CsaV3_3G026340 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G026340
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 22457683 .. 22457867 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGCTTCCCGGGCTAGAAATAGAAACGTCTGAAGTTGGATCTATTTCTCCGTGAATGTGGCCTGATATGAACATTGAATTTGAAGAGTCTCCAGGTTGGTTTGTGGAGCAGATCACACTATTTTTAAAGAAAGGTCGAATTTCTTCCTTTTCTGCAAACTTGATTTTGGTGGGCTTGGGTAA

mRNA sequence

ATGAGGCTTCCCGGGCTAGAAATAGAAACGTCTGAAGTTGGATCTATTTCTCCAGTCTCCAGGTTGGTTTGTGGAGCAGATCACACTATTTTTAAAGAAAGGTCGAATTTCTTCCTTTTCTGCAAACTTGATTTTGGTGGGCTTGGGTAA

Coding sequence (CDS)

ATGAGGCTTCCCGGGCTAGAAATAGAAACGTCTGAAGTTGGATCTATTTCTCCAGTCTCCAGGTTGGTTTGTGGAGCAGATCACACTATTTTTAAAGAAAGGTCGAATTTCTTCCTTTTCTGCAAACTTGATTTTGGTGGGCTTGGGTAA

Protein sequence

MRLPGLEIETSEVGSISPVSRLVCGADHTIFKERSNFFLFCKLDFGGLG
Homology
[Close]
BLAST of CsaV3_3G026340 vs. NCBI nr
Match: KGN58108.1 (hypothetical protein Csa_3G514980 [Cucumis sativus])

HSP 1 Score: 105.9 bits (263), Expect = 4.0e-20
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MRLPGLEIETSEVGSISPVSRLVCGADHTIFKERSNFFLFCKLDFGGLG 50
          MRLPGLEIETSEVGSISPVSRLVCGADHTIFKERSNFFLFCKLDFGGLG
Sbjct: 1  MRLPGLEIETSEVGSISPVSRLVCGADHTIFKERSNFFLFCKLDFGGLG 49

[Close]
BLAST of CsaV3_3G026340 vs. TrEMBL
Match: tr|A0A0A0L8H8|A0A0A0L8H8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G514980 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.6e-20
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0 

Query: 1  MRLPGLEIETSEVGSISPVSRLVCGADHTIFKERSNFFLFCKLDFGGLG 50
          MRLPGLEIETSEVGSISPVSRLVCGADHTIFKERSNFFLFCKLDFGGLG
Sbjct: 1  MRLPGLEIETSEVGSISPVSRLVCGADHTIFKERSNFFLFCKLDFGGLG 49

The following BLAST results are available for this feature:
BLAST of CsaV3_3G026340 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58108.14.0e-20100.00hypothetical protein Csa_3G514980 [Cucumis sativus][more]
BLAST of CsaV3_3G026340 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G026340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G026340 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L8H8|A0A0A0L8H8_CUCSA2.6e-20100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G514980 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G026340.1CsaV3_3G026340.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G026340Cucumber (Gy14) v2cgybcucB117
CsaV3_3G026340Cucumber (Gy14) v1cgycucB464
CsaV3_3G026340Wild cucumber (PI 183967)cpicucB144
CsaV3_3G026340Watermelon (Charleston Gray)cucwcgB240
CsaV3_3G026340Watermelon (97103) v1cucwmB246
CsaV3_3G026340Watermelon (97103) v2cucwmbB210
CsaV3_3G026340Wax gourdcucwgoB318