CsaV3_3G031250 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G031250
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 26996057 .. 26996212 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAATGAAGGAGGAATTCAAAGAGATGGTGGTGAAGAGCATAACGTTAAAAAGACAAAGGTGGTGGTGAGGGTTGGGCACGACAAGCACGAGGGTTGTGATGGTGATGGTGGCGGCAACGGCTGTTTGAAGAAGAGAGGAAGAGCAGTGTGA

mRNA sequence

ATGAAAAATGAAGGAGGAATTCAAAGAGATGGTGGTGAAGAGCATAACGTTAAAAAGACAAAGGTGGTGGTGAGGGTTGGGCACGACAAGCACGAGGGTTGTGATGGTGATGGTGGCGGCAACGGCTGTTTGAAGAAGAGAGGAAGAGCAGTGTGA

Coding sequence (CDS)

ATGAAAAATGAAGGAGGAATTCAAAGAGATGGTGGTGAAGAGCATAACGTTAAAAAGACAAAGGTGGTGGTGAGGGTTGGGCACGACAAGCACGAGGGTTGTGATGGTGATGGTGGCGGCAACGGCTGTTTGAAGAAGAGAGGAAGAGCAGTGTGA

Protein sequence

MKNEGGIQRDGGEEHNVKKTKVVVRVGHDKHEGCDGDGGGNGCLKKRGRAV
BLAST of CsaV3_3G031250 vs. NCBI nr
Match: KGN58494.1 (hypothetical protein Csa_3G651790 [Cucumis sativus])

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-21
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0

Query: 1  MKNEGGIQRDGGEEHNVKKTKVVVRVGHDKHEGCDGDGGGNGCLKKRGRAV 52
          MKNEGGIQRDGGEEHNVKKTKVVVRVGHDKHEGCDGDGGGNGCLKKRGRAV
Sbjct: 1  MKNEGGIQRDGGEEHNVKKTKVVVRVGHDKHEGCDGDGGGNGCLKKRGRAV 51

BLAST of CsaV3_3G031250 vs. TrEMBL
Match: tr|A0A0A0LC55|A0A0A0LC55_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G651790 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 8.6e-22
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0

Query: 1  MKNEGGIQRDGGEEHNVKKTKVVVRVGHDKHEGCDGDGGGNGCLKKRGRAV 52
          MKNEGGIQRDGGEEHNVKKTKVVVRVGHDKHEGCDGDGGGNGCLKKRGRAV
Sbjct: 1  MKNEGGIQRDGGEEHNVKKTKVVVRVGHDKHEGCDGDGGGNGCLKKRGRAV 51

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN58494.11.3e-21100.00hypothetical protein Csa_3G651790 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LC55|A0A0A0LC55_CUCSA8.6e-22100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G651790 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G031250.1CsaV3_3G031250.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..51

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None