CsaV3_3G022130 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGAGACATCCCATCGAGTTTGTTGACGATAAAGCCTTAAGGTTAAGACAATTGTACCTTGGGGATAGGTCCAACATGAATGGATTGGAGTTGGATAAAGATTACTTGACTCTCACTTTTGAGAGCGATGAGGATGTCGTGAAGATATCGCTCTTCTACTTCGTTGAGTTGGCCATGATTGGGAGGGAGAGGAGGCAGCACATGGACTGGACCATGTTGGGTGTCATCGATGACCTCGAAGACTTTGTGAGCTATGATTGGGGTGAGCTTATATGA ATGCAGAGACATCCCATCGAGTTTGTTGACGATAAAGCCTTAAGGTTAAGACAATTGTACCTTGGGGATAGGTCCAACATGAATGGATTGGAGTTGGATAAAGATTACTTGACTCTCACTTTTGAGAGCGATGAGGATGTCGTGAAGATATCGCTCTTCTACTTCGTTGAGTTGGCCATGATTGGGAGGGAGAGGAGGCAGCACATGGACTGGACCATGTTGGGTGTCATCGATGACCTCGAAGACTTTGTGAGCTATGATTGGGGTGAGCTTATATGA ATGCAGAGACATCCCATCGAGTTTGTTGACGATAAAGCCTTAAGGTTAAGACAATTGTACCTTGGGGATAGGTCCAACATGAATGGATTGGAGTTGGATAAAGATTACTTGACTCTCACTTTTGAGAGCGATGAGGATGTCGTGAAGATATCGCTCTTCTACTTCGTTGAGTTGGCCATGATTGGGAGGGAGAGGAGGCAGCACATGGACTGGACCATGTTGGGTGTCATCGATGACCTCGAAGACTTTGTGAGCTATGATTGGGGTGAGCTTATATGA MQRHPIEFVDDKALRLRQLYLGDRSNMNGLELDKDYLTLTFESDEDVVKISLFYFVELAMIGRERRQHMDWTMLGVIDDLEDFVSYDWGELI
BLAST of CsaV3_3G022130 vs. NCBI nr
Match: KGN57895.1 (hypothetical protein Csa_3G379230 [Cucumis sativus]) HSP 1 Score: 191.8 bits (486), Expect = 1.0e-45 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CsaV3_3G022130 vs. NCBI nr
Match: XP_022157020.1 (uncharacterized protein LOC111023847 [Momordica charantia]) HSP 1 Score: 90.5 bits (223), Expect = 3.2e-15 Identity = 43/92 (46.74%), Postives = 65/92 (70.65%), Query Frame = 0
BLAST of CsaV3_3G022130 vs. NCBI nr
Match: XP_022154995.1 (uncharacterized protein LOC111022139 [Momordica charantia]) HSP 1 Score: 89.4 bits (220), Expect = 7.2e-15 Identity = 43/92 (46.74%), Postives = 64/92 (69.57%), Query Frame = 0
BLAST of CsaV3_3G022130 vs. NCBI nr
Match: XP_022154967.1 (uncharacterized protein LOC111022112 [Momordica charantia]) HSP 1 Score: 82.0 bits (201), Expect = 1.2e-12 Identity = 40/87 (45.98%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of CsaV3_3G022130 vs. NCBI nr
Match: XP_022153201.1 (uncharacterized protein LOC111020757 [Momordica charantia]) HSP 1 Score: 78.2 bits (191), Expect = 1.7e-11 Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 0
BLAST of CsaV3_3G022130 vs. TrEMBL
Match: tr|A0A0A0L7D5|A0A0A0L7D5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G379230 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 6.8e-46 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CsaV3_3G022130 vs. TrEMBL
Match: tr|A0A0A0LYA9|A0A0A0LYA9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701360 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.1e-06 Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 0
BLAST of CsaV3_3G022130 vs. TrEMBL
Match: tr|Q5GIT0|Q5GIT0_CUCME (Ulp1 peptidase-like OS=Cucumis melo OX=3656 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.1e-06 Identity = 29/87 (33.33%), Postives = 52/87 (59.77%), Query Frame = 0
BLAST of CsaV3_3G022130 vs. TrEMBL
Match: tr|Q5GIS9|Q5GIS9_CUCME (Ulp1 peptidase-like OS=Cucumis melo OX=3656 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 2.0e-05 Identity = 23/61 (37.70%), Postives = 42/61 (68.85%), Query Frame = 0
BLAST of CsaV3_3G022130 vs. TrEMBL
Match: tr|A0A0A0LN40|A0A0A0LN40_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G428980 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 7.6e-05 Identity = 24/33 (72.73%), Postives = 30/33 (90.91%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |