CsaV3_3G034020 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACGTGCAGAGCTGTGTATTGAATCCTTTTTCTTTTTTGAATTTGTTCCCTTTTGTTTTGGGGTTTCGGTTTCGGGTCATAACAAAACTATCTTTTCGGCCGAAGCTGTATTACTCATTGGTGAAACAGAAGAAGGAATCTGGAGAAGAAAGTATCATCCAGGTTAAACTAACTATTTCAATCTACTAATATCTTCTCTTTTTCCCACTGTTTATCGTATCACATGTTCAATCATTAATTATTACATTTTTAGATGTTTTCACTTTTCTAAGAGTTTTCAAGAATACACCATGTTCATCACCACTTTTCAAAACATATCATTTTGACTTTTTTTTTAGTTCCTAAAATTCTCACCAAGAATATGTGTTTCATTCCTGAATTTTCAAATTTTCGTTATTCGATAGATCAAAAAAACCAAATAAAAAGTAATCAAATTGACCGATTGACTAAGAGTTTATTTGTACTCTTTTATGGTTGGAATTGGTTGAACATTTAGTAAACCGATCATAGCCGATTCGGTGGTACTTTGGTTGGAAAATAAAATCAGTGCCCTACCTCTAATATATTTAAAATAATAATAATAATAAATTTATATATTGAAAATTTAAGGACAAGTTGTATATATTCTTAATTTTAATTCAAATAAATACAGTACATATATTTAAGAAATTGAAAAAAGAGATTTGTGAAATTTTAGGTTGAAAATGTAATTTTCTCTTTTCAATTAGGGTTCCATTTTGAGAAGCTCTCAACTTTCAATCTGGTTCTCCATATTTTTTGTTATTATGTTTTTAATAGCTATTTAAAACACAATTTGATTTAAACTTCATCACAAAACACAATTTCAATACCTTCTACTTTATTTTCATCACTTCATTATCATCATCATATCACAAAATGATGAATCTTGTCCAACCTAAGACATTATTATTTTGGCAGTCCAAATTAAAACATTATTAAATCAACGTGTTTGAAACGAGAATTTAAATTAATCCAAACAAATTAAATGGGTGGTTATTACTTATTATGAGTAGTGGATTTTTTAAAAAAAGTTTGAGAAAAGCATATCTCTCGTCAGGCACTGCGTTACAGCTTGTCTATTATCTCCACTACTAATGCTTCTTCTTCTTCTTCTTCTTCCTTCTTCCTCTTCCTGATTTTGTGGATTTGATGAAAATGGCAGACATTGGAAAACCAATAGGATTCTGTTGGAAATGTGTTTCTCTCCACATTTTACGCTATTTTTCTTTTATTAAATATTTCCCCCCCTTTTTTTTCACTATCTTCAAACATAAATAAAATATAGCTTTATTAAAGGTAAGAAGAAATTTATTATTAATTTAATTCAGTAAAGAGAAACTTCAGTGGTTATTAACTAAAGATCCTATATGGAAGTTGATAATCTTAATTCTATTTCTTCAAAAGTCAAACATATCAACAAACGTATCTCTTTTCTCTTTTTTTAATTTATAACTTCAATATTTTATTGCTCTCTTCGTCTCTCAGTTCTTCAAAGAATTAAGAATGTGGGATTCTCCATGGAAAGTTGTTGGGGGTTTAATCCTTTTGGGCGTGAGTCGACGTGAGCCCAAATCCGAAAGCTTGCAAATGAATCTATTTGGGCCTAGAAATGCGATTTGTGCCCAAAAATTGGCCCATCTTAGGTGGGATTCATATTATACACACCCAGGCTATTTCGGCTTTTCTCTTCAAATTTTTTTTTATGAACAATCTATTTCTTTTGCTTCCAATAAATTTTAAAATTAGTACTTCGAAATCAATTTTTCCCCTCTTTCAATAGATAATGTGTTGTTTTCATGTACCTATTCGTCGTCGATGGGTAGGTTGTATTTTTTAAGATTTATCAACTGAACATATACTGAATTTTGACGTTTAAAAGAAAGACTCCAAACAATTTTTTTTAAAAAAATTTGAGTCTGTATTGACTTATATAATTAATTTGAAATTAGAATTAGACGACATTAAATATTGTTAATTATCTTGGTTAATATTGTGTGGGCAGTGGGTGTTCTGGGCAGGGTCGTTGATCGAGGCAGCACTTGCAGCTTTGTACCATCAAACGGTGATAAGGGCAATTCCATTTAAGTCCAAATGA ATGCACGTGCAGAGCTGTGTATTGAATCCTTTTTCTTTTTTGAATTTGTTCCCTTTTGTTTTGGGGTTTCGGTTTCGGGTCATAACAAAACTATCTTTTCGGCCGAAGCTGTATTACTCATTGGTGAAACAGAAGAAGGAATCTGGAGAAGAAAGTATCATCCAGTTCTTCAAAGAATTAAGAATGTGGGATTCTCCATGGAAAGTTGTTGGGGGTTTAATCCTTTTGGGCTGGGTGTTCTGGGCAGGGTCGTTGATCGAGGCAGCACTTGCAGCTTTGTACCATCAAACGGTGATAAGGGCAATTCCATTTAAGTCCAAATGA ATGCACGTGCAGAGCTGTGTATTGAATCCTTTTTCTTTTTTGAATTTGTTCCCTTTTGTTTTGGGGTTTCGGTTTCGGGTCATAACAAAACTATCTTTTCGGCCGAAGCTGTATTACTCATTGGTGAAACAGAAGAAGGAATCTGGAGAAGAAAGTATCATCCAGTTCTTCAAAGAATTAAGAATGTGGGATTCTCCATGGAAAGTTGTTGGGGGTTTAATCCTTTTGGGCTGGGTGTTCTGGGCAGGGTCGTTGATCGAGGCAGCACTTGCAGCTTTGTACCATCAAACGGTGATAAGGGCAATTCCATTTAAGTCCAAATGA MHVQSCVLNPFSFLNLFPFVLGFRFRVITKLSFRPKLYYSLVKQKKESGEESIIQFFKELRMWDSPWKVVGGLILLGWVFWAGSLIEAALAALYHQTVIRAIPFKSK
BLAST of CsaV3_3G034020 vs. NCBI nr
Match: KGN58780.1 (hypothetical protein Csa_3G731895 [Cucumis sativus]) HSP 1 Score: 218.0 bits (554), Expect = 1.6e-53 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. NCBI nr
Match: XP_022950382.1 (aquaporin PIP1-1-like [Cucurbita moschata]) HSP 1 Score: 58.9 bits (141), Expect = 1.2e-05 Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. NCBI nr
Match: XP_022971414.1 (aquaporin PIP1-1-like [Cucurbita maxima]) HSP 1 Score: 58.9 bits (141), Expect = 1.2e-05 Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. NCBI nr
