CsaV3_3G020740 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G020740
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 16957678 .. 16957914 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAACCCTCTCGCCAAGCCTAAACGCCTAGCAAACGTCTTAAGGTTTGGCCACCAAGCCTTAACTCCAATGCATGGTCTTCTTGGTGTTTGTCTTGCCGCCCAACATCCTTCCTTGTGTGGCCATGTTTCTCGTCCAACTAACCTCTCAAAGCCTTCCTCATGTGGTCCTTGTCCGCCCAAAGACAAACCTCAGATGTCTAAGCATTACTTCAATGAGGTTACCCTTACTTGA

mRNA sequence

ATGGACAACCCTCTCGCCAAGCCTAAACGCCTAGCAAACGTCTTAAGGTTTGGCCACCAAGCCTTAACTCCAATGCATGGTCTTCTTGGTGTTTGTCTTGCCGCCCAACATCCTTCCTTGTGTGGCCATGTTTCTCGTCCAACTAACCTCTCAAAGCCTTCCTCATGTGGTCCTTGTCCGCCCAAAGACAAACCTCAGATGTCTAAGCATTACTTCAATGAGGTTACCCTTACTTGA

Coding sequence (CDS)

ATGGACAACCCTCTCGCCAAGCCTAAACGCCTAGCAAACGTCTTAAGGTTTGGCCACCAAGCCTTAACTCCAATGCATGGTCTTCTTGGTGTTTGTCTTGCCGCCCAACATCCTTCCTTGTGTGGCCATGTTTCTCGTCCAACTAACCTCTCAAAGCCTTCCTCATGTGGTCCTTGTCCGCCCAAAGACAAACCTCAGATGTCTAAGCATTACTTCAATGAGGTTACCCTTACTTGA

Protein sequence

MDNPLAKPKRLANVLRFGHQALTPMHGLLGVCLAAQHPSLCGHVSRPTNLSKPSSCGPCPPKDKPQMSKHYFNEVTLT
BLAST of CsaV3_3G020740 vs. NCBI nr
Match: KGN57760.1 (hypothetical protein Csa_3G282480 [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-39
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0

Query: 1  MDNPLAKPKRLANVLRFGHQALTPMHGLLGVCLAAQHPSLCGHVSRPTNLSKPSSCGPCP 60
          MDNPLAKPKRLANVLRFGHQALTPMHGLLGVCLAAQHPSLCGHVSRPTNLSKPSSCGPCP
Sbjct: 1  MDNPLAKPKRLANVLRFGHQALTPMHGLLGVCLAAQHPSLCGHVSRPTNLSKPSSCGPCP 60

Query: 61 PKDKPQMSKHYFNEVTLT 79
          PKDKPQMSKHYFNEVTLT
Sbjct: 61 PKDKPQMSKHYFNEVTLT 78

BLAST of CsaV3_3G020740 vs. TrEMBL
Match: tr|A0A0A0L6Z4|A0A0A0L6Z4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G282480 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.1e-40
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0

Query: 1  MDNPLAKPKRLANVLRFGHQALTPMHGLLGVCLAAQHPSLCGHVSRPTNLSKPSSCGPCP 60
          MDNPLAKPKRLANVLRFGHQALTPMHGLLGVCLAAQHPSLCGHVSRPTNLSKPSSCGPCP
Sbjct: 1  MDNPLAKPKRLANVLRFGHQALTPMHGLLGVCLAAQHPSLCGHVSRPTNLSKPSSCGPCP 60

Query: 61 PKDKPQMSKHYFNEVTLT 79
          PKDKPQMSKHYFNEVTLT
Sbjct: 61 PKDKPQMSKHYFNEVTLT 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN57760.11.2e-39100.00hypothetical protein Csa_3G282480 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L6Z4|A0A0A0L6Z4_CUCSA8.1e-40100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G282480 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G020740.1CsaV3_3G020740.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None