CsaV3_3G027370 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G027370
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 23687314 .. 23688050 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCGAAGAAAAGGAAACCAGCCGGGTGGTGGTAACGCTCACCAACCAAAACGTGGAAGAAACCCCAATCCTCTCACTAAGATATTCAATGTTGTTATACTTGTAGATTAGCAAGGAAATTAGGTTTAGAAAAATGCGTAACTTATTTTTTTAGCCAGTCAGTTTATTTAATTTAGATATTAAAAAATATATAATTGTTAAATTAATTTTATTTTAAAATTTTATACAAATATATAAATAATTTTCAATCTTTAATAAGTTATTTTAGGAAAATTAGTTGTTTTAAAGTTTATTCTTTAAATTTTATTTGCTTATATATTTAGAACTTTTATAATTTTGTAATTCATATTATTTAATTTAGATAGTACAACAATATATTTTATATTTATATAAATATTAGATTACAAGTTTAGTCTCTAAAATTTTAAAACTGTATTTAATAAATCTCTAAATTTTAATTTTGTTTCTAATTGAGCCTTAAAATTTAAATTTAGTAAGCTATAGACTGTACACTATTTAACAAAGGAATCGAGGAATGAGTCCTCGGGAGGATCCATTTCCTCCATGGGGTCTTCACCTGATGATGCAATTCAAATAGCTTAAACTTCTATAACCTATTGTTCTAACTAGTTTAACGTTATAGTTTACTGTTATATTTGTTAGAACCAATGTTTTTAAAGGCTCAAGGCGCACTAAAGCGCATTGGTCATTTGGAGCCTAGGCGCAAGGCGCAA

mRNA sequence

ATGGCCCGAAGAAAAGGAAACCAGCCGGGTGGTGGTAACGCTCACCAACCAAAACGTGGAAGAAACCCCAATCCTCTCACTAAGATATTCAATACTGTACACTATTTAACAAAGGAATCGAGGAATGAGTCCTCGGGAGGATCCATTTCCTCCATGGGGTCTTCACCTGATGATGCAATTCAAATAGCTTAA

Coding sequence (CDS)

ATGGCCCGAAGAAAAGGAAACCAGCCGGGTGGTGGTAACGCTCACCAACCAAAACGTGGAAGAAACCCCAATCCTCTCACTAAGATATTCAATACTGTACACTATTTAACAAAGGAATCGAGGAATGAGTCCTCGGGAGGATCCATTTCCTCCATGGGGTCTTCACCTGATGATGCAATTCAAATAGCTTAA

Protein sequence

MARRKGNQPGGGNAHQPKRGRNPNPLTKIFNTVHYLTKESRNESSGGSISSMGSSPDDAIQIA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G027370.1CsaV3_3G027370.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..63

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G027370Cucumber (Chinese Long) v3cuccucB017
CsaV3_3G027370Silver-seed gourdcarcucB0399
CsaV3_3G027370Silver-seed gourdcarcucB0467
CsaV3_3G027370Cucumber (Gy14) v2cgybcucB026
CsaV3_3G027370Cucumber (Gy14) v2cgybcucB117
CsaV3_3G027370Cucumber (Gy14) v1cgycucB235
CsaV3_3G027370Cucurbita maxima (Rimu)cmacucB0085
CsaV3_3G027370Cucurbita maxima (Rimu)cmacucB0146
CsaV3_3G027370Cucurbita maxima (Rimu)cmacucB0148
CsaV3_3G027370Cucurbita maxima (Rimu)cmacucB0292
CsaV3_3G027370Cucurbita moschata (Rifu)cmocucB0074
CsaV3_3G027370Cucurbita moschata (Rifu)cmocucB0128
CsaV3_3G027370Cucurbita moschata (Rifu)cmocucB0126
CsaV3_3G027370Cucurbita moschata (Rifu)cmocucB0284
CsaV3_3G027370Cucurbita pepo (Zucchini)cpecucB0457
CsaV3_3G027370Cucurbita pepo (Zucchini)cpecucB0760
CsaV3_3G027370Cucurbita pepo (Zucchini)cpecucB0837
CsaV3_3G027370Cucurbita pepo (Zucchini)cpecucB0844
CsaV3_3G027370Wild cucumber (PI 183967)cpicucB028
CsaV3_3G027370Wild cucumber (PI 183967)cpicucB144
CsaV3_3G027370Bottle gourd (USVL1VR-Ls)cuclsiB233
CsaV3_3G027370Bottle gourd (USVL1VR-Ls)cuclsiB247
CsaV3_3G027370Melon (DHL92) v3.5.1cucmeB196
CsaV3_3G027370Melon (DHL92) v3.5.1cucmeB250
CsaV3_3G027370Melon (DHL92) v3.6.1cucmedB187
CsaV3_3G027370Melon (DHL92) v3.6.1cucmedB233
CsaV3_3G027370Watermelon (Charleston Gray)cucwcgB240
CsaV3_3G027370Watermelon (Charleston Gray)cucwcgB255
CsaV3_3G027370Watermelon (97103) v1cucwmB289
CsaV3_3G027370Watermelon (97103) v2cucwmbB219
CsaV3_3G027370Watermelon (97103) v2cucwmbB234
CsaV3_3G027370Wax gourdcucwgoB289