CsaV3_3G022130 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G022130
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUlp1 peptidase-like
Locationchr3 : 19283058 .. 19283336 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGAGACATCCCATCGAGTTTGTTGACGATAAAGCCTTAAGGTTAAGACAATTGTACCTTGGGGATAGGTCCAACATGAATGGATTGGAGTTGGATAAAGATTACTTGACTCTCACTTTTGAGAGCGATGAGGATGTCGTGAAGATATCGCTCTTCTACTTCGTTGAGTTGGCCATGATTGGGAGGGAGAGGAGGCAGCACATGGACTGGACCATGTTGGGTGTCATCGATGACCTCGAAGACTTTGTGAGCTATGATTGGGGTGAGCTTATATGA

mRNA sequence

ATGCAGAGACATCCCATCGAGTTTGTTGACGATAAAGCCTTAAGGTTAAGACAATTGTACCTTGGGGATAGGTCCAACATGAATGGATTGGAGTTGGATAAAGATTACTTGACTCTCACTTTTGAGAGCGATGAGGATGTCGTGAAGATATCGCTCTTCTACTTCGTTGAGTTGGCCATGATTGGGAGGGAGAGGAGGCAGCACATGGACTGGACCATGTTGGGTGTCATCGATGACCTCGAAGACTTTGTGAGCTATGATTGGGGTGAGCTTATATGA

Coding sequence (CDS)

ATGCAGAGACATCCCATCGAGTTTGTTGACGATAAAGCCTTAAGGTTAAGACAATTGTACCTTGGGGATAGGTCCAACATGAATGGATTGGAGTTGGATAAAGATTACTTGACTCTCACTTTTGAGAGCGATGAGGATGTCGTGAAGATATCGCTCTTCTACTTCGTTGAGTTGGCCATGATTGGGAGGGAGAGGAGGCAGCACATGGACTGGACCATGTTGGGTGTCATCGATGACCTCGAAGACTTTGTGAGCTATGATTGGGGTGAGCTTATATGA

Protein sequence

MQRHPIEFVDDKALRLRQLYLGDRSNMNGLELDKDYLTLTFESDEDVVKISLFYFVELAMIGRERRQHMDWTMLGVIDDLEDFVSYDWGELI
BLAST of CsaV3_3G022130 vs. NCBI nr
Match: KGN57895.1 (hypothetical protein Csa_3G379230 [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 1.0e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0

Query: 1  MQRHPIEFVDDKALRLRQLYLGDRSNMNGLELDKDYLTLTFESDEDVVKISLFYFVELAM 60
          MQRHPIEFVDDKALRLRQLYLGDRSNMNGLELDKDYLTLTFESDEDVVKISLFYFVELAM
Sbjct: 1  MQRHPIEFVDDKALRLRQLYLGDRSNMNGLELDKDYLTLTFESDEDVVKISLFYFVELAM 60

Query: 61 IGRERRQHMDWTMLGVIDDLEDFVSYDWGELI 93
          IGRERRQHMDWTMLGVIDDLEDFVSYDWGELI
Sbjct: 61 IGRERRQHMDWTMLGVIDDLEDFVSYDWGELI 92

BLAST of CsaV3_3G022130 vs. NCBI nr
Match: XP_022157020.1 (uncharacterized protein LOC111023847 [Momordica charantia])

HSP 1 Score: 90.5 bits (223), Expect = 3.2e-15
Identity = 43/92 (46.74%), Postives = 65/92 (70.65%), Query Frame = 0

Query: 3   RHPIEFVDD--KALRLRQLYLGDRSNMNGLELDKDYLTLTFESDEDVVKISLFYFVELAM 62
           RH +  VD+  +  RLR LY  D++++   EL+K +L  TFE+DED VKI++ YF+ELAM
Sbjct: 101 RHTMNRVDEDVRNRRLRILYFQDKASVKCSELEKIFLEHTFENDEDAVKIAIVYFIELAM 160

Query: 63  IGRERRQHMDWTMLGVIDDLEDFVSYDWGELI 93
           +G+ER+  MD ++LG++D  E F +YDW  +I
Sbjct: 161 MGKERKLKMDTSLLGIVDRWEVFCNYDWSSMI 192

BLAST of CsaV3_3G022130 vs. NCBI nr
Match: XP_022154995.1 (uncharacterized protein LOC111022139 [Momordica charantia])

HSP 1 Score: 89.4 bits (220), Expect = 7.2e-15
Identity = 43/92 (46.74%), Postives = 64/92 (69.57%), Query Frame = 0

Query: 3   RHPIEFVDDKA--LRLRQLYLGDRSNMNGLELDKDYLTLTFESDEDVVKISLFYFVELAM 62
           RH +  V D     RLR LY  D++++   EL+K +L  TF++DED VKI++ YF+ELAM
Sbjct: 138 RHTMNRVYDDVHNRRLRILYFQDKASVKCSELEKIFLEHTFKNDEDAVKIAIVYFIELAM 197

