CsaV3_3G023190 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G023190
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 20736645 .. 20737088 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCTTTTAGGTGTCACTCAGTCCTCACTTCCTTCCGTTCCGCCTCGGCCTCTCCCTCGCGTTGCCTTGCTTTTGCCTTCGCCTCTCCCTCATGCAACCTCCGGCATCTCCTCCTCCGTCTCAGCTCAGGCATGCACAACTGTTTGCCTCCACCTCTCCCTCACGCAACCTCCACATCTCCTCCGGCGTCTCAGCTCTTCAACGTCTCCTCCTTTGTCAAAGCTCTTTGGCGTCTCCTTCTCCATCTCAGATCCGTTTCGTCAGAACCCAAGACCCGTCCGTTTTGTCCAAACCCGAGACGGTGAGACCCGTCCGTTCCGTCTGTCTTCGATCTTAACCTTTGCAAGCTGATCTCATATCTCAATCCCTCCTCCGTCTCCAATCTCTAACTCTTCTTTGTCTCTGAGACCTGTCCGTTCGTCTCCTCCGCAGGCCAACCCGTT

mRNA sequence

ATGCAACCTCCGGCATCTCCTCCTCCGTCTCAGCTCAGGCATGCACAACTGTTTGCCTCCACCTCTCCCTCACGCAACCTCCACATCTCCTCCGGCGTCTCAGCTCTTCAACGTCTCCTCCTTTGTCAAAGCTCTTTGGCGTCTCCTTCTCCATCTCAGATCCGTTTCGTCAGAACCCAAGACCCGTCCGTTTTGTCCAAACCCGAGACGGTGAGACCCGTCCGTTCCGTCTGTCTTCGATCTTAA

Coding sequence (CDS)

ATGCAACCTCCGGCATCTCCTCCTCCGTCTCAGCTCAGGCATGCACAACTGTTTGCCTCCACCTCTCCCTCACGCAACCTCCACATCTCCTCCGGCGTCTCAGCTCTTCAACGTCTCCTCCTTTGTCAAAGCTCTTTGGCGTCTCCTTCTCCATCTCAGATCCGTTTCGTCAGAACCCAAGACCCGTCCGTTTTGTCCAAACCCGAGACGGTGAGACCCGTCCGTTCCGTCTGTCTTCGATCTTAA

Protein sequence

MQPPASPPPSQLRHAQLFASTSPSRNLHISSGVSALQRLLLCQSSLASPSPSQIRFVRTQDPSVLSKPETVRPVRSVCLRS
Homology
[Close]
BLAST of CsaV3_3G023190 vs. NCBI nr
Match: KGN57994.1 (hypothetical protein Csa_3G423820 [Cucumis sativus])

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1  MQPPASPPPSQLRHAQLFASTSPSRNLHISSGVSALQRLLLCQSSLASPSPSQIRFVRTQ 60
          MQPPASPPPSQLRHAQLFASTSPSRNLHISSGVSALQRLLLCQSSLASPSPSQIRFVRTQ
Sbjct: 1  MQPPASPPPSQLRHAQLFASTSPSRNLHISSGVSALQRLLLCQSSLASPSPSQIRFVRTQ 60

Query: 61 DPSVLSKPETVRPVRSVCLRS 82
          DPSVLSKPETVRPVRSVCLRS
Sbjct: 61 DPSVLSKPETVRPVRSVCLRS 81

[Close]
BLAST of CsaV3_3G023190 vs. TrEMBL
Match: tr|A0A0A0LAP7|A0A0A0LAP7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G423820 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.1e-35
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1  MQPPASPPPSQLRHAQLFASTSPSRNLHISSGVSALQRLLLCQSSLASPSPSQIRFVRTQ 60
          MQPPASPPPSQLRHAQLFASTSPSRNLHISSGVSALQRLLLCQSSLASPSPSQIRFVRTQ
Sbjct: 1  MQPPASPPPSQLRHAQLFASTSPSRNLHISSGVSALQRLLLCQSSLASPSPSQIRFVRTQ 60

Query: 61 DPSVLSKPETVRPVRSVCLRS 82
          DPSVLSKPETVRPVRSVCLRS
Sbjct: 61 DPSVLSKPETVRPVRSVCLRS 81

The following BLAST results are available for this feature:
BLAST of CsaV3_3G023190 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57994.11.2e-34100.00hypothetical protein Csa_3G423820 [Cucumis sativus][more]
BLAST of CsaV3_3G023190 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G023190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G023190 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LAP7|A0A0A0LAP7_CUCSA8.1e-35100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G423820 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G023190.1CsaV3_3G023190.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G023190Cucumber (Chinese Long) v3cuccucB135
CsaV3_3G023190Silver-seed gourdcarcucB0941
CsaV3_3G023190Silver-seed gourdcarcucB1059
CsaV3_3G023190Cucumber (Gy14) v2cgybcucB117
CsaV3_3G023190Cucurbita maxima (Rimu)cmacucB0022
CsaV3_3G023190Cucurbita maxima (Rimu)cmacucB0549
CsaV3_3G023190Cucurbita moschata (Rifu)cmocucB0010
CsaV3_3G023190Cucurbita moschata (Rifu)cmocucB0534
CsaV3_3G023190Cucurbita pepo (Zucchini)cpecucB0688
CsaV3_3G023190Cucurbita pepo (Zucchini)cpecucB0965
CsaV3_3G023190Wild cucumber (PI 183967)cpicucB144
CsaV3_3G023190Bottle gourd (USVL1VR-Ls)cuclsiB211
CsaV3_3G023190Bottle gourd (USVL1VR-Ls)cuclsiB213
CsaV3_3G023190Melon (DHL92) v3.5.1cucmeB207
CsaV3_3G023190Melon (DHL92) v3.6.1cucmedB200
CsaV3_3G023190Watermelon (Charleston Gray)cucwcgB231
CsaV3_3G023190Watermelon (Charleston Gray)cucwcgB242
CsaV3_3G023190Watermelon (97103) v1cucwmB191
CsaV3_3G023190Watermelon (97103) v1cucwmB257
CsaV3_3G023190Watermelon (97103) v2cucwmbB213
CsaV3_3G023190Watermelon (97103) v2cucwmbB221
CsaV3_3G023190Wax gourdcucwgoB350
CsaV3_3G023190Wax gourdcucwgoB353