CsaV3_3G027460 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G027460
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 23760196 .. 23761255 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCCATTCATTTTCCCTCTCCCATTTCTCTCTCCTATTTTTTTACCTTGTATATAATCTCTCAATCTCCCCTCTTCATCTTCATCCCTCCATCTCTCTAACATTGCAGGGTTTTCTCTCTTCTCCTAAGAGAAAATTACTGCCTTCTCATATCAAATTTCACATTTTTACCCGTTTTTTTTACATTCTAATTTTACTATGGCTTCTCAAACTGTTCTTGTTTTTGCTTTGATCTTCCTTGCCGCTGTTGCCGGAGTTTTTGCGGAGGCACCGACCGAATCTCCTTCAACATCTCCCTCACCTAAAGCTTCCCCATCGGACTCTGAATCGCCTTCACCGTCTTCTTCTTCTCCTGCAGGCTCTCCAAAGGCCTCACCTGAGACGACATCCCCATCCCCGGCAGCTTCTTCTCCATCTTCGTCCTCTGATGCTCCAACCAGCAATTCGCCCACCAGCTCTCCAACATCCTCCCCTTCCGTTTCTCCTTCTCCTGCCACTGACTCCCCCTCTGACTCTCCTGCTTCTGACTCTCCTGTTGCTGACTCTCCTGCTGACAGTCCTGCAGACACCCCGACTGCTGCTTCACCAGATTCCGATGTCTCTTCTCCTCCATCACCTGATGCCGCTGATGCCCCCACTGCTGATGGTCCTGCTGCTGCCGATGGCCCTACTGCCGCCGATGGCCCTACTGCCGCCGATGGCCCTGTTGCCGCCGATTCTCCTGCTGATTCACCCGCCAGTGACGAAAGCAGCGGTACAGATCTGAAACTCACCTCCGCCATGGTCGTTGGTGTCGTTGCCACTGTTGGATTCTTTGCATTCTAAAGATAGCTTATTGATCTAAGCATGTTTAGAGAGTATGGGTGATAAATTCTCACATTAAATGAGATTGTATTCTTTTAAATTTATATAATTAAAATAAAACAAAAAATGAAGAATGTGTAAACCAATTCATCTGGAAAAAAAAGTTGAATTATAATTTTGGACATTGTACTATACTCATTTTGCATTTATATAAAATTTTACATTTTGAAAAAAATAACTAAGAGATAAGTATTTG

mRNA sequence

ATGGCTTCTCAAACTGTTCTTGTTTTTGCTTTGATCTTCCTTGCCGCTGTTGCCGGAGTTTTTGCGGAGGCACCGACCGAATCTCCTTCAACATCTCCCTCACCTAAAGCTTCCCCATCGGACTCTGAATCGCCTTCACCGTCTTCTTCTTCTCCTGCAGGCTCTCCAAAGGCCTCACCTGAGACGACATCCCCATCCCCGGCAGCTTCTTCTCCATCTTCGTCCTCTGATGCTCCAACCAGCAATTCGCCCACCAGCTCTCCAACATCCTCCCCTTCCGTTTCTCCTTCTCCTGCCACTGACTCCCCCTCTGACTCTCCTGCTTCTGACTCTCCTGTTGCTGACTCTCCTGCTGACAGTCCTGCAGACACCCCGACTGCTGCTTCACCAGATTCCGATGTCTCTTCTCCTCCATCACCTGATGCCGCTGATGCCCCCACTGCTGATGGTCCTGCTGCTGCCGATGGCCCTACTGCCGCCGATGGCCCTACTGCCGCCGATGGCCCTGTTGCCGCCGATTCTCCTGCTGATTCACCCGCCAGTGACGAAAGCAGCGGTACAGATCTGAAACTCACCTCCGCCATGGTCGTTGGTGTCGTTGCCACTGTTGGATTCTTTGCATTCTAA

Coding sequence (CDS)

ATGGCTTCTCAAACTGTTCTTGTTTTTGCTTTGATCTTCCTTGCCGCTGTTGCCGGAGTTTTTGCGGAGGCACCGACCGAATCTCCTTCAACATCTCCCTCACCTAAAGCTTCCCCATCGGACTCTGAATCGCCTTCACCGTCTTCTTCTTCTCCTGCAGGCTCTCCAAAGGCCTCACCTGAGACGACATCCCCATCCCCGGCAGCTTCTTCTCCATCTTCGTCCTCTGATGCTCCAACCAGCAATTCGCCCACCAGCTCTCCAACATCCTCCCCTTCCGTTTCTCCTTCTCCTGCCACTGACTCCCCCTCTGACTCTCCTGCTTCTGACTCTCCTGTTGCTGACTCTCCTGCTGACAGTCCTGCAGACACCCCGACTGCTGCTTCACCAGATTCCGATGTCTCTTCTCCTCCATCACCTGATGCCGCTGATGCCCCCACTGCTGATGGTCCTGCTGCTGCCGATGGCCCTACTGCCGCCGATGGCCCTACTGCCGCCGATGGCCCTGTTGCCGCCGATTCTCCTGCTGATTCACCCGCCAGTGACGAAAGCAGCGGTACAGATCTGAAACTCACCTCCGCCATGGTCGTTGGTGTCGTTGCCACTGTTGGATTCTTTGCATTCTAA

Protein sequence

MASQTVLVFALIFLAAVAGVFAEAPTESPSTSPSPKASPSDSESPSPSSSSPAGSPKASPETTSPSPAASSPSSSSDAPTSNSPTSSPTSSPSVSPSPATDSPSDSPASDSPVADSPADSPADTPTAASPDSDVSSPPSPDAADAPTADGPAAADGPTAADGPTAADGPVAADSPADSPASDESSGTDLKLTSAMVVGVVATVGFFAF
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G027460.1CsaV3_3G027460.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 29..50
score: 26.36
coord: 54..70
score: 38.82
coord: 71..88
score: 26.67
coord: 96..121
score: 30.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..190

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G027460CSPI03G25950Wild cucumber (PI 183967)cpicucB144
CsaV3_3G027460MELO3C014828Melon (DHL92) v3.5.1cucmeB250
CsaV3_3G027460ClCG05G013090Watermelon (Charleston Gray)cucwcgB240
CsaV3_3G027460Lsi05G004800Bottle gourd (USVL1VR-Ls)cuclsiB233
CsaV3_3G027460MELO3C014828.2Melon (DHL92) v3.6.1cucmedB233
The following gene(s) are paralogous to this gene:

None