CsaV3_3G034290 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G034290
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 29138788 .. 29139024 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCTACACCGATATCACTACAAACAATGTGAGAAATTAAGATCCCATGTCATAGTCCAGCCCGAATCTGATTCCAACGTTCAATTTCCATACTTGAATGAAAAAGCTTCAAAACGTTTTCAAAGACAACTGATTCTAAACAATTCCATCGAATTATTGTACAAGAAATCTCTCACTCGTCTTCTTCGGCTCAGTAGATCCATTTGCAAGCAAAGTAGTCGTGGACGAAGATAA

mRNA sequence

ATGAATCTACACCGATATCACTACAAACAATGTGAGAAATTAAGATCCCATGTCATAGTCCAGCCCGAATCTGATTCCAACGTTCAATTTCCATACTTGAATGAAAAAGCTTCAAAACGTTTTCAAAGACAACTGATTCTAAACAATTCCATCGAATTATTGTACAAGAAATCTCTCACTCGTCTTCTTCGGCTCAGTAGATCCATTTGCAAGCAAAGTAGTCGTGGACGAAGATAA

Coding sequence (CDS)

ATGAATCTACACCGATATCACTACAAACAATGTGAGAAATTAAGATCCCATGTCATAGTCCAGCCCGAATCTGATTCCAACGTTCAATTTCCATACTTGAATGAAAAAGCTTCAAAACGTTTTCAAAGACAACTGATTCTAAACAATTCCATCGAATTATTGTACAAGAAATCTCTCACTCGTCTTCTTCGGCTCAGTAGATCCATTTGCAAGCAAAGTAGTCGTGGACGAAGATAA

Protein sequence

MNLHRYHYKQCEKLRSHVIVQPESDSNVQFPYLNEKASKRFQRQLILNNSIELLYKKSLTRLLRLSRSICKQSSRGRR
BLAST of CsaV3_3G034290 vs. NCBI nr
Match: KGN58807.1 (hypothetical protein Csa_3G732635 [Cucumis sativus])

HSP 1 Score: 153.7 bits (387), Expect = 2.6e-34
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0

Query: 1  MNLHRYHYKQCEKLRSHVIVQPESDSNVQFPYLNEKASKRFQRQLILNNSIELLYKKSLT 60
          MNLHRYHYKQCEKLRSHVIVQPESDSNVQFPYLNEKASKRFQRQLILNNSIELLYKKSLT
Sbjct: 1  MNLHRYHYKQCEKLRSHVIVQPESDSNVQFPYLNEKASKRFQRQLILNNSIELLYKKSLT 60

Query: 61 RLLRLSRSICKQSSRGRR 79
          RLLRLSRSICKQSSRGRR
Sbjct: 61 RLLRLSRSICKQSSRGRR 78

BLAST of CsaV3_3G034290 vs. TrEMBL
Match: tr|A0A0A0LDI7|A0A0A0LDI7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732635 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.7e-34
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0

Query: 1  MNLHRYHYKQCEKLRSHVIVQPESDSNVQFPYLNEKASKRFQRQLILNNSIELLYKKSLT 60
          MNLHRYHYKQCEKLRSHVIVQPESDSNVQFPYLNEKASKRFQRQLILNNSIELLYKKSLT
Sbjct: 1  MNLHRYHYKQCEKLRSHVIVQPESDSNVQFPYLNEKASKRFQRQLILNNSIELLYKKSLT 60

