CsaV3_3G041730 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G041730
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 34032001 .. 34033701 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAGTTTTCTTTCAGTTTGCTTGGCCCCTACTCGGCAACTGCCGAAGCTGCCTCATCAGAGCTGTCGTCAGTTCAATCTTTTCACTCCTCAGCCTGATGGAAACTCCTCTTCAATTCCCTCCAGGAAACTTCCAAGCTCGTAAGCATCTAATTTTACTCTTTTCTTCCAGTTCCCACTGAGTTGATGGAACACCATTTTTCTGGGGTTCTTGTTTTCAATTATATTGTCGATCTTATCTTTCTTCTCACTTCCTTCAATTTATTGGACTGTGGGCAACTAGATGGAGATTCATTTCTCCGCAACTTAGTGTAGCTCATGGAGCCAGCCTTCAACGTCATGGCTGAAAAATGCATTGATGTTGAGTTCGCTAGAATACAGGTCGGTTAGATTGCAATAATATCTAAGTTCAGGTTATATATTATTTTAGTTTAGATTACAATAACATGGTATAATAAGAAAATAGTTAATGTAAAATAGTAAAAACAGTAACAGTATTTACATCCAAACAACTCCTTGTTATCTATCTTTCTTCTTATATTAACAAAAACATCAAATATAATCATTGATCTGAGGTTATTCGACTTCAAAAGTAGAGATGTTTTAATATTTTACTCCATAGTCAAATTTATAAACATGGTTGGTTGTCATAGAAGTAAACAAAATCTATATTCACGTAACAAAAGGTGAGCAATCTCCCACCTCACCTCAAGGTTAGAGGTTAAAATCTACTTCTAATTAATTTAATATTACAAAGATACAAATTCTAAAGAAATGGAATCATGTTAGATGGTGGTTTATGATATTCATATTCTCAATGACTATATTTTTTGCACTTGAAGAGTTGATACCAGGGATTATCTATTCTTGGAGTGTGCCTTAAATGTGAAGGTATTCCCATTTGATATCGGGATTTACCATTTTAGAAAAAGAAATAATATGAGGTAGAAGGTTTAGAGATTTATTTGGTGTGCAATTCTTTATCTTGTTTAGTGTGAGCACAATGAGTATATCCATGGTTACTTTGTATTCTTCATAGGTAATTAGTCTATATATATATACGATATTAGGTTTCTAGATATATTCTAAGTGGATGATTGTTTCTTTTATAAAAAATCAATGAGACTTTTTTTCTTTTAAGTGTTTGTTTCTTTTTATTATATCTTTATTTATTCGTAATGTTTTGTCTGTGTCTTGACCTCGGACTGTGAGATTTTTTTTCCTAGACAATCGAAACTAGAATTTAAAGGTATTTTTTCTTTTAAGATTTTGGTTGTTTCAAGTTTAGATTTTAAATTGATATAATTTTTTTTATTTTGTTTATATGAAGATATAAATTAATAAATTAACAGGAGTTAGAGTATAATTAATACTCGGTTGGAACAATATTCCAATTTCGCAAGATTGTATTTAGTTTATTGGGCCAAAATGGAATGATAAAAAGGCGATGGGCCCATTTGGTTATCAAAATTCTACGCCGTCGCATCCATTTTTCTTGCGCTACTGAAGGGGAGAGAGAAAGGGAGAAAAATGGGAGTTCTTCTATCAAGAATCGGAGCTCTTCTTTCTAATTGGTTCGGCCCCCCCACGGCCACCGCCGAAGCTGCCTCATCCGACTCATCCTCGGTTCACTCTTTTCACTCCTCAGCCAGATGGCAACTCCACTTCAATTCCCTTCAGGAAACTCCCAAGCTTGTAA

mRNA sequence

ATGGAAAGTTTTCTTTCAGTTTGCTTGGCCCCTACTCGGCAACTGCCGAAGCTGCCTCATCAGAGCTGTCGTCAGTTCAATCTTTTCACTCCTCAGCCTGATGGAAACTCCTCTTCAATTCCCTCCAGGAAACTTCCAAGCTCGGGAGAGAGAAAGGGAGAAAAATGGGAGTTCTTCTATCAAGAATCGGAGCTCTTCTTTCTAATTGGTTCGGCCCCCCCACGGCCACCGCCGAAGCTGCCTCATCCGACTCATCCTCGGTTCACTCTTTTCACTCCTCAGCCAGATGGCAACTCCACTTCAATTCCCTTCAGGAAACTCCCAAGCTTGTAA

Coding sequence (CDS)

