CsaV3_3G027720 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGTGTGTATGTAAAACCCAACTCCATGTTCCGTTGTTCACTTCAAATTCAATTTTGGGTGCGTTCACTTTTCTGATCTGTGATTGTTGCATGAAAATGCGTGTTCATTACAACTCCCTCTCACACAAATAAAAATAAATCTCCAATTTTCTTCTTAATTAATTCTCTTCAATATTTTCACAGCTCCCACATTCCCCCACCCAAACCCACCCCCGTTCTTTACTCCCTTCATCCCATCGCCCTCCTCATGCTCCCATCCTTCGCCAGGTTCCTTCTACCTAATTCATTCATTCATTCGTTCGTTCATTCGTTCATATGTCCATTGATCCCATTCTTTTTTTCTTTTTTCTTTTAACTTCTCTGTATTGGAAACGATCTTGACTGTTGATTTTCGATTCTTATTTTTTTTCTTTAGAGAGATTGAGATGATCGGCAATGGTCTTCTTAGAGGGAGTTTCAGGTCGTTTTCTTCAGTTTCCAGTCCTCGGAGAAGGTATGGATTTCGATTATTTCTTCTTCATTTTTGATCTTTTCGTTTTAGCTTTCCTGATTCTGTTTATTTTATTTATTAAAAAACAAAAGGAATCTAAGTAAGGGAGGTTTTAATTTCGCATCCTTTTTGCATTATTTTGGATTTATGTGATTTTTTGTTGTTTTACCATATAATTCGGAAGCAAGATTCTCACGCCTTTACTTTCGTCATCGGCCGTCTTCAATTTTAATCATTTCTTTTTCTTTTTCTTTTTCCTTATGATAATAACTAAACCTTCTGCCGTGTTCATCTTTCAGTTCTTGAATAATGTGTGTGTGTCTTCTTTCTTTCTTTTTTTATCAATTAAAAATCTACCAATTGTAAAAAATGACGAAAAATGAAAAACTAATTTCAAAAACTAACATAATTTTCAGAAATTAAAATAAAATCAATATCAAATGTTACGCTTTGAGTTTTATTCTAAAGGTGAAATACTCCTAAATCTTAGGTACACTTCATAGATTTGGAAGAAATTCATGTTTTACTCTTTAAGTTTATTTCGAAAAAATATATATATATGTTTTGATTTTTAAAATGTTACGAAAGCAAATGTAGTTGTAGCCATAATCATGCACAGAAATTGGAAGGTATGCTTCATATTTTCTTACCCTTATTAAAAATTAACATAGTTCGTTGTTGTGCTTTATTCTATTTTTCAAAGATATGATCTGCCTTTTTAAATAATAATTTTTAATGCACTACTTATCTTCCCAATTTTTGTAACGAGTGTTGTAAAATTCATGTTATTTTGAAATTAAAAAATATATTTTTTTTTAGGATACATTTTAAAAGGAAGCTTTTAACTTAGTCTAACTAATAGCGTAATTGAAAATTTATGATATGTATTTAGTTGGGACATGATCAAATTTTATATAAAATTCCATTTTTGAGACAAATTTTAAAATGAAGTTTGTAAAGTCTTAATTAAAGGGAAATTTATTTGAAAGTGGAGTATTTTGTATAATTATATATCTATTTTAAAATTACAAAATTGTATTTGTAAAAGACAAAACCTAAAGAGAAATGATTACTCCTTAAAAGGGAAGACACAAATGTGAGTCCAGTGTCCATATATATGTGGGACACAGTCTTTAAAGTTAATTCTAAAATCTTTCCTTTTTCTTTCTTTTACCCTATTTGTCCTGTTTTTAAATTTCAATACTATTTTAAATTATATTAGTAAGTTAAATACTTTAAATACTATTTTCATCATTATTTAATATTAAAATTGAACAAACCACAAAAATATATTTTTGATTTAGTACTTGAACCAAACAAAAGTAGTATGACTGTACATGATAGAATAAGTACCATTTATAAAGTCATGACCATGGGAGGAGGGTCTTTTATTTATGCAAAAAGCAAGTCACTTTGAATAGCATAACCTTTTTTTTTCCTTTTGAAAAAATATATTATCCAAAACACATTTTGAAAGAATTCTTATTCTTAAAAATATATTTTTTTAATAAATATTATCCAAATAATCATTGAGCTATGAGTAAACATTTCTTTTTCTTCTTTTCAAAAGTAAATTAGGAGAAAAATGCATGTTTCATAAAGATTATATTCTGACTAATTTTGAATAACCTTTCATCTTTGGCTATAGACAGGTTGCATTTTATTAAGGTTATGCATTTTAAAACAACCATATGTTTTTTAAAATATTATCTTCACATGTGTACTGAATTTCTTAAATGCATAGATTAATATAATATTAGAAAGAAGATTGATATAATCAAATAATTAATTGTTGTCATCACTTTGGTAGTATTGTTTTGAGTGAGAACATTGTTTATTTAGGAAATTATTAACCAATAGCAAATCTATTTAATTATAAAAGCTTAAGTTTGATTGTTGAATAGATAAAATATGAATTAACAGTGAATATGTTTATATGTTCACTAAAATAGAATAAATTTAAAAATATAAAAACGAAAATGTTGATTTAAGAAAATATGTCAATTAATCTAATAAATAGAGGAGAAAAGGAAGCAGAAGAGGTCACACCCCCTTCGCTTTCTCCGCAGCTGTCTTTTCTGTCACACTTTCTTTTTCCGCTTAATGTAATAAGAAGTTAATTATAACCATGACAATGAGTCCTATTTGATCTTCAAAAGAAGAAACAAAAAAGTCATATTCCTATATTTATTATCACATTTCTTTTTAATAATAATTCTTTATTGCTTTTACCATTTATGGTATACACACTAATAACCTAATACTAATTTTAAAATTTTTAAAATTTCACTCTTCAAATGATCAAAGCTTAGAACGTATTATACATTTAAGAACTTTTAAAATGAAATATATTTTAAAAAAAACTTTAAATTCTATCTATAAATGGGATAATATATAAGTTATTTAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTATTTTATGTCAAGATTTAGACTTATTTTCAAATTTCTTTCAAGTTTTTAAAATTAAGTTTTCGTTTTGTATTTGAGGTACTTTACATTTCTTATTTACTTTTAACCAAGTTAGAATGGAAGTAATCATAATAAACTAAAATTTCAATATTAAAAATAAGTTAGATAATTTTTATTTTTCTCTTTTATGAGTTGCAAGTTGCATCGATTAGAAAATGTAAAATTCCAACCTTAAAATCGAGAGAGATATTATATGTTAAATGAACTATGTTTTTTGTGTGTAAAAGGTTAGATGAACTACATTCATGTCAACAATCTCTTACACTTTTTAACGTAAATTTGGCTTCCAAAACTAAAATAAATATATAATAGAAAAATTAAAAAATTAAACTAATAAATAAAGATTTTACTCTTTTAACTAAGGTGCTTATTATTTTATGTTATATTTACATTGGTAGACATTCTAATTTATCATGTATGTTTGATGAATTTTATTAGGATATAATAGAAAATACATCTCTCATGAGAATGGAGATTTAATAGATTAATGTGTAAAAGAAATGGTTATTATTGAGGCTTAATTATTTTCATTATTTGTGATCGTTGGAATCAGGCTCGAAGGCAAGGTGGCTTTAATAACCGGGGCAGCAAATGGGCTGGGCCAAGCCACAGCCCAAGAGTTTGTGGATCAGGGGGCCCATGTGATCATTGCCGATATAGACACCACATTGGGCCCACAAGTGGCCGAACAACTAGGCCACACAGCCAAATTCGTAGAATGCGACGTGGCGCTGGAGTCTGAAGTTGCGGCCGCAGTAAACTTCGCGGTGACCCACCACGGAAAACTAGACATAATGTACAACAACGCCGGAATCACCGGACCGGCAGTGCCACCCAGCATAGCGGAGCTAGACCTAGCCGACTTCGACCGAGTAATGAATGTCAATGTCCGTGGAGTCGTAGCCGGAATAAAACACGCGGCTCGAGTGATGGTCCCAGCTGGGTGCGGGTCCATCCTATGCACATCAAGCATAAGTGGTCTCATGGGTGGGTTAGGCCCACATCCGTATTCAATATCCAAACACGCAATTCCAGGGATAGTGAGGTCGGCGGCGACGGAGCTGTGCCGTAGCGGGGTACGGGTGAATTGCATATCGCCGGCACCGGTAGCGACGGCGATGGCGGTGAAGGGGATAGGAGAAATGTACAAAGGGGTTAGCAAGGAAGAGATTGTTGGAATAATAAATGGACTTGGGGTTCTGAAGGGCGCAATTTGCGAGGAGGCTGACGTGGCGAAAGCGGCTTTGTTTTTGGCTTGTGATGATTCGAAATACATCACCGGTCATAATCTGGTTGTAGACGGCGGTTTTACTTCCTTCAAAAACCTCGACTTCCCTTCCTTCCATTAGTCTATTGCCACGTGTGTAGATAAGTAAAAAACCCATTCAAATATCATTCATCTTATTCTAATTTGGTCATCTTCCTTCTATGTACTTCCAATTATCAAATTTCGGTACATGTATTTTTAATATACTTTAATATTTGTACCAAATCTTAGGATTTTTTTTGCTTTAGCATATCAAAATCAAAAACTATTATTAATTATTTACAAATGTATTTTATGTCAAAAAGATTGACCAAAATATACTTTTCTTGTTCGTAACATTCTTTAAAGTTGTTATCTATTATGTACCTAAAGTTTCAAAACAAACCATTTAATTTGTTAAAGTTAGATAAATAATT ATGCTCCCATCCTTCGCCAGAGAGATTGAGATGATCGGCAATGGTCTTCTTAGAGGGAGTTTCAGGTCGTTTTCTTCAGTTTCCAGTCCTCGGAGAAGGCTCGAAGGCAAGGTGGCTTTAATAACCGGGGCAGCAAATGGGCTGGGCCAAGCCACAGCCCAAGAGTTTGTGGATCAGGGGGCCCATGTGATCATTGCCGATATAGACACCACATTGGGCCCACAAGTGGCCGAACAACTAGGCCACACAGCCAAATTCGTAGAATGCGACGTGGCGCTGGAGTCTGAAGTTGCGGCCGCAGTAAACTTCGCGGTGACCCACCACGGAAAACTAGACATAATGTACAACAACGCCGGAATCACCGGACCGGCAGTGCCACCCAGCATAGCGGAGCTAGACCTAGCCGACTTCGACCGAGTAATGAATGTCAATGTCCGTGGAGTCGTAGCCGGAATAAAACACGCGGCTCGAGTGATGGTCCCAGCTGGGTGCGGGTCCATCCTATGCACATCAAGCATAAGTGGTCTCATGGGTGGGTTAGGCCCACATCCGTATTCAATATCCAAACACGCAATTCCAGGGATAGTGAGGTCGGCGGCGACGGAGCTGTGCCGTAGCGGGGTACGGGTGAATTGCATATCGCCGGCACCGGTAGCGACGGCGATGGCGGTGAAGGGGATAGGAGAAATGTACAAAGGGGTTAGCAAGGAAGAGATTGTTGGAATAATAAATGGACTTGGGGTTCTGAAGGGCGCAATTTGCGAGGAGGCTGACGTGGCGAAAGCGGCTTTGTTTTTGGCTTGTGATGATTCGAAATACATCACCGGTCATAATCTGGTTGTAGACGGCGGTTTTACTTCCTTCAAAAACCTCGACTTCCCTTCCTTCCATTAG ATGCTCCCATCCTTCGCCAGAGAGATTGAGATGATCGGCAATGGTCTTCTTAGAGGGAGTTTCAGGTCGTTTTCTTCAGTTTCCAGTCCTCGGAGAAGGCTCGAAGGCAAGGTGGCTTTAATAACCGGGGCAGCAAATGGGCTGGGCCAAGCCACAGCCCAAGAGTTTGTGGATCAGGGGGCCCATGTGATCATTGCCGATATAGACACCACATTGGGCCCACAAGTGGCCGAACAACTAGGCCACACAGCCAAATTCGTAGAATGCGACGTGGCGCTGGAGTCTGAAGTTGCGGCCGCAGTAAACTTCGCGGTGACCCACCACGGAAAACTAGACATAATGTACAACAACGCCGGAATCACCGGACCGGCAGTGCCACCCAGCATAGCGGAGCTAGACCTAGCCGACTTCGACCGAGTAATGAATGTCAATGTCCGTGGAGTCGTAGCCGGAATAAAACACGCGGCTCGAGTGATGGTCCCAGCTGGGTGCGGGTCCATCCTATGCACATCAAGCATAAGTGGTCTCATGGGTGGGTTAGGCCCACATCCGTATTCAATATCCAAACACGCAATTCCAGGGATAGTGAGGTCGGCGGCGACGGAGCTGTGCCGTAGCGGGGTACGGGTGAATTGCATATCGCCGGCACCGGTAGCGACGGCGATGGCGGTGAAGGGGATAGGAGAAATGTACAAAGGGGTTAGCAAGGAAGAGATTGTTGGAATAATAAATGGACTTGGGGTTCTGAAGGGCGCAATTTGCGAGGAGGCTGACGTGGCGAAAGCGGCTTTGTTTTTGGCTTGTGATGATTCGAAATACATCACCGGTCATAATCTGGTTGTAGACGGCGGTTTTACTTCCTTCAAAAACCTCGACTTCCCTTCCTTCCATTAG MLPSFAREIEMIGNGLLRGSFRSFSSVSSPRRRLEGKVALITGAANGLGQATAQEFVDQGAHVIIADIDTTLGPQVAEQLGHTAKFVECDVALESEVAAAVNFAVTHHGKLDIMYNNAGITGPAVPPSIAELDLADFDRVMNVNVRGVVAGIKHAARVMVPAGCGSILCTSSISGLMGGLGPHPYSISKHAIPGIVRSAATELCRSGVRVNCISPAPVATAMAVKGIGEMYKGVSKEEIVGIINGLGVLKGAICEEADVAKAALFLACDDSKYITGHNLVVDGGFTSFKNLDFPSFH
BLAST of CsaV3_3G027720 vs. NCBI nr
Match: XP_011651586.1 (PREDICTED: short-chain dehydrogenase reductase 3c-like [Cucumis sativus] >KGN58243.1 hypothetical protein Csa_3G598890 [Cucumis sativus]) HSP 1 Score: 585.5 bits (1508), Expect = 1.0e-163 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. NCBI nr
Match: XP_008450017.1 (PREDICTED: momilactone A synthase-like [Cucumis melo]) HSP 1 Score: 531.9 bits (1369), Expect = 1.3e-147 Identity = 272/287 (94.77%), Postives = 278/287 (96.86%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. NCBI nr
Match: XP_023527081.1 (short-chain dehydrogenase reductase 2a-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 517.7 bits (1332), Expect = 2.6e-143 Identity = 264/297 (88.89%), Postives = 279/297 (93.94%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. NCBI nr
Match: XP_022983588.1 (short-chain dehydrogenase reductase 2a-like [Cucurbita maxima]) HSP 1 Score: 515.8 bits (1327), Expect = 1.0e-142 Identity = 263/297 (88.55%), Postives = 278/297 (93.60%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. NCBI nr
Match: XP_022935113.1 (short-chain dehydrogenase reductase 2a-like [Cucurbita moschata]) HSP 1 Score: 513.1 bits (1320), Expect = 6.5e-142 Identity = 262/297 (88.22%), Postives = 277/297 (93.27%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. TAIR10
Match: AT3G26760.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 343.2 bits (879), Expect = 1.6e-94 Identity = 174/299 (58.19%), Postives = 221/299 (73.91%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. TAIR10
Match: AT3G26770.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 323.6 bits (828), Expect = 1.3e-88 Identity = 155/263 (58.94%), Postives = 203/263 (77.19%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. TAIR10
Match: AT4G03140.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 311.6 bits (797), Expect = 5.2e-85 Identity = 157/282 (55.67%), Postives = 204/282 (72.34%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. TAIR10
Match: AT3G51680.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 236.9 bits (603), Expect = 1.6e-62 Identity = 129/270 (47.78%), Postives = 175/270 (64.81%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. TAIR10
Match: AT2G47120.1 (NAD(P)-binding Rossmann-fold superfamily protein) HSP 1 Score: 217.2 bits (552), Expect = 1.3e-56 Identity = 122/259 (47.10%), Postives = 164/259 (63.32%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. Swiss-Prot
Match: sp|Q9SCU0|SDR2A_ARATH (Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana OX=3702 GN=SDR2a PE=3 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 2.9e-61 Identity = 129/270 (47.78%), Postives = 175/270 (64.81%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. Swiss-Prot