Query: 63  IGRERRQHMDWTMLGVIDDLEDFVSYDWGELI 93
           +G+ER+Q MD ++LG++D  E F +YDW  +I
Sbjct: 198 MGKERKQKMDTSLLGIVDRWEVFCNYDWSSMI 229

BLAST of CsaV3_3G022130 vs. NCBI nr
Match: XP_022154967.1 (uncharacterized protein LOC111022112 [Momordica charantia])

HSP 1 Score: 82.0 bits (201), Expect = 1.2e-12
Identity = 40/87 (45.98%), Postives = 60/87 (68.97%), Query Frame = 0

Query: 3   RHPIEFVDDKAL--RLRQLYLGDRSNMNGLELDKDYLTLTFESDEDVVKISLFYFVELAM 62
           RH +  VD      RLR LY  D +++   EL+K +L  TFE+DED VKI++ Y++ELAM
Sbjct: 101 RHTMNRVDXDVXNRRLRILYFQDXASVKCXELEKIFLEHTFENDEDAVKIAIVYYIELAM 160

Query: 63  IGRERRQHMDWTMLGVIDDLEDFVSYD 88
           +G+ER+Q MD ++LG++D  E + +YD
Sbjct: 161 MGKERKQKMDTSLLGIVDRWEVYCNYD 187

BLAST of CsaV3_3G022130 vs. NCBI nr
Match: XP_022153201.1 (uncharacterized protein LOC111020757 [Momordica charantia])

HSP 1 Score: 78.2 bits (191), Expect = 1.7e-11
Identity = 37/78 (47.44%), Postives = 51/78 (65.38%), Query Frame = 0

Query: 15  RLRQLYLGDRSNMNGLELDKDYLTLTFESDEDVVKISLFYFVELAMIGRERRQHMDWTML 74
           RLR  Y  D   +   EL+K +L   F  DEDVVK+ + YF+ELAM+G+ER+Q +D  +L
Sbjct: 115 RLRARYFKDGVRVKCSELEKIFLEDVFYDDEDVVKVRIVYFIELAMMGKERKQFIDTALL 174

Query: 75  GVIDDLEDFVSYDWGELI 93
           GV+D  E F +YDW  +I
Sbjct: 175 GVVDRWEVFCNYDWSSMI 192

BLAST of CsaV3_3G022130 vs. TrEMBL
Match: tr|A0A0A0L7D5|A0A0A0L7D5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G379230 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 6.8e-46
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0

Query: 1  MQRHPIEFVDDKALRLRQLYLGDRSNMNGLELDKDYLTLTFESDEDVVKISLFYFVELAM 60
          MQRHPIEFVDDKALRLRQLYLGDRSNMNGLELDKDYLTLTFESDEDVVKISLFYFVELAM
Sbjct: 1  MQRHPIEFVDDKALRLRQLYLGDRSNMNGLELDKDYLTLTFESDEDVVKISLFYFVELAM 60

Query: 61 IGRERRQHMDWTMLGVIDDLEDFVSYDWGELI 93
          IGRERRQHMDWTMLGVIDDLEDFVSYDWGELI
Sbjct: 61 IGRERRQHMDWTMLGVIDDLEDFVSYDWGELI 92

BLAST of CsaV3_3G022130 vs. TrEMBL
Match: tr|A0A0A0LYA9|A0A0A0LYA9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701360 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-06
Identity = 32/56 (57.14%), Postives = 38/56 (67.86%), Query Frame = 0

Query: 27 MNGLELDKDYLTLTFESDEDVVKISLFYFVELAMIGRERRQHMDWTMLGVIDDLED 83
          MNG ELDK+Y TL FESDED VKISLFYF+EL MI       M W  LG + + ++
Sbjct: 1  MNGFELDKEYPTLNFESDEDAVKISLFYFLELVMI-------MGWGTLGNLKETQN 49

BLAST of CsaV3_3G022130 vs. TrEMBL
Match: tr|Q5GIT0|Q5GIT0_CUCME (Ulp1 peptidase-like OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.1e-06
Identity = 29/87 (33.33%), Postives = 52/87 (59.77%), Query Frame = 0

Query: 4   HPIEFVDDKALRLRQLYLGDRSN--MNGLELDKDYLTLTFESDEDVVKISLFYFVELAMI 63
           +P+E  D  + RL+ L  G  +   +  LE+++ +    F +D+D VK++L  F+E  M+
Sbjct: 100 NPLE-KDCDSKRLQSLLFGSENKKVITCLEIEEIFKNFEFTNDDDAVKVALAVFIETVMV 159

Query: 64  GRERRQHMDWTMLGVIDDLEDFVSYDW 89
           G++++   D  +LG +DD E F S+DW
Sbjct: 160 GKDKKTQFDMDILGRVDDEEAFKSFDW 185

