGCCATCTGTTTATACTTGTAACATGATCATGGCTTCCATGGTTAAGAACTGTAGAGCTCACTTGGTTTGGTCTTTTTTTAAGCAAATGCTTACCAGTAGAGTTTGTCCAAACGTTTCCAGTTTTAATATACTGATAAGTGTTTTATGTGTGCAAGGGAAGCTTAAGAAAGCTGTTAACATCTTAACAATGATGGAGAGGAATGGCTATGTTCCTACTATAGTTAGTTATAATACGTTGCTTAGTTGGTGCTGTAAGAAGGGAAGATTTAAATTTGCACTTGTGCTGATTCATCATATGGAGTGCAAGGGAATTCAAGCAGACGTCTGTACATACAATATGTTTATTGATAGTTTGTGCAGAAACAGTAGAAGCGCACAGGGGTATTTAGTTTTGAAGAAAATGAGGAATAAGATGATAACTCCTAATGAAGTTTCTTACAACACCTTGATTAATGGCTTTGTAAAGGAGGGAAAGATAGGGGTTGCTACTCGGGTTTTCAATGAGATGATAGAGCTTAATCTTTCACCAAACCTCATAACTTACAATATTCTAATTAATGGATACTGCATTAATGGCAATTTTGAAGAAGCATTGAGAGTTTTGGATGTGATGGAAGCAAATGACGTGAGGCCTAATGAGGTTACTATTGGAACTCTTTTAAATGGTCTATACAAGAGTGCCAAATTTGACGTAGCTAGAAATATTCTGGAGAGATATTGTATCAATAGAACATCTCTTAATTGTATCTCACATACTGTGATGATTGATGGGCTATGCAGAAATGGGTTGCTTGATGAAGCCTTTCAATTACTGATTGAGATGTGCAAGGATGGTGTTCATCCTGATATCATAACTTTTTCAGTGCTTATAAATGGATTCTGCAAGGTTGGGAATATTAACAAGGCAAAGGAGGTTATGTCGAAAATATATAGAGAAGGATTTGTTCCAAACAATGTTATTTTCTCTACATTAATATATAACTCTTGTAAGGTTGGAAATGTTTATGAAGCGATGAAGTTCTATGCTGCTATGAATTTGAATGGGCAAAATGCAGACAATTTCACATGTAATTCGTTAGTCGCTTCTCTTTGTGAAAATGGAAAACTAGTAGAAGCAGAGGAATTCTTGCATCACATTAGTAGGATTGGTCTTGTTCCTAACTCTGTTACATTTGATTGTATCATAAACGGATATGCAAATGTAGGAGATGGGTCAGGGGCATTTTCAGTGTTTGATAGAATGATTAGTTGTGGTCATCACCCTAGTCCTTTCACCTATGGCAGTCTATTGAAAGTGTTATGCAAGGGACAGAATTTTTGGGAAGCAAGAAAACTATTGAAAAAGCTCCACTGCATTCCGTTGGCTGTTGATACTATATCGTACAACACATTGATTGTTGAGATAAGTAAGTCAGGAAATTTATTGGAAGCAGTTCGCCTATTTGAGGAGATGATTCAGAATAATATTCTACCGGATAGTTATACATACACTTGTATTCTGTCTGGATTAATTAGAGAAGGGAGATTGGTCTGTGCCTTCATATTCTTGGGAAGACTCATGCAAAAAGAAATTCTAACATTGAATTCAATTGTGTACACTTGTTTCATTGATGGCCTTTTCAAGGCTGGCCAGTCAAAGGCTGCATTATATCTTTTTAAGGAAATGGAGGAAAAAGGCCTCTCCTTAGATTTGATTGCTCTTAATTCAATTACAGATGGATATTCAAGGATGGGAAAAGTGTTTAGTGCCAGTTCTCTCATTTCAAAAACGAGAAACAAAAATGTAATACCTAACTTGACTACATTTAATATATTGCTACATGGTTACTCCAGAGGACAGGATATAATGAGTTGCTTTAAGTTGTATAACCTTATGAGGAGATCGGGCTTTTTTCCTAACAGATTAACATACCATTCTCTTATTCTTGGACTTTGCAACCATGGTATGTTGGAACTTGGAATTAAGATGTTGAAAATGTTTATTGCTGAAAGTTCTACTATTGATGACTTGACATTTAATATGCTCATTAGGAAGTGTTGTGAAATCAATGACCTGGATAAAGTCATTGATTTGACTCATAACATGGAAGTCTTTAGGGTTTCTCTCGATAAAGACACACAAAAAGCCGTTACTGATGTGCTTGTTAGAAGGATGGTTTCCCAAAATTATTTCGTTTTTATGCATGAAATGCTCAAAAAGGGTTTTATCCCTACATCTAAACAATATTGCACAATGATGAAACGAATGTGTCGAGTGGGGGACATACAGGGGGCATTTAAATTAAAAGATCAGATGGTGGCACTTGGCATAAGTTTGGACGATGCCGCAGAATGTGCTATGGTTCGAGGGCTTGCACTTTGTGGGAAAATTGAAGAGGCAATGTGGATTCTTCAAAGGATGCTTAGGATGAAGAAAATTCCTACTACCAGCACGTTTACAACTTTGATGCACGTCTTCTGTAAAAAAGACAATTTTAAAGAGGCACATAATTTGAAGATCCTTATGGAGCATTATCGTGTGAAGCTTGATATAGTCGCTTACAATGTTCTCATTTCTGCGTGTTGCGCTAATGGTGATGTTATAACTGCACTTGACTTTTACGAAGAGATAAAACAGAAAGGTCTCTTGCCAAACATGACGACCTACAGAGTTCTAGTTTCTGCTATTAGTACAAAGCATTATGTTTCTAGGGGTGAAATAGTTCTCAAGGACTTGAATGATAGAGGATTAGTGTCTGGGTATTTAGATGGGAAGTCGCAAAAATCTTGCAGGGATTTTGTAGTTGCCATTAAAAAACTGAACTCCTTAAAGCCCAATCAAGGAAATTAA

Protein sequence

MENSIYTILTIGRWESLNHMNYKFASLRPIHGVLALKFLKWVIKQPGLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLDGKSQKSCRDFVVAIKKLNSLKPNQGN
Homology
[Close]
BLAST of CsaV3_3G042310 vs. NCBI nr
Match: XP_011652273.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g55840 [Cucumis sativus])

HSP 1 Score: 528.5 bits (1360), Expect = 5.4e-146
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0 

Query: 816  CCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPT 875
            CCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPT
Sbjct: 697  CCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPT 756

Query: 876  SKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQ 935
            SKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQ
Sbjct: 757  SKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQ 816

Query: 936  RMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANG 995
            RMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANG
Sbjct: 817  RMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANG 876

Query: 996  DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLDGK 1055
            DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLDGK
Sbjct: 877  DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLDGK 936

Query: 1056 SQKSCRDFVVAIKKLNSLKPNQGN 1080
            SQKSCRDFVVAIKKLNSLKPNQGN
Sbjct: 937  SQKSCRDFVVAIKKLNSLKPNQGN 960

[Close]
BLAST of CsaV3_3G042310 vs. NCBI nr
Match: XP_008443499.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g55840 isoform X1 [Cucumis melo] >XP_008443500.1 PREDICTED: pentatricopeptide repeat-containing protein At5g55840 isoform X1 [Cucumis melo] >XP_008443501.1 PREDICTED: pentatricopeptide repeat-containing protein At5g55840 isoform X1 [Cucumis melo] >XP_008443502.1 PREDICTED: pentatricopeptide repeat-containing protein At5g55840 isoform X1 [Cucumis melo] >XP_016899728.1 PREDICTED: pentatricopeptide repeat-containing protein At5g55840 isoform X1 [Cucumis melo])

HSP 1 Score: 501.9 bits (1291), Expect = 5.4e-138
Identity = 247/264 (93.56%), Postives = 259/264 (98.11%), Query Frame = 0 

Query: 816  CCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPT 875
            CCEINDLDKVIDLTHNMEVF VSLDKDTQKAVTDVLV+RMVSQNYFVFMHEMLKKGFIPT
Sbjct: 722  CCEINDLDKVIDLTHNMEVFGVSLDKDTQKAVTDVLVKRMVSQNYFVFMHEMLKKGFIPT 781

Query: 876  SKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQ 935
            S+QY TMMKR+CRVGDIQGAFKLKDQMVALG+SLDD AECAMVRGLALCGKIEEAMWILQ
Sbjct: 782  SRQYSTMMKRLCRVGDIQGAFKLKDQMVALGVSLDDVAECAMVRGLALCGKIEEAMWILQ 841

Query: 936  RMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANG 995
            RMLRMKKIPTTSTFTTLMHV CKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCA+G
Sbjct: 842  RMLRMKKIPTTSTFTTLMHVLCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCASG 901

Query: 996  DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLDGK 1055
            DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEI+LKDLNDRGLVSGY+DGK
Sbjct: 902  DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEILLKDLNDRGLVSGYIDGK 961

Query: 1056 SQKSCRDFVVAIKKLNSLKPNQGN 1080
            SQKSC++F+VA+ KLNSL+PNQGN
Sbjct: 962  SQKSCKNFLVAMNKLNSLRPNQGN 985

[Close]
BLAST of CsaV3_3G042310 vs. NCBI nr
Match: XP_008443504.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g55840 isoform X2 [Cucumis melo])

HSP 1 Score: 501.9 bits (1291), Expect = 5.4e-138
Identity = 247/264 (93.56%), Postives = 259/264 (98.11%), Query Frame = 0 

Query: 816  CCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPT 875
            CCEINDLDKVIDLTHNMEVF VSLDKDTQKAVTDVLV+RMVSQNYFVFMHEMLKKGFIPT
Sbjct: 697  CCEINDLDKVIDLTHNMEVFGVSLDKDTQKAVTDVLVKRMVSQNYFVFMHEMLKKGFIPT 756

Query: 876  SKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQ 935
            S+QY TMMKR+CRVGDIQGAFKLKDQMVALG+SLDD AECAMVRGLALCGKIEEAMWILQ
Sbjct: 757  SRQYSTMMKRLCRVGDIQGAFKLKDQMVALGVSLDDVAECAMVRGLALCGKIEEAMWILQ 816

Query: 936  RMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANG 995
            RMLRMKKIPTTSTFTTLMHV CKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCA+G
Sbjct: 817  RMLRMKKIPTTSTFTTLMHVLCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCASG 876

Query: 996  DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLDGK 1055
            DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEI+LKDLNDRGLVSGY+DGK
Sbjct: 877  DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEILLKDLNDRGLVSGYIDGK 936

Query: 1056 SQKSCRDFVVAIKKLNSLKPNQGN 1080
            SQKSC++F+VA+ KLNSL+PNQGN
Sbjct: 937  SQKSCKNFLVAMNKLNSLRPNQGN 960

[Close]
BLAST of CsaV3_3G042310 vs. NCBI nr
Match: XP_008443505.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g55840 isoform X3 [Cucumis melo])

HSP 1 Score: 501.9 bits (1291), Expect = 5.4e-138
Identity = 247/264 (93.56%), Postives = 259/264 (98.11%), Query Frame = 0 