Match: XP_023539371.1 (aquaporin PIP1-2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 58.9 bits (141), Expect = 1.2e-05 Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. NCBI nr
Match: XP_022145702.1 (probable aquaporin PIP1-2 [Momordica charantia]) HSP 1 Score: 57.8 bits (138), Expect = 2.7e-05 Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. TAIR10
Match: AT4G23400.1 (plasma membrane intrinsic protein 1;5) HSP 1 Score: 54.3 bits (129), Expect = 5.4e-08 Identity = 24/30 (80.00%), Postives = 25/30 (83.33%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. TAIR10
Match: AT4G00430.1 (plasma membrane intrinsic protein 1;4) HSP 1 Score: 54.3 bits (129), Expect = 5.4e-08 Identity = 24/30 (80.00%), Postives = 25/30 (83.33%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. TAIR10
Match: AT1G01620.1 (plasma membrane intrinsic protein 1C) HSP 1 Score: 53.1 bits (126), Expect = 1.2e-07 Identity = 23/30 (76.67%), Postives = 25/30 (83.33%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. TAIR10
Match: AT3G61430.1 (plasma membrane intrinsic protein 1A) HSP 1 Score: 51.2 bits (121), Expect = 4.6e-07 Identity = 23/30 (76.67%), Postives = 24/30 (80.00%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. Swiss-Prot
Match: sp|P25794|PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum OX=3888 GN=TRG-31 PE=2 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 7.5e-07 Identity = 24/30 (80.00%), Postives = 25/30 (83.33%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. Swiss-Prot
Match: sp|Q39196|PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana OX=3702 GN=PIP1.4 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 9.8e-07 Identity = 24/30 (80.00%), Postives = 25/30 (83.33%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. Swiss-Prot
Match: sp|Q8LAA6|PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana OX=3702 GN=PIP1-5 PE=1 SV=2) HSP 1 Score: 54.3 bits (129), Expect = 9.8e-07 Identity = 24/30 (80.00%), Postives = 25/30 (83.33%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. Swiss-Prot
Match: sp|Q08733|PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana OX=3702 GN=PIP1-3 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 2.2e-06 Identity = 23/30 (76.67%), Postives = 25/30 (83.33%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. Swiss-Prot
Match: sp|Q7XSQ9|PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PIP1-2 PE=2 SV=3) HSP 1 Score: 52.8 bits (125), Expect = 2.8e-06 Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. TrEMBL
Match: tr|A0A0A0L9Y0|A0A0A0L9Y0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G731895 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.0e-53 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. TrEMBL
Match: tr|A0A2P5PVH2|A0A2P5PVH2_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA23523 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 6.8e-05 Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. TrEMBL
Match: tr|V4S571|V4S571_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10012384mg PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 6.8e-05 Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. TrEMBL
Match: tr|A0A2H5PE69|A0A2H5PE69_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_128510 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 6.8e-05 Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0
BLAST of CsaV3_3G034020 vs. TrEMBL
Match: tr|A0A0B0N9B0|A0A0B0N9B0_GOSAR (Putative aquaporin PIP1-2 OS=Gossypium arboreum OX=29729 GN=F383_04574 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 6.8e-05 Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |