CsaV3_3G038010 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G038010
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	RING-type E3 ubiquitin transferase
Location	chr3 : 31295374 .. 31296949 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCAAATTCATTTCTCACAATACAACAAACAACCAATCAATCAAACAATCCAAACCTCCAGCCTCCATCTATGGATGAACAAATCGAAGTCCCCCACTATTTCCTCTGCCCCATCTCCCTCCAAATCATGAAAGACCCTGTAACTCTTCCCTCCGGCATCACCTACGATCGCCACTCCATTGAAACTTGGCTCTTCTCCGGCAAAAACTCCTCCTGCCCCGTCACTAAACTCCCAGTCTCCGACTCCGATTCCGATCTCCTCACCCCCAACCACACCCTCCGCCGTCTCATCCAAGCTTGGTGTACTTTGAACTCCTCCCATGGCGTCGAACGTTTCCCCACTCCTAAACCCCCCATTCATAAATCCCAAATCCTTCACATTATTTCCACTTCCAACACTTCCCCTTCTTCCCAAATCTCCTCCATTCGCCGTCTCCGCTCCATTTCCGCCGAGTCTGAAACTAATCGCCGATGCGTTGAATTCGCCGGTGCGCCGGAGTTTTTAGTCTCTGTTATTGTGGGTTCTGATTCCTCGGCTTCTCATGAAGCCCTCTCCACTCTTCATAACCTCCGTCTCTCTGATTCAACGTTTAAATCATTGGCTACCCGCCCTGAATTCCTCGAGTCCTTGACCGATTTCATGAAATTACAACAGGGTACTCATGAATCGTCCAGAACGTACGCGGTGTTGATTTTGAAATCAATTATTGAAGTCGCTGAACCAATTCAACTAAGCTTCTTGAAACCCGAATTGTTTGTGCAAATCGTTGAGATTTTGAAAGATCGATCATCCTCTCAACAGATTTTCAAAGCGGCATTGGGTATTTTGATTGCGGTGAGTCCATTGGGGAGAAACAGACTGAAGGCAGTAGAAGCAGGTGGAGTTAGGGCTTTGGTTGAGATTTTACTGTCGTCGCCGGAAAAAAGAGTATGTGAAATGACATTGACGGCGATGGATATACTGTGTGGGTGTGCGGATGGAAGAGCGGCGCTGTTGGCACACGGCGGAGGGATGGCAGTGGTTTCGAAGAAGATATTGAGAGTGTCGCAATTGGGGAGTGAAAGGGCGGTGAGAATATTGTATTCGGTGGCTAAATTCTCAGGAAGTCCTGCGGTGTTGATGGAAATGGCGCAACTGGGGATTGTGGCAAAGCTATGTTTGGTTCTGCAAATTGAAAATGGAGGCAAGACGAAGGAGAAAGCTAAAGAGATTTTGAAAATGCATTCTCGTCTTTGGAAGAACTCACCTTGTATTCCTTCTAAATTGGCTTCTTCATATCCTACAAATTAAAAGGAATTTCTATCGACAAAAAAAGAAAAAACACATACACACATTTTAAAACTATTTTTCATTTTTCTTCTCATTTTTGTGTATATAATTCAATAGAATTGTAAACTATTAATTTCTAGTTAAATGAGAATCCAAAGGATCCACATTATTGTTTCTATGCAAACGTTTGTCTTTATAATTTAGTATGAATACATTTTATCCACACCTCCATCGAATATGCCTAATTACTCATTTAGTTTTTTATTAAAATTTGAAACACTTTTGAATTGTAGTAATTTTTACAC

mRNA sequence

ATGGATGAACAAATCGAAGTCCCCCACTATTTCCTCTGCCCCATCTCCCTCCAAATCATGAAAGACCCTGTAACTCTTCCCTCCGGCATCACCTACGATCGCCACTCCATTGAAACTTGGCTCTTCTCCGGCAAAAACTCCTCCTGCCCCGTCACTAAACTCCCAGTCTCCGACTCCGATTCCGATCTCCTCACCCCCAACCACACCCTCCGCCGTCTCATCCAAGCTTGGTGTACTTTGAACTCCTCCCATGGCGTCGAACGTTTCCCCACTCCTAAACCCCCCATTCATAAATCCCAAATCCTTCACATTATTTCCACTTCCAACACTTCCCCTTCTTCCCAAATCTCCTCCATTCGCCGTCTCCGCTCCATTTCCGCCGAGTCTGAAACTAATCGCCGATGCGTTGAATTCGCCGGTGCGCCGGAGTTTTTAGTCTCTGTTATTGTGGGTTCTGATTCCTCGGCTTCTCATGAAGCCCTCTCCACTCTTCATAACCTCCGTCTCTCTGATTCAACGTTTAAATCATTGGCTACCCGCCCTGAATTCCTCGAGTCCTTGACCGATTTCATGAAATTACAACAGGGTACTCATGAATCGTCCAGAACGTACGCGGTGTTGATTTTGAAATCAATTATTGAAGTCGCTGAACCAATTCAACTAAGCTTCTTGAAACCCGAATTGTTTGTGCAAATCGTTGAGATTTTGAAAGATCGATCATCCTCTCAACAGATTTTCAAAGCGGCATTGGGTATTTTGATTGCGGTGAGTCCATTGGGGAGAAACAGACTGAAGGCAGTAGAAGCAGGTGGAGTTAGGGCTTTGGTTGAGATTTTACTGTCGTCGCCGGAAAAAAGAGTATGTGAAATGACATTGACGGCGATGGATATACTGTGTGGGTGTGCGGATGGAAGAGCGGCGCTGTTGGCACACGGCGGAGGGATGGCAGTGGTTTCGAAGAAGATATTGAGAGTGTCGCAATTGGGGAGTGAAAGGGCGGTGAGAATATTGTATTCGGTGGCTAAATTCTCAGGAAGTCCTGCGGTGTTGATGGAAATGGCGCAACTGGGGATTGTGGCAAAGCTATGTTTGGTTCTGCAAATTGAAAATGGAGGCAAGACGAAGGAGAAAGCTAAAGAGATTTTGAAAATGCATTCTCGTCTTTGGAAGAACTCACCTTGTATTCCTTCTAAATTGGCTTCTTCATATCCTACAAATTAA

Coding sequence (CDS)

ATGGATGAACAAATCGAAGTCCCCCACTATTTCCTCTGCCCCATCTCCCTCCAAATCATGAAAGACCCTGTAACTCTTCCCTCCGGCATCACCTACGATCGCCACTCCATTGAAACTTGGCTCTTCTCCGGCAAAAACTCCTCCTGCCCCGTCACTAAACTCCCAGTCTCCGACTCCGATTCCGATCTCCTCACCCCCAACCACACCCTCCGCCGTCTCATCCAAGCTTGGTGTACTTTGAACTCCTCCCATGGCGTCGAACGTTTCCCCACTCCTAAACCCCCCATTCATAAATCCCAAATCCTTCACATTATTTCCACTTCCAACACTTCCCCTTCTTCCCAAATCTCCTCCATTCGCCGTCTCCGCTCCATTTCCGCCGAGTCTGAAACTAATCGCCGATGCGTTGAATTCGCCGGTGCGCCGGAGTTTTTAGTCTCTGTTATTGTGGGTTCTGATTCCTCGGCTTCTCATGAAGCCCTCTCCACTCTTCATAACCTCCGTCTCTCTGATTCAACGTTTAAATCATTGGCTACCCGCCCTGAATTCCTCGAGTCCTTGACCGATTTCATGAAATTACAACAGGGTACTCATGAATCGTCCAGAACGTACGCGGTGTTGATTTTGAAATCAATTATTGAAGTCGCTGAACCAATTCAACTAAGCTTCTTGAAACCCGAATTGTTTGTGCAAATCGTTGAGATTTTGAAAGATCGATCATCCTCTCAACAGATTTTCAAAGCGGCATTGGGTATTTTGATTGCGGTGAGTCCATTGGGGAGAAACAGACTGAAGGCAGTAGAAGCAGGTGGAGTTAGGGCTTTGGTTGAGATTTTACTGTCGTCGCCGGAAAAAAGAGTATGTGAAATGACATTGACGGCGATGGATATACTGTGTGGGTGTGCGGATGGAAGAGCGGCGCTGTTGGCACACGGCGGAGGGATGGCAGTGGTTTCGAAGAAGATATTGAGAGTGTCGCAATTGGGGAGTGAAAGGGCGGTGAGAATATTGTATTCGGTGGCTAAATTCTCAGGAAGTCCTGCGGTGTTGATGGAAATGGCGCAACTGGGGATTGTGGCAAAGCTATGTTTGGTTCTGCAAATTGAAAATGGAGGCAAGACGAAGGAGAAAGCTAAAGAGATTTTGAAAATGCATTCTCGTCTTTGGAAGAACTCACCTTGTATTCCTTCTAAATTGGCTTCTTCATATCCTACAAATTAA

