CsaV3_3G040650 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCAATATCTATCAAATTCTTCGGATTCATAACGATTTCTCTTGGAAGGGTAGAAGAGTTTTTATTTGTTAAAAACCATAAACCCTTCCAATGGTGTCCGATATCGGCAAATGGAGCCAGCCGTATCTAACAAATGCTTGAAGACAAGTGAAGCCGAAGAAGAACAGTTAAACTGTGGTCTCCTTCACTGCGCTCACCTCGTACTTCCATGGCTGACCTCTCTCGAGCTCGCAACCATATCTCTCTCCTGCAAATCCCTCAATGCCACTTCCAAATCTATCACTCTCCGCCGGACTCTCGACGCTTCCAGATCCCTCGAGAAAATTCCCATCCCATTCCATAATTCAATCGACGATCGCCTCTACGCCTTCTTTATCTACACCCCCACGGTTATTATCTCCAATCAGCATTTCCAGCGCCAATGCTGGGGCTCAATTTCAGATCCCCAGTCGGTCCATGACGAGAGCGAGTCGATTAATTTGGTTGATAATTGGGTTGATGGTGTATTTGGATGCGATTGTGAAAATTGCGGGGATTTTGAGTTACAATGCCCCTGTTTGAGCTTTGATGGGTTGGAGGATGTTGCTAGCGAGTGTGGACCGCGATGTTCTTGTGGGCTGGAGTGTGAAAATCGGTTGACCCAGAGAGGAATTTCTGTTCGATTGAAGATTTTGAGAGATGAGAAGAAAGGATGGGGTTTGTATGCGGACGAGTTGATTCAAGAAGGGGCGTTCATTTGTGAGTATGCAGGTACTCTCTTTGATGTTCATGATGTGGAATTTGTTACGATTTTGCATAGTTGTTCTGCTCACTCTGCAGTAATCTGGTTGAGTGGCTGAATTTACTTTGAATATTACAGTTAAAGATTGTCTGCTTTCAATTCCAATTAGCCCAAGTAAGGATTAAATTATCTTATACCAATACAAGAGCAAGACATCATAGAAATGTTCATTTACTTCGCATATATTGAAGGAGTGAATTTCATTTTGTAAGACTTTTCTTATGTTCCATTGGTTTTTTAGTGAACCCGTGTTCTTGGTCCAACTATGGAATGAATTAAATAAATCTCTCTTAAGCTAATAAAAGAATAAGGTCTCATTGTTTGAATCTTCAACTAATGTTTTAAGAAGACTACTCATTTACTTTGTATGCACATGGAATAAGTTCATTTCAATTCTTAAAATATATTTGAGTTCTTACTTTGTCAAGGCCCAGAATAGTATGTATATTGAGTGTTTGCAAACTCCAGTGATTCTGAAATAAATGGAGTTTCAGTAGAGATTGGTAAAAAAAAACATATAAAATTTTTGGAAAAGCATGTGTGATGCAGATACTTCTCTATGAGAACGTTTTGGTTTTCAAAATTTTCGATTTGTTTATGAGGGTAATCAATCAAGGGCAAACAAATAGATGAAAACTATTTTTTTCTGGGAAACATATGTAGATGATGTTTGTTGGTCTGTATATCATATTTGTGGTCCATGTAAATGAGCATGTGTTTATACGAAGGATATTTTATGACAGAAATAAGTATAGCAGATGTATAACGTCTTAGAGGCTTAGAGTACACTCCATGCAATTGAGAAATTATGTTCTTTAATTGAAATGAGAATTATGAGAATACTACATACTGCTCCGTGGGCATCTCATGCTGCCAATTCTATTGAAAGAACATTTAGGGAAACTGCTCATTAACTTCCATTGATGCAACTGAATTTTGCATACGAAAGGTGAACTTTTGACCACTGAAGAAGCAAGAAGGCGGCAGAAAATATATGATGCACGTGCCAAAGGTGGGCGGTTTGCTTCATCTCTTCTCGTTGTGAGAGAGCATCTTCCATCTGGAAATGCATGTTTGCGAATGAACATCGACGCGACCTGGATTGGGAATGTCGCACGATTCATAAATCACTCTTGTGACGGAGGTAATCTAGTAACAAGACTGGTGAGAGGTACAGGTGTTATGTTGCCTCGCCTTTGTTTCTATGCTTCTCAAAGCATATCAAAAGAGGAAGAGCTTACCTTTAGTTATGGTGATATCAGATTAAAGCATGAAGGCTTGAAATGCTTCTGTGGTAGTTCTTGCTGTTTGGGAACTTTGCCTTCAGAAAATACATAACTTCATGAGTGAGAATAGAATGGGAATGGGAAGTAAAGGAATTGAGAGTAATTTGTATGGTTTCTCCTCCAATTTTGTACTTCATTTTAGATTGGATGGATGTGAAAAAGAACTAATTTGTTTATTTGACTAATTATGCCTGCTAATTATCGTCAATTCAAACGACCAGTCATAGACATTAATTACCATCCAAAATGCTGATGGCTCGATTCCTACCCTCACAATCCTTGGCTCAAGAATTATGCTCAGTAACTCCCATGCTTTTAAGTAGTGGTATAGCCGAGTTGGTCGAAATCGACTATCTCTTCTGTTTAGTTGTGTACTTTAGAAAACTGAATCTGTTTGATTGGCAATGTTATTTCAAAAAACTTAATCTATCTGATTGACAATCATGCTTCAAAGCGATTGGATTAGCTTGTTTTATCAGTTTTTATCTTATTTTCCTTCCTATTTCACACTGTGCCCGGTTGCATCCCTACTGTTAAAGTTGAAAATTTTGATTCCATCGGTGTTCTTTTACTCCTACATTGATTCTATCTTATAGTTTAGCTGGGAAACTTCTGGAAAATCACTTTGATGTTATTCTTCCTCAATCCTGAACAAAGGTAAAAAGGGTCTTAATCAGCAAAGATAGCTGGCAGCTGGCTGTTTTCCTCGTCTTCCTCCTCGTCGATTGGGCGGTGGGGGAAGTGAAGAGGCTCTAAGTGATGGGAAGACGGGGCAGTCTCGGTAGGAAGATCATAATTGGAAGCAAAACTACTCAAGTTGATTGCATTAGGAGCGGAGGTAGAGGCGGAGATGGAGGAGTTGTTAGAGTAAGCTGGCTGCAGAACTCCTACTTGGGATGACTGTGAGTTTTGAACTGCAGCTGCAAATGCCAACCTGCTGCTTATCAATTGAGCTTGAACCGCCGCAAGCTCCGCCTGAAGAGATGCTACCTGAAGTATATAAACCAATGTTGCAAACACAGTATAGCATAGATTCTAGAATTTAATGTCTTTTTTTGTTAACTAGT ATGGAGCCAGCCGTATCTAACAAATGCTTGAAGACAAGTGAAGCCGAAGAAGAACAGTTAAACTGTGGTCTCCTTCACTGCGCTCACCTCGTACTTCCATGGCTGACCTCTCTCGAGCTCGCAACCATATCTCTCTCCTGCAAATCCCTCAATGCCACTTCCAAATCTATCACTCTCCGCCGGACTCTCGACGCTTCCAGATCCCTCGAGAAAATTCCCATCCCATTCCATAATTCAATCGACGATCGCCTCTACGCCTTCTTTATCTACACCCCCACGGTTATTATCTCCAATCAGCATTTCCAGCGCCAATGCTGGGGCTCAATTTCAGATCCCCAGTCGGTCCATGACGAGAGCGAGTCGATTAATTTGGTTGATAATTGGGTTGATGGTGTATTTGGATGCGATTGTGAAAATTGCGGGGATTTTGAGTTACAATGCCCCTGTTTGAGCTTTGATGGGTTGGAGGATGTTGCTAGCGAGTGTGGACCGCGATGTTCTTGTGGGCTGGAGTGTGAAAATCGGTTGACCCAGAGAGGAATTTCTGTTCGATTGAAGATTTTGAGAGATGAGAAGAAAGGATGGGGTTTGTATGCGGACGAGTTGATTCAAGAAGGGGCGTTCATTTGTGAGTATGCAGGTGAACTTTTGACCACTGAAGAAGCAAGAAGGCGGCAGAAAATATATGATGCACGTGCCAAAGGTGGGCGGTTTGCTTCATCTCTTCTCGTTGTGAGAGAGCATCTTCCATCTGGAAATGCATGTTTGCGAATGAACATCGACGCGACCTGGATTGGGAATGTCGCACGATTCATAAATCACTCTTGTGACGGAGGTAAAAAGGGTCTTAATCAGCAAAGATAG ATGGAGCCAGCCGTATCTAACAAATGCTTGAAGACAAGTGAAGCCGAAGAAGAACAGTTAAACTGTGGTCTCCTTCACTGCGCTCACCTCGTACTTCCATGGCTGACCTCTCTCGAGCTCGCAACCATATCTCTCTCCTGCAAATCCCTCAATGCCACTTCCAAATCTATCACTCTCCGCCGGACTCTCGACGCTTCCAGATCCCTCGAGAAAATTCCCATCCCATTCCATAATTCAATCGACGATCGCCTCTACGCCTTCTTTATCTACACCCCCACGGTTATTATCTCCAATCAGCATTTCCAGCGCCAATGCTGGGGCTCAATTTCAGATCCCCAGTCGGTCCATGACGAGAGCGAGTCGATTAATTTGGTTGATAATTGGGTTGATGGTGTATTTGGATGCGATTGTGAAAATTGCGGGGATTTTGAGTTACAATGCCCCTGTTTGAGCTTTGATGGGTTGGAGGATGTTGCTAGCGAGTGTGGACCGCGATGTTCTTGTGGGCTGGAGTGTGAAAATCGGTTGACCCAGAGAGGAATTTCTGTTCGATTGAAGATTTTGAGAGATGAGAAGAAAGGATGGGGTTTGTATGCGGACGAGTTGATTCAAGAAGGGGCGTTCATTTGTGAGTATGCAGGTGAACTTTTGACCACTGAAGAAGCAAGAAGGCGGCAGAAAATATATGATGCACGTGCCAAAGGTGGGCGGTTTGCTTCATCTCTTCTCGTTGTGAGAGAGCATCTTCCATCTGGAAATGCATGTTTGCGAATGAACATCGACGCGACCTGGATTGGGAATGTCGCACGATTCATAAATCACTCTTGTGACGGAGGTAAAAAGGGTCTTAATCAGCAAAGATAG MEPAVSNKCLKTSEAEEEQLNCGLLHCAHLVLPWLTSLELATISLSCKSLNATSKSITLRRTLDASRSLEKIPIPFHNSIDDRLYAFFIYTPTVIISNQHFQRQCWGSISDPQSVHDESESINLVDNWVDGVFGCDCENCGDFELQCPCLSFDGLEDVASECGPRCSCGLECENRLTQRGISVRLKILRDEKKGWGLYADELIQEGAFICEYAGELLTTEEARRRQKIYDARAKGGRFASSLLVVREHLPSGNACLRMNIDATWIGNVARFINHSCDGGKKGLNQQR
BLAST of CsaV3_3G040650 vs. NCBI nr
Match: XP_004136662.1 (PREDICTED: histone-lysine N-methyltransferase SUVR3 isoform X1 [Cucumis sativus] >KGN59489.1 hypothetical protein Csa_3G822400 [Cucumis sativus]) HSP 1 Score: 580.9 bits (1496), Expect = 2.4e-162 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. NCBI nr
Match: XP_011652203.1 (PREDICTED: histone-lysine N-methyltransferase SUVR3 isoform X2 [Cucumis sativus]) HSP 1 Score: 566.6 bits (1459), Expect = 4.8e-158 Identity = 275/279 (98.57%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. NCBI nr
Match: XP_008443304.1 (PREDICTED: histone-lysine N-methyltransferase SUVR3 isoform X1 [Cucumis melo]) HSP 1 Score: 552.0 bits (1421), Expect = 1.2e-153 Identity = 267/284 (94.01%), Postives = 272/284 (95.77%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. NCBI nr
Match: XP_008443306.1 (PREDICTED: histone-lysine N-methyltransferase SUVR3 isoform X2 [Cucumis melo]) HSP 1 Score: 537.7 bits (1384), Expect = 2.4e-149 Identity = 263/284 (92.61%), Postives = 268/284 (94.37%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. NCBI nr
Match: XP_022983825.1 (histone-lysine N-methyltransferase SUVR3 isoform X1 [Cucurbita maxima]) HSP 1 Score: 466.8 bits (1200), Expect = 5.1e-128 Identity = 227/279 (81.36%), Postives = 242/279 (86.74%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. TAIR10
Match: AT3G03750.2 (SET domain protein 20) HSP 1 Score: 261.9 bits (668), Expect = 4.6e-70 Identity = 144/267 (53.93%), Postives = 176/267 (65.92%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. TAIR10
Match: AT2G22740.2 (SU(VAR)3-9 homolog 6) HSP 1 Score: 99.8 bits (247), Expect = 3.0e-21 Identity = 78/242 (32.23%), Postives = 101/242 (41.74%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. TAIR10
Match: AT2G23740.2 (nucleic acid binding;sequence-specific DNA binding transcription factors;zinc ion binding) HSP 1 Score: 97.4 bits (241), Expect = 1.5e-20 Identity = 57/159 (35.85%), Postives = 81/159 (50.94%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. TAIR10
Match: AT2G35160.1 (SU(VAR)3-9 homolog 5) HSP 1 Score: 95.9 bits (237), Expect = 4.3e-20 Identity = 69/227 (30.40%), Postives = 98/227 (43.17%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. TAIR10
Match: AT5G04940.1 (SU(VAR)3-9 homolog 1) HSP 1 Score: 93.6 bits (231), Expect = 2.1e-19 Identity = 72/245 (29.39%), Postives = 103/245 (42.04%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. Swiss-Prot
Match: sp|Q9SRV2|SUVR3_ARATH (Histone-lysine N-methyltransferase SUVR3 OS=Arabidopsis thaliana OX=3702 GN=SUVR3 PE=2 SV=4) HSP 1 Score: 261.9 bits (668), Expect = 8.2e-69 Identity = 144/267 (53.93%), Postives = 176/267 (65.92%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. Swiss-Prot
