CsaV3_3G020660 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G020660
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 16843587 .. 16843768 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGGGATGATAAGATCGATGATGGCGAAGATGATCGAAGAGGAGTCAGAAACGTAGGTGGACTTGTCAGACGTTGATTGTGAGGAAGAAAATGGAGGTGAAAGTGAGACCGAGACGGAGGATATGGACGTCGATTGCGAGGACTGAGGTGAGGGAGACGACTAAGGCAGACGACTGA

mRNA sequence

ATGGATGGGGATGATAAGATCGATGATGGCGAAGATGATCGAAGAGGAACGTTGATTGTGAGGAAGAAAATGGAGGTGAAAGTGAGACCGAGACGGAGGATATGGACGTCGATTGCGAGGACTGAGGTGAGGGAGACGACTAAGGCAGACGACTGA

Coding sequence (CDS)

ATGGATGGGGATGATAAGATCGATGATGGCGAAGATGATCGAAGAGGAACGTTGATTGTGAGGAAGAAAATGGAGGTGAAAGTGAGACCGAGACGGAGGATATGGACGTCGATTGCGAGGACTGAGGTGAGGGAGACGACTAAGGCAGACGACTGA

Protein sequence

MDