CsaV3_3G028060 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G028060
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Cyclic nucleotide-gated ion channel 1
Location	chr3 : 24499080 .. 24501020 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATACAAATGATCATCAAGAAGTACCTTCAAACTTCAATTCTTAACATTGACAACATGAAATGTGCAGATTATCCTTGTAGTAGTCTTTACAAGTAAGAAAGGTATCAAATATTTCGAAAACAAGTGGCGACTGATCTATCTGCCCCTCTTCCAATTTGTCCCAAGAATCATCCGAATCTATGTGTTATGTAAGAAGCTTTCCAGGAGTGCTGCTCCTAATGACATAACAGTAACCGGGAAGTTCAGAGGCACATTCAATTTCCTTCTCTTCATTCTTGCCAGTCATGTATGTTTCTTTACCTTCCGTTTATAAAAAATGGAGATTTAGTGTTTTAATGTTCTGAATGATCGTATTTGTTTTGAAGCTGTTGTATTTTTTTCGTTTGTGAAGGTGGTTGGAGCATTTTGGTACTGCTTCTCAGTTCTAAGAGAACTGTATTGCTGGCAAAGTGCATGCAAATTTAACAGTGGATGCAAGGTGAATTCATTTTCTTGTGAGGATATCACAAGCAATGAACGGTTTGTTGATAATTTTTGCCCTATCAATCCACCTAATCCAGCAATATTCGATTTTGGTTTATTTCTTAACGCCCATCAATCTGGTGTCACGAGGGTAAATGATTTTCCCGTAAAGTTATTATGCTGCTTCTTTTGGGGACTACGTGCATTAAGGTTTGAAACTTTTCCTTCTCAACACATCTCTGTTTCTTCTTCATTTTAAATGGCTATTACCTTAAGCATCGACTATTGGTTTGAGTATATGTTTTTTACGAGGACAATAATCTACAACTCAACTTAGAACTAGATCAAATGGTCGTCTGAGTTTACAAGTTCAATAATCTCATTATATTTTTTTCCTCTGTATGTGTTGGTCTTCATCATCAAAACGTAGTCTGAGCAAATACGGGGAGAGAAAAATTAGACTTAAAGCATTCCAAGTTTGAGATTATGTTAGATCTGTTAGACCACCACCAATCCATGCTGGTTAAATGATAATGTTCTCGAGTATGAGTACCTTTCGAATATATAATTTTTAAACGATAACTCGAAGTAACTCTTCTTTGTTGAAATTATGAGATCACTTTTCAACTTCCAGAACTCTCATCTGGTACAAATAATTTCCTTGTTTAGAAGAGATTGAAATGTGATAGTATCATCTCATGTTTGGTCGAATTCAATTTGCAGCTCATTTGGGTCCAACCTGACTACAAGTAGCTATGCATGCGAAAACATCTTTGCGGCTCTCGTTAGCATTGCTGGGATACTTCTAGTTGTTTATCTTATCGGCAACTTGCAGGTTTGTTAAAGATCTTCTCATCGAATATGTAAACCTCTCCTTTTCTAAATGAGTAACAAAGAAATGGGTGCATCATTAAACAAGTATATCTGCGATCCTCGACTTTAAGATTAGAGGAGAAAAGGAGGACGATGCAAAAGAAAGATGGTGAAATAGATTTTTGGATAGATTATTATAAATTTCAGAAGAAGAAGGAAATCAAGGAGTTTGTGAGAGACAAGTTTGGGTGGAAAAATGATGTCAATTTAAAAACACTGCTCGACGTGTTTTCGTCTCCATTCGTTGAGGAGATAAAGAAAGAACTTTGCTGCAATATCCTAAAGAGGGTGAGTTTTGCTTGGTACATTTGTTAAGTAAATTGTTCGAATAGAAACAAATGACCTTGATCAATGTTTCATTGGCAGGTTCCAATGCTTAAAGAATTTGAAGAGGAGAAGTTAGAAGAGATGATGAAGGATATGAAGCTAATGATTTTTGCAGAGCATAACTATATTATTCAAGAGGGGGAGCTTGTTGAGCAGATGCTATTATTCACGAAAGGTATGGGATTGAAATTTAGCAAGAGCATTGGAGCTAGAACAACGATTAGCACGTTTGGAAAAGGTGATTTGTTTGGGGAGCAGCTACTGATTGGGCAGTGA

mRNA sequence

ATGATACAAATGATCATCAAGAAGTACCTTCAAACTTCAATTCTTAACATTGACAACATGAAATGTGCAGATTATCCTTGTAGTAGTCTTTACAAGAGTGCTGCTCCTAATGACATAACAGTAACCGGGAAGTTCAGAGGCACATTCAATTTCCTTCTCTTCATTCTTGCCAGTCATGTGGTTGGAGCATTTTGGTACTGCTTCTCAGTTCTAAGAGAACTGTATTGCTGGCAAAGTGCATGCAAATTTAACAGTGGATGCAAGGTGAATTCATTTTCTTGTGAGGATATCACAAGCAATGAACGGTTTGTTGATAATTTTTGCCCTATCAATCCACCTAATCCAGCAATATTCGATTTTGGTTTATTTCTTAACGCCCATCAATCTGGTGTCACGAGGGTAAATGATTTTCCCGTAAAGTTATTATGCTGCTTCTTTTGGGGACTACGTGCATTAAGCTCATTTGGGTCCAACCTGACTACAAGTAGCTATGCATGCGAAAACATCTTTGCGGCTCTCGTTAGCATTGCTGGGATACTTCTAGTTGTTTATCTTATCGGCAACTTGCAGAAGAAGAAGGAAATCAAGGAGTTTGTGAGAGACAAGTTTGGGTGGAAAAATGATGTCAATTTAAAAACACTGCTCGACGTGTTTTCGTCTCCATTCGTTGAGGAGATAAAGAAAGAACTTTGCTGCAATATCCTAAAGAGGGTTCCAATGCTTAAAGAATTTGAAGAGGAGAAGTTAGAAGAGATGATGAAGGATATGAAGCTAATGATTTTTGCAGAGCATAACTATATTATTCAAGAGGGGGAGCTTGTTGAGCAGATGCTATTATTCACGAAAGGTATGGGATTGAAATTTAGCAAGAGCATTGGAGCTAGAACAACGATTAGCACGTTTGGAAAAGGTGATTTGTTTGGGGAGCAGCTACTGATTGGGCAGTGA

Coding sequence (CDS)

