CsaV3_3G022720 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G022720
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionprotein SRG1-like
Locationchr3 : 20199816 .. 20201936 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAAATCAAAATTTTTTCCCAAATCAAAAACCCTCACTCATGCGAAGAAGCCATCTCCAAATGCAAAGAAGGCCATATTCGGACGATGTCCGATCCCATCACCGCCACTGCCCCTCGTGTCCAAATCTCCATGATTGCATCTCCAACTTCCGCTCCGATGATACAATGGACTCCGAATTGTCTCGCCATCACTCTGCTTGCAAAAATTGAGGATTCTTTCAGGTTTATAATATCTCTTATCTCTTTGTTTCAATGTGTTTAATTGAGAACAAAAATCTGAAAATAATTGGTGAATTTAATTATAGTTGGTGAAGCACGGAGTGAGCGATTCGTTGATGGAGAGAATGAGCGATTCGTTGATGGAGAGAATGAAGATGGAAACGCAGAAATTGTTCCAACTTCTGATTGAAGAGAAGAAAAAGCTACGGCAGAGAGAAGGTGATGTGGAGGGGTTTGGACACGCTTTCATTACAAGTGAAGAACATAAATTGGATTGGTGTGATATTTTCTTCATTGCTACATCGCCTTTACATTTCAGGAATCCCCGATTGTTTCAAAATCTCCCTCTCTCTTTGAGGTTCGATCATTCCTTACATTACAAAACTTTTTAAATGATTCTCAAACTCATAAAATCCTAGAAATTAAACTCTGAACTCATAAATATAAAACGATTCTAATTTCTTATTCATGGTACTTCACCGTCTAGGAATGGAATAAGAAAAAGAGAATATGATTTTCTATTTCAAGAATTTGATATAGTTCTGTCATACTAGCGTTTTTGGCTTGGGGGTATACTTTCAACTGTTACCCACATTCCCATTGGTCTTAAATCAGTCTACCCACAATGTCTAAGGATCAGATATGCAATTTTGAATTTTCTTAAATGTCGTTCAACAAGGTTTGGAGTCCTTTTGGGTAAGAGTCGGTAAGTATATTTGTTTTATTTTCCATTTAGAATTGGAGTTAAATGTTTGAATGATATGGTGAACCGTTTAAGCCCTTTAGTTGTTATGTTTGGGTGAATTTTGAAGTATTGCACTAAATGCTTTGAACTGTTTTAGAATAGATTAAATTGTATTAGATTAGTTTTTAACTTGTGAAGGCTTGCTTAATAACCTTATCTTCCCCACAGGTAACTAAGCATAGCTGCTTGTTTGCATATGAAAAGGCAAGATCATTGACACTGCCAACATGAGCCTCAATCTGTATTTAAAAGTTAAACAAGAAAAGAACGTCAATCACCAAAATTATGCAAACAAGATTAGGATTGAGAAGTTCCAATTGGATACTGAAAGTACAAAGTAAAAAATGATCAAGATTCCCCCCCAACACAAATGATCTAAGTGGTTTCTTAATTCATCACCAACCTGATAGGAATATATGTGCATGATATGCTTTGAATATGCAACACTTGGATGTTGAAAAGTAATCTAAACTAGTCAATTACCAATTTTTTTTAAATACGCTTCTATAACAAAACAACAGTTTCTCAAGAGTCTATCATTAGCATAAAGAACTAAAAGGGAAAAAAAAAAGAAAAAAAAAACAAAGATTGAACTCACCAAAAAGAGTTCCATCAGGGCTCCACATTACACGATTAATTGATATAGTATAATCACTGGCCAATGATGCCTAGAAGCAAACCAAAGAGTTCAGTATCTTAAAAGTGCATTTTCAGCTATAAATCTAACAAAAAATGTTTAATGGGAGTCCAACGCAACGCAACAGAAGCCAAATTTGTAAAGGCACTGAACATGTTGAAAGATTCCATACTTTAAAATTTCTAATAGCAATCCTTTCATGACCACCAACCTCCCAGATCATGACATCGCCCACATTTGTTCCAATTGAATTAAAAAATACGGTGAAATGAATGTGAGATATATATGCACTCTTATCCAGCATCTATAAGCCTAGTACAATCAACATGGAAACAAAAAGGGTGTTGATATTGCTTTTAAAACAAATTGGGACATACCAAGTAGTATAATTTGTTGTTGTGGATGAAAATTCATACTCTTAACACTAAGGTTGACCCAAAATAATATAAGGAAAGAGAAAAGAGAAAAATAATTAGCAAGATGCTTCTGGAAAACAGTGATAAAAAATCAAATATTATA

mRNA sequence

ATGGAGAGAATGAGCGATTCGTTGATGGAGAGAATGAAGATGGAAACGCAGAAATTGTTCCAACTTCTGATTGAAGAGAAGAAAAAGCTACGGCAGAGAGAAGGTGATGTGGAGGGGTTTGGACACGCTTTCATTACAAGTGAAGAACATAAATTGGATTGGTGTGATATTTTCTTCATTGCTACATCGCCTTTACATTTCAGGAATCCCCGATTGTTTCAAAATCTCCCTCTCTCTTTGAGCGTTTTTGGCTTGGGGGTATACTTTCAACTGTTACCCACATTCCCATTGGTCTTAAATCAGTCTACCCACAATGTCTAA

Coding sequence (CDS)

ATGGAGAGAATGAGCGATTCGTTGATGGAGAGAATGAAGATGGAAACGCAGAAATTGTTCCAACTTCTGATTGAAGAGAAGAAAAAGCTACGGCAGAGAGAAGGTGATGTGGAGGGGTTTGGACACGCTTTCATTACAAGTGAAGAACATAAATTGGATTGGTGTGATATTTTCTTCATTGCTACATCGCCTTTACATTTCAGGAATCCCCGATTGTTTCAAAATCTCCCTCTCTCTTTGAGCGTTTTTGGCTTGGGGGTATACTTTCAACTGTTACCCACATTCCCATTGGTCTTAAATCAGTCTACCCACAATGTCTAA

Protein sequence

MERMSDSLMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATSPLHFRNPRLFQNLPLSLSVFGLGVYFQLLPTFPLVLNQSTHNV
Homology
[Close]
BLAST of CsaV3_3G022720 vs. NCBI nr
Match: XP_004146011.2 (PREDICTED: protein SRG1-like [Cucumis sativus])

HSP 1 Score: 140.2 bits (352), Expect = 4.1e-30
Identity = 70/77 (90.91%), Postives = 73/77 (94.81%), Query Frame = 0 

Query: 4   MSDSLMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATS 63
           +SDSLMERMKMETQKLFQL IEEKKKL QREGDVEGFG AF+TSEEHKL+WCDIFFIATS
Sbjct: 92  VSDSLMERMKMETQKLFQLPIEEKKKLWQREGDVEGFGQAFVTSEEHKLNWCDIFFIATS 151

Query: 64  PLHFRNPRLFQNLPLSL 81
           PL FRNPRLFQNLPLSL
Sbjct: 152 PLKFRNPRLFQNLPLSL 168

[Close]
BLAST of CsaV3_3G022720 vs. NCBI nr
Match: XP_008463796.1 (PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Cucumis melo])

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-28
Identity = 67/77 (87.01%), Postives = 71/77 (92.21%), Query Frame = 0 

Query: 4   MSDSLMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATS 63
           +SDSL+ERMKMETQKLF+L IEEKKKL QREGDVEGFG AF+TSEE KLDWCDIFFIAT 
Sbjct: 91  VSDSLVERMKMETQKLFELPIEEKKKLWQREGDVEGFGQAFVTSEEQKLDWCDIFFIATL 150