Query: 61 RLLRLSRSICKQSSRGRR 79
          RLLRLSRSICKQSSRGRR
Sbjct: 61 RLLRLSRSICKQSSRGRR 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN58807.12.6e-34100.00hypothetical protein Csa_3G732635 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LDI7|A0A0A0LDI7_CUCSA1.7e-34100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G732635 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G034290.1CsaV3_3G034290.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G034290Cucumber (Chinese Long) v3cuccucB024
CsaV3_3G034290Cucumber (Chinese Long) v3cuccucB116
CsaV3_3G034290Cucumber (Chinese Long) v3cuccucB147
CsaV3_3G034290Silver-seed gourdcarcucB0019
CsaV3_3G034290Silver-seed gourdcarcucB0181
CsaV3_3G034290Silver-seed gourdcarcucB0292
CsaV3_3G034290Silver-seed gourdcarcucB0475
CsaV3_3G034290Silver-seed gourdcarcucB0591
CsaV3_3G034290Silver-seed gourdcarcucB0613
CsaV3_3G034290Silver-seed gourdcarcucB1041
CsaV3_3G034290Cucumber (Gy14) v2cgybcucB027
CsaV3_3G034290Cucumber (Gy14) v2cgybcucB117
CsaV3_3G034290Cucumber (Gy14) v2cgybcucB169
CsaV3_3G034290Cucumber (Gy14) v2cgybcucB275
CsaV3_3G034290Cucumber (Gy14) v1cgycucB056
CsaV3_3G034290Cucumber (Gy14) v1cgycucB198
CsaV3_3G034290Cucumber (Gy14) v1cgycucB281
CsaV3_3G034290Cucurbita maxima (Rimu)cmacucB0279
CsaV3_3G034290Cucurbita maxima (Rimu)cmacucB0335
CsaV3_3G034290Cucurbita maxima (Rimu)cmacucB0552
CsaV3_3G034290Cucurbita maxima (Rimu)cmacucB0785
CsaV3_3G034290Cucurbita maxima (Rimu)cmacucB0831
CsaV3_3G034290Cucurbita maxima (Rimu)cmacucB0966
CsaV3_3G034290Cucurbita maxima (Rimu)cmacucB1014
CsaV3_3G034290Cucurbita moschata (Rifu)cmocucB0270
CsaV3_3G034290Cucurbita pepo (Zucchini)cpecucB1057
CsaV3_3G034290Cucurbita moschata (Rifu)cmocucB0329
CsaV3_3G034290Cucurbita moschata (Rifu)cmocucB0537
CsaV3_3G034290Cucurbita moschata (Rifu)cmocucB0768
CsaV3_3G034290Cucurbita moschata (Rifu)cmocucB0816
CsaV3_3G034290Cucurbita moschata (Rifu)cmocucB0954
CsaV3_3G034290Cucurbita moschata (Rifu)cmocucB0997
CsaV3_3G034290Cucurbita pepo (Zucchini)cpecucB0073
CsaV3_3G034290Cucurbita pepo (Zucchini)cpecucB0197
CsaV3_3G034290Cucurbita pepo (Zucchini)cpecucB0487
CsaV3_3G034290Cucurbita pepo (Zucchini)cpecucB0594
CsaV3_3G034290Cucurbita pepo (Zucchini)cpecucB0747
CsaV3_3G034290Wild cucumber (PI 183967)cpicucB032
CsaV3_3G034290Wild cucumber (PI 183967)cpicucB144
CsaV3_3G034290Wild cucumber (PI 183967)cpicucB209
CsaV3_3G034290Wild cucumber (PI 183967)cpicucB343
CsaV3_3G034290Bottle gourd (USVL1VR-Ls)cuclsiB186
CsaV3_3G034290Bottle gourd (USVL1VR-Ls)cuclsiB193
CsaV3_3G034290Bottle gourd (USVL1VR-Ls)cuclsiB201
CsaV3_3G034290Bottle gourd (USVL1VR-Ls)cuclsiB203
CsaV3_3G034290Melon (DHL92) v3.5.1cucmeB183
CsaV3_3G034290Melon (DHL92) v3.5.1cucmeB202
CsaV3_3G034290Melon (DHL92) v3.5.1cucmeB218
CsaV3_3G034290Melon (DHL92) v3.5.1cucmeB262
CsaV3_3G034290Melon (DHL92) v3.6.1cucmedB174
CsaV3_3G034290Melon (DHL92) v3.6.1cucmedB194
CsaV3_3G034290Melon (DHL92) v3.6.1cucmedB211
CsaV3_3G034290Melon (DHL92) v3.6.1cucmedB257
CsaV3_3G034290Watermelon (Charleston Gray)cucwcgB221
CsaV3_3G034290Watermelon (Charleston Gray)cucwcgB199
CsaV3_3G034290Watermelon (Charleston Gray)cucwcgB203
CsaV3_3G034290Watermelon (Charleston Gray)cucwcgB224
CsaV3_3G034290Watermelon (97103) v1cucwmB208
CsaV3_3G034290Watermelon (97103) v1cucwmB221
CsaV3_3G034290Watermelon (97103) v1cucwmB275
CsaV3_3G034290Watermelon (97103) v1cucwmB284
CsaV3_3G034290Watermelon (97103) v2cucwmbB187
CsaV3_3G034290Watermelon (97103) v2cucwmbB193
CsaV3_3G034290Watermelon (97103) v2cucwmbB202
CsaV3_3G034290Watermelon (97103) v2cucwmbB205
CsaV3_3G034290Wax gourdcucwgoB224
CsaV3_3G034290Wax gourdcucwgoB321
CsaV3_3G034290Wax gourdcucwgoB335
CsaV3_3G034290Wax gourdcucwgoB339