ATGATACAAATGATCATCAAGAAGTACCTTCAAACTTCAATTCTTAACATTGACAACATGAAATGTGCAGATTATCCTTGTAGTAGTCTTTACAAGAGTGCTGCTCCTAATGACATAACAGTAACCGGGAAGTTCAGAGGCACATTCAATTTCCTTCTCTTCATTCTTGCCAGTCATGTGGTTGGAGCATTTTGGTACTGCTTCTCAGTTCTAAGAGAACTGTATTGCTGGCAAAGTGCATGCAAATTTAACAGTGGATGCAAGGTGAATTCATTTTCTTGTGAGGATATCACAAGCAATGAACGGTTTGTTGATAATTTTTGCCCTATCAATCCACCTAATCCAGCAATATTCGATTTTGGTTTATTTCTTAACGCCCATCAATCTGGTGTCACGAGGGTAAATGATTTTCCCGTAAAGTTATTATGCTGCTTCTTTTGGGGACTACGTGCATTAAGCTCATTTGGGTCCAACCTGACTACAAGTAGCTATGCATGCGAAAACATCTTTGCGGCTCTCGTTAGCATTGCTGGGATACTTCTAGTTGTTTATCTTATCGGCAACTTGCAGAAGAAGAAGGAAATCAAGGAGTTTGTGAGAGACAAGTTTGGGTGGAAAAATGATGTCAATTTAAAAACACTGCTCGACGTGTTTTCGTCTCCATTCGTTGAGGAGATAAAGAAAGAACTTTGCTGCAATATCCTAAAGAGGGTTCCAATGCTTAAAGAATTTGAAGAGGAGAAGTTAGAAGAGATGATGAAGGATATGAAGCTAATGATTTTTGCAGAGCATAACTATATTATTCAAGAGGGGGAGCTTGTTGAGCAGATGCTATTATTCACGAAAGGTATGGGATTGAAATTTAGCAAGAGCATTGGAGCTAGAACAACGATTAGCACGTTTGGAAAAGGTGATTTGTTTGGGGAGCAGCTACTGATTGGGCAGTGA

Protein sequence

MIQMIIKKYLQTSILNIDNMKCADYPCSSLYKSAAPNDITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSGCKVNSFSCEDITSNERFVDNFCPINPPNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFFWGLRALSSFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNLQKKKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIKKELCCNILKRVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLKFSKSIGARTTISTFGKGDLFGEQLLIGQ

Homology

[Close]

BLAST of CsaV3_3G028060 vs. NCBI nr
Match: KGN58279.1 (hypothetical protein Csa_3G606870 [Cucumis sativus])

HSP 1 Score: 628.6 bits (1620), Expect = 1.1e-176
Identity = 315/328 (96.04%), Postives = 315/328 (96.04%), Query Frame = 0


Query: 1   MIQMIIKKYLQTSILNIDNMKCADYPCSSLYK-------------SAAPNDITVTGKFRG 60
           MIQMIIKKYLQTSILNIDNMKCADYPCSSLYK             SAAPNDITVTGKFRG
Sbjct: 1   MIQMIIKKYLQTSILNIDNMKCADYPCSSLYKIIRIYVLCKKLSRSAAPNDITVTGKFRG 60

Query: 61  TFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSGCKVNSFSCEDITSNERFVDNF 120
           TFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSGCKVNSFSCEDITSNERFVDNF
Sbjct: 61  TFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSGCKVNSFSCEDITSNERFVDNF 120

Query: 121 CPINPPNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFFWGLRALSSFGSNLTTSSYACE 180
           CPINPPNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFFWGLRALSSFGSNLTTSSYACE
Sbjct: 121 CPINPPNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFFWGLRALSSFGSNLTTSSYACE 180

Query: 181 NIFAALVSIAGILLVVYLIGNLQKKKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIK 240
           NIFAALVSIAGILLVVYLIGNLQKKKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIK
Sbjct: 181 NIFAALVSIAGILLVVYLIGNLQKKKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIK 240

Query: 241 KELCCNILKRVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLK 300
           KELCCNILKRVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLK
Sbjct: 241 KELCCNILKRVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLK 300

Query: 301 FSKSIGARTTISTFGKGDLFGEQLLIGQ 316
           FSKSIGARTTISTFGKGDLFGEQLLIGQ
Sbjct: 301 FSKSIGARTTISTFGKGDLFGEQLLIGQ 328

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BLAST of CsaV3_3G028060 vs. NCBI nr
Match: XP_011651603.1 (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 451.8 bits (1161), Expect = 1.9e-123
Identity = 230/320 (71.88%), Postives = 252/320 (78.75%), Query Frame = 0


Query: 27  CSSLYKSAAPNDITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSG 86
           C  L +SAAPNDIT TG+FRGTFNF+LFI ASHV+GAFWYCF+VLRELYCWQ+ACKF+SG
Sbjct: 173 CKKLSRSAAPNDITGTGQFRGTFNFILFIFASHVLGAFWYCFAVLRELYCWQNACKFDSG 232

Query: 87  CKVNSFSCEDITSNERFVDNFCPINPPNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFF 146
           C+VNSF CEDIT N+ FVD FCPINPPNPAIFDFGLFL+AHQSG++R+N F  KLL CF 
Sbjct: 233 CRVNSFFCEDITGNDWFVDKFCPINPPNPAIFDFGLFLSAHQSGISRINGFNKKLLYCFS 292

Query: 147 WGLRALSSFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNL----------------- 206
           WGLR LSSFGSNLTTSSY  EN FAALV+I+GILLVVYLIGNL                 
Sbjct: 293 WGLRTLSSFGSNLTTSSYVWENFFAALVTISGILLVVYLIGNLQVYLQSSTLRSEEKRRT 352

Query: 207 -----------------QKKKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIKKELCC 266
                            QKKKEIKEFVR+KF WKNDVNL TLLDVF SPF EEIKKELC 
Sbjct: 353 MQKKDAEIDLWIDYYKFQKKKEIKEFVREKFEWKNDVNLITLLDVFPSPFAEEIKKELCW 412

Query: 267 NILKRVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLKFSKSI 313
           +ILKRVPMLKEFEEEKLEEMMKDMK +IFAE +YII+EGE +E MLLFTKGM L FSK  
Sbjct: 413 DILKRVPMLKEFEEEKLEEMMKDMKPIIFAEQSYIIREGEPIEHMLLFTKGMALTFSKRT 472

[Close]

BLAST of CsaV3_3G028060 vs. NCBI nr
Match: XP_011651604.1 (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis sativus])

HSP 1 Score: 451.8 bits (1161), Expect = 1.9e-123
Identity = 230/320 (71.88%), Postives = 252/320 (78.75%), Query Frame = 0


Query: 27  CSSLYKSAAPNDITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSG 86
           C  L +SAAPNDIT TG+FRGTFNF+LFI ASHV+GAFWYCF+VLRELYCWQ+ACKF+SG
Sbjct: 61  CKKLSRSAAPNDITGTGQFRGTFNFILFIFASHVLGAFWYCFAVLRELYCWQNACKFDSG 120

Query: 87  CKVNSFSCEDITSNERFVDNFCPINPPNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFF 146
           C+VNSF CEDIT N+ FVD FCPINPPNPAIFDFGLFL+AHQSG++R+N F  KLL CF 
Sbjct: 121 CRVNSFFCEDITGNDWFVDKFCPINPPNPAIFDFGLFLSAHQSGISRINGFNKKLLYCFS 180

Query: 147 WGLRALSSFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNL----------------- 206
           WGLR LSSFGSNLTTSSY  EN FAALV+I+GILLVVYLIGNL                 
Sbjct: 181 WGLRTLSSFGSNLTTSSYVWENFFAALVTISGILLVVYLIGNLQVYLQSSTLRSEEKRRT 240

Query: 207 -----------------QKKKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIKKELCC 266
                            QKKKEIKEFVR+KF WKNDVNL TLLDVF SPF EEIKKELC 
Sbjct: 241 MQKKDAEIDLWIDYYKFQKKKEIKEFVREKFEWKNDVNLITLLDVFPSPFAEEIKKELCW 300

Query: 267 NILKRVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLKFSKSI 313
           +ILKRVPMLKEFEEEKLEEMMKDMK +IFAE +YII+EGE +E MLLFTKGM L FSK  
Sbjct: 301 DILKRVPMLKEFEEEKLEEMMKDMKPIIFAEQSYIIREGEPIEHMLLFTKGMALTFSKRT 360

[Close]

BLAST of CsaV3_3G028060 vs. NCBI nr
Match: XP_016900693.1 (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 437.6 bits (1124), Expect = 3.7e-119
Identity = 226/316 (71.52%), Postives = 247/316 (78.16%), Query Frame = 0


Query: 27  CSSLYKSAAPNDITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSG 86
           C    +SAA NDIT T +FRG FNF+L I ASHVVG FWYCFS+L EL CW+SAC+FN G
Sbjct: 173 CKKFSRSAASNDITGTRQFRGIFNFVLLIFASHVVGGFWYCFSILTELNCWRSACEFNGG 232

Query: 87  CKVNSFSCEDITSNERFVDNFCPINPPNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFF 146
           C+VNSFSCEDIT NE+FVD +C INPP   IFDFGLFL AHQSG+TR+NDFP KLL CF 
Sbjct: 233 CRVNSFSCEDITGNEQFVDKYCLINPP---IFDFGLFLKAHQSGITRINDFPAKLLYCFS 292

Query: 147 WGLRALSSFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNL----------------- 206
           WGLRALSSFGSNLT SS++ ENIFAAL++I  ILLVVYLIGNL                 
Sbjct: 293 WGLRALSSFGSNLTPSSHSSENIFAALITIVEILLVVYLIGNLQSSTLRSEEKRRTMQKK 352

Query: 207 -------------QKKKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIKKELCCNILK 266
                        QKKKEIKEFVRDKF WKNDVNLKTLLDVFSSPFVEEIKKELC +ILK
Sbjct: 353 DVEIDLWIDYYNFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFSSPFVEEIKKELCWDILK 412

Query: 267 RVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLKFSKSIGART 313
           RV MLKEFEEEKL+EMMKDMK M+F E +YII+EGE VEQMLLFTKGMGL FSKS G RT
Sbjct: 413 RVLMLKEFEEEKLKEMMKDMKPMVFGEQSYIIREGEPVEQMLLFTKGMGLTFSKSTGTRT 472

[Close]

BLAST of CsaV3_3G028060 vs. NCBI nr
Match: XP_008449547.1 (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 436.0 bits (1120), Expect = 1.1e-118
Identity = 226/320 (70.62%), Postives = 247/320 (77.19%), Query Frame = 0


Query: 27  CSSLYKSAAPNDITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSG 86
           C    +SAA NDIT T +FRG FNF+L I ASHVVG FWYCFS+L EL CW+SAC+FN G
Sbjct: 173 CKKFSRSAASNDITGTRQFRGIFNFVLLIFASHVVGGFWYCFSILTELNCWRSACEFNGG 232

Query: 87  CKVNSFSCEDITSNERFVDNFCPINPPNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFF 146
           C+VNSFSCEDIT NE+FVD +C INPP   IFDFGLFL AHQSG+TR+NDFP KLL CF 
Sbjct: 233 CRVNSFSCEDITGNEQFVDKYCLINPP---IFDFGLFLKAHQSGITRINDFPAKLLYCFS 292

Query: 147 WGLRALSSFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNL----------------- 206
           WGLRALSSFGSNLT SS++ ENIFAAL++I  ILLVVYLIGNL                 
Sbjct: 293 WGLRALSSFGSNLTPSSHSSENIFAALITIVEILLVVYLIGNLQVYLQSSTLRSEEKRRT 352

Query: 207 -----------------QKKKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIKKELCC 266
                            QKKKEIKEFVRDKF WKNDVNLKTLLDVFSSPFVEEIKKELC 
Sbjct: 353 MQKKDVEIDLWIDYYNFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFSSPFVEEIKKELCW 412

Query: 267 NILKRVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLKFSKSI 313
           +ILKRV MLKEFEEEKL+EMMKDMK M+F E +YII+EGE VEQMLLFTKGMGL FSKS 
Sbjct: 413 DILKRVLMLKEFEEEKLKEMMKDMKPMVFGEQSYIIREGEPVEQMLLFTKGMGLTFSKST 472

[Close]

BLAST of CsaV3_3G028060 vs. TAIR10
Match: AT2G46430.1 (cyclic nucleotide gated channel 3)

HSP 1 Score: 161.8 bits (408), Expect = 7.0e-40
Identity = 97/295 (32.88%), Postives = 149/295 (50.51%), Query Frame = 0


Query: 39  ITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSGCKVNSFSCEDIT 98
           +T T       N  L++LASHV G+FWY  S+ R+  CW+ AC     C      C    
Sbjct: 239 VTETAWAGAALNLFLYMLASHVFGSFWYLISIERKDRCWREACAKIQNCTHAYLYCSPTG 298