Query: 64  PLHFRNPRLFQNLPLSL 81
           PLHFR PRLFQNLPLSL
Sbjct: 151 PLHFRKPRLFQNLPLSL 167

[Close]
BLAST of CsaV3_3G022720 vs. NCBI nr
Match: XP_023534939.1 (protein SRG1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 110.5 bits (275), Expect = 3.5e-21
Identity = 54/76 (71.05%), Postives = 60/76 (78.95%), Query Frame = 0 

Query: 4   MSDSLMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATS 63
           +SD LME+MK ETQ  F L IEEKKKL Q E D EGFG AF+ SEE KLDWCD+FFIAT+
Sbjct: 90  VSDLLMEKMKAETQMFFNLPIEEKKKLWQSEEDAEGFGQAFVVSEEQKLDWCDLFFIATA 149

Query: 64  PLHFRNPRLFQNLPLS 80
           P H R PRLFQNLPL+
Sbjct: 150 PPHLRKPRLFQNLPLA 165

[Close]
BLAST of CsaV3_3G022720 vs. NCBI nr
Match: XP_022935942.1 (protein SRG1-like [Cucurbita moschata])

HSP 1 Score: 106.7 bits (265), Expect = 5.0e-20
Identity = 54/77 (70.13%), Postives = 61/77 (79.22%), Query Frame = 0 

Query: 4   MSDSLMERMKMETQKLFQLLIEEKKK-LRQREGDVEGFGHAFITSEEHKLDWCDIFFIAT 63
           +SDSL+E+MK ETQ  F L IEEKKK L Q E D EGFG AF+ SEE KLDWCD+FFIAT
Sbjct: 89  VSDSLIEKMKAETQMFFNLPIEEKKKRLWQSEEDAEGFGQAFVVSEEQKLDWCDLFFIAT 148

Query: 64  SPLHFRNPRLFQNLPLS 80
           +P H R PRLFQNLPL+
Sbjct: 149 APPHLRKPRLFQNLPLA 165

[Close]
BLAST of CsaV3_3G022720 vs. NCBI nr
Match: XP_022131763.1 (protein SRG1-like [Momordica charantia])

HSP 1 Score: 102.4 bits (254), Expect = 9.5e-19
Identity = 49/71 (69.01%), Postives = 59/71 (83.10%), Query Frame = 0 

Query: 9   MERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATSPLHFR 68
           +E+M++ETQ+ F+L IEE+KKL Q EGDVEGFG AF+ SEE KLDW DIFF+ T+P H R
Sbjct: 131 IEKMRIETQEFFKLPIEERKKLWQIEGDVEGFGQAFVVSEEQKLDWSDIFFLCTAPEHQR 190

Query: 69  NPRLFQNLPLS 80
            PRLFQNLPLS
Sbjct: 191 KPRLFQNLPLS 201

[Close]
BLAST of CsaV3_3G022720 vs. TAIR10
Match: AT4G25310.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 81.6 bits (200), Expect = 3.1e-16
Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 0 

Query: 9   MERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATSPLHFR 68
           +++ K + Q  F L +EEKKKL Q+ GD+EGFG AF+ SEE KLDW D+FF+   P+  R
Sbjct: 92  LDKFKSDIQDFFNLPMEEKKKLWQQPGDIEGFGQAFVFSEEQKLDWADVFFLTMQPVPLR 151

Query: 69  NPRLFQNLPL 79
            P LF  LPL
Sbjct: 152 KPHLFPKLPL 161

[Close]
BLAST of CsaV3_3G022720 vs. TAIR10
Match: AT1G17020.1 (senescence-related gene 1)

HSP 1 Score: 79.0 bits (193), Expect = 2.0e-15
Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 0 

Query: 4   MSDSLMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATS 63
           +  S ++++K E Q  F L +EEKKK  QR  ++EGFG AF+ SE+ KLDW D+FF    
Sbjct: 91  IDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQ 150