Query: 816  CCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPT 875
            CCEINDLDKVIDLTHNMEVF VSLDKDTQKAVTDVLV+RMVSQNYFVFMHEMLKKGFIPT
Sbjct: 617  CCEINDLDKVIDLTHNMEVFGVSLDKDTQKAVTDVLVKRMVSQNYFVFMHEMLKKGFIPT 676

Query: 876  SKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQ 935
            S+QY TMMKR+CRVGDIQGAFKLKDQMVALG+SLDD AECAMVRGLALCGKIEEAMWILQ
Sbjct: 677  SRQYSTMMKRLCRVGDIQGAFKLKDQMVALGVSLDDVAECAMVRGLALCGKIEEAMWILQ 736

Query: 936  RMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANG 995
            RMLRMKKIPTTSTFTTLMHV CKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCA+G
Sbjct: 737  RMLRMKKIPTTSTFTTLMHVLCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCASG 796

Query: 996  DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLDGK 1055
            DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEI+LKDLNDRGLVSGY+DGK
Sbjct: 797  DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEILLKDLNDRGLVSGYIDGK 856

Query: 1056 SQKSCRDFVVAIKKLNSLKPNQGN 1080
            SQKSC++F+VA+ KLNSL+PNQGN
Sbjct: 857  SQKSCKNFLVAMNKLNSLRPNQGN 880

[Close]
BLAST of CsaV3_3G042310 vs. NCBI nr
Match: XP_022139533.1 (pentatricopeptide repeat-containing protein At5g55840 isoform X1 [Momordica charantia] >XP_022139534.1 pentatricopeptide repeat-containing protein At5g55840 isoform X1 [Momordica charantia] >XP_022139535.1 pentatricopeptide repeat-containing protein At5g55840 isoform X1 [Momordica charantia])

HSP 1 Score: 405.2 bits (1040), Expect = 6.9e-109
Identity = 982/1080 (90.93%), Postives = 1021/1080 (94.54%), Query Frame = 0 

Query: 1    MENSIYTILTIGRWESLNHMNYKFASLRPIHGVLALKFLKWVIKQPGLEPNHLTHILGIT 60
            ME SIYTILT+GRWESLNHM+YK ASLRPIHGVLALKFLKWVIKQPGLEPNH THILGIT
Sbjct: 1    MEKSIYTILTVGRWESLNHMDYKLASLRPIHGVLALKFLKWVIKQPGLEPNHRTHILGIT 60

Query: 61   THVLVKARLYGYAKSILKHLAQKNSGSNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGM 120
            TH+LV+ARLY YAKSILKHL QKN GSNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGM
Sbjct: 61   THILVRARLYDYAKSILKHLTQKNHGSNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGM 120

Query: 121  VGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFXXXXXXXXXXXXXXXXXX 180
            +G AV+TFSSMLIRGFKPSVYTCNMIMASMVK+CRAHLVW  XXXXXXXXXXXXXXXXXX
Sbjct: 121  IGEAVSTFSSMLIRGFKPSVYTCNMIMASMVKDCRAHLVWXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 601  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 660

Query: 661  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 661  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 720

Query: 721  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 780
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 721  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 780

Query: 781  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCEINDLDKVIDLTHNMEVFRVSLD 840
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 +VFRVSLD
Sbjct: 781  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVFRVSLD 840

Query: 841  KDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKD 900
            + TQKA+ D L+RRM+SQ+ +V + EML+KGF+ T +QYCT+MK MCRVG+IQG F+LKD
Sbjct: 841  EGTQKAIIDGLIRRMISQDSYVIILEMLEKGFVLTLRQYCTIMKGMCRVGNIQGVFELKD 900

Query: 901  QMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKD 960
            +MVALG+S DD AECAMVRGLA CGKI+EAMWILQ MLRM KIPTTSTFTTLMH FCKK 
Sbjct: 901  KMVALGVSSDDVAECAMVRGLAHCGKIDEAMWILQSMLRMHKIPTTSTFTTLMHGFCKKG 960

Query: 961  NFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYR 1020
            NFKEA NLK LMEH  VKLD++AYNVLIS  CANGDVI ALD YEE+KQKGL PNMTTYR
Sbjct: 961  NFKEAQNLKSLMEHCNVKLDVIAYNVLISEYCANGDVIAALDLYEEMKQKGLWPNMTTYR 1020

Query: 1021 VLVSAIST-KHYVSRGEIVLKDLNDRGLVSGYLDGKSQKSCRDFVVAIKKLNSLKPNQGN 1080
            VLV+AIS+ + +VS GE++LKDLN+RGLV GYLD KSQKSCR++VVA++KLNSL+ NQ N
Sbjct: 1021 VLVAAISSIEPHVSIGEVLLKDLNERGLVPGYLDEKSQKSCRNYVVAMEKLNSLRFNQEN 1080

[Close]
BLAST of CsaV3_3G042310 vs. TAIR10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 199.5 bits (506), Expect = 1.0e-50
Identity = 95/162 (58.64%), Postives = 123/162 (75.93%), Query Frame = 0 

Query: 1   MENSIYTILTIGRWESLNHMNYKFASLRPIHGVLALKFLKWVIKQPGLEPNHLTHILGIT 60
           ME SIY ILTI RW SLNHM+Y+ A LR +HG LALKFLKWV+KQPGLE +H+  ++ IT
Sbjct: 59  MEKSIYNILTIDRWGSLNHMDYRQARLRLVHGKLALKFLKWVVKQPGLETDHIVQLVCIT 118

Query: 61  THVLVKARLYGYAKSILKHLAQKNSGSNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGM 120
           TH+LV+AR+Y  A+ ILK L+  +  S+F+FG LM TY LC+SNP+V+D+LIRVYLR+GM
Sbjct: 119 THILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGM 178

Query: 121 VGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSF 163
           +  ++  F  M + GF PSVYTCN I+ S+VK+     VWSF
Sbjct: 179 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220

[Close]
BLAST of CsaV3_3G042310 vs. TAIR10
Match: AT1G19290.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 66.6 bits (161), Expect = 1.1e-10
Identity = 41/151 (27.15%), Postives = 80/151 (52.98%), Query Frame = 0 

Query: 8   ILTIGRWESLNHMNYKFAS------LR--PIHGVLALKFLKWVIKQPGLEPNHLTHILGI 67
           +L +GR+E+L+ ++  F+       LR   ++    L+      KQ    P++  +   +
Sbjct: 52  LLVLGRYEALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMV 111

Query: 68  TTHVLVKARLYGYAKSILKHLAQKNSGSNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQG 127
             H+L +AR Y   KS L  L   N     ++G L+  +   S +P VFD++++VY  +G
Sbjct: 112 --HILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKG 171

Query: 128 MVGHAVNTFSSMLIRGFKPSVYTCNMIMASM 151
           +V +A++ F +M   G  PS+ +CN +++++
Sbjct: 172 LVKNALHVFDNMGNYGRIPSLLSCNSLLSNL 200

[Close]
BLAST of CsaV3_3G042310 vs. TAIR10
Match: AT3G09650.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 59.7 bits (143), Expect = 1.3e-08
Identity = 55/230 (23.91%), Postives = 92/230 (40.00%), Query Frame = 0 

Query: 824  KVIDLTHNMEVFRVSLDKD------TQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSK 883
            +V D    +E  R   D++      T   V    V   +       + EM + G      
Sbjct: 429  RVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRI 488

Query: 884  QYCTMMKRMCRVGDIQGAFKLKDQMVA-LGISLDDAAECAMVRGLALCGKIEEAMWILQR 943
             Y  ++K  C+   I  A  L  +M    GI  D  +   ++ G  L      A+     
Sbjct: 489  TYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNE 548

Query: 944  MLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL-KILMEHYRVKLDIVAYNVLISACCANG 1003
            M      PT  ++TTLM  F      K A+ +   +M   RVK+D++A+N+L+   C  G
Sbjct: 549  MRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLG 608

Query: 1004 DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDR 1046
             +  A      +K+ G  PN+ TY  L + +S         ++ K++ +R
Sbjct: 609  LIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658

[Close]
BLAST of CsaV3_3G042310 vs. TAIR10
Match: AT1G66345.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 1.7e-08
Identity = 40/126 (31.75%), Postives = 60/126 (47.62%), Query Frame = 0 

Query: 35  ALKFLKWVIKQPGLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNFLFGVL 94
           AL F  W      L   H      +T H+LVKARL   A+++++     +   + L   L
Sbjct: 96  ALSFFHWSSHTRNL--RHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDSDLVDSL 155

Query: 95  MDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNC 154
           +DTY + SS P VFDLL++ Y +   +    + F  +   GF  SV T N ++    K+ 
Sbjct: 156 LDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSK 215

Query: 155 RAHLVW 161
              LVW
Sbjct: 216 IDDLVW 219

[Close]
BLAST of CsaV3_3G042310 vs. TAIR10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 1.7e-08
Identity = 37/127 (29.13%), Postives = 64/127 (50.39%), Query Frame = 0 

Query: 34  LALKFLKWVIKQPGLEPNHL--THILGITTHVLVKARLYGYAKSILKHLAQK---NSGSN 93
           L LKFL W        P+         IT H+L K +LY  A+ + + +A K   +  ++
Sbjct: 64  LILKFLNWA------NPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYAS 123

Query: 94  FLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMA 153
            +F  L +TY LC S  +VFDL+++ Y R  ++  A++        GF P V + N ++ 
Sbjct: 124 LVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLD 183

Query: 154 SMVKNCR 156
           + +++ R
Sbjct: 184 ATIRSKR 184

[Close]
BLAST of CsaV3_3G042310 vs. Swiss-Prot
Match: sp|Q9LVQ5|PP432_ARATH (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 199.5 bits (506), Expect = 1.9e-49
Identity = 95/162 (58.64%), Postives = 123/162 (75.93%), Query Frame = 0 

Query: 1   MENSIYTILTIGRWESLNHMNYKFASLRPIHGVLALKFLKWVIKQPGLEPNHLTHILGIT 60
           ME SIY ILTI RW SLNHM+Y+ A LR +HG LALKFLKWV+KQPGLE +H+  ++ IT
Sbjct: 19  MEKSIYNILTIDRWGSLNHMDYRQARLRLVHGKLALKFLKWVVKQPGLETDHIVQLVCIT 78

Query: 61  THVLVKARLYGYAKSILKHLAQKNSGSNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGM 120
           TH+LV+AR+Y  A+ ILK L+  +  S+F+FG LM TY LC+SNP+V+D+LIRVYLR+GM
Sbjct: 79  THILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGM 138

Query: 121 VGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSF 163
           +  ++  F  M + GF PSVYTCN I+ S+VK+     VWSF
Sbjct: 139 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 180

[Close]
BLAST of CsaV3_3G042310 vs. Swiss-Prot
Match: sp|Q9LN69|PPR50_ARATH (Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana OX=3702 GN=At1g19290 PE=3 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-09
Identity = 41/151 (27.15%), Postives = 80/151 (52.98%), Query Frame = 0 

Query: 8   ILTIGRWESLNHMNYKFAS------LR--PIHGVLALKFLKWVIKQPGLEPNHLTHILGI 67
           +L +GR+E+L+ ++  F+       LR   ++    L+      KQ    P++  +   +
Sbjct: 52  LLVLGRYEALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMV 111

Query: 68  TTHVLVKARLYGYAKSILKHLAQKNSGSNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQG 127
             H+L +AR Y   KS L  L   N     ++G L+  +   S +P VFD++++VY  +G
Sbjct: 112 --HILSRARNYQQTKSYLCELVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKG 171

Query: 128 MVGHAVNTFSSMLIRGFKPSVYTCNMIMASM 151
           +V +A++ F +M   G  PS+ +CN +++++
Sbjct: 172 LVKNALHVFDNMGNYGRIPSLLSCNSLLSNL 200

[Close]
BLAST of CsaV3_3G042310 vs. Swiss-Prot
Match: sp|Q9SF38|PP222_ARATH (Pentatricopeptide repeat-containing protein At3g09650, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF152 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.3e-07
Identity = 55/230 (23.91%), Postives = 92/230 (40.00%), Query Frame = 0 

Query: 824  KVIDLTHNMEVFRVSLDKD------TQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSK 883
            +V D    +E  R   D++      T   V    V   +       + EM + G      
Sbjct: 429  RVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRI 488

Query: 884  QYCTMMKRMCRVGDIQGAFKLKDQMVA-LGISLDDAAECAMVRGLALCGKIEEAMWILQR 943
             Y  ++K  C+   I  A  L  +M    GI  D  +   ++ G  L      A+     
Sbjct: 489  TYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNE 548

Query: 944  MLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL-KILMEHYRVKLDIVAYNVLISACCANG 1003
            M      PT  ++TTLM  F      K A+ +   +M   RVK+D++A+N+L+   C  G
Sbjct: 549  MRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLG 608

Query: 1004 DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDR 1046
             +  A      +K+ G  PN+ TY  L + +S         ++ K++ +R
Sbjct: 609  LIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEIKER 658

[Close]
BLAST of CsaV3_3G042310 vs. Swiss-Prot
Match: sp|Q3ECH5|PP107_ARATH (Pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g66345 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.0e-07
Identity = 40/126 (31.75%), Postives = 60/126 (47.62%), Query Frame = 0 

Query: 35  ALKFLKWVIKQPGLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNFLFGVL 94
           AL F  W      L   H      +T H+LVKARL   A+++++     +   + L   L
Sbjct: 96  ALSFFHWSSHTRNL--RHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDSDLVDSL 155

Query: 95  MDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNC 154
           +DTY + SS P VFDLL++ Y +   +    + F  +   GF  SV T N ++    K+ 
Sbjct: 156 LDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSK 215

Query: 155 RAHLVW 161
              LVW
Sbjct: 216 IDDLVW 219

[Close]
BLAST of CsaV3_3G042310 vs. Swiss-Prot
Match: sp|Q9FIX3|PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.0e-07
Identity = 37/127 (29.13%), Postives = 64/127 (50.39%), Query Frame = 0 

Query: 34  LALKFLKWVIKQPGLEPNHL--THILGITTHVLVKARLYGYAKSILKHLAQK---NSGSN 93
           L LKFL W        P+         IT H+L K +LY  A+ + + +A K   +  ++
Sbjct: 64  LILKFLNWA------NPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYAS 123

Query: 94  FLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMA 153
            +F  L +TY LC S  +VFDL+++ Y R  ++  A++        GF P V + N ++ 
Sbjct: 124 LVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLD 183

Query: 154 SMVKNCR 156
           + +++ R
Sbjct: 184 ATIRSKR 184

[Close]
BLAST of CsaV3_3G042310 vs. TrEMBL
Match: tr|A0A1S4DUT4|A0A1S4DUT4_CUCME (pentatricopeptide repeat-containing protein At5g55840 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487075 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 3.6e-138
Identity = 247/264 (93.56%), Postives = 259/264 (98.11%), Query Frame = 0 

Query: 816  CCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPT 875
            CCEINDLDKVIDLTHNMEVF VSLDKDTQKAVTDVLV+RMVSQNYFVFMHEMLKKGFIPT
Sbjct: 722  CCEINDLDKVIDLTHNMEVFGVSLDKDTQKAVTDVLVKRMVSQNYFVFMHEMLKKGFIPT 781

Query: 876  SKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQ 935
            S+QY TMMKR+CRVGDIQGAFKLKDQMVALG+SLDD AECAMVRGLALCGKIEEAMWILQ
Sbjct: 782  SRQYSTMMKRLCRVGDIQGAFKLKDQMVALGVSLDDVAECAMVRGLALCGKIEEAMWILQ 841

Query: 936  RMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANG 995
            RMLRMKKIPTTSTFTTLMHV CKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCA+G
Sbjct: 842  RMLRMKKIPTTSTFTTLMHVLCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCASG 901

Query: 996  DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLDGK 1055
            DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEI+LKDLNDRGLVSGY+DGK
Sbjct: 902  DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEILLKDLNDRGLVSGYIDGK 961

Query: 1056 SQKSCRDFVVAIKKLNSLKPNQGN 1080
            SQKSC++F+VA+ KLNSL+PNQGN
Sbjct: 962  SQKSCKNFLVAMNKLNSLRPNQGN 985

[Close]
BLAST of CsaV3_3G042310 vs. TrEMBL
Match: tr|A0A1S3B866|A0A1S3B866_CUCME (pentatricopeptide repeat-containing protein At5g55840 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487075 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 3.6e-138
Identity = 247/264 (93.56%), Postives = 259/264 (98.11%), Query Frame = 0 