Query: 99  SNER-FVDNFCPINPP----NPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFFWGLRALS 158
            + R F++  CP+  P    N  +F+FG+F +A QSGV    DFP K   CF+WGLR LS
Sbjct: 299 EDNRLFLNGSCPLIDPEEITNSTVFNFGIFADALQSGVVESRDFPKKFFYCFWWGLRNLS 358

Query: 159 SFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNLQK---------------------- 218
           + G NL TS++  E IFA ++ I+G++L   LIGN+QK                      
Sbjct: 359 ALGQNLKTSAFEGEIIFAIVICISGLVLFALLIGNMQKYLQSTTVRVEEMRVKRRDAEQW 418

Query: 219 ----------KKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIKKELCCNILKRVPML 278
                     +K I+++ + K+     V  + LL        ++IK+ LC  +LK+VP  
Sbjct: 419 MSHRMLPDDLRKRIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHLCLKLLKKVPWF 478

Query: 279 KEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLKFSKSIGART 297
           +  ++  L+ +   +K +++ E +YI++EGE VE ML   +G  L  + + G RT
Sbjct: 479 QAMDDRLLDALCARLKTVLYTEKSYIVREGEPVEDMLFIMRG-NLISTTTYGGRT 532

[Close]

BLAST of CsaV3_3G028060 vs. TAIR10
Match: AT5G53130.1 (cyclic nucleotide gated channel 1)

HSP 1 Score: 154.8 bits (390), Expect = 8.6e-38
Identity = 102/321 (31.78%), Postives = 149/321 (46.42%), Query Frame = 0


Query: 30  LYKSAAPND--ITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNS-G 89
           LYK        +T T      FN  L++LASHV GAFWY FS+ RE  CW+ AC+ N+  
Sbjct: 240 LYKEVTRTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETVCWKQACERNNPP 299

Query: 90  CKVNSFSCEDITS-NERFVDNFCPINPPNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCF 149
           C      C+  T+    F++  CPI  PN  +FDFG+FL+A QSGV    DFP K   CF
Sbjct: 300 CISKLLYCDPETAGGNAFLNESCPIQTPNTTLFDFGIFLDALQSGVVESQDFPQKFFYCF 359

Query: 150 FWGLRALSSFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNLQK-------------- 209
           +WGL+ LSS G NL TS+Y  E  FA  +SIAG++L  +LIGN+Q               
Sbjct: 360 WWGLQNLSSLGQNLKTSTYIWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRV 419

Query: 210 ------------------KKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIKKELCCN 269
                             +K I+ + + K+     V+ + LL                  
Sbjct: 420 KRRDAEQWMSHRLLPENLRKRIRRYEQYKWQETRGVDEENLLSXXXXXXXXXXXXXXXXX 479

Query: 270 ILKRVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLKFSKSIG 313
                                 ++ +++ E +YI++EG+ V++ML   +G  L  + + G
Sbjct: 480 XXXXXXXXXXXXXXXXXXXXXRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGG 539

[Close]

BLAST of CsaV3_3G028060 vs. TAIR10
Match: AT1G01340.2 (cyclic nucleotide gated channel 10)

HSP 1 Score: 153.7 bits (387), Expect = 1.9e-37
Identity = 93/282 (32.98%), Postives = 142/282 (50.35%), Query Frame = 0


Query: 39  ITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSGCKVNSFSCE-DI 98
           +T T      +N  L++LASHV GA WY  SV RE  CWQ AC+   GC +    CE D 
Sbjct: 235 VTETAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWQEACEKTKGCNMKFLYCENDR 294

Query: 99  TSNERFVDNFCPINPP----NPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFFWGLRALS 158
             +  F+   CP   P    N  IF+FG+F +A +SGV   +DF  K   CF+WGLR LS
Sbjct: 295 NVSNNFLTTSCPFLDPGDITNSTIFNFGIFTDALKSGVVESHDFWKKFFYCFWWGLRNLS 354

Query: 159 SFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNLQK---------------------- 218
           + G NL TS +  E IFA  + I+G++L   LIGN+QK                      
Sbjct: 355 ALGQNLQTSKFVGEIIFAISICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQW 414

Query: 219 ----------KKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIKKELCCNILKRVPML 278
                     +K I+ + + ++     V  +TLL              LC ++LK+VP+ 
Sbjct: 415 MSHRMLPEDLRKRIRRYEQYRWQETRGVEEETLLRXXXXXXXXXXXXHLCLDLLKKVPLF 474

Query: 279 KEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKG 284
           +  +E+ L+ +   ++ +++ E++Y+I+EG+ V +ML   +G
Sbjct: 475 EIMDEQLLDAVCDRLRPVLYTENSYVIREGDPVGEMLFVMRG 516

[Close]

BLAST of CsaV3_3G028060 vs. TAIR10
Match: AT4G01010.1 (cyclic nucleotide-gated channel 13)

HSP 1 Score: 151.4 bits (381), Expect = 9.5e-37
Identity = 103/315 (32.70%), Postives = 154/315 (48.89%), Query Frame = 0


Query: 39  ITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSAC-KFNSGCKVNSFSCEDI 98
           +T T      +N  L++LASHV GA WY  SV RE  CW+ AC K    C      C+  
Sbjct: 235 VTETAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWREACEKIPEVCNFRFLYCDGN 294

Query: 99  TS-NERFVDNFCP-INP---PNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFFWGLRAL 158
           +S    F+   CP INP    N  +F+FG+F +A +SG+   +DF  K   CF+WGLR L
Sbjct: 295 SSVRNDFLTTSCPFINPDDITNSTVFNFGIFTDALKSGIVESDDFWKKFFYCFWWGLRNL 354

Query: 159 SSFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNLQK--------------------- 218
           S+ G NL TS +  E IFA  + I+G++L   LIGN+QK                     
Sbjct: 355 SALGQNLNTSKFVGEIIFAVSICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQ 414

Query: 219 -----------KKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIKKELCCNILKRVPM 278
                      +K I+ + + K+     V  + LL          IK+  C ++LK+VP+
Sbjct: 415 WMSHRMLPDDLRKRIRRYEQYKWQETRGVEEENLLRNLPXXXXXXIKRHFCLDLLKKVPL 474

Query: 279 LKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLKFSKSIGARTTIST 313
            +  +E+ L+ +   +K +++ E++Y I+EG+ VE+ML   +G  L  + + G RT    
Sbjct: 475 FEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGK-LMSATTNGGRTGFFN 534

[Close]

BLAST of CsaV3_3G028060 vs. TAIR10
Match: AT2G46440.1 (cyclic nucleotide-gated channels)

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-36
Identity = 102/310 (32.90%), Postives = 161/310 (51.94%), Query Frame = 0


