CsaV3_3G021730 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.GTTGGAACTCCGTGTATGCTTGCGTTTGAAACTAAAGATACTATCATTGCACATGGGACAATATTTGATGCTGAAGGTGACGGTGAGAACATCAAGGTATTAGTGGATGTTGTCCTCGATGGCCAATGTGTGATTCTGAAACCGAAAAAGGAAGGAGTCACCAAACTGACGCATGAAGTCGGATCACATTTAATGTGGCCACGACATCTTGTTCTTACTAGGAATGATAAGGTAATTGTCTGTCTTATTGTATTGGAGTTTTTATGCATCAAATTATACTAACAGTAGTTGAACTTTTTGTGATAGAAGGAAACTGTGGGCTTCAATACGGATCTGTCCACATTCTCTAGTGCAACATTTCTACGTGCTCCAGTGGTGCTCTGGTGTTTGGTTAGACTCGCTGAACATATGGGGTCATCGATTCAACTAAACACGCCTTCAGAGGTATTCAGTGTGAAGAGAAAATGTTGCATTATGGTTGAGTCACTGAGGGATTTCTCGTCAATGCAACCAATATGCACATCATGTCTAGATGCTTACATGATGTAAGATTTCCTTTTAATATATATACGTCATTGATGTTTGCGGTCTCCTTTTAATTGTAATGTCCATTTCATTGTGTAGGTACCTTCACACAATTATGGTACAAGGACGAAGTTCAAGCTTGTTCAAGTTCATGGATGCCGGATCTGTAAGTTACTCGAGTTACAAACAATCGCGTGCGCAGTTGTTGAATGCTCGACTTCTCGGAGCCGAGTATGACCAAGTAGTATTGTTCCCATACAACTCTGGGTAAGCGCATGATAATGACATTTTCATTAACATTCACAATTTGAATTCACTATTAAAATATTAATTTATTATAATGGTGGAAATGTGTTCTTAGCAATCACTGGACATTGGTCGTTGTTAATCCTACAAAGGGTGCTGCATATTGGATTGACCCGTTGAAGAATCAGATTGACGGAGACATGAGTGAAGTGCTTCAAATGTAGGACATATGATTGTCGTTAATGTCTTTATTATGTGTGCAACTATTTTAATTATGTAACAATCTTATATTATGTGGTAGGTCATTCAATATATCAAAGAAGAAAAAACCAAATTGGAAGGTTGTTAAG GTTGGAACTCCGTGTATGCTTGCGTTTGAAACTAAAGATACTATCATTGCACATGGGACAATATTTGATGCTGAAGGTGACGGTGAGAACATCAAGGTATTAGTGGATGTTGTCCTCGATGGCCAATGTGTGATTCTGAAACCGAAAAAGGAAGGAGTCACCAAACTGACGCATGAAGTCGGATCACATTTAATGTGGCCACGACATCTTGTTCTTACTAGGAATGATAAGGAAACTGTGGGCTTCAATACGGATCTGTCCACATTCTCTAGTGCAACATTTCTACGTGCTCCAGTGGTGCTCTGGTGTTTGGTTAGACTCGCTGAACATATGGGGTCATCGATTCAACTAAACACGCCTTCAGAGGTATTCAGTGTGAAGAGAAAATGTTGCATTATGGTTGAGTCACTGAGGGATTTCTCGTCAATGCAACCAATATGCACATCATGTCTAGATGCTTACATGATGTACCTTCACACAATTATGGTACAAGGACGAAGTTCAAGCTTGTTCAAGTTCATGGATGCCGGATCTGTAAGTTACTCGAGTTACAAACAATCGCGTGCGCAGTTGTTGAATGCTCGACTTCTCGGAGCCGAGTATGACCAAGTAGTATTGTTCCCATACAACTCTGGCAATCACTGGACATTGGTCGTTGTTAATCCTACAAAGGGTGCTGCATATTGGATTGACCCGTTGAAGAATCAGATTGACGGAGACATGAGTGAAGTGCTTCAAATGTCATTCAATATATCAAAGAAGAAAAAACCAAATTGGAAGGTTGTTAAG GTTGGAACTCCGTGTATGCTTGCGTTTGAAACTAAAGATACTATCATTGCACATGGGACAATATTTGATGCTGAAGGTGACGGTGAGAACATCAAGGTATTAGTGGATGTTGTCCTCGATGGCCAATGTGTGATTCTGAAACCGAAAAAGGAAGGAGTCACCAAACTGACGCATGAAGTCGGATCACATTTAATGTGGCCACGACATCTTGTTCTTACTAGGAATGATAAGGAAACTGTGGGCTTCAATACGGATCTGTCCACATTCTCTAGTGCAACATTTCTACGTGCTCCAGTGGTGCTCTGGTGTTTGGTTAGACTCGCTGAACATATGGGGTCATCGATTCAACTAAACACGCCTTCAGAGGTATTCAGTGTGAAGAGAAAATGTTGCATTATGGTTGAGTCACTGAGGGATTTCTCGTCAATGCAACCAATATGCACATCATGTCTAGATGCTTACATGATGTACCTTCACACAATTATGGTACAAGGACGAAGTTCAAGCTTGTTCAAGTTCATGGATGCCGGATCTGTAAGTTACTCGAGTTACAAACAATCGCGTGCGCAGTTGTTGAATGCTCGACTTCTCGGAGCCGAGTATGACCAAGTAGTATTGTTCCCATACAACTCTGGCAATCACTGGACATTGGTCGTTGTTAATCCTACAAAGGGTGCTGCATATTGGATTGACCCGTTGAAGAATCAGATTGACGGAGACATGAGTGAAGTGCTTCAAATGTCATTCAATATATCAAAGAAGAAAAAACCAAATTGGAAGGTTGTTAAG VGTPCMLAFETKDTIIAHGTIFDAEGDGENIKVLVDVVLDGQCVILKPKKEGVTKLTHEVGSHLMWPRHLVLTRNDKETVGFNTDLSTFSSATFLRAPVVLWCLVRLAEHMGSSIQLNTPSEVFSVKRKCCIMVESLRDFSSMQPICTSCLDAYMMYLHTIMVQGRSSSLFKFMDAGSVSYSSYKQSRAQLLNARLLGAEYDQVVLFPYNSGNHWTLVVVNPTKGAAYWIDPLKNQIDGDMSEVLQMSFNISKKKKPNWKVVK