Query: 64  PLHFRNPRLFQNLPL 79
           P+  R P LF  LPL
Sbjct: 151 PVELRKPHLFPKLPL 165

[Close]
BLAST of CsaV3_3G022720 vs. TAIR10
Match: AT4G25300.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 79.0 bits (193), Expect = 2.0e-15
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 0 

Query: 4   MSDSLMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATS 63
           M  S + ++K E Q  F L +EEKK L Q+  ++EGFG  F+ SEE KLDW D+FF+   
Sbjct: 90  MESSFLNKVKSEVQDFFNLPMEEKKNLWQQPDEIEGFGQVFVVSEEQKLDWADMFFLTMQ 149

Query: 64  PLHFRNPRLFQNLPL 79
           P+  R P LF  LPL
Sbjct: 150 PVRLRKPHLFPKLPL 164

[Close]
BLAST of CsaV3_3G022720 vs. TAIR10
Match: AT1G17010.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 73.2 bits (178), Expect = 1.1e-13
Identity = 35/72 (48.61%), Postives = 46/72 (63.89%), Query Frame = 0 

Query: 7   SLMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATSPLH 66
           S ++++K E Q  F L +EEKKKL Q    +EGFG AF+ SE+ KLDW D+FF+   P+ 
Sbjct: 95  SFLDKIKSEIQDFFNLPMEEKKKLWQTPAVMEGFGQAFVVSEDQKLDWADLFFLIMQPVQ 154

Query: 67  FRNPRLFQNLPL 79
            R   LF  LPL
Sbjct: 155 LRKRHLFPKLPL 166

[Close]
BLAST of CsaV3_3G022720 vs. TAIR10
Match: AT1G78550.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein)

HSP 1 Score: 70.1 bits (170), Expect = 9.4e-13
Identity = 33/74 (44.59%), Postives = 46/74 (62.16%), Query Frame = 0 

Query: 4   MSDSLMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATS 63
           +  S +E+++ E Q+ F L ++EK+KL QR G+ EGFG   I SE  KLDW D+F + T 
Sbjct: 91  IDSSFLEKLETEVQEFFNLPMKEKQKLWQRSGEFEGFGQVNIVSENQKLDWGDMFILTTE 150

Query: 64  PLHFRNPRLFQNLP 78
           P+  R   LF  LP
Sbjct: 151 PIRSRKSHLFSKLP 164

[Close]
BLAST of CsaV3_3G022720 vs. Swiss-Prot
Match: sp|D4N501|DIOX2_PAPSO (Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum OX=3469 GN=DIOX2 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.5e-15
Identity = 40/74 (54.05%), Postives = 49/74 (66.22%), Query Frame = 0 

Query: 7   SLMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATSPLH 66
           SL++ +K + Q  F L + EK K  Q++GDVEGFG AF+ SE+  LDW DIF I T PLH
Sbjct: 98  SLVDNVKSDIQGFFNLSMNEKIKYGQKDGDVEGFGQAFVASEDQTLDWADIFMILTLPLH 157

Query: 67  FRNPRLFQNLPLSL 81
            R P LF  LPL L
Sbjct: 158 LRKPHLFSKLPLPL 171

[Close]
BLAST of CsaV3_3G022720 vs. Swiss-Prot
Match: sp|D4N500|DIOX1_PAPSO (Thebaine 6-O-demethylase OS=Papaver somniferum OX=3469 GN=T6ODM PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 9.6e-15
Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 0 

Query: 7   SLMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATSPLH 66
           SL++ +K E Q  F L ++EK K  Q +GDVEGFG  FI SE+  LDW DIF + T PLH
Sbjct: 98  SLVDSVKSEIQGFFNLSMDEKTKYEQEDGDVEGFGQGFIESEDQTLDWADIFMMFTLPLH 157