Query: 30  LYK--SAAPNDITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSGC 89
           LYK  + A   +  + +     NF L++L S+V GAFWY  S+ R+  CW++AC   S C
Sbjct: 182 LYKEVTRAFGTVAESKRVGAALNFFLYMLHSYVCGAFWYLSSIERKSTCWRAACARTSDC 241

Query: 90  K--VNSFSCEDITS-NERFVDNFCPINPP----NPAIFDFGLFLNAHQSGVTRV--NDFP 149
              V    C+   S N RF++  CP+  P    N   FDFG++++A +SGV  V   DFP
Sbjct: 242 NLTVTDLLCKRAGSDNIRFLNTSCPLIDPAQITNSTDFDFGMYIDALKSGVLEVKPKDFP 301

Query: 150 VKLLCCFFWGLRALSSFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNLQK------- 209
            K + CF+WGLR +S+ G NL TS+ A E  FA ++ ++G+LL   LIGN+QK       
Sbjct: 302 RKFVYCFWWGLRNISALGQNLETSNSAGEIFFAIIICVSGLLLFAVLIGNVQKYLQSSTT 361

Query: 210 -----------------KKEIKEFVRDK------FGWK--NDVNLKTLLDVFSSPFVEEI 269
                             +EI E+++++      + W+       + LL         E 
Sbjct: 362 RVDEMEEKKRDTEKWMSYREIPEYLKERIRRFEDYKWRRTKGTEEEALLRSLPKDLRLET 421

Query: 270 KKELCCNILKRVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGL 297
           K+ L   +LK+VP+L+  +++ L+ +   +K + + E +YI++EGE VE ML   +G  L
Sbjct: 422 KRYLFLKLLKKVPLLQAMDDQLLDALCARLKTVHYTEKSYIVREGEPVEDMLFIMRG-NL 481

[Close]

BLAST of CsaV3_3G028060 vs. Swiss-Prot
Match: sp|Q9SKD7|CNGC3_ARATH (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana OX=3702 GN=CNGC3 PE=2 SV=2)

HSP 1 Score: 161.8 bits (408), Expect = 1.3e-38
Identity = 97/295 (32.88%), Postives = 149/295 (50.51%), Query Frame = 0


Query: 39  ITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSGCKVNSFSCEDIT 98
           +T T       N  L++LASHV G+FWY  S+ R+  CW+ AC     C      C    
Sbjct: 239 VTETAWAGAALNLFLYMLASHVFGSFWYLISIERKDRCWREACAKIQNCTHAYLYCSPTG 298

Query: 99  SNER-FVDNFCPINPP----NPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFFWGLRALS 158
            + R F++  CP+  P    N  +F+FG+F +A QSGV    DFP K   CF+WGLR LS
Sbjct: 299 EDNRLFLNGSCPLIDPEEITNSTVFNFGIFADALQSGVVESRDFPKKFFYCFWWGLRNLS 358

Query: 159 SFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNLQK---------------------- 218
           + G NL TS++  E IFA ++ I+G++L   LIGN+QK                      
Sbjct: 359 ALGQNLKTSAFEGEIIFAIVICISGLVLFALLIGNMQKYLQSTTVRVEEMRVKRRDAEQW 418

Query: 219 ----------KKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIKKELCCNILKRVPML 278
                     +K I+++ + K+     V  + LL        ++IK+ LC  +LK+VP  
Sbjct: 419 MSHRMLPDDLRKRIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHLCLKLLKKVPWF 478

Query: 279 KEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLKFSKSIGART 297
           +  ++  L+ +   +K +++ E +YI++EGE VE ML   +G  L  + + G RT
Sbjct: 479 QAMDDRLLDALCARLKTVLYTEKSYIVREGEPVEDMLFIMRG-NLISTTTYGGRT 532

[Close]

BLAST of CsaV3_3G028060 vs. Swiss-Prot
Match: sp|O65717|CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 PE=1 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.6e-36
Identity = 102/321 (31.78%), Postives = 149/321 (46.42%), Query Frame = 0


Query: 30  LYKSAAPND--ITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNS-G 89
           LYK        +T T      FN  L++LASHV GAFWY FS+ RE  CW+ AC+ N+  
Sbjct: 240 LYKEVTRTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETVCWKQACERNNPP 299

Query: 90  CKVNSFSCEDITS-NERFVDNFCPINPPNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCF 149
           C      C+  T+    F++  CPI  PN  +FDFG+FL+A QSGV    DFP K   CF
Sbjct: 300 CISKLLYCDPETAGGNAFLNESCPIQTPNTTLFDFGIFLDALQSGVVESQDFPQKFFYCF 359

Query: 150 FWGLRALSSFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNLQK-------------- 209
           +WGL+ LSS G NL TS+Y  E  FA  +SIAG++L  +LIGN+Q               
Sbjct: 360 WWGLQNLSSLGQNLKTSTYIWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRV 419

Query: 210 ------------------KKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIKKELCCN 269
                             +K I+ + + K+     V+ + LL                  
Sbjct: 420 KRRDAEQWMSHRLLPENLRKRIRRYEQYKWQETRGVDEENLLSXXXXXXXXXXXXXXXXX 479

Query: 270 ILKRVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLKFSKSIG 313
                                 ++ +++ E +YI++EG+ V++ML   +G  L  + + G
Sbjct: 480 XXXXXXXXXXXXXXXXXXXXXRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGG 539

[Close]

BLAST of CsaV3_3G028060 vs. Swiss-Prot
Match: sp|Q9LNJ0|CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana OX=3702 GN=CNGC10 PE=2 SV=2)

HSP 1 Score: 153.7 bits (387), Expect = 3.5e-36
Identity = 93/282 (32.98%), Postives = 142/282 (50.35%), Query Frame = 0


Query: 39  ITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSGCKVNSFSCE-DI 98
           +T T      +N  L++LASHV GA WY  SV RE  CWQ AC+   GC +    CE D 
Sbjct: 235 VTETAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWQEACEKTKGCNMKFLYCENDR 294

Query: 99  TSNERFVDNFCPINPP----NPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFFWGLRALS 158
             +  F+   CP   P    N  IF+FG+F +A +SGV   +DF  K   CF+WGLR LS
Sbjct: 295 NVSNNFLTTSCPFLDPGDITNSTIFNFGIFTDALKSGVVESHDFWKKFFYCFWWGLRNLS 354

Query: 159 SFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNLQK---------------------- 218
           + G NL TS +  E IFA  + I+G++L   LIGN+QK                      
Sbjct: 355 ALGQNLQTSKFVGEIIFAISICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQW 414