Match: sp|Q80UJ9|SETMR_MOUSE (Histone-lysine N-methyltransferase SETMAR OS=Mus musculus OX=10090 GN=Setmar PE=2 SV=2) HSP 1 Score: 110.5 bits (275), Expect = 3.1e-23 Identity = 59/160 (36.88%), Postives = 83/160 (51.88%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. Swiss-Prot
Match: sp|Q5I0M0|SETMR_RAT (Histone-lysine N-methyltransferase SETMAR OS=Rattus norvegicus OX=10116 GN=Setmar PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 9.8e-22 Identity = 58/160 (36.25%), Postives = 80/160 (50.00%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. Swiss-Prot
Match: sp|A8XI75|SET23_CAEBR (Probable histone-lysine N-methyltransferase set-23 OS=Caenorhabditis briggsae OX=6238 GN=set-23 PE=3 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.2e-21 Identity = 60/165 (36.36%), Postives = 84/165 (50.91%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. Swiss-Prot
Match: sp|Q53H47|SETMR_HUMAN (Histone-lysine N-methyltransferase SETMAR OS=Homo sapiens OX=9606 GN=SETMAR PE=1 SV=2) HSP 1 Score: 100.9 bits (250), Expect = 2.4e-20 Identity = 55/160 (34.38%), Postives = 83/160 (51.88%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. TrEMBL
Match: tr|A0A0A0LF10|A0A0A0LF10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822400 PE=4 SV=1) HSP 1 Score: 580.9 bits (1496), Expect = 1.6e-162 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. TrEMBL
Match: tr|A0A1S3B7R7|A0A1S3B7R7_CUCME (histone-lysine N-methyltransferase SUVR3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486926 PE=4 SV=1) HSP 1 Score: 552.0 bits (1421), Expect = 8.0e-154 Identity = 267/284 (94.01%), Postives = 272/284 (95.77%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. TrEMBL
Match: tr|A0A1S3B8F3|A0A1S3B8F3_CUCME (histone-lysine N-methyltransferase SUVR3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486926 PE=4 SV=1) HSP 1 Score: 537.7 bits (1384), Expect = 1.6e-149 Identity = 263/284 (92.61%), Postives = 268/284 (94.37%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. TrEMBL
Match: tr|A0A2P5AN88|A0A2P5AN88_9ROSA (Methyltransferase OS=Trema orientalis OX=63057 GN=TorRG33x02_346060 PE=4 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 5.5e-86 Identity = 168/261 (64.37%), Postives = 197/261 (75.48%), Query Frame = 0
BLAST of CsaV3_3G040650 vs. TrEMBL
Match: tr|A0A2P5ATJ3|A0A2P5ATJ3_PARAD (Methyltransferase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_301700 PE=4 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 1.6e-85 Identity = 171/275 (62.18%), Postives = 203/275 (73.82%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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