Query: 67  FRNPRLFQNLPLSL 81
            R P LF  LP+ L
Sbjct: 158 LRKPHLFSKLPVPL 171

[Close]
BLAST of CsaV3_3G022720 vs. Swiss-Prot
Match: sp|Q39224|SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana OX=3702 GN=SRG1 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.7e-14
Identity = 36/75 (48.00%), Postives = 48/75 (64.00%), Query Frame = 0 

Query: 4   MSDSLMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATS 63
           +  S ++++K E Q  F L +EEKKK  QR  ++EGFG AF+ SE+ KLDW D+FF    
Sbjct: 91  IDSSFLDKVKSEIQDFFNLPMEEKKKFWQRPDEIEGFGQAFVVSEDQKLDWADLFFHTVQ 150

Query: 64  PLHFRNPRLFQNLPL 79
           P+  R P LF  LPL
Sbjct: 151 PVELRKPHLFPKLPL 165

[Close]
BLAST of CsaV3_3G022720 vs. Swiss-Prot
Match: sp|D4N502|DIOX3_PAPSO (Codeine O-demethylase OS=Papaver somniferum OX=3469 GN=CODM PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 7.6e-12
Identity = 33/71 (46.48%), Postives = 46/71 (64.79%), Query Frame = 0 

Query: 8   LMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATSPLHF 67
           LM+ +K E +  F L + EK K  Q++GD EGFG  +I SE+ +LDW ++F + + PLH 
Sbjct: 98  LMDNIKSEIKGFFNLPMNEKTKYGQQDGDFEGFGQPYIESEDQRLDWTEVFSMLSLPLHL 157

Query: 68  RNPRLFQNLPL 79
           R P LF  LPL
Sbjct: 158 RKPHLFPELPL 168

[Close]
BLAST of CsaV3_3G022720 vs. Swiss-Prot
Match: sp|A2A1A0|NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica OX=3442 GN=NCS1 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-11
Identity = 32/74 (43.24%), Postives = 48/74 (64.86%), Query Frame = 0 

Query: 6   DSLMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATSPL 65
           + ++E+MK++T+  F+L  +EK   RQ    +EG+G AF+TSEE KLDW D+ F+ T P+
Sbjct: 91  EEVIEKMKVDTEDFFRLPFKEKNAYRQLPNGMEGYGQAFVTSEEQKLDWADMHFLITKPV 150

Query: 66  HFRNPRLFQNLPLS 80
             RN R +   P S
Sbjct: 151 QERNMRFWPTSPTS 164

[Close]
BLAST of CsaV3_3G022720 vs. TrEMBL
Match: tr|A0A1S3CK11|A0A1S3CK11_CUCME (probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Cucumis melo OX=3656 GN=LOC103501850 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 8.7e-29
Identity = 67/77 (87.01%), Postives = 71/77 (92.21%), Query Frame = 0 

Query: 4   MSDSLMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATS 63
           +SDSL+ERMKMETQKLF+L IEEKKKL QREGDVEGFG AF+TSEE KLDWCDIFFIAT 
Sbjct: 91  VSDSLVERMKMETQKLFELPIEEKKKLWQREGDVEGFGQAFVTSEEQKLDWCDIFFIATL 150

Query: 64  PLHFRNPRLFQNLPLSL 81
           PLHFR PRLFQNLPLSL
Sbjct: 151 PLHFRKPRLFQNLPLSL 167

[Close]
BLAST of CsaV3_3G022720 vs. TrEMBL
Match: tr|A0A1R3JCT5|A0A1R3JCT5_9ROSI (Oxoglutarate/iron-dependent dioxygenase OS=Corchorus olitorius OX=93759 GN=COLO4_17462 PE=3 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.6e-17
Identity = 48/77 (62.34%), Postives = 57/77 (74.03%), Query Frame = 0 

Query: 4   MSDSLMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATS 63
           +S SL+E+ K E Q LF L +EEKKKL Q EG++EGFG +F+ SEE KLDW D+FFI T 
Sbjct: 89  VSPSLLEKAKKEIQDLFNLPMEEKKKLWQTEGEIEGFGQSFVVSEEQKLDWGDLFFINTL 148

Query: 64  PLHFRNPRLFQNLPLSL 81
           PLHFR P LF  LPL L
Sbjct: 149 PLHFRKPHLFPKLPLPL 165

[Close]
BLAST of CsaV3_3G022720 vs. TrEMBL
Match: tr|F6GVD6|F6GVD6_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g00960 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.4e-17
Identity = 46/75 (61.33%), Postives = 57/75 (76.00%), Query Frame = 0 

Query: 4   MSDSLMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATS 63
           +S SL+E++K ETQ+ F L +EEKKK  Q+ G+VEGFG AF+ SEE KLDW DIFF++T 
Sbjct: 90  VSSSLVEKVKAETQEFFNLPLEEKKKFWQKPGEVEGFGQAFVVSEEQKLDWGDIFFMSTL 149

Query: 64  PLHFRNPRLFQNLPL 79
           P HFR P LF  LPL
Sbjct: 150 PTHFRKPHLFPKLPL 164

[Close]
BLAST of CsaV3_3G022720 vs. TrEMBL
Match: tr|A0A1U8M4D6|A0A1U8M4D6_GOSHI (protein SRG1-like OS=Gossypium hirsutum OX=3635 GN=LOC107933878 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.9e-17
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 0 

Query: 8   LMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATSPLHF 67
           L+E++K E ++ F+L +EEKKKL Q  GDVEGFG AF+ SE  KLDWCD+F + T PLH 
Sbjct: 97  LLEKVKAELEEFFKLPMEEKKKLWQCPGDVEGFGQAFVVSEGQKLDWCDLFNMLTHPLHL 156

Query: 68  RNPRLFQNLPLSL 81
           RNPRLF NLPL L
Sbjct: 157 RNPRLFPNLPLPL 169

[Close]
BLAST of CsaV3_3G022720 vs. TrEMBL
Match: tr|A0A2P5WQI8|A0A2P5WQI8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA27320 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.9e-17
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 0 

Query: 8   LMERMKMETQKLFQLLIEEKKKLRQREGDVEGFGHAFITSEEHKLDWCDIFFIATSPLHF 67
           L+E++K E ++ F+L +EEKKKL Q  GDVEGFG AF+ SE  KLDWCD+F + T PLH 
Sbjct: 97  LLEKVKAELEEFFKLPMEEKKKLWQCPGDVEGFGQAFVVSEGQKLDWCDLFNMLTHPLHL 156

