CsaV3_3G030700 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G030700
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 26508937 .. 26509164 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTCGTGGCATAAGGCTTCTGCAAGGTCATGTCGCGGAAGCCGTCTACAACGTTATGCAATGTACGCCGAGGAAATTTTTTCTATCGTTGATGTGAGCTGCTTCGGGGAAATTGGTATCCCCGTTGTGTTTTCTGTGATGTGTCTGTCAACATCGTCCGCGACGTCGCAGCAACCTTCTCCGACGTTGGTTAGGGTTTCTGATAACGTATTGCTACGCCTTTAA

mRNA sequence

ATGTGTTCGTGGCATAAGGCTTCTGCAAGGTCATGTCGCGGAAGCCGTCTACAACGTTATGCAATGTACGCCGAGGAAATTTTTTCTATCGTTGATGTGAGCTGCTTCGGGGAAATTGGTATCCCCGTTGTGTTTTCTGTGATGTGTCTGTCAACATCGTCCGCGACGTCGCAGCAACCTTCTCCGACGTTGGTTAGGGTTTCTGATAACGTATTGCTACGCCTTTAA

Coding sequence (CDS)

ATGTGTTCGTGGCATAAGGCTTCTGCAAGGTCATGTCGCGGAAGCCGTCTACAACGTTATGCAATGTACGCCGAGGAAATTTTTTCTATCGTTGATGTGAGCTGCTTCGGGGAAATTGGTATCCCCGTTGTGTTTTCTGTGATGTGTCTGTCAACATCGTCCGCGACGTCGCAGCAACCTTCTCCGACGTTGGTTAGGGTTTCTGATAACGTATTGCTACGCCTTTAA

Protein sequence

MCSWHKASARSCRGSRLQRYAMYAEEIFSIVDVSCFGEIGIPVVFSVMCLSTSSATSQQPSPTLVRVSDNVLLRL
BLAST of CsaV3_3G030700 vs. NCBI nr
Match: KGN58438.1 (hypothetical protein Csa_3G644770 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 3.7e-33
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0

Query: 1  MCSWHKASARSCRGSRLQRYAMYAEEIFSIVDVSCFGEIGIPVVFSVMCLSTSSATSQQP 60
          MCSWHKASARSCRGSRLQRYAMYAEEIFSIVDVSCFGEIGIPVVFSVMCLSTSSATSQQP
Sbjct: 1  MCSWHKASARSCRGSRLQRYAMYAEEIFSIVDVSCFGEIGIPVVFSVMCLSTSSATSQQP 60

Query: 61 SPTLVRVSDNVLLRL 76
          SPTLVRVSDNVLLRL
Sbjct: 61 SPTLVRVSDNVLLRL 75

BLAST of CsaV3_3G030700 vs. TrEMBL
Match: tr|A0A0A0L9C3|A0A0A0L9C3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G644770 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.4e-33
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0

Query: 1  MCSWHKASARSCRGSRLQRYAMYAEEIFSIVDVSCFGEIGIPVVFSVMCLSTSSATSQQP 60
          MCSWHKASARSCRGSRLQRYAMYAEEIFSIVDVSCFGEIGIPVVFSVMCLSTSSATSQQP
Sbjct: 1  MCSWHKASARSCRGSRLQRYAMYAEEIFSIVDVSCFGEIGIPVVFSVMCLSTSSATSQQP 60

Query: 61 SPTLVRVSDNVLLRL 76
          SPTLVRVSDNVLLRL
Sbjct: 61 SPTLVRVSDNVLLRL 75

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN58438.13.7e-33100.00hypothetical protein Csa_3G644770 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L9C3|A0A0A0L9C3_CUCSA2.4e-33100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G644770 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G030700.1CsaV3_3G030700.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None