BLAST of CsaV3_3G022130 vs. TrEMBL
Match: tr|Q5GIS9|Q5GIS9_CUCME (Ulp1 peptidase-like OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.0e-05
Identity = 23/61 (37.70%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 33  DKDYLTLTFE-SDEDVVKISLFYFVELAMIGRERRQHMDWTMLGVIDDLEDFVSYDWGEL 92
           D + + L +E  D+D+VK++L YF+E++++G++RR  +D   L + DD   F +YDWG +
Sbjct: 139 DLEDIFLEYEGDDDDIVKLALVYFIEISLLGKDRRTKVDIGFLKIADDWNSFNNYDWGRI 198

BLAST of CsaV3_3G022130 vs. TrEMBL
Match: tr|A0A0A0LN40|A0A0A0LN40_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G428980 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.6e-05
Identity = 24/33 (72.73%), Postives = 30/33 (90.91%), Query Frame = 0

Query: 6  IEFVDDKALRLRQLYLGDRSNMNGLELDKDYLT 39
          ++F +DKALRLRQLY+GDRSNMNG +LDK+Y T
Sbjct: 3  VQFEEDKALRLRQLYMGDRSNMNGSKLDKEYPT 35

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN57895.11.0e-45100.00hypothetical protein Csa_3G379230 [Cucumis sativus][more]
XP_022157020.13.2e-1546.74uncharacterized protein LOC111023847 [Momordica charantia][more]
XP_022154995.17.2e-1546.74uncharacterized protein LOC111022139 [Momordica charantia][more]
XP_022154967.11.2e-1245.98uncharacterized protein LOC111022112 [Momordica charantia][more]
XP_022153201.11.7e-1147.44uncharacterized protein LOC111020757 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L7D5|A0A0A0L7D5_CUCSA6.8e-46100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G379230 PE=4 SV=1[more]
tr|A0A0A0LYA9|A0A0A0LYA9_CUCSA1.1e-0657.14Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701360 PE=4 SV=1[more]
tr|Q5GIT0|Q5GIT0_CUCME3.1e-0633.33Ulp1 peptidase-like OS=Cucumis melo OX=3656 PE=4 SV=1[more]
tr|Q5GIS9|Q5GIS9_CUCME2.0e-0537.70Ulp1 peptidase-like OS=Cucumis melo OX=3656 PE=4 SV=1[more]
tr|A0A0A0LN40|A0A0A0LN40_CUCSA7.6e-0572.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G428980 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015410DUF1985
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G022130.1CsaV3_3G022130.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015410Domain of unknown function DUF1985PFAMPF09331DUF1985coord: 8..90
e-value: 1.1E-7
score: 31.9

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G022130Cucumber (Chinese Long) v3cuccucB073
CsaV3_3G022130Cucumber (Chinese Long) v3cuccucB110
CsaV3_3G022130Silver-seed gourdcarcucB0789
CsaV3_3G022130Silver-seed gourdcarcucB0816
CsaV3_3G022130Cucumber (Gy14) v2cgybcucB122
CsaV3_3G022130Cucumber (Gy14) v2cgybcucB117
CsaV3_3G022130Cucumber (Gy14) v1cgycucB389
CsaV3_3G022130Cucurbita maxima (Rimu)cmacucB0621
CsaV3_3G022130Cucurbita maxima (Rimu)cmacucB0710
CsaV3_3G022130Cucurbita maxima (Rimu)cmacucB1054
CsaV3_3G022130Cucurbita moschata (Rifu)cmocucB0604
CsaV3_3G022130Cucurbita moschata (Rifu)cmocucB0696
CsaV3_3G022130Cucurbita pepo (Zucchini)cpecucB0304
CsaV3_3G022130Cucurbita pepo (Zucchini)cpecucB0902
CsaV3_3G022130Wild cucumber (PI 183967)cpicucB144
CsaV3_3G022130Wild cucumber (PI 183967)cpicucB152
CsaV3_3G022130Bottle gourd (USVL1VR-Ls)cuclsiB168
CsaV3_3G022130Bottle gourd (USVL1VR-Ls)cuclsiB236
CsaV3_3G022130Bottle gourd (USVL1VR-Ls)cuclsiB243
CsaV3_3G022130Melon (DHL92) v3.5.1cucmeB209
CsaV3_3G022130Melon (DHL92) v3.5.1cucmeB245
CsaV3_3G022130Melon (DHL92) v3.6.1cucmedB203
CsaV3_3G022130Melon (DHL92) v3.6.1cucmedB245
CsaV3_3G022130Watermelon (Charleston Gray)cucwcgB265
CsaV3_3G022130Watermelon (97103) v1cucwmB228
CsaV3_3G022130Watermelon (97103) v1cucwmB251
CsaV3_3G022130Watermelon (97103) v1cucwmB292
CsaV3_3G022130Watermelon (97103) v2cucwmbB215
CsaV3_3G022130Watermelon (97103) v2cucwmbB236
CsaV3_3G022130Watermelon (97103) v2cucwmbB245
CsaV3_3G022130Wax gourdcucwgoB286
CsaV3_3G022130Wax gourdcucwgoB309