Protein sequence

MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSDSDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIRRLRSISAESETNRRCVEFAGAPEFLVSVIVGSDSSASHEALSTLHNLRLSDSTFKSLATRPEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPELFVQIVEILKDRSSSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEKRVCEMTLTAMDILCGCADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVAKLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSKLASSYPTN

Homology

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BLAST of CsaV3_3G038010 vs. NCBI nr
Match: XP_004136517.1 (PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus] >KGN59215.1 hypothetical protein Csa_3G782630 [Cucumis sativus])

HSP 1 Score: 779.6 bits (2012), Expect = 5.1e-222
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0


Query: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD 60
           MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD
Sbjct: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD 60

Query: 61  SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIR 120
           SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIR
Sbjct: 61  SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIR 120

Query: 121 RLRSISAESETNRRCVEFAGAPEFLVSVIVGSDSSASHEALSTLHNLRLSDSTFKSLATR 180
           RLRSISAESETNRRCVEFAGAPEFLVSVIVGSDSSASHEALSTLHNLRLSDSTFKSLATR
Sbjct: 121 RLRSISAESETNRRCVEFAGAPEFLVSVIVGSDSSASHEALSTLHNLRLSDSTFKSLATR 180

Query: 181 PEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPELFVQIVEILKDRS 240
           PEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPELFVQIVEILKDRS
Sbjct: 181 PEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPELFVQIVEILKDRS 240

Query: 241 SSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEKRVCEMTLTAMDILCG 300
           SSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEKRVCEMTLTAMDILCG
Sbjct: 241 SSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEKRVCEMTLTAMDILCG 300

Query: 301 CADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVA 360
           CADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVA
Sbjct: 301 CADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVA 360

Query: 361 KLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSKLASSYPTN 407
           KLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSKLASSYPTN
Sbjct: 361 KLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSKLASSYPTN 406

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BLAST of CsaV3_3G038010 vs. NCBI nr
Match: XP_008442921.1 (PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis melo])

HSP 1 Score: 751.1 bits (1938), Expect = 1.9e-213
Identity = 391/406 (96.31%), Postives = 398/406 (98.03%), Query Frame = 0


Query: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD 60
           MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCP+TKLPVS SD
Sbjct: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPITKLPVSLSD 60

Query: 61  SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIR 120
           SDLLTPNHTLRRLIQAWCTLNSS+GVERFPTPKPPIHKSQILHIISTSNTSPSS ISSIR
Sbjct: 61  SDLLTPNHTLRRLIQAWCTLNSSYGVERFPTPKPPIHKSQILHIISTSNTSPSSLISSIR 120

Query: 121 RLRSISAESETNRRCVEFAGAPEFLVSVIVGSDSSASHEALSTLHNLRLSDSTFKSLATR 180
           RLRSISAESETNRRCVEFAGAPEFLVSVIV SDSSASHEALSTLHNLRLSDSTFKSLAT 
Sbjct: 121 RLRSISAESETNRRCVEFAGAPEFLVSVIVDSDSSASHEALSTLHNLRLSDSTFKSLATH 180

Query: 181 PEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPELFVQIVEILKDRS 240
           PE LESLTDFMKLQQGTHESSRTYAVLILKSI+EVA+PIQLSFLKPELFVQIVEILKDRS
Sbjct: 181 PEVLESLTDFMKLQQGTHESSRTYAVLILKSIVEVADPIQLSFLKPELFVQIVEILKDRS 240

Query: 241 SSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEKRVCEMTLTAMDILCG 300
           SS QIFKAALGILIAVSPLGRNRLKAVEAGGV ALVEILLSSPEKRVCEMTLTAMD+LCG
Sbjct: 241 SSLQIFKAALGILIAVSPLGRNRLKAVEAGGVGALVEILLSSPEKRVCEMTLTAMDLLCG 300

Query: 301 CADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVA 360
           CADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVA
Sbjct: 301 CADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVA 360

Query: 361 KLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSKLASSYPTN 407
           KLCLV+QIENG KTKEKAKEILKMHSR+WKNSPCIPSKLASSYPTN
Sbjct: 361 KLCLVMQIENGSKTKEKAKEILKMHSRVWKNSPCIPSKLASSYPTN 406

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BLAST of CsaV3_3G038010 vs. NCBI nr
Match: XP_023005635.1 (E3 ubiquitin-protein ligase PUB22-like [Cucurbita maxima])

HSP 1 Score: 575.9 bits (1483), Expect = 1.1e-160
Identity = 305/412 (74.03%), Postives = 353/412 (85.68%), Query Frame = 0


Query: 3   EQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSDSD 62
           E+IEVP+YFLCPISLQIMKDPVT+PSGITYDR SIETWLFS KN+SCP+TKLP+  +DSD
Sbjct: 2   EEIEVPNYFLCPISLQIMKDPVTVPSGITYDRPSIETWLFSTKNASCPITKLPI-PADSD 61

Query: 63  LLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIRRL 122
            LTPNHTLRRLIQAWCTL+S HG+ERFPTPKPPI+K QI  +IS+S+++PSS +S IRRL
Sbjct: 62  SLTPNHTLRRLIQAWCTLHSHHGIERFPTPKPPINKPQIHKLISSSSSTPSSLLSCIRRL 121

Query: 123 RSISAESETNRRCVEFAGAPEFLVSVIVGSDSS--------ASHEALSTLHNLRLSDSTF 182
           RS++AESE+NRRC+E AGAPEFL SVI+ S S         + HEALSTLHNLRLSDS  
Sbjct: 122 RSLAAESESNRRCIESAGAPEFLASVIINSISDNDNETALISCHEALSTLHNLRLSDSKL 181

Query: 183 KSLATRPEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPELFVQIVE 242
           KSL    E  +SLT  M  +QGT+E SR YA L+LKS++EVA+P++L+FLK ELFV+IV 
Sbjct: 182 KSLTVNAELFDSLTKVM--EQGTYE-SRAYAALLLKSLLEVADPMELTFLKSELFVEIVG 241

Query: 243 ILKDRSSSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEKRVCEMTLTA 302
           ILKD+ +SQQ  KAALGILI     GRN++KAVEAGGV ALVEILLS PE+RV EM LTA
Sbjct: 242 ILKDQ-TSQQSLKAALGILITACTWGRNKVKAVEAGGVVALVEILLSGPERRVSEMALTA 301

Query: 303 MDILCGCADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMA 362
           MD+LCGCA+GRAALL HGGGMAVVSKKILRVSQ+GSERAVRIL+SVAK+SGSPAVL EMA
Sbjct: 302 MDLLCGCAEGRAALLGHGGGMAVVSKKILRVSQVGSERAVRILFSVAKYSGSPAVLTEMA 361

Query: 363 QLGIVAKLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSKLASSYPTN 407
           QLGIVAKLCLVLQ+E+G KTKEKAKEILKMH+R+W+NS CIPSKLASSYP N
Sbjct: 362 QLGIVAKLCLVLQVESGSKTKEKAKEILKMHARVWRNSACIPSKLASSYPAN 408

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BLAST of CsaV3_3G038010 vs. NCBI nr
Match: XP_022952378.1 (E3 ubiquitin-protein ligase PUB22-like [Cucurbita moschata])

HSP 1 Score: 575.1 bits (1481), Expect = 1.9e-160
Identity = 304/412 (73.79%), Postives = 352/412 (85.44%), Query Frame = 0


Query: 3   EQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSDSD 62
           E+IEVP+YFLCPISLQIMKDPVT+PSGITYDR SIETWLFS KN+SCP+TKLP+  +DSD
Sbjct: 2   EEIEVPNYFLCPISLQIMKDPVTVPSGITYDRPSIETWLFSNKNASCPITKLPI-PADSD 61

Query: 63  LLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIRRL 122
            LTPNHTLRRLIQAWCTL+S HG+ERFPTPKPPI+K QI  +IS+S+++PSS +S IRRL
Sbjct: 62  SLTPNHTLRRLIQAWCTLHSHHGIERFPTPKPPINKPQIHKLISSSSSTPSSLLSCIRRL 121

Query: 123 RSISAESETNRRCVEFAGAPEFLVSVIVGSDSS--------ASHEALSTLHNLRLSDSTF 182
           RS++AESE+NRRC+E AGAPEFL SVI+ S S         + HEALSTLHNLRLSDS  
Sbjct: 122 RSLAAESESNRRCIESAGAPEFLASVIINSISDNDNETASISCHEALSTLHNLRLSDSKL 181

Query: 183 KSLATRPEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPELFVQIVE 242
           KSL    E  +SLT  M  +QGT+E SR YA L+ KS++EVA+P++L+FLK ELFV+IV 
Sbjct: 182 KSLTVNAELFDSLTKVM--EQGTYE-SRAYAALLFKSLLEVADPMELTFLKSELFVEIVG 241

Query: 243 ILKDRSSSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEKRVCEMTLTA 302
           ILKD+ +SQQ  KAALGILI     GRN++KAVEAGGV ALVEILLS PE+RV EM LTA
Sbjct: 242 ILKDQ-TSQQSLKAALGILITACTWGRNKVKAVEAGGVVALVEILLSGPERRVSEMALTA 301

Query: 303 MDILCGCADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMA 362
           MD+LCGCA+GRAALL HGGGMAVVSKKILRVSQ+GSERAVRIL+SVAK+SGSPAVL EMA
Sbjct: 302 MDLLCGCAEGRAALLGHGGGMAVVSKKILRVSQVGSERAVRILFSVAKYSGSPAVLTEMA 361

Query: 363 QLGIVAKLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSKLASSYPTN 407
           QLGIVAKLCLVLQ+E+G KTKEKAKEILKMH+R+W+NS CIPSKLASSYP N
Sbjct: 362 QLGIVAKLCLVLQVESGSKTKEKAKEILKMHARVWRNSACIPSKLASSYPAN 408

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BLAST of CsaV3_3G038010 vs. NCBI nr
Match: XP_023540239.1 (E3 ubiquitin-protein ligase PUB22-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 573.5 bits (1477), Expect = 5.5e-160
Identity = 304/412 (73.79%), Postives = 352/412 (85.44%), Query Frame = 0


Query: 3   EQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSDSD 62
           E+IEVP+YFLCPISLQIMKDPVT+PSGITYDR SIETWLFS KN+SCP+TKLP+  +DSD
Sbjct: 2   EEIEVPNYFLCPISLQIMKDPVTVPSGITYDRPSIETWLFSTKNASCPITKLPI-PADSD 61

Query: 63  LLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIRRL 122
            LTPNHTLRRLIQAWCTL+S HG+ERFPTPKPPI+K QI  +IS+S+++PSS +S IRRL
Sbjct: 62  SLTPNHTLRRLIQAWCTLHSDHGIERFPTPKPPINKPQIHKLISSSSSTPSSLLSCIRRL 121

Query: 123 RSISAESETNRRCVEFAGAPEFLVSVIVGSDSS--------ASHEALSTLHNLRLSDSTF 182
           RS++AESE+NRRC+E AGAPEFL SVI+ S S         + HEALSTLHNLRLSDS  
Sbjct: 122 RSLAAESESNRRCIESAGAPEFLASVIINSISDNDNETASISCHEALSTLHNLRLSDSKL 181

Query: 183 KSLATRPEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPELFVQIVE 242
           KSL    E  +SLT  M  +QGT+E SR YA L+LKS++EVA+P++L+FLK ELFV+IV 
Sbjct: 182 KSLTVNAELFDSLTKVM--EQGTYE-SRAYAALLLKSLLEVADPMELTFLKSELFVEIVG 241

Query: 243 ILKDRSSSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEKRVCEMTLTA 302
           ILKD+ +SQQ  KAALGILI     GRN++KAVEAGGV ALVEILLS PE+RV EM LTA
Sbjct: 242 ILKDQ-TSQQSLKAALGILITACTWGRNKVKAVEAGGVVALVEILLSGPERRVSEMVLTA 301

Query: 303 MDILCGCADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMA 362
           MD+LCGCA+GRAALL HGGGMAVVSKKILRVSQ+GSERAVRIL+ VAK+SGSPAVL EMA
Sbjct: 302 MDLLCGCAEGRAALLGHGGGMAVVSKKILRVSQVGSERAVRILFWVAKYSGSPAVLTEMA 361

Query: 363 QLGIVAKLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSKLASSYPTN 407
           QLGIVAKLCLVLQ+E+G KTKEKAKEILKMH+R+W+NS CIPSKLASSYP N
Sbjct: 362 QLGIVAKLCLVLQVESGSKTKEKAKEILKMHARVWRNSACIPSKLASSYPAN 408

[Close]

BLAST of CsaV3_3G038010 vs. TAIR10
Match: AT2G35930.1 (plant U-box 23)

HSP 1 Score: 428.7 bits (1101), Expect = 4.0e-120
Identity = 229/413 (55.45%), Postives = 309/413 (74.82%), Query Frame = 0


Query: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD 60
           MDE+IE+P +FLCPISL+IMKDPV + +GITYDR SIE WLF+GK +SCPVTK  ++D+D
Sbjct: 6   MDEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDAD 65

Query: 61  SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIR 120
              LTPNHTLRRLIQ+WCTLN+S+GVER PTP+PPI KS+I  +I  S +S  +Q+  ++
Sbjct: 66  ---LTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLK 125

Query: 121 RLRSISAESETNRRCVEFAGAPEFLVSVIVGSDS---SASHEALSTLHNLRLSDSTFKSL 180
           RLR I +E+ TN+RC+E AG PEFL + IV +DS   S + EAL+ L++L  S++  K+L
Sbjct: 126 RLRQIVSENATNKRCLEAAGVPEFLAN-IVSNDSENGSLTDEALNLLYHLETSETVLKNL 185

Query: 181 ATRPE---FLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPELFVQIVE 240
               +    ++SLT  M  Q+G +E SR YA L+LK+I+EVA+P+Q   LKPE+F ++V+
Sbjct: 186 LNNKKDNNIVKSLTKIM--QRGMYE-SRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQ 245

Query: 241 ILKDRSSSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLS---SPEKRVCEMT 300
           IL DR  SQ+  KAA+ IL+ + P GRNR KAVEAG +  ++E+L+    + E+R  EM 
Sbjct: 246 ILDDR-ISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMA 305

Query: 301 LTAMDILCGCADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLM 360
           +  +D+LC CA+GRA  L HG  +AVV KKILRVSQ  S+RAVR+L SV +F  +PA+L 
Sbjct: 306 MVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLH 365

Query: 361 EMAQLGIVAKLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSKLASSYP 405
           EM QLG+VAKLCLVLQ+  GGKTKEKAKE+LK+H+R+WK+SPC+P  +  +YP
Sbjct: 366 EMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLPKNMILAYP 410

[Close]

BLAST of CsaV3_3G038010 vs. TAIR10
Match: AT3G52450.1 (plant U-box 22)

HSP 1 Score: 406.8 bits (1044), Expect = 1.6e-113
Identity = 218/438 (49.77%), Postives = 297/438 (67.81%), Query Frame = 0


Query: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD 60
           MD++IE+P +FLCPISL IMKDPV + +GITYDR SIE WLFSGK +SCPVTK  ++++D
Sbjct: 1   MDQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETD 60

Query: 61  SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIR 120
              LTPNHTLRRLIQ+WCTLN+S+G+ER PTPKPPI KS+I  +I  S++S  +Q+  ++
Sbjct: 61  ---LTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLK 120

Query: 121 RLRSISAESETNRRCVEFAGAPEFLVSVIVGS---------------------------- 180
           RLR I +E+ TN+RC+E A  PEFL +++  S                            
Sbjct: 121 RLRQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENR 180

Query: 181 -DSSAS--HEALSTLHNLRLSDSTFKSLATRPEFLESLTDFMKLQQGTHESSRTYAVLIL 240
            DSS S   EALS L++L  S++  KSL    +    +    K+ Q     SR YA L+L
Sbjct: 181 FDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLL 240

Query: 241 KSIIEVAEPIQLSFLKPELFVQIVEILKDRSSSQQIFKAALGILIAVSPLGRNRLKAVEA 300
           K ++EVA+P+Q+  L+ ELF ++++IL D+  S +  ++A+ IL+   P GRNR KAVE 
Sbjct: 241 KKLLEVADPMQIILLERELFGEVIQILHDQ-ISHKATRSAMQILVITCPWGRNRHKAVEG 300

Query: 301 GGVRALVEILLS---SPEKRVCEMTLTAMDILCGCADGRAALLAHGGGMAVVSKKILRVS 360
           G +  ++E+L+    S E+R  EM +  +D+LC CA+GRA  L HG  +AVVSKKILRVS
Sbjct: 301 GTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVS 360

Query: 361 QLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVAKLCLVLQIENGGKTKEKAKEILKMHS 405
           Q+ SERAVR+L SV +F  +P++L EM QLG+VAKLCLVLQ+  G KTKEKAKE+LK+H+
Sbjct: 361 QITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHA 420

[Close]

BLAST of CsaV3_3G038010 vs. TAIR10
Match: AT3G11840.1 (plant U-box 24)

HSP 1 Score: 237.3 bits (604), Expect = 1.7e-62
Identity = 170/441 (38.55%), Postives = 232/441 (52.61%), Query Frame = 0


Query: 2   DEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSDS 61
           +E+IE+P+YF+CPISL+IMKDPVT  SGITYDR +I  WL   K  SCPVTK P+   DS
Sbjct: 19  EEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWL--EKVPSCPVTKQPL-PLDS 78

Query: 62  DLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIRR 121
           D LTPNH LRRLIQ WC  N + GV R  TP+ P  K  ++  I          +     
Sbjct: 79  D-LTPNHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGREET 138

Query: 122 LRSIS--AESETNRRCVEFAGAPEFLVSVIVGSDS---------SASHEALSTLHNLRLS 181
           L+ +   A    NRR +   G  + L+  +V   S             E+L  LH + + 
Sbjct: 139 LQKLEVLAMDGNNRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHLIGIP 198

Query: 182 DSTFKS-LATRPEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPELF 241
            +  K+ L      +ESLT  +  +      S+ Y +++L+++ E      +  L PE+F
Sbjct: 199 SNDAKTILMENDRVMESLTWVLHQEDFL---SKAYTIVLLRNLTEYTSSHIVERLNPEIF 258

Query: 242 VQIVEILKD----------------RSSS------------------QQIFKAALGILIA 301
             I+  LKD                +SSS                  +Q   AAL IL+ 
Sbjct: 259 KGIIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVTAALMILLE 318

Query: 302 VSPLGRNRLKAVEAGGVRALVEILLS-SPEKRVCEMTLTAMDILCGCADGRAALLAHGGG 361
            S   RNR   V+ G V  L+E+ +S + EKR+ E+ L  +  LC CA+GRA +LAH GG
Sbjct: 319 TSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRGG 378

Query: 362 MAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVAKLCLVLQIENGGKT 396
           +AVV+K++LRVS    +RA+ IL +V+KFS    V+ EM  +G V KLC VL ++ G   
Sbjct: 379 IAVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVLGMDCGLNL 438

[Close]

BLAST of CsaV3_3G038010 vs. TAIR10
Match: AT3G19380.1 (plant U-box 25)

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-47
Identity = 131/401 (32.67%), Postives = 223/401 (55.61%), Query Frame = 0


Query: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD 60
           +D  I++P++F CPISL++M+DPVT+ +G TYDR SIE+W+  G N++CPVT+ P+SD  
Sbjct: 8   LDLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDF- 67

Query: 61  SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIIST------SNTSPSS 120
              L PNHTLRRLIQ WC  N S+GVER PTPK P   + +  ++S       ++ S  S
Sbjct: 68  --TLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRS 127

Query: 121 QISSIRRLRSISAESETNRRCVEFAGAPEFLVSVIVGSDSSAS--HEALSTLHNLRLSD- 180
           + +++RRLR  + +S+ NR  +    A E L+ ++    +S+    E+L+ L  L +++ 
Sbjct: 128 RAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEP 187

Query: 181 STFKSLATRPEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQL--SFLKPE-L 240
           + F S+++ P  +E LT   +L   +   +R  A  +++ +    +   L  S    E +
Sbjct: 188 NQFVSISSDPGRVEFLT---RLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESV 247

Query: 241 FVQIVEILKDRSSSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEKRVC 300
           F  ++++L++  SS++  K  +  L A+  +   R  A+ AG    L++ L +  ++   
Sbjct: 248 FEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDT 307

Query: 301 EMTLTAMDILCGCADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPA 360
           E  L  +++LC   +G AA   H   + ++ K ILRVS   +E A   L  +A  +    
Sbjct: 308 ERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGAL--LALCTAEER 367

Query: 361 VLMEMAQLGIVAKLCLVLQIENGGKTKEKAKEILKMHSRLW 390
              E A  G+V +L L++Q E   + K+KA+++LK+    W
Sbjct: 368 WREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSW 400

[Close]

BLAST of CsaV3_3G038010 vs. TAIR10
Match: AT1G49780.1 (plant U-box 26)

HSP 1 Score: 183.3 bits (464), Expect = 2.9e-46
Identity = 128/412 (31.07%), Postives = 222/412 (53.88%), Query Frame = 0


Query: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD 60
           +D  I++P++F CPISL +M DPVT+ +G TYDR SI++W+  G N++CPVT++ +SD  
Sbjct: 8   LDLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMG-NTTCPVTRVALSDF- 67

Query: 61  SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIIST------SNTSPSS 120
              L PNHTLRRLIQ WC  N S+GVER PTPK P     +  ++S       ++ S  S
Sbjct: 68  --TLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRS 127

Query: 121 QISSIRRLRSISAESETNRRCVEFAGAPEFLVSVIVGSDSSAS------HEALSTLHNLR 180
           + ++IRRLR ++ +SE NR  +    A E LV ++     + S       E+L+ L  L 
Sbjct: 128 RAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLH 187

Query: 181 LSDSTFKSLATRPEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFL---K 240
           ++++  +++A+ P  +  +T   +L   +    R  A  +++ ++  A+ + L  +    
Sbjct: 188 MTETECEAVASDPSRVGFMT---RLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGS 247

Query: 241 PELFVQIVEILKDRSSSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEK 300
             +F  ++++LK+  SS++  K  +  + A+  + + R  A+ AG    L++ L +  ++
Sbjct: 248 DSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDR 307

Query: 301 RVCEMTLTAMDILCGCADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSG 360
              E  L  +++LC   +G AA   H   + ++ K ILRVS   +E A   L  +A  + 
Sbjct: 308 CDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGAL--LALCTA 367

Query: 361 SPAVLMEMAQLGIVAKLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPS 398
                 E A  G+V +L L++Q +   + K KA+ +LK+    W +   + S
Sbjct: 368 EERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVHS 410

[Close]

BLAST of CsaV3_3G038010 vs. Swiss-Prot
Match: sp|Q84TG3|PUB23_ARATH (E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana OX=3702 GN=PUB23 PE=1 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 7.2e-119
Identity = 229/413 (55.45%), Postives = 309/413 (74.82%), Query Frame = 0


Query: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD 60
           MDE+IE+P +FLCPISL+IMKDPV + +GITYDR SIE WLF+GK +SCPVTK  ++D+D
Sbjct: 6   MDEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDAD 65

Query: 61  SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIR 120
              LTPNHTLRRLIQ+WCTLN+S+GVER PTP+PPI KS+I  +I  S +S  +Q+  ++
Sbjct: 66  ---LTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCLK 125

Query: 121 RLRSISAESETNRRCVEFAGAPEFLVSVIVGSDS---SASHEALSTLHNLRLSDSTFKSL 180
           RLR I +E+ TN+RC+E AG PEFL + IV +DS   S + EAL+ L++L  S++  K+L
Sbjct: 126 RLRQIVSENATNKRCLEAAGVPEFLAN-IVSNDSENGSLTDEALNLLYHLETSETVLKNL 185

Query: 181 ATRPE---FLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPELFVQIVE 240
               +    ++SLT  M  Q+G +E SR YA L+LK+I+EVA+P+Q   LKPE+F ++V+
Sbjct: 186 LNNKKDNNIVKSLTKIM--QRGMYE-SRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQ 245

Query: 241 ILKDRSSSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLS---SPEKRVCEMT 300
           IL DR  SQ+  KAA+ IL+ + P GRNR KAVEAG +  ++E+L+    + E+R  EM 
Sbjct: 246 ILDDR-ISQKATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMA 305

Query: 301 LTAMDILCGCADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLM 360
           +  +D+LC CA+GRA  L HG  +AVV KKILRVSQ  S+RAVR+L SV +F  +PA+L 
Sbjct: 306 MVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCATPALLH 365

Query: 361 EMAQLGIVAKLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSKLASSYP 405
           EM QLG+VAKLCLVLQ+  GGKTKEKAKE+LK+H+R+WK+SPC+P  +  +YP
Sbjct: 366 EMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVWKDSPCLPKNMILAYP 410

[Close]

BLAST of CsaV3_3G038010 vs. Swiss-Prot
Match: sp|Q9SVC6|PUB22_ARATH (E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 2.9e-112
Identity = 218/438 (49.77%), Postives = 297/438 (67.81%), Query Frame = 0


Query: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD 60
           MD++IE+P +FLCPISL IMKDPV + +GITYDR SIE WLFSGK +SCPVTK  ++++D
Sbjct: 1   MDQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETD 60

Query: 61  SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIR 120
              LTPNHTLRRLIQ+WCTLN+S+G+ER PTPKPPI KS+I  +I  S++S  +Q+  ++
Sbjct: 61  ---LTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCLK 120

Query: 121 RLRSISAESETNRRCVEFAGAPEFLVSVIVGS---------------------------- 180
           RLR I +E+ TN+RC+E A  PEFL +++  S                            
Sbjct: 121 RLRQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENR 180

Query: 181 -DSSAS--HEALSTLHNLRLSDSTFKSLATRPEFLESLTDFMKLQQGTHESSRTYAVLIL 240
            DSS S   EALS L++L  S++  KSL    +    +    K+ Q     SR YA L+L
Sbjct: 181 FDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESRAYAALLL 240

Query: 241 KSIIEVAEPIQLSFLKPELFVQIVEILKDRSSSQQIFKAALGILIAVSPLGRNRLKAVEA 300
           K ++EVA+P+Q+  L+ ELF ++++IL D+  S +  ++A+ IL+   P GRNR KAVE 
Sbjct: 241 KKLLEVADPMQIILLERELFGEVIQILHDQ-ISHKATRSAMQILVITCPWGRNRHKAVEG 300

Query: 301 GGVRALVEILLS---SPEKRVCEMTLTAMDILCGCADGRAALLAHGGGMAVVSKKILRVS 360
           G +  ++E+L+    S E+R  EM +  +D+LC CA+GRA  L HG  +AVVSKKILRVS
Sbjct: 301 GTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVS 360

Query: 361 QLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVAKLCLVLQIENGGKTKEKAKEILKMHS 405
           Q+ SERAVR+L SV +F  +P++L EM QLG+VAKLCLVLQ+  G KTKEKAKE+LK+H+
Sbjct: 361 QITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHA 420

[Close]

BLAST of CsaV3_3G038010 vs. Swiss-Prot
Match: sp|Q9SF15|PUB24_ARATH (E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana OX=3702 GN=PUB24 PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.1e-61
Identity = 170/441 (38.55%), Postives = 232/441 (52.61%), Query Frame = 0


Query: 2   DEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSDS 61
           +E+IE+P+YF+CPISL+IMKDPVT  SGITYDR +I  WL   K  SCPVTK P+   DS
Sbjct: 5   EEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWL--EKVPSCPVTKQPL-PLDS 64

Query: 62  DLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIRR 121
           D LTPNH LRRLIQ WC  N + GV R  TP+ P  K  ++  I          +     
Sbjct: 65  D-LTPNHMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALGREET 124

Query: 122 LRSIS--AESETNRRCVEFAGAPEFLVSVIVGSDS---------SASHEALSTLHNLRLS 181
           L+ +   A    NRR +   G  + L+  +V   S             E+L  LH + + 
Sbjct: 125 LQKLEVLAMDGNNRRLMCECGVHKSLILFVVKCTSEDEDGRRRIKGLDESLRLLHLIGIP 184

Query: 182 DSTFKS-LATRPEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPELF 241
            +  K+ L      +ESLT  +  +      S+ Y +++L+++ E      +  L PE+F
Sbjct: 185 SNDAKTILMENDRVMESLTWVLHQEDFL---SKAYTIVLLRNLTEYTSSHIVERLNPEIF 244

Query: 242 VQIVEILKD----------------RSSS------------------QQIFKAALGILIA 301
             I+  LKD                +SSS                  +Q   AAL IL+ 
Sbjct: 245 KGIIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVTAALMILLE 304

Query: 302 VSPLGRNRLKAVEAGGVRALVEILLS-SPEKRVCEMTLTAMDILCGCADGRAALLAHGGG 361
            S   RNR   V+ G V  L+E+ +S + EKR+ E+ L  +  LC CA+GRA +LAH GG
Sbjct: 305 TSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRGG 364

Query: 362 MAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVAKLCLVLQIENGGKT 396
           +AVV+K++LRVS    +RA+ IL +V+KFS    V+ EM  +G V KLC VL ++ G   
Sbjct: 365 IAVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVLGMDCGLNL 424

[Close]

BLAST of CsaV3_3G038010 vs. Swiss-Prot
Match: sp|Q9LT79|PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.1e-46
Identity = 131/401 (32.67%), Postives = 223/401 (55.61%), Query Frame = 0


Query: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD 60
           +D  I++P++F CPISL++M+DPVT+ +G TYDR SIE+W+  G N++CPVT+ P+SD  
Sbjct: 8   LDLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDF- 67

Query: 61  SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIIST------SNTSPSS 120
              L PNHTLRRLIQ WC  N S+GVER PTPK P   + +  ++S       ++ S  S
Sbjct: 68  --TLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRS 127

Query: 121 QISSIRRLRSISAESETNRRCVEFAGAPEFLVSVIVGSDSSAS--HEALSTLHNLRLSD- 180
           + +++RRLR  + +S+ NR  +    A E L+ ++    +S+    E+L+ L  L +++ 
Sbjct: 128 RAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEP 187

Query: 181 STFKSLATRPEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQL--SFLKPE-L 240
           + F S+++ P  +E LT   +L   +   +R  A  +++ +    +   L  S    E +
Sbjct: 188 NQFVSISSDPGRVEFLT---RLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESV 247

Query: 241 FVQIVEILKDRSSSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEKRVC 300
           F  ++++L++  SS++  K  +  L A+  +   R  A+ AG    L++ L +  ++   
Sbjct: 248 FEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDT 307

Query: 301 EMTLTAMDILCGCADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPA 360
           E  L  +++LC   +G AA   H   + ++ K ILRVS   +E A   L  +A  +    
Sbjct: 308 ERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGAL--LALCTAEER 367

Query: 361 VLMEMAQLGIVAKLCLVLQIENGGKTKEKAKEILKMHSRLW 390
              E A  G+V +L L++Q E   + K+KA+++LK+    W
Sbjct: 368 WREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSW 400

[Close]

BLAST of CsaV3_3G038010 vs. Swiss-Prot
Match: sp|Q9FXA4|PUB26_ARATH (U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 5.2e-45
Identity = 128/412 (31.07%), Postives = 222/412 (53.88%), Query Frame = 0


Query: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD 60
           +D  I++P++F CPISL +M DPVT+ +G TYDR SI++W+  G N++CPVT++ +SD  
Sbjct: 8   LDLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMG-NTTCPVTRVALSDF- 67

Query: 61  SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIIST------SNTSPSS 120
              L PNHTLRRLIQ WC  N S+GVER PTPK P     +  ++S       ++ S  S
Sbjct: 68  --TLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVSVRS 127

Query: 121 QISSIRRLRSISAESETNRRCVEFAGAPEFLVSVIVGSDSSAS------HEALSTLHNLR 180
           + ++IRRLR ++ +SE NR  +    A E LV ++     + S       E+L+ L  L 
Sbjct: 128 RAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLH 187

Query: 181 LSDSTFKSLATRPEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFL---K 240
           ++++  +++A+ P  +  +T   +L   +    R  A  +++ ++  A+ + L  +    
Sbjct: 188 MTETECEAVASDPSRVGFMT---RLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGS 247

Query: 241 PELFVQIVEILKDRSSSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEK 300
             +F  ++++LK+  SS++  K  +  + A+  + + R  A+ AG    L++ L +  ++
Sbjct: 248 DSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDR 307

Query: 301 RVCEMTLTAMDILCGCADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSG 360
              E  L  +++LC   +G AA   H   + ++ K ILRVS   +E A   L  +A  + 
Sbjct: 308 CDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGAL--LALCTA 367

Query: 361 SPAVLMEMAQLGIVAKLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPS 398
                 E A  G+V +L L++Q +   + K KA+ +LK+    W +   + S
Sbjct: 368 EERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVHS 410

[Close]

BLAST of CsaV3_3G038010 vs. TrEMBL
Match: tr|A0A0A0LB33|A0A0A0LB33_CUCSA (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G782630 PE=4 SV=1)

HSP 1 Score: 779.6 bits (2012), Expect = 3.4e-222
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0


Query: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD 60
           MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD
Sbjct: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD 60

Query: 61  SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIR 120
           SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIR
Sbjct: 61  SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIR 120

Query: 121 RLRSISAESETNRRCVEFAGAPEFLVSVIVGSDSSASHEALSTLHNLRLSDSTFKSLATR 180
           RLRSISAESETNRRCVEFAGAPEFLVSVIVGSDSSASHEALSTLHNLRLSDSTFKSLATR
Sbjct: 121 RLRSISAESETNRRCVEFAGAPEFLVSVIVGSDSSASHEALSTLHNLRLSDSTFKSLATR 180

Query: 181 PEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPELFVQIVEILKDRS 240
           PEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPELFVQIVEILKDRS
Sbjct: 181 PEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPELFVQIVEILKDRS 240

Query: 241 SSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEKRVCEMTLTAMDILCG 300
           SSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEKRVCEMTLTAMDILCG
Sbjct: 241 SSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEKRVCEMTLTAMDILCG 300

Query: 301 CADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVA 360
           CADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVA
Sbjct: 301 CADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVA 360

Query: 361 KLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSKLASSYPTN 407
           KLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSKLASSYPTN
Sbjct: 361 KLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSKLASSYPTN 406

[Close]

BLAST of CsaV3_3G038010 vs. TrEMBL
Match: tr|A0A1S3B6U7|A0A1S3B6U7_CUCME (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103486683 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 1.3e-213
Identity = 391/406 (96.31%), Postives = 398/406 (98.03%), Query Frame = 0


Query: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD 60
           MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCP+TKLPVS SD
Sbjct: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPITKLPVSLSD 60

Query: 61  SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIR 120
           SDLLTPNHTLRRLIQAWCTLNSS+GVERFPTPKPPIHKSQILHIISTSNTSPSS ISSIR
Sbjct: 61  SDLLTPNHTLRRLIQAWCTLNSSYGVERFPTPKPPIHKSQILHIISTSNTSPSSLISSIR 120

Query: 121 RLRSISAESETNRRCVEFAGAPEFLVSVIVGSDSSASHEALSTLHNLRLSDSTFKSLATR 180
           RLRSISAESETNRRCVEFAGAPEFLVSVIV SDSSASHEALSTLHNLRLSDSTFKSLAT 
Sbjct: 121 RLRSISAESETNRRCVEFAGAPEFLVSVIVDSDSSASHEALSTLHNLRLSDSTFKSLATH 180

Query: 181 PEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPELFVQIVEILKDRS 240
           PE LESLTDFMKLQQGTHESSRTYAVLILKSI+EVA+PIQLSFLKPELFVQIVEILKDRS
Sbjct: 181 PEVLESLTDFMKLQQGTHESSRTYAVLILKSIVEVADPIQLSFLKPELFVQIVEILKDRS 240

Query: 241 SSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEKRVCEMTLTAMDILCG 300
           SS QIFKAALGILIAVSPLGRNRLKAVEAGGV ALVEILLSSPEKRVCEMTLTAMD+LCG
Sbjct: 241 SSLQIFKAALGILIAVSPLGRNRLKAVEAGGVGALVEILLSSPEKRVCEMTLTAMDLLCG 300

Query: 301 CADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVA 360
           CADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVA
Sbjct: 301 CADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGSPAVLMEMAQLGIVA 360

Query: 361 KLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSKLASSYPTN 407
           KLCLV+QIENG KTKEKAKEILKMHSR+WKNSPCIPSKLASSYPTN
Sbjct: 361 KLCLVMQIENGSKTKEKAKEILKMHSRVWKNSPCIPSKLASSYPTN 406

[Close]

BLAST of CsaV3_3G038010 vs. TrEMBL
Match: tr|W9SK34|W9SK34_9ROSA (RING-type E3 ubiquitin transferase OS=Morus notabilis OX=981085 GN=L484_016918 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 2.5e-129
Identity = 247/426 (57.98%), Postives = 327/426 (76.76%), Query Frame = 0


Query: 1   MDEQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSD 60
           MD +I+VP +FLCPISL+IMKDPVT+ +GITYDR SIE WLFSGKN +CPVTK  +SDSD
Sbjct: 1   MDTEIDVPPFFLCPISLEIMKDPVTVLTGITYDRESIEKWLFSGKNDTCPVTKQVLSDSD 60

Query: 61  SDLLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIR 120
              LTPNHTLRRLIQAWCT+N++ G+ER PTPKPPI KSQI  ++S +  SP SQI  +R
Sbjct: 61  ---LTPNHTLRRLIQAWCTMNAALGIERIPTPKPPISKSQIAKLLSDAK-SPQSQIKCLR 120

Query: 121 RLRSISAESETNRRCVEFAGAPEFLVSVIVGSDS---------------------SASHE 180
           RLRSI+AESETN+RC+E AGA EFLVS+I   ++                     SAS E
Sbjct: 121 RLRSIAAESETNKRCLESAGAVEFLVSLIANDNNENAVSSPLSSSENDESFDFARSASDE 180

Query: 181 ALSTLHNLRLSDSTFKSLATR-PEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEP 240
           AL+ LHNL LS++  K L  R  EF++SLT  M+  QG+++ SR Y++++LKS+ +VA+P
Sbjct: 181 ALTILHNLHLSETVLKKLIDRNGEFVDSLTRVMR--QGSYD-SRAYSIMLLKSMFDVADP 240

Query: 241 IQLSFLKPELFVQIVEILKDRSSSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEI 300
           +++  L+ E + ++V+IL+D+  S Q  KAAL +L+ + P GRNR+KAVEAG V  L+E+
Sbjct: 241 MRMISLRTEFYAELVQILRDQ-ISPQASKAALQLLVQLCPWGRNRIKAVEAGAVAVLIEL 300

Query: 301 LLSSPEKRVCEMTLTAMDILCGCADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILY 360
           LL S E+R CEM LT +D++CGCA+GRA L+ H  G+AVVSK++LRVS +GSE+A+RIL+
Sbjct: 301 LLDSVERRPCEMILTGLDLMCGCAEGRAELIRHAAGLAVVSKRVLRVSHIGSEKAMRILF 360

Query: 361 SVAKFSGSPAVLMEMAQLGIVAKLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSK 405
           SVA+FS +PAVL EM QLG+VAKLCLVLQ++ GGKTKEKA+EIL++H+R W+NSPC+P +
Sbjct: 361 SVARFSATPAVLAEMLQLGVVAKLCLVLQVDCGGKTKEKAREILRLHARTWRNSPCVPMR 418

[Close]

BLAST of CsaV3_3G038010 vs. TrEMBL
Match: tr|A0A2P5AU41|A0A2P5AU41_9ROSA (RING-type E3 ubiquitin transferase OS=Trema orientalis OX=63057 GN=TorRG33x02_341380 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.1e-127
Identity = 248/420 (59.05%), Postives = 323/420 (76.90%), Query Frame = 0


Query: 3   EQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSDSD 62
           ++IEVP +FLCPISL+IMKDPVT+ +GITYDR SIE WLFSGKN +CPVTK P+ DS+  
Sbjct: 2   DEIEVPPFFLCPISLEIMKDPVTVSTGITYDRESIEKWLFSGKNETCPVTKQPIPDSE-- 61

Query: 63  LLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIRRL 122
            LTPNHTLRRLIQAWCT+N+S G+ER PTPKPP++K+QI+ +I+ +  SP SQI  +RRL
Sbjct: 62  -LTPNHTLRRLIQAWCTMNASLGIERIPTPKPPVNKTQIVKLINDAK-SPQSQIKCLRRL 121

Query: 123 RSISAESETNRRCVEFAGAPEFLVSVIVGSD--------------SSASHEALSTLHNLR 182
           RSI+AESETN+RC+E AGA +FL S+I  +D              + AS EAL  L NL 
Sbjct: 122 RSIAAESETNKRCLEAAGAVDFLASLIGNNDXXXXXXXXMSFDYFTRASDEALCVLSNLH 181

Query: 183 LSDSTFKSL-ATRPEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKPE 242
           LS++  K+L A    F+ESLT  M  Q+G++E SR +AV++LKS +EVA+P+++  L+PE
Sbjct: 182 LSETVLKNLMAKNLGFVESLTKVM--QRGSYE-SRVHAVVLLKSAMEVADPMRIIGLRPE 241

Query: 243 LFVQIVEILKDRSSSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILL---SSPE 302
            FV++V++LKD+  S+   KAAL +LI + P GRNR+KAVEAG V  L+E+LL   +S  
Sbjct: 242 FFVELVQVLKDQQVSRPALKAALHLLIQLCPWGRNRIKAVEAGAVPVLIELLLEVNASER 301

Query: 303 KRVCEMTLTAMDILCGCADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFS 362
           +R CEM + A+D+LCGCA+GRA  LAHG G+AVVSKKILRVSQ+ SE+AVRIL+S++KFS
Sbjct: 302 RRCCEMAMAALDLLCGCAEGRAEFLAHGAGIAVVSKKILRVSQVVSEKAVRILFSISKFS 361

Query: 363 GSPAVLMEMAQLGIVAKLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSKLASSYP 405
            +  VL EM QLG+VAKLCLVLQ++ G KTKEKA+EIL++H+R WKNS C+P  L SSYP
Sbjct: 362 ATSGVLQEMLQLGVVAKLCLVLQVDCGSKTKEKAREILRLHARTWKNSSCVPMHLLSSYP 414

[Close]

BLAST of CsaV3_3G038010 vs. TrEMBL
Match: tr|A0A1R3HE41|A0A1R3HE41_9ROSI (RING-type E3 ubiquitin transferase OS=Corchorus olitorius OX=93759 GN=COLO4_29566 PE=4 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 2.6e-126
Identity = 237/418 (56.70%), Postives = 322/418 (77.03%), Query Frame = 0


Query: 3   EQIEVPHYFLCPISLQIMKDPVTLPSGITYDRHSIETWLFSGKNSSCPVTKLPVSDSDSD 62
           E+I+VP +F+CPISL+IMKDPV + +GITYDR SIE WLFSGKN++CPVTK  +SD +  
Sbjct: 2   EEIDVPSFFVCPISLEIMKDPVIVSTGITYDRESIEKWLFSGKNTTCPVTKQNISDGE-- 61

Query: 63  LLTPNHTLRRLIQAWCTLNSSHGVERFPTPKPPIHKSQILHIISTSNTSPSSQISSIRRL 122
            LTPNHTLRRLIQ+WC LN+SHG+ER PTPKPPI KSQI+ +++ + TSP  QI  +++L
Sbjct: 62  -LTPNHTLRRLIQSWCMLNASHGIERIPTPKPPISKSQIIKLLNDA-TSPQQQIKCLKKL 121

Query: 123 RSISAESETNRRCVEFAGAPEFLVSVIVGSDSSASH---------------EALSTLHNL 182
           +SI++E+ TN+RC+E +GA EFL S+I   +S+ +                EALS LHNL
Sbjct: 122 QSIASENGTNKRCMESSGAVEFLASIITNFESTVAEESLIDYEFESVRPTDEALSILHNL 181

Query: 183 RLSDSTFKSL-ATRPEFLESLTDFMKLQQGTHESSRTYAVLILKSIIEVAEPIQLSFLKP 242
           +LS+S  K+L     +F+ +LT  M  Q+G++E SR YAVL+LKS++E+A+P+QL  L+ 
Sbjct: 182 QLSESALKNLMGKNGDFIATLTKVM--QRGSYE-SRAYAVLLLKSMVEIADPMQLIGLRT 241

Query: 243 ELFVQIVEILKDRSSSQQIFKAALGILIAVSPLGRNRLKAVEAGGVRALVEILLSSPEKR 302
           ELF+++V++L D+  SQQ  KA L +L++V P GRN++KA EAG V  L+++LL S E+R
Sbjct: 242 ELFIELVQVLHDQ-ISQQASKATLQLLVSVCPWGRNKIKAAEAGAVPVLIDLLLDSTERR 301

Query: 303 VCEMTLTAMDILCGCADGRAALLAHGGGMAVVSKKILRVSQLGSERAVRILYSVAKFSGS 362
           +CEM LT +D LC CA+GRAALL+HG G+A+VSKKILRVS + SERAVRIL S++KF  +
Sbjct: 302 ICEMALTVLDALCACAEGRAALLSHGAGLAIVSKKILRVSHVASERAVRILLSISKFCAT 361

Query: 363 PAVLMEMAQLGIVAKLCLVLQIENGGKTKEKAKEILKMHSRLWKNSPCIPSKLASSYP 405
             VL EM QLG+VAKLCLV+Q++ G KTKE+A+E+LK+H+R+WKNSPCIP+ L SSYP
Sbjct: 362 SNVLQEMLQLGVVAKLCLVIQVDCGSKTKERAREVLKLHARVWKNSPCIPTNLISSYP 411

The following BLAST results are available for this feature:

BLAST of CsaV3_3G038010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136517.1	5.1e-222	100.00	PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis sativus] >KGN59215.1 ...	[more]
XP_008442921.1	1.9e-213	96.31	PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Cucumis melo]	[more]
XP_023005635.1	1.1e-160	74.03	E3 ubiquitin-protein ligase PUB22-like [Cucurbita maxima]	[more]
XP_022952378.1	1.9e-160	73.79	E3 ubiquitin-protein ligase PUB22-like [Cucurbita moschata]	[more]
XP_023540239.1	5.5e-160	73.79	E3 ubiquitin-protein ligase PUB22-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G038010 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35930.1	4.0e-120	55.45	plant U-box 23	[more]
AT3G52450.1	1.6e-113	49.77	plant U-box 22	[more]
AT3G11840.1	1.7e-62	38.55	plant U-box 24	[more]
AT3G19380.1	1.2e-47	32.67	plant U-box 25	[more]
AT1G49780.1	2.9e-46	31.07	plant U-box 26	[more]

BLAST of CsaV3_3G038010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84TG3\|PUB23_ARATH	7.2e-119	55.45	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana OX=3702 GN=PUB23 PE=1 ...	[more]
sp\|Q9SVC6\|PUB22_ARATH	2.9e-112	49.77	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana OX=3702 GN=PUB22 PE=1 ...	[more]
sp\|Q9SF15\|PUB24_ARATH	3.1e-61	38.55	E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana OX=3702 GN=PUB24 PE=1 ...	[more]
sp\|Q9LT79\|PUB25_ARATH	2.1e-46	32.67	U-box domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=PUB25 PE=2...	[more]
sp\|Q9FXA4\|PUB26_ARATH	5.2e-45	31.07	U-box domain-containing protein 26 OS=Arabidopsis thaliana OX=3702 GN=PUB26 PE=2...	[more]

BLAST of CsaV3_3G038010 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LB33\|A0A0A0LB33_CUCSA	3.4e-222	100.00	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G782630 PE...	[more]
tr\|A0A1S3B6U7\|A0A1S3B6U7_CUCME	1.3e-213	96.31	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103486683 PE=4 ...	[more]
tr\|W9SK34\|W9SK34_9ROSA	2.5e-129	57.98	RING-type E3 ubiquitin transferase OS=Morus notabilis OX=981085 GN=L484_016918 P...	[more]
tr\|A0A2P5AU41\|A0A2P5AU41_9ROSA	1.1e-127	59.05	RING-type E3 ubiquitin transferase OS=Trema orientalis OX=63057 GN=TorRG33x02_34...	[more]
tr\|A0A1R3HE41\|A0A1R3HE41_9ROSI	2.6e-126	56.70	RING-type E3 ubiquitin transferase OS=Corchorus olitorius OX=93759 GN=COLO4_2956...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0004842	ubiquitin-protein transferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0016567	protein ubiquitination

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR011989	ARM-like
IPR013083	Znf_RING/FYVE/PHD
IPR003613	Ubox_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0016874	ligase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G038010.1	CsaV3_3G038010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 10..77 e-value: 4.8E-30 score: 115.8
IPR003613	U box domain	PFAM	PF04564	U-box	coord: 7..81 e-value: 6.9E-20 score: 70.9
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 6..84 score: 35.933
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 1..88 e-value: 6.3E-28 score: 98.7
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 95..387 e-value: 8.9E-22 score: 79.3
None	No IPR available	PANTHER	PTHR22849:SF54	SUBFAMILY NOT NAMED	coord: 1..404
None	No IPR available	PANTHER	PTHR22849	WDSAM1 PROTEIN	coord: 1..404
None	No IPR available	CDD	cd16664	RING-Ubox_PUB	coord: 11..53 e-value: 6.57128E-20 score: 81.5111
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 4..85
IPR016024	Armadillo-type fold	SUPERFAMILY	SSF48371	ARM repeat	coord: 102..372

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G038010	CSPI06G23430	Wild cucumber (PI 183967)	cpicucB337
CsaV3_3G038010	CSPI03G35650	Wild cucumber (PI 183967)	cpicucB145
CsaV3_3G038010	Cucsa.185910	Cucumber (Gy14) v1	cgycucB296
CsaV3_3G038010	Cucsa.241890	Cucumber (Gy14) v1	cgycucB363
CsaV3_3G038010	CmaCh14G003620	Cucurbita maxima (Rimu)	cmacucB0279
CsaV3_3G038010	CmaCh20G001460	Cucurbita maxima (Rimu)	cmacucB0658
CsaV3_3G038010	CmaCh06G005270	Cucurbita maxima (Rimu)	cmacucB0966
CsaV3_3G038010	CmoCh06G005260	Cucurbita moschata (Rifu)	cmocucB0954
CsaV3_3G038010	Cp4.1LG08g09610	Cucurbita pepo (Zucchini)	cpecucB1057
CsaV3_3G038010	CsGy3G033130	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G038010	CsGy6G022720	Cucumber (Gy14) v2	cgybcucB272
CsaV3_3G038010	Carg16216	Silver-seed gourd	carcucB0714
CsaV3_3G038010	Carg18410	Silver-seed gourd	carcucB0445
CsaV3_3G038010	Cla017623	Watermelon (97103) v1	cucwmB208
CsaV3_3G038010	Cla008618	Watermelon (97103) v1	cucwmB277
CsaV3_3G038010	MELO3C009543	Melon (DHL92) v3.5.1	cucmeB218
CsaV3_3G038010	MELO3C014520	Melon (DHL92) v3.5.1	cucmeB234
CsaV3_3G038010	ClCG10G018310	Watermelon (Charleston Gray)	cucwcgB199
CsaV3_3G038010	ClCG02G022440	Watermelon (Charleston Gray)	cucwcgB216
CsaV3_3G038010	Lsi10G011360	Bottle gourd (USVL1VR-Ls)	cuclsiB178
CsaV3_3G038010	Lsi03G018160	Bottle gourd (USVL1VR-Ls)	cuclsiB203
CsaV3_3G038010	MELO3C014520.2	Melon (DHL92) v3.6.1	cucmedB226
CsaV3_3G038010	MELO3C009543.2	Melon (DHL92) v3.6.1	cucmedB211
CsaV3_3G038010	Cla97C10G201270	Watermelon (97103) v2	cucwmbB187
CsaV3_3G038010	Cla97C02G048520	Watermelon (97103) v2	cucwmbB198
CsaV3_3G038010	Bhi11G001982	Wax gourd	cucwgoB243
CsaV3_3G038010	Bhi10G000148	Wax gourd	cucwgoB327

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_3G038010	CsaV3_6G038570	Cucumber (Chinese Long) v3	cuccucB139

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G038010	Cucumber (Chinese Long) v3	cuccucB136
CsaV3_3G038010	Silver-seed gourd	carcucB0269
CsaV3_3G038010	Silver-seed gourd	carcucB0279
CsaV3_3G038010	Silver-seed gourd	carcucB0846
CsaV3_3G038010	Cucumber (Gy14) v2	cgybcucB268
CsaV3_3G038010	Cucumber (Gy14) v1	cgycucB084
CsaV3_3G038010	Cucurbita maxima (Rimu)	cmacucB0720
CsaV3_3G038010	Cucurbita maxima (Rimu)	cmacucB0788
CsaV3_3G038010	Cucurbita maxima (Rimu)	cmacucB1014
CsaV3_3G038010	Cucurbita moschata (Rifu)	cmocucB0270
CsaV3_3G038010	Cucurbita moschata (Rifu)	cmocucB0708
CsaV3_3G038010	Cucurbita moschata (Rifu)	cmocucB0771
CsaV3_3G038010	Cucurbita moschata (Rifu)	cmocucB0997
CsaV3_3G038010	Cucurbita pepo (Zucchini)	cpecucB0594
CsaV3_3G038010	Cucurbita pepo (Zucchini)	cpecucB0747
CsaV3_3G038010	Bottle gourd (USVL1VR-Ls)	cuclsiB185
CsaV3_3G038010	Bottle gourd (USVL1VR-Ls)	cuclsiB207
CsaV3_3G038010	Melon (DHL92) v3.5.1	cucmeB261
CsaV3_3G038010	Melon (DHL92) v3.6.1	cucmedB256
CsaV3_3G038010	Wax gourd	cucwgoB337