Query: 68  RNPRLFQNLPLSL 81
           RNPRLF NLPL L
Sbjct: 157 RNPRLFPNLPLPL 169

The following BLAST results are available for this feature:
BLAST of CsaV3_3G022720 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146011.24.1e-3090.91PREDICTED: protein SRG1-like [Cucumis sativus][more]
XP_008463796.11.3e-2887.01PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Cucumis melo][more]
XP_023534939.13.5e-2171.05protein SRG1-like [Cucurbita pepo subsp. pepo][more]
XP_022935942.15.0e-2070.13protein SRG1-like [Cucurbita moschata][more]
XP_022131763.19.5e-1969.01protein SRG1-like [Momordica charantia][more]
BLAST of CsaV3_3G022720 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G25310.13.1e-1652.862-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein[more]
AT1G17020.12.0e-1548.00senescence-related gene 1[more]
AT4G25300.12.0e-1548.002-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein[more]
AT1G17010.11.1e-1348.612-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein[more]
AT1G78550.19.4e-1344.592-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein[more]
BLAST of CsaV3_3G022720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|D4N501|DIOX2_PAPSO2.5e-1554.05Probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Papaver somniferum OX=34... [more]
sp|D4N500|DIOX1_PAPSO9.6e-1552.70Thebaine 6-O-demethylase OS=Papaver somniferum OX=3469 GN=T6ODM PE=1 SV=1[more]
sp|Q39224|SRG1_ARATH3.7e-1448.00Protein SRG1 OS=Arabidopsis thaliana OX=3702 GN=SRG1 PE=2 SV=1[more]
sp|D4N502|DIOX3_PAPSO7.6e-1246.48Codeine O-demethylase OS=Papaver somniferum OX=3469 GN=CODM PE=1 SV=1[more]
sp|A2A1A0|NCS1_COPJA1.7e-1143.24S-norcoclaurine synthase 1 OS=Coptis japonica OX=3442 GN=NCS1 PE=1 SV=1[more]
BLAST of CsaV3_3G022720 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CK11|A0A1S3CK11_CUCME8.7e-2987.01probable 2-oxoglutarate/Fe(II)-dependent dioxygenase OS=Cucumis melo OX=3656 GN=... [more]
tr|A0A1R3JCT5|A0A1R3JCT5_9ROSI2.6e-1762.34Oxoglutarate/iron-dependent dioxygenase OS=Corchorus olitorius OX=93759 GN=COLO4... [more]
tr|F6GVD6|F6GVD6_VITVI3.4e-1761.33Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g00960 PE=3 SV=... [more]
tr|A0A1U8M4D6|A0A1U8M4D6_GOSHI5.9e-1763.01protein SRG1-like OS=Gossypium hirsutum OX=3635 GN=LOC107933878 PE=3 SV=1[more]
tr|A0A2P5WQI8|A0A2P5WQI8_GOSBA5.9e-1763.01Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA27320 PE=3 SV... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR026992DIOX_N
IPR027443IPNS-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G022720.1CsaV3_3G022720.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
NoneNo IPR availablePANTHERPTHR10209:SF1682-OXOGLUTARATE 2OG AND FE II -DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATEDcoord: 4..80
NoneNo IPR availablePANTHERPTHR10209OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEINcoord: 4..80
NoneNo IPR availableSUPERFAMILYSSF51197Clavaminate synthase-likecoord: 5..77
IPR027443Isopenicillin N synthase-likeGENE3DG3DSA:2.60.120.330coord: 2..88
e-value: 3.4E-10
score: 41.6
IPR026992Non-haem dioxygenase N-terminal domainPFAMPF14226DIOX_Ncoord: 4..64
e-value: 4.5E-8
score: 33.7

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G022720Cucumber (Chinese Long) v3cuccucB112
CsaV3_3G022720Silver-seed gourdcarcucB0941
CsaV3_3G022720Silver-seed gourdcarcucB1059
CsaV3_3G022720Cucumber (Gy14) v2cgybcucB117
CsaV3_3G022720Cucumber (Gy14) v1cgycucB039
CsaV3_3G022720Cucurbita maxima (Rimu)cmacucB0022
CsaV3_3G022720Cucurbita maxima (Rimu)cmacucB0549
CsaV3_3G022720Cucurbita maxima (Rimu)cmacucB0710
CsaV3_3G022720Cucurbita moschata (Rifu)cmocucB0010
CsaV3_3G022720Cucurbita moschata (Rifu)cmocucB0534
CsaV3_3G022720Cucurbita pepo (Zucchini)cpecucB0688
CsaV3_3G022720Cucurbita pepo (Zucchini)cpecucB0965
CsaV3_3G022720Wild cucumber (PI 183967)cpicucB144
CsaV3_3G022720Bottle gourd (USVL1VR-Ls)cuclsiB213
CsaV3_3G022720Melon (DHL92) v3.5.1cucmeB207
CsaV3_3G022720Melon (DHL92) v3.6.1cucmedB200
CsaV3_3G022720Watermelon (Charleston Gray)cucwcgB242
CsaV3_3G022720Watermelon (97103) v1cucwmB257
CsaV3_3G022720Watermelon (97103) v2cucwmbB221
CsaV3_3G022720Wax gourdcucwgoB353