CsaV3_3G030720 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAGCAATTAAAATTGACATTTAAAAATAATTTAAAGGATATGACACGTGTCTCAGTTAATTCAAAAAAATTAACCGTTACAAAAAGGATAATTATGGGTAAATCAACGGGAAATTGTTCCCTTGCTGGCTAATAAAAACTCAACGGTCAGGATTTAATCACGGCAAAATGGATGCCTATGAAGATTACACTACAGTTCACCCCTTTAAAACATCACTCAATCATTGCCTCTTCTCTCTCTCCCTCAAATTTGATCTTCATAACTAAAAGAAAAATATATTTCTCTTTTCTTTCCCATACTGCCTTGGATTATCTCCCCAATTATTGGGAAGAGAAAGGTTTTGGGTTTTTCTTTGATTGTTCAAACAAAGAAACTACAAACTGGATCTAATTTGAGTTTCTTTCTTTGCCTTCTTCCAATCGAGTTTAATCCTTTTCAAATGGTTTTCATGTCTGATTTTCGATTTACAGACAAAGATTCTGAGGAAGAAGCTGGAGAGTGGGAAAGGGAAACATAAATTCAATCACCATTCAATAAAATTCCCCAAGGTAATAATCTTTTTTCTCTTTTTTTTTTTTTATTTTATCCTAAATTTCTCAAATGGTTGGGATTTCTCTGTTTCTGAAACAGAACAGAGCAATTTCTAAATCTTCTTCTTTTGTAAATGTCAGCGACTTTAATCACAGAATCAATGGCGGCTATATCACCCCCAGTGCCGGAAAATCGTGCAGCGGCGGTGCTGATTGGGCAAATGGATGTTGAATTTGCCAAGTGTGAGTGTTGTGGGCTGACAGAGGAATGTACAGGGGCCTATATCGAGGGAATCCGCCGCCGGTTCGACGGAAAATGGATTTGCGGTTTGTGTTCGGAGGCGGTTCAAGATGAGATTCTTAAGTCCCATGAAATTATCACCACCGAAGAAGCCATAGCAAAGCATATGAATTTTCGTAAGAAATTTGCTGCCGCCATCGGACCACCGCCGGACCCGACGCCTCATCTCATAACTGCTATGAGACAGATCCTCCGTCGGAGTTTAGATTCCCCAAGAGCATTGAGGTCTAGCCCGGCCACTCCAAGCACCGCTGCCGACAACCAAATCCGCCGCCGGGCTCTTGCTTGATCTGGCAGCTGCTTCATTTCGACGATGAACATTGGATTTTTCCAGAGAATGAAAGAATTTTTCCAAACAAATAAATTGGGATAAAAATCTCCTCCCCCCAAAAAATAAAACATGAAATAGAGAAAATAATGTTTTATCTTTGATGCTCAATGTCGAATATAATTTTCTTCTTCTCTTGCTTTCGATTTGCTTTTCCTTTTTGGAAATTTATTTGAGAAGAGGAAGAAATTGAAAATTATAAAAATGGGGTTGGGGAATTTGTTGGAATGGGTGACCTAACAGAATCAATTATTGAGTTTGAATATGATATGTTAATTAAATTCAATCAGATTAAAGGGTGTGCAGGTTACAGTTGGTGAGTGTTTAATGGAGCTTTGTGAAATAGTGGAATTTTATTTGGAAGTGAGTTTTATCCAATGTCGAAAAGGGAATGAGTAGCATTAATCTTGATTTGTAATTGTTACACACAAATTATTATTACCTTTTTTAGCAGCAATCAACTAGCTATACTCACTTTGAGTATCTAATGGATCTTCATAAAATAGGAG ATGGCGGCTATATCACCCCCAGTGCCGGAAAATCGTGCAGCGGCGGTGCTGATTGGGCAAATGGATGTTGAATTTGCCAAGTGTGAGTGTTGTGGGCTGACAGAGGAATGTACAGGGGCCTATATCGAGGGAATCCGCCGCCGGTTCGACGGAAAATGGATTTGCGGTTTGTGTTCGGAGGCGGTTCAAGATGAGATTCTTAAGTCCCATGAAATTATCACCACCGAAGAAGCCATAGCAAAGCATATGAATTTTCGTAAGAAATTTGCTGCCGCCATCGGACCACCGCCGGACCCGACGCCTCATCTCATAACTGCTATGAGACAGATCCTCCGTCGGAGTTTAGATTCCCCAAGAGCATTGAGGTCTAGCCCGGCCACTCCAAGCACCGCTGCCGACAACCAAATCCGCCGCCGGGCTCTTGCTTGA ATGGCGGCTATATCACCCCCAGTGCCGGAAAATCGTGCAGCGGCGGTGCTGATTGGGCAAATGGATGTTGAATTTGCCAAGTGTGAGTGTTGTGGGCTGACAGAGGAATGTACAGGGGCCTATATCGAGGGAATCCGCCGCCGGTTCGACGGAAAATGGATTTGCGGTTTGTGTTCGGAGGCGGTTCAAGATGAGATTCTTAAGTCCCATGAAATTATCACCACCGAAGAAGCCATAGCAAAGCATATGAATTTTCGTAAGAAATTTGCTGCCGCCATCGGACCACCGCCGGACCCGACGCCTCATCTCATAACTGCTATGAGACAGATCCTCCGTCGGAGTTTAGATTCCCCAAGAGCATTGAGGTCTAGCCCGGCCACTCCAAGCACCGCTGCCGACAACCAAATCCGCCGCCGGGCTCTTGCTTGA MAAISPPVPENRAAAVLIGQMDVEFAKCECCGLTEECTGAYIEGIRRRFDGKWICGLCSEAVQDEILKSHEIITTEEAIAKHMNFRKKFAAAIGPPPDPTPHLITAMRQILRRSLDSPRALRSSPATPSTAADNQIRRRALA
BLAST of CsaV3_3G030720 vs. NCBI nr
Match: KGN58440.1 (hypothetical protein Csa_3G644790 [Cucumis sativus]) HSP 1 Score: 288.5 bits (737), Expect = 1.2e-74 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of CsaV3_3G030720 vs. NCBI nr
Match: XP_023523768.1 (uncharacterized protein LOC111787904 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 195.7 bits (496), Expect = 1.1e-46 Identity = 100/128 (78.12%), Postives = 111/128 (86.72%), Query Frame = 0
BLAST of CsaV3_3G030720 vs. NCBI nr
Match: PON83580.1 (hypothetical protein TorRG33x02_206320 [Trema orientalis]) HSP 1 Score: 183.0 bits (463), Expect = 7.4e-43 Identity = 86/134 (64.18%), Postives = 109/134 (81.34%), Query Frame = 0
BLAST of CsaV3_3G030720 vs. NCBI nr
Match: XP_017978048.1 (PREDICTED: uncharacterized protein LOC18596242 [Theobroma cacao] >EOY27280.1 Uncharacterized protein TCM_029159 [Theobroma cacao]) HSP 1 Score: 181.4 bits (459), Expect = 2.1e-42 Identity = 85/127 (66.93%), Postives = 106/127 (83.46%), Query Frame = 0
BLAST of CsaV3_3G030720 vs. NCBI nr
Match: XP_021294398.1 (uncharacterized protein LOC110424195 [Herrania umbratica]) HSP 1 Score: 181.4 bits (459), Expect = 2.1e-42 Identity = 85/127 (66.93%), Postives = 106/127 (83.46%), Query Frame = 0
BLAST of CsaV3_3G030720 vs. TAIR10
Match: AT1G72510.1 (Protein of unknown function (DUF1677)) HSP 1 Score: 146.0 bits (367), Expect = 1.8e-35 Identity = 66/102 (64.71%), Postives = 85/102 (83.33%), Query Frame = 0
BLAST of CsaV3_3G030720 vs. TAIR10
Match: AT2G09970.1 (Protein of unknown function (DUF1677)) HSP 1 Score: 124.4 bits (311), Expect = 5.6e-29 Identity = 61/113 (53.98%), Postives = 83/113 (73.45%), Query Frame = 0
BLAST of CsaV3_3G030720 vs. TAIR10
Match: AT3G22540.1 (Protein of unknown function (DUF1677)) HSP 1 Score: 94.4 bits (233), Expect = 6.2e-20 Identity = 42/93 (45.16%), Postives = 61/93 (65.59%), Query Frame = 0
BLAST of CsaV3_3G030720 vs. TAIR10
Match: AT4G14819.1 (Protein of unknown function (DUF1677)) HSP 1 Score: 92.4 bits (228), Expect = 2.4e-19 Identity = 45/93 (48.39%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of CsaV3_3G030720 vs. TAIR10
Match: AT5G20670.1 (Protein of unknown function (DUF1677)) HSP 1 Score: 91.3 bits (225), Expect = 5.3e-19 Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = 0
BLAST of CsaV3_3G030720 vs. TrEMBL
Match: tr|A0A0A0L915|A0A0A0L915_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G644790 PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 8.2e-75 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of CsaV3_3G030720 vs. TrEMBL
Match: tr|A0A2P5EDI2|A0A2P5EDI2_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_206320 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 4.9e-43 Identity = 86/134 (64.18%), Postives = 109/134 (81.34%), Query Frame = 0
BLAST of CsaV3_3G030720 vs. TrEMBL
Match: tr|A0A061GBP7|A0A061GBP7_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_029159 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.4e-42 Identity = 85/127 (66.93%), Postives = 106/127 (83.46%), Query Frame = 0
BLAST of CsaV3_3G030720 vs. TrEMBL
Match: tr|A0A2P5ACJ3|A0A2P5ACJ3_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_345940 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 1.4e-42 Identity = 87/140 (62.14%), Postives = 109/140 (77.86%), Query Frame = 0
BLAST of CsaV3_3G030720 vs. TrEMBL
Match: tr|W9S9H8|W9S9H8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_008168 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 7.0e-42 Identity = 87/135 (64.44%), Postives = 108/135 (80.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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