ATGGAAAGTTTTCTTTCAGTTTGCTTGGCCCCTACTCGGCAACTGCCGAAGCTGCCTCATCAGAGCTGTCGTCAGTTCAATCTTTTCACTCCTCAGCCTGATGGAAACTCCTCTTCAATTCCCTCCAGGAAACTTCCAAGCTCGGGAGAGAGAAAGGGAGAAAAATGGGAGTTCTTCTATCAAGAATCGGAGCTCTTCTTTCTAATTGGTTCGGCCCCCCCACGGCCACCGCCGAAGCTGCCTCATCCGACTCATCCTCGGTTCACTCTTTTCACTCCTCAGCCAGATGGCAACTCCACTTCAATTCCCTTCAGGAAACTCCCAAGCTTGTAA

Protein sequence

MESFLSVCLAPTRQLPKLPHQSCRQFNLFTPQPDGNSSSIPSRKLPSSGERKGEKWEFFYQESELFFLIGSAPPRPPPKLPHPTHPRFTLFTPQPDGNSTSIPFRKLPSL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G041730.1CsaV3_3G041730.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..110

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G041730Wax gourdcucwgoB225
CsaV3_3G041730Wax gourdcucwgoB270
CsaV3_3G041730Cucumber (Chinese Long) v3cuccucB018
CsaV3_3G041730Cucumber (Chinese Long) v3cuccucB126
CsaV3_3G041730Cucumber (Chinese Long) v3cuccucB130
CsaV3_3G041730Silver-seed gourdcarcucB0241
CsaV3_3G041730Silver-seed gourdcarcucB0291
CsaV3_3G041730Silver-seed gourdcarcucB0468
CsaV3_3G041730Cucumber (Gy14) v2cgybcucB025
CsaV3_3G041730Cucumber (Gy14) v2cgybcucB117
CsaV3_3G041730Cucumber (Gy14) v2cgybcucB218
CsaV3_3G041730Cucumber (Gy14) v2cgybcucB224
CsaV3_3G041730Cucumber (Gy14) v1cgycucB111
CsaV3_3G041730Cucumber (Gy14) v1cgycucB242
CsaV3_3G041730Cucumber (Gy14) v1cgycucB438
CsaV3_3G041730Cucumber (Gy14) v1cgycucB523
CsaV3_3G041730Cucurbita maxima (Rimu)cmacucB0142
CsaV3_3G041730Cucurbita maxima (Rimu)cmacucB0279
CsaV3_3G041730Cucurbita maxima (Rimu)cmacucB0333
CsaV3_3G041730Cucurbita moschata (Rifu)cmocucB0127
CsaV3_3G041730Cucurbita moschata (Rifu)cmocucB0270
CsaV3_3G041730Cucurbita pepo (Zucchini)cpecucB0202
CsaV3_3G041730Wild cucumber (PI 183967)cpicucB275
CsaV3_3G041730Cucurbita pepo (Zucchini)cpecucB0747
CsaV3_3G041730Cucurbita pepo (Zucchini)cpecucB0838
CsaV3_3G041730Wild cucumber (PI 183967)cpicucB029
CsaV3_3G041730Wild cucumber (PI 183967)cpicucB145
CsaV3_3G041730Wild cucumber (PI 183967)cpicucB270
CsaV3_3G041730Bottle gourd (USVL1VR-Ls)cuclsiB192
CsaV3_3G041730Bottle gourd (USVL1VR-Ls)cuclsiB203
CsaV3_3G041730Melon (DHL92) v3.5.1cucmeB167
CsaV3_3G041730Melon (DHL92) v3.5.1cucmeB173
CsaV3_3G041730Melon (DHL92) v3.5.1cucmeB184
CsaV3_3G041730Melon (DHL92) v3.5.1cucmeB218
CsaV3_3G041730Melon (DHL92) v3.6.1cucmedB157
CsaV3_3G041730Melon (DHL92) v3.6.1cucmedB163
CsaV3_3G041730Melon (DHL92) v3.6.1cucmedB175
CsaV3_3G041730Melon (DHL92) v3.6.1cucmedB211
CsaV3_3G041730Watermelon (Charleston Gray)cucwcgB183
CsaV3_3G041730Watermelon (Charleston Gray)cucwcgB199
CsaV3_3G041730Watermelon (Charleston Gray)cucwcgB235
CsaV3_3G041730Watermelon (97103) v1cucwmB195
CsaV3_3G041730Watermelon (97103) v1cucwmB208
CsaV3_3G041730Watermelon (97103) v1cucwmB250
CsaV3_3G041730Watermelon (97103) v2cucwmbB187
CsaV3_3G041730Watermelon (97103) v2cucwmbB256