BLAST of CsaV3_3G021730 vs. NCBI nr
Match: XP_011657179.1 (PREDICTED: uncharacterized protein LOC105435814 isoform X2 [Cucumis sativus]) HSP 1 Score: 269.2 bits (687), Expect = 1.4e-68 Identity = 133/151 (88.08%), Postives = 138/151 (91.39%), Query Frame = 0
BLAST of CsaV3_3G021730 vs. NCBI nr
Match: XP_011657178.1 (PREDICTED: uncharacterized protein LOC105435814 isoform X1 [Cucumis sativus]) HSP 1 Score: 264.6 bits (675), Expect = 3.5e-67 Identity = 133/152 (87.50%), Postives = 138/152 (90.79%), Query Frame = 0
BLAST of CsaV3_3G021730 vs. NCBI nr
Match: KGN47214.1 (hypothetical protein Csa_6G211860 [Cucumis sativus]) HSP 1 Score: 223.8 bits (569), Expect = 6.9e-55 Identity = 107/116 (92.24%), Postives = 113/116 (97.41%), Query Frame = 0
BLAST of CsaV3_3G021730 vs. NCBI nr
Match: XP_016903428.1 (PREDICTED: uncharacterized protein LOC107992185, partial [Cucumis melo]) HSP 1 Score: 171.4 bits (433), Expect = 4.1e-39 Identity = 73/152 (48.03%), Postives = 114/152 (75.00%), Query Frame = 0
BLAST of CsaV3_3G021730 vs. NCBI nr
Match: XP_016900352.1 (PREDICTED: uncharacterized protein LOC103490696 [Cucumis melo]) HSP 1 Score: 169.1 bits (427), Expect = 2.0e-38 Identity = 78/140 (55.71%), Postives = 105/140 (75.00%), Query Frame = 0
BLAST of CsaV3_3G021730 vs. TrEMBL
Match: tr|A0A0A0KEE8|A0A0A0KEE8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G211860 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 4.6e-55 Identity = 107/116 (92.24%), Postives = 113/116 (97.41%), Query Frame = 0
BLAST of CsaV3_3G021730 vs. TrEMBL
Match: tr|A0A1S4E5B7|A0A1S4E5B7_CUCME (uncharacterized protein LOC107992185 OS=Cucumis melo OX=3656 GN=LOC107992185 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.7e-39 Identity = 73/152 (48.03%), Postives = 114/152 (75.00%), Query Frame = 0
BLAST of CsaV3_3G021730 vs. TrEMBL
Match: tr|A0A1S4DWI8|A0A1S4DWI8_CUCME (uncharacterized protein LOC103490696 OS=Cucumis melo OX=3656 GN=LOC103490696 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.3e-38 Identity = 78/140 (55.71%), Postives = 105/140 (75.00%), Query Frame = 0
BLAST of CsaV3_3G021730 vs. TrEMBL
Match: tr|A0A1S3BWF9|A0A1S3BWF9_CUCME (uncharacterized protein LOC103493876 OS=Cucumis melo OX=3656 GN=LOC103493876 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 6.9e-35 Identity = 69/140 (49.29%), Postives = 105/140 (75.00%), Query Frame = 0
BLAST of CsaV3_3G021730 vs. TrEMBL
Match: tr|A0A2P6PI11|A0A2P6PI11_ROSCH (Putative Ulp1 protease family catalytic domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0240601 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 1.4e-32 Identity = 92/282 (32.62%), Postives = 145/282 (51.42%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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