Query: 219 ----------KKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIKKELCCNILKRVPML 278
                     +K I+ + + ++     V  +TLL              LC ++LK+VP+ 
Sbjct: 415 MSHRMLPEDLRKRIRRYEQYRWQETRGVEEETLLRXXXXXXXXXXXXHLCLDLLKKVPLF 474

Query: 279 KEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKG 284
           +  +E+ L+ +   ++ +++ E++Y+I+EG+ V +ML   +G
Sbjct: 475 EIMDEQLLDAVCDRLRPVLYTENSYVIREGDPVGEMLFVMRG 516

[Close]

BLAST of CsaV3_3G028060 vs. Swiss-Prot
Match: sp|Q9LD40|CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana OX=3702 GN=CNGC13 PE=3 SV=2)

HSP 1 Score: 151.4 bits (381), Expect = 1.7e-35
Identity = 103/315 (32.70%), Postives = 154/315 (48.89%), Query Frame = 0


Query: 39  ITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSAC-KFNSGCKVNSFSCEDI 98
           +T T      +N  L++LASHV GA WY  SV RE  CW+ AC K    C      C+  
Sbjct: 235 VTETAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWREACEKIPEVCNFRFLYCDGN 294

Query: 99  TS-NERFVDNFCP-INP---PNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFFWGLRAL 158
           +S    F+   CP INP    N  +F+FG+F +A +SG+   +DF  K   CF+WGLR L
Sbjct: 295 SSVRNDFLTTSCPFINPDDITNSTVFNFGIFTDALKSGIVESDDFWKKFFYCFWWGLRNL 354

Query: 159 SSFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNLQK--------------------- 218
           S+ G NL TS +  E IFA  + I+G++L   LIGN+QK                     
Sbjct: 355 SALGQNLNTSKFVGEIIFAVSICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQ 414

Query: 219 -----------KKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIKKELCCNILKRVPM 278
                      +K I+ + + K+     V  + LL          IK+  C ++LK+VP+
Sbjct: 415 WMSHRMLPDDLRKRIRRYEQYKWQETRGVEEENLLRNLPXXXXXXIKRHFCLDLLKKVPL 474

Query: 279 LKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLKFSKSIGARTTIST 313
            +  +E+ L+ +   +K +++ E++Y I+EG+ VE+ML   +G  L  + + G RT    
Sbjct: 475 FEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGK-LMSATTNGGRTGFFN 534

[Close]

BLAST of CsaV3_3G028060 vs. Swiss-Prot
Match: sp|Q9SKD6|CNG11_ARATH (Cyclic nucleotide-gated ion channel 11 OS=Arabidopsis thaliana OX=3702 GN=CNGC11 PE=2 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 2.2e-35
Identity = 102/310 (32.90%), Postives = 161/310 (51.94%), Query Frame = 0


Query: 30  LYK--SAAPNDITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSGC 89
           LYK  + A   +  + +     NF L++L S+V GAFWY  S+ R+  CW++AC   S C
Sbjct: 182 LYKEVTRAFGTVAESKRVGAALNFFLYMLHSYVCGAFWYLSSIERKSTCWRAACARTSDC 241

Query: 90  K--VNSFSCEDITS-NERFVDNFCPINPP----NPAIFDFGLFLNAHQSGVTRV--NDFP 149
              V    C+   S N RF++  CP+  P    N   FDFG++++A +SGV  V   DFP
Sbjct: 242 NLTVTDLLCKRAGSDNIRFLNTSCPLIDPAQITNSTDFDFGMYIDALKSGVLEVKPKDFP 301

Query: 150 VKLLCCFFWGLRALSSFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNLQK------- 209
            K + CF+WGLR +S+ G NL TS+ A E  FA ++ ++G+LL   LIGN+QK       
Sbjct: 302 RKFVYCFWWGLRNISALGQNLETSNSAGEIFFAIIICVSGLLLFAVLIGNVQKYLQSSTT 361

Query: 210 -----------------KKEIKEFVRDK------FGWK--NDVNLKTLLDVFSSPFVEEI 269
                             +EI E+++++      + W+       + LL         E 
Sbjct: 362 RVDEMEEKKRDTEKWMSYREIPEYLKERIRRFEDYKWRRTKGTEEEALLRSLPKDLRLET 421

Query: 270 KKELCCNILKRVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGL 297
           K+ L   +LK+VP+L+  +++ L+ +   +K + + E +YI++EGE VE ML   +G  L
Sbjct: 422 KRYLFLKLLKKVPLLQAMDDQLLDALCARLKTVHYTEKSYIVREGEPVEDMLFIMRG-NL 481

[Close]

BLAST of CsaV3_3G028060 vs. TrEMBL
Match: tr|A0A0A0LBE9|A0A0A0LBE9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G606870 PE=4 SV=1)

HSP 1 Score: 628.6 bits (1620), Expect = 7.4e-177
Identity = 315/328 (96.04%), Postives = 315/328 (96.04%), Query Frame = 0


Query: 1   MIQMIIKKYLQTSILNIDNMKCADYPCSSLYK-------------SAAPNDITVTGKFRG 60
           MIQMIIKKYLQTSILNIDNMKCADYPCSSLYK             SAAPNDITVTGKFRG
Sbjct: 1   MIQMIIKKYLQTSILNIDNMKCADYPCSSLYKIIRIYVLCKKLSRSAAPNDITVTGKFRG 60

Query: 61  TFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSGCKVNSFSCEDITSNERFVDNF 120
           TFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSGCKVNSFSCEDITSNERFVDNF
Sbjct: 61  TFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSGCKVNSFSCEDITSNERFVDNF 120

Query: 121 CPINPPNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFFWGLRALSSFGSNLTTSSYACE 180
           CPINPPNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFFWGLRALSSFGSNLTTSSYACE
Sbjct: 121 CPINPPNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFFWGLRALSSFGSNLTTSSYACE 180

Query: 181 NIFAALVSIAGILLVVYLIGNLQKKKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIK 240
           NIFAALVSIAGILLVVYLIGNLQKKKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIK
Sbjct: 181 NIFAALVSIAGILLVVYLIGNLQKKKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIK 240

Query: 241 KELCCNILKRVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLK 300
           KELCCNILKRVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLK
Sbjct: 241 KELCCNILKRVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLK 300

Query: 301 FSKSIGARTTISTFGKGDLFGEQLLIGQ 316
           FSKSIGARTTISTFGKGDLFGEQLLIGQ
Sbjct: 301 FSKSIGARTTISTFGKGDLFGEQLLIGQ 328

[Close]

BLAST of CsaV3_3G028060 vs. TrEMBL
Match: tr|A0A1S4DXJ0|A0A1S4DXJ0_CUCME (cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491398 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 2.4e-119
Identity = 226/316 (71.52%), Postives = 247/316 (78.16%), Query Frame = 0


Query: 27  CSSLYKSAAPNDITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSG 86
           C    +SAA NDIT T +FRG FNF+L I ASHVVG FWYCFS+L EL CW+SAC+FN G
Sbjct: 173 CKKFSRSAASNDITGTRQFRGIFNFVLLIFASHVVGGFWYCFSILTELNCWRSACEFNGG 232

Query: 87  CKVNSFSCEDITSNERFVDNFCPINPPNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFF 146
           C+VNSFSCEDIT NE+FVD +C INPP   IFDFGLFL AHQSG+TR+NDFP KLL CF 
Sbjct: 233 CRVNSFSCEDITGNEQFVDKYCLINPP---IFDFGLFLKAHQSGITRINDFPAKLLYCFS 292

Query: 147 WGLRALSSFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNL----------------- 206
           WGLRALSSFGSNLT SS++ ENIFAAL++I  ILLVVYLIGNL                 
Sbjct: 293 WGLRALSSFGSNLTPSSHSSENIFAALITIVEILLVVYLIGNLQSSTLRSEEKRRTMQKK 352

Query: 207 -------------QKKKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIKKELCCNILK 266
                        QKKKEIKEFVRDKF WKNDVNLKTLLDVFSSPFVEEIKKELC +ILK
Sbjct: 353 DVEIDLWIDYYNFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFSSPFVEEIKKELCWDILK 412

Query: 267 RVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLKFSKSIGART 313
           RV MLKEFEEEKL+EMMKDMK M+F E +YII+EGE VEQMLLFTKGMGL FSKS G RT
Sbjct: 413 RVLMLKEFEEEKLKEMMKDMKPMVFGEQSYIIREGEPVEQMLLFTKGMGLTFSKSTGTRT 472

[Close]

BLAST of CsaV3_3G028060 vs. TrEMBL
Match: tr|A0A1S4DYA3|A0A1S4DYA3_CUCME (cyclic nucleotide-gated ion channel 1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491398 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 7.1e-119
Identity = 226/320 (70.62%), Postives = 247/320 (77.19%), Query Frame = 0


Query: 27  CSSLYKSAAPNDITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSG 86
           C    +SAA NDIT T +FRG FNF+L I ASHVVG FWYCFS+L EL CW+SAC+FN G
Sbjct: 66  CKKFSRSAASNDITGTRQFRGIFNFVLLIFASHVVGGFWYCFSILTELNCWRSACEFNGG 125

Query: 87  CKVNSFSCEDITSNERFVDNFCPINPPNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFF 146
           C+VNSFSCEDIT NE+FVD +C INPP   IFDFGLFL AHQSG+TR+NDFP KLL CF 
Sbjct: 126 CRVNSFSCEDITGNEQFVDKYCLINPP---IFDFGLFLKAHQSGITRINDFPAKLLYCFS 185

Query: 147 WGLRALSSFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNL----------------- 206
           WGLRALSSFGSNLT SS++ ENIFAAL++I  ILLVVYLIGNL                 
Sbjct: 186 WGLRALSSFGSNLTPSSHSSENIFAALITIVEILLVVYLIGNLQVYLQSSTLRSEEKRRT 245

Query: 207 -----------------QKKKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIKKELCC 266
                            QKKKEIKEFVRDKF WKNDVNLKTLLDVFSSPFVEEIKKELC 
Sbjct: 246 MQKKDVEIDLWIDYYNFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFSSPFVEEIKKELCW 305

Query: 267 NILKRVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLKFSKSI 313
           +ILKRV MLKEFEEEKL+EMMKDMK M+F E +YII+EGE VEQMLLFTKGMGL FSKS 
Sbjct: 306 DILKRVLMLKEFEEEKLKEMMKDMKPMVFGEQSYIIREGEPVEQMLLFTKGMGLTFSKST 365

[Close]

BLAST of CsaV3_3G028060 vs. TrEMBL
Match: tr|A0A1S3BLM4|A0A1S3BLM4_CUCME (cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491398 PE=4 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 7.1e-119
Identity = 226/320 (70.62%), Postives = 247/320 (77.19%), Query Frame = 0


Query: 27  CSSLYKSAAPNDITVTGKFRGTFNFLLFILASHVVGAFWYCFSVLRELYCWQSACKFNSG 86
           C    +SAA NDIT T +FRG FNF+L I ASHVVG FWYCFS+L EL CW+SAC+FN G
Sbjct: 173 CKKFSRSAASNDITGTRQFRGIFNFVLLIFASHVVGGFWYCFSILTELNCWRSACEFNGG 232

Query: 87  CKVNSFSCEDITSNERFVDNFCPINPPNPAIFDFGLFLNAHQSGVTRVNDFPVKLLCCFF 146
           C+VNSFSCEDIT NE+FVD +C INPP   IFDFGLFL AHQSG+TR+NDFP KLL CF 
Sbjct: 233 CRVNSFSCEDITGNEQFVDKYCLINPP---IFDFGLFLKAHQSGITRINDFPAKLLYCFS 292

Query: 147 WGLRALSSFGSNLTTSSYACENIFAALVSIAGILLVVYLIGNL----------------- 206
           WGLRALSSFGSNLT SS++ ENIFAAL++I  ILLVVYLIGNL                 
Sbjct: 293 WGLRALSSFGSNLTPSSHSSENIFAALITIVEILLVVYLIGNLQVYLQSSTLRSEEKRRT 352

Query: 207 -----------------QKKKEIKEFVRDKFGWKNDVNLKTLLDVFSSPFVEEIKKELCC 266
                            QKKKEIKEFVRDKF WKNDVNLKTLLDVFSSPFVEEIKKELC 
Sbjct: 353 MQKKDVEIDLWIDYYNFQKKKEIKEFVRDKFEWKNDVNLKTLLDVFSSPFVEEIKKELCW 412

Query: 267 NILKRVPMLKEFEEEKLEEMMKDMKLMIFAEHNYIIQEGELVEQMLLFTKGMGLKFSKSI 313
           +ILKRV MLKEFEEEKL+EMMKDMK M+F E +YII+EGE VEQMLLFTKGMGL FSKS 
Sbjct: 413 DILKRVLMLKEFEEEKLKEMMKDMKPMVFGEQSYIIREGEPVEQMLLFTKGMGLTFSKST 472

[Close]

BLAST of CsaV3_3G028060 vs. TrEMBL
Match: tr|M5Y1F8|M5Y1F8_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa016982mg PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 4.2e-55
Identity = 136/352 (38.64%), Postives = 197/352 (55.97%), Query Frame = 0


Query: 7   KKYLQTSIL--NIDNMKCADYPCSSLYKSAAPNDITVTGKF-RGTFNFLLFILASHVVGA 66
           +K L + +L   +  + C    C  L K    N    TG + +G FNF L+ILASHV+GA
Sbjct: 111 RKLLSSLVLLQYVPRVLCIYLSCKKLNK----NPSVETGIWVKGLFNFFLYILASHVLGA 170

Query: 67  FWYCFSVLRELYCWQSACKFNSGCKVNSFSC-----EDITSNERFVDNFCPINPPNPAIF 126
           FWY FS+ RE  CWQ AC+ + GC+ ++F C      D+TS   F++ FCP+NPPN   F
Sbjct: 171 FWYFFSIQRETACWQYACR-SGGCEPSTFHCNGDTSRDVTSRVTFLNKFCPVNPPNATTF 230

Query: 127 DFGLFLNAHQSGVTRVNDFPVKLLCCFFWGLRALSSFGSNLTTSSYACENIFAALVSIAG 186
           DFG+FL A QS V    D+  K L CF+WGLR LSS G NL TS+YA EN+FA  +SI G
Sbjct: 231 DFGIFLEAIQSKVLGSKDYLDKFLNCFWWGLRNLSSLGQNLQTSTYAWENLFAVSISIIG 290

Query: 187 ILLVVYLIGNLQK--------------------------------KKEIKEFVRD----K 246
           +LL +YLIGNLQ                                  KE+K  + +    K
Sbjct: 291 LLLFLYLIGNLQTYMQLSTTRSEKLRRKMKMKDLDIELWLSKNGLPKEMKTVIMENLLRK 350

Query: 247 FGWKNDVNLKTLLDVFSSPFVEEIKKELCCNILKRVPMLKEFEEEKLEEMMKDMKLMIFA 306
                DV+++ +L +        IK  LC  ILK+VPML+  +E+ L+ + +++K +++ 
Sbjct: 351 LEENKDVHVENMLSILPLEHKNNIKYHLCLAILKKVPMLQTVDEQVLKVICENLKPVMYT 410

Query: 307 EHNYIIQEGELVEQMLLFTKGMGLKF--SKSIGARTTISTFGKGDLFGEQLL 313
           E  +II+EGE +++ML  T+G+   +  +KS G+ ++    GK D +GE+LL
Sbjct: 411 EDIHIIREGEPLDKMLFITQGIVWDYTSNKSSGSPSSTRLLGKNDFYGEELL 457

The following BLAST results are available for this feature:

BLAST of CsaV3_3G028060 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN58279.1	1.1e-176	96.04	hypothetical protein Csa_3G606870 [Cucumis sativus]	[more]
XP_011651603.1	1.9e-123	71.88	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis sativu...	[more]
XP_011651604.1	1.9e-123	71.88	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis sativu...	[more]
XP_016900693.1	3.7e-119	71.52	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis melo]	[more]
XP_008449547.1	1.1e-118	70.63	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo]	[more]

BLAST of CsaV3_3G028060 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46430.1	7.0e-40	32.88	cyclic nucleotide gated channel 3	[more]
AT5G53130.1	8.6e-38	31.78	cyclic nucleotide gated channel 1	[more]
AT1G01340.2	1.9e-37	32.98	cyclic nucleotide gated channel 10	[more]
AT4G01010.1	9.5e-37	32.70	cyclic nucleotide-gated channel 13	[more]
AT2G46440.1	1.2e-36	32.90	cyclic nucleotide-gated channels	[more]

BLAST of CsaV3_3G028060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SKD7\|CNGC3_ARATH	1.3e-38	32.88	Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|O65717\|CNGC1_ARATH	1.6e-36	31.78	Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 P...	[more]
sp\|Q9LNJ0\|CNG10_ARATH	3.5e-36	32.98	Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9LD40\|CNG13_ARATH	1.7e-35	32.70	Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9SKD6\|CNG11_ARATH	2.2e-35	32.90	Cyclic nucleotide-gated ion channel 11 OS=Arabidopsis thaliana OX=3702 GN=CNGC11...	[more]

BLAST of CsaV3_3G028060 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LBE9\|A0A0A0LBE9_CUCSA	7.4e-177	96.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G606870 PE=4 SV=1	[more]
tr\|A0A1S4DXJ0\|A0A1S4DXJ0_CUCME	2.4e-119	71.52	cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A1S4DYA3\|A0A1S4DYA3_CUCME	7.1e-119	70.63	cyclic nucleotide-gated ion channel 1-like isoform X3 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A1S3BLM4\|A0A1S3BLM4_CUCME	7.1e-119	70.63	cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
tr\|M5Y1F8\|M5Y1F8_PRUPE	4.2e-55	38.64	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa016982m...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018490	cNMP-bd-like
IPR000595	cNMP-bd_dom
IPR014710	RmlC-like_jellyroll

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G028060.1	CsaV3_3G028060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014710	RmlC-like jelly roll fold	GENE3D	G3DSA:2.60.120.10		coord: 206..315 e-value: 1.6E-14 score: 55.9
None	No IPR available	PANTHER	PTHR10217:SF622	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 11-RELATED	coord: 194..313 coord: 39..192
None	No IPR available	PANTHER	PTHR10217	VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL	coord: 194..313 coord: 39..192
None	No IPR available	SUPERFAMILY	SSF81324	Voltage-gated potassium channels	coord: 134..191 coord: 48..73
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 240..315 score: 13.901
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	SSF51206	cAMP-binding domain-like	coord: 192..313

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G028060	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G028060	Cucurbita maxima (Rimu)	cmacucB0378
CsaV3_3G028060	Cucurbita maxima (Rimu)	cmacucB0492
CsaV3_3G028060	Cucurbita moschata (Rifu)	cmocucB0481
CsaV3_3G028060	Cucurbita pepo (Zucchini)	cpecucB0038
CsaV3_3G028060	Cucurbita pepo (Zucchini)	cpecucB0253
CsaV3_3G028060	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G028060	Bottle gourd (USVL1VR-Ls)	cuclsiB238
CsaV3_3G028060	Watermelon (Charleston Gray)	cucwcgB247
CsaV3_3G028060	Watermelon (97103) v1	cucwmB263
CsaV3_3G028060	Silver-seed gourd	carcucB1031