Query: 816  CCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPT 875
            CCEINDLDKVIDLTHNMEVF VSLDKDTQKAVTDVLV+RMVSQNYFVFMHEMLKKGFIPT
Sbjct: 697  CCEINDLDKVIDLTHNMEVFGVSLDKDTQKAVTDVLVKRMVSQNYFVFMHEMLKKGFIPT 756

Query: 876  SKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQ 935
            S+QY TMMKR+CRVGDIQGAFKLKDQMVALG+SLDD AECAMVRGLALCGKIEEAMWILQ
Sbjct: 757  SRQYSTMMKRLCRVGDIQGAFKLKDQMVALGVSLDDVAECAMVRGLALCGKIEEAMWILQ 816

Query: 936  RMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANG 995
            RMLRMKKIPTTSTFTTLMHV CKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCA+G
Sbjct: 817  RMLRMKKIPTTSTFTTLMHVLCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCASG 876

Query: 996  DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLDGK 1055
            DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEI+LKDLNDRGLVSGY+DGK
Sbjct: 877  DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEILLKDLNDRGLVSGYIDGK 936

Query: 1056 SQKSCRDFVVAIKKLNSLKPNQGN 1080
            SQKSC++F+VA+ KLNSL+PNQGN
Sbjct: 937  SQKSCKNFLVAMNKLNSLRPNQGN 960

[Close]
BLAST of CsaV3_3G042310 vs. TrEMBL
Match: tr|A0A1S3B893|A0A1S3B893_CUCME (pentatricopeptide repeat-containing protein At5g55840 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103487075 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 3.6e-138
Identity = 247/264 (93.56%), Postives = 259/264 (98.11%), Query Frame = 0 

Query: 816  CCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPT 875
            CCEINDLDKVIDLTHNMEVF VSLDKDTQKAVTDVLV+RMVSQNYFVFMHEMLKKGFIPT
Sbjct: 617  CCEINDLDKVIDLTHNMEVFGVSLDKDTQKAVTDVLVKRMVSQNYFVFMHEMLKKGFIPT 676

Query: 876  SKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQ 935
            S+QY TMMKR+CRVGDIQGAFKLKDQMVALG+SLDD AECAMVRGLALCGKIEEAMWILQ
Sbjct: 677  SRQYSTMMKRLCRVGDIQGAFKLKDQMVALGVSLDDVAECAMVRGLALCGKIEEAMWILQ 736

Query: 936  RMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANG 995
            RMLRMKKIPTTSTFTTLMHV CKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCA+G
Sbjct: 737  RMLRMKKIPTTSTFTTLMHVLCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCASG 796

Query: 996  DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLDGK 1055
            DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEI+LKDLNDRGLVSGY+DGK
Sbjct: 797  DVITALDFYEEIKQKGLLPNMTTYRVLVSAISTKHYVSRGEILLKDLNDRGLVSGYIDGK 856

Query: 1056 SQKSCRDFVVAIKKLNSLKPNQGN 1080
            SQKSC++F+VA+ KLNSL+PNQGN
Sbjct: 857  SQKSCKNFLVAMNKLNSLRPNQGN 880

[Close]
BLAST of CsaV3_3G042310 vs. TrEMBL
Match: tr|A0A2P4MZF8|A0A2P4MZF8_QUESU (Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_34013 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-61
Identity = 120/162 (74.07%), Postives = 137/162 (84.57%), Query Frame = 0 

Query: 1   MENSIYTILTIGRWESLNHMNYKFASLRPIHGVLALKFLKWVIKQPGLEPNHLTHILGIT 60
           ME SIYT+LTI RWESLNHM Y+ ASLRP+HG LALKFL WVIKQPGLE NHLTHIL IT
Sbjct: 32  MEKSIYTLLTIDRWESLNHMEYRLASLRPVHGRLALKFLNWVIKQPGLELNHLTHILCIT 91

Query: 61  THVLVKARLYGYAKSILKHLAQKNSGSNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGM 120
           THVLV+AR+Y  AKSIL+HL+Q   G+N +FG +MDTYPLC+SNPAVFDLLIRVY+R+ M
Sbjct: 92  THVLVRARMYDSAKSILRHLSQMGIGTNSVFGAVMDTYPLCNSNPAVFDLLIRVYIRERM 151

Query: 121 VGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSF 163
           V  AV TF  M  RGF+PSV+TCNMI+ASMVK+ RA LVWSF
Sbjct: 152 VRDAVETFYLMGFRGFRPSVFTCNMILASMVKDRRAGLVWSF 193

[Close]
BLAST of CsaV3_3G042310 vs. TrEMBL
Match: tr|A0A2N9HIV6|A0A2N9HIV6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39512 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.3e-60
Identity = 117/158 (74.05%), Postives = 136/158 (86.08%), Query Frame = 0 

Query: 1   MENSIYTILTIGRWESLNHMNYKFASLRPIHGVLALKFLKWVIKQPGLEPNHLTHILGIT 60
           +E SIYTILTI RWESLNHM Y+ ASLRP+HG LALKFL WVIKQPGLE NHLTHIL IT
Sbjct: 32  LEKSIYTILTIDRWESLNHMEYRLASLRPVHGRLALKFLNWVIKQPGLEVNHLTHILCIT 91

Query: 61  THVLVKARLYGYAKSILKHLAQKNSGSNFLFGVLMDTYPLCSSNPAVFDLLIRVYLRQGM 120
           THVLV+AR+Y +AKSIL+HL++   G+N +FG LMDTY LC+SNPAVFDLLIRVY+R+GM
Sbjct: 92  THVLVRARMYDFAKSILRHLSELGIGTNSVFGALMDTYRLCNSNPAVFDLLIRVYIREGM 151

Query: 121 VGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHL 159
           VG AV TF+ M  RGF+PSV+TCNMI+ASMVK+ RA L
Sbjct: 152 VGDAVETFNLMGFRGFRPSVFTCNMILASMVKDRRAGL 189

The following BLAST results are available for this feature:
BLAST of CsaV3_3G042310 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011652273.15.4e-146100.00PREDICTED: pentatricopeptide repeat-containing protein At5g55840 [Cucumis sativu... [more]
XP_008443499.15.4e-13893.56PREDICTED: pentatricopeptide repeat-containing protein At5g55840 isoform X1 [Cuc... [more]
XP_008443504.15.4e-13893.56PREDICTED: pentatricopeptide repeat-containing protein At5g55840 isoform X2 [Cuc... [more]
XP_008443505.15.4e-13893.56PREDICTED: pentatricopeptide repeat-containing protein At5g55840 isoform X3 [Cuc... [more]
XP_022139533.16.9e-10990.93pentatricopeptide repeat-containing protein At5g55840 isoform X1 [Momordica char... [more]
BLAST of CsaV3_3G042310 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G55840.11.0e-5058.64Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G19290.11.1e-1027.15Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G09650.11.3e-0823.91Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G66345.11.7e-0831.75Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G39710.11.7e-0829.13Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CsaV3_3G042310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LVQ5|PP432_ARATH1.9e-4958.64Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX... [more]
sp|Q9LN69|PPR50_ARATH1.9e-0927.15Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis th... [more]
sp|Q9SF38|PP222_ARATH2.3e-0723.91Pentatricopeptide repeat-containing protein At3g09650, chloroplastic OS=Arabidop... [more]
sp|Q3ECH5|PP107_ARATH3.0e-0731.75Pentatricopeptide repeat-containing protein At1g66345, mitochondrial OS=Arabidop... [more]
sp|Q9FIX3|PP407_ARATH3.0e-0729.13Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... [more]
BLAST of CsaV3_3G042310 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DUT4|A0A1S4DUT4_CUCME3.6e-13893.56pentatricopeptide repeat-containing protein At5g55840 isoform X1 OS=Cucumis melo... [more]
tr|A0A1S3B866|A0A1S3B866_CUCME3.6e-13893.56pentatricopeptide repeat-containing protein At5g55840 isoform X2 OS=Cucumis melo... [more]
tr|A0A1S3B893|A0A1S3B893_CUCME3.6e-13893.56pentatricopeptide repeat-containing protein At5g55840 isoform X3 OS=Cucumis melo... [more]
tr|A0A2P4MZF8|A0A2P4MZF8_QUESU1.6e-6174.07Pentatricopeptide repeat-containing protein OS=Quercus suber OX=58331 GN=CFP56_3... [more]
tr|A0A2N9HIV6|A0A2N9HIV6_FAGSY2.3e-6074.05Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39512 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G042310.1CsaV3_3G042310.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 861..941
e-value: 1.6E-11
score: 46.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 31..154
e-value: 2.1E-11
score: 45.5
coord: 155..263
e-value: 7.1E-28
score: 99.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 264..380
e-value: 8.0E-34
score: 119.4
coord: 676..860
e-value: 1.9E-33
score: 118.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 942..1046
e-value: 1.1E-16
score: 62.9
coord: 381..445
e-value: 1.2E-18
score: 69.3
coord: 589..661
e-value: 2.5E-12
score: 48.6
coord: 446..516
e-value: 5.5E-13
score: 50.8
coord: 517..588
e-value: 3.1E-14
score: 54.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 980..1025
e-value: 9.9E-12
score: 44.8
coord: 665..712
e-value: 7.3E-8
score: 32.4
coord: 278..326
e-value: 1.7E-17
score: 63.2
coord: 594..641
e-value: 3.5E-13
score: 49.4
coord: 734..783
e-value: 3.9E-11
score: 42.8
coord: 138..186
e-value: 6.9E-9
score: 35.6
coord: 208..257
e-value: 4.4E-14
score: 52.3
coord: 523..572
e-value: 3.4E-12
score: 46.3
coord: 387..432
e-value: 2.2E-15
score: 56.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 108..136
e-value: 0.36
score: 11.1
coord: 808..834
e-value: 0.66
score: 10.3
coord: 916..940
e-value: 0.018
score: 15.2
coord: 456..483
e-value: 1.1
score: 9.6
coord: 879..907
e-value: 0.11
score: 12.7
coord: 947..973
e-value: 0.026
score: 14.7
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 485..514
e-value: 1.6E-5
score: 24.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 177..209
e-value: 3.1E-6
score: 25.0
coord: 526..559
e-value: 7.0E-7
score: 27.0
coord: 596..630
e-value: 1.2E-5
score: 23.1
coord: 108..140
e-value: 3.6E-4
score: 18.5
coord: 667..700
e-value: 2.6E-8
score: 31.5
coord: 281..314
e-value: 7.8E-9
score: 33.2
coord: 879..910
e-value: 5.7E-5
score: 21.0
coord: 982..1015
e-value: 2.7E-7
score: 28.3
coord: 421..454
e-value: 1.4E-7
score: 29.2
coord: 491..524
e-value: 2.6E-4
score: 19.0
coord: 738..770
e-value: 6.9E-7
score: 27.1
coord: 246..279
e-value: 4.2E-4
score: 18.3
coord: 316..350
e-value: 1.5E-10
score: 38.5
coord: 211..244
e-value: 3.5E-7
score: 28.0
coord: 387..420
e-value: 1.5E-8
score: 32.3
coord: 141..175
e-value: 1.2E-5
score: 23.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 454..488
score: 7.87
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 910..944
score: 8.769
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 875..909
score: 8.89
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 700..734
score: 8.418
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 489..523
score: 11.115
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 139..173
score: 8.484
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 805..839
score: 8.353
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 384..418
score: 12.233
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 735..769
score: 10.786
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 419..453
score: 12.014
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 314..348
score: 13.395
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1015..1049
score: 6.741
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 209..243
score: 10.633
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 104..138
score: 9.997
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 559..593
score: 7.596
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 629..663
score: 8.046
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 174..208
score: 11.52
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 244..278
score: 10.008
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 665..699
score: 10.994
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 524..558
score: 10.972
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 279..313
score: 12.43
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 945..979
score: 8.199
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 594..628
score: 11.86
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 980..1014
score: 12.573
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 840..874
score: 5.492
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 770..804
score: 7.772
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 349..383
score: 6.182
NoneNo IPR availablePANTHERPTHR24015:SF688SUBFAMILY NOT NAMEDcoord: 558..1046
NoneNo IPR availablePANTHERPTHR24015:SF688SUBFAMILY NOT NAMEDcoord: 346..554
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 558..1046
NoneNo IPR availablePANTHERPTHR24015:SF688SUBFAMILY NOT NAMEDcoord: 2..341
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 346..554
coord: 2..341

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G042310CSPI03G39810Wild cucumber (PI 183967)cpicucB145
CsaV3_3G042310Cucsa.339590Cucumber (Gy14) v1cgycucB523
CsaV3_3G042310CsGy3G037330Cucumber (Gy14) v2cgybcucB117
CsaV3_3G042310MELO3C009949Melon (DHL92) v3.5.1cucmeB218
CsaV3_3G042310MELO3C009949.2Melon (DHL92) v3.6.1cucmedB211
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G042310Cucumber (Chinese Long) v3cuccucB018
CsaV3_3G042310Cucumber (Chinese Long) v3cuccucB025
CsaV3_3G042310Cucumber (Chinese Long) v3cuccucB132
CsaV3_3G042310Silver-seed gourdcarcucB0290
CsaV3_3G042310Silver-seed gourdcarcucB0400
CsaV3_3G042310Silver-seed gourdcarcucB0468
CsaV3_3G042310Silver-seed gourdcarcucB0722
CsaV3_3G042310Cucumber (Gy14) v2cgybcucB025
CsaV3_3G042310Cucumber (Gy14) v2cgybcucB028
CsaV3_3G042310Cucumber (Gy14) v2cgybcucB222
CsaV3_3G042310Cucumber (Gy14) v1cgycucB111
CsaV3_3G042310Cucumber (Gy14) v1cgycucB318
CsaV3_3G042310Cucumber (Gy14) v1cgycucB439
CsaV3_3G042310Cucurbita maxima (Rimu)cmacucB0141
CsaV3_3G042310Cucurbita maxima (Rimu)cmacucB0279
CsaV3_3G042310Cucurbita maxima (Rimu)cmacucB0330
CsaV3_3G042310Cucurbita maxima (Rimu)cmacucB0839
CsaV3_3G042310Cucurbita moschata (Rifu)cmocucB0130
CsaV3_3G042310Cucurbita moschata (Rifu)cmocucB0270
CsaV3_3G042310Cucurbita moschata (Rifu)cmocucB0325
CsaV3_3G042310Cucurbita moschata (Rifu)cmocucB0824
CsaV3_3G042310Cucurbita pepo (Zucchini)cpecucB0203
CsaV3_3G042310Cucurbita pepo (Zucchini)cpecucB0493
CsaV3_3G042310Cucurbita pepo (Zucchini)cpecucB0747
CsaV3_3G042310Cucurbita pepo (Zucchini)cpecucB0840
CsaV3_3G042310Wild cucumber (PI 183967)cpicucB029
CsaV3_3G042310Wild cucumber (PI 183967)cpicucB034
CsaV3_3G042310Wild cucumber (PI 183967)cpicucB274
CsaV3_3G042310Bottle gourd (USVL1VR-Ls)cuclsiB191
CsaV3_3G042310Bottle gourd (USVL1VR-Ls)cuclsiB203
CsaV3_3G042310Bottle gourd (USVL1VR-Ls)cuclsiB212
CsaV3_3G042310Bottle gourd (USVL1VR-Ls)cuclsiB246
CsaV3_3G042310Melon (DHL92) v3.5.1cucmeB164
CsaV3_3G042310Melon (DHL92) v3.5.1cucmeB172
CsaV3_3G042310Melon (DHL92) v3.5.1cucmeB184
CsaV3_3G042310Melon (DHL92) v3.5.1cucmeB195
CsaV3_3G042310Melon (DHL92) v3.6.1cucmedB156
CsaV3_3G042310Melon (DHL92) v3.6.1cucmedB186
CsaV3_3G042310Melon (DHL92) v3.6.1cucmedB162
CsaV3_3G042310Melon (DHL92) v3.6.1cucmedB175
CsaV3_3G042310Watermelon (Charleston Gray)cucwcgB183
CsaV3_3G042310Watermelon (Charleston Gray)cucwcgB199
CsaV3_3G042310Watermelon (Charleston Gray)cucwcgB233
CsaV3_3G042310Watermelon (Charleston Gray)cucwcgB251
CsaV3_3G042310Watermelon (97103) v1cucwmB208
CsaV3_3G042310Watermelon (97103) v1cucwmB248
CsaV3_3G042310Watermelon (97103) v1cucwmB287
CsaV3_3G042310Watermelon (97103) v2cucwmbB187
CsaV3_3G042310Watermelon (97103) v2cucwmbB256
CsaV3_3G042310Wax gourdcucwgoB241
CsaV3_3G042310Wax gourdcucwgoB270