Match: sp|P50160|TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays OX=4577 GN=TS2 PE=2 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 4.2e-60 Identity = 124/283 (43.82%), Postives = 173/283 (61.13%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. Swiss-Prot
Match: sp|Q94KL7|SILD_FORIN (Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia OX=55183 PE=1 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 1.8e-58 Identity = 126/257 (49.03%), Postives = 172/257 (66.93%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. Swiss-Prot
Match: sp|Q7FAE1|MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0179200 PE=2 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 5.7e-57 Identity = 129/264 (48.86%), Postives = 170/264 (64.39%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. Swiss-Prot
Match: sp|O80714|SDR3C_ARATH (Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana OX=3702 GN=SDR3c PE=3 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 2.4e-55 Identity = 122/259 (47.10%), Postives = 164/259 (63.32%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. TrEMBL
Match: tr|A0A0A0L8S5|A0A0A0L8S5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G598890 PE=4 SV=1) HSP 1 Score: 585.5 bits (1508), Expect = 6.8e-164 Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. TrEMBL
Match: tr|A0A1S3BPB3|A0A1S3BPB3_CUCME (momilactone A synthase-like OS=Cucumis melo OX=3656 GN=LOC103491733 PE=4 SV=1) HSP 1 Score: 531.9 bits (1369), Expect = 8.9e-148 Identity = 272/287 (94.77%), Postives = 278/287 (96.86%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. TrEMBL
Match: tr|A0A2N9J508|A0A2N9J508_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59455 PE=4 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 3.7e-109 Identity = 201/294 (68.37%), Postives = 237/294 (80.61%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. TrEMBL
Match: tr|A0A2I4FTB1|A0A2I4FTB1_9ROSI (secoisolariciresinol dehydrogenase-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109001859 PE=4 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 3.7e-109 Identity = 202/295 (68.47%), Postives = 238/295 (80.68%), Query Frame = 0
BLAST of CsaV3_3G027720 vs. TrEMBL
Match: tr|A0A251Q8B8|A0A251Q8B8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G312700 PE=4 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 8.2e-109 Identity = 203/298 (68.12%), Postives = 243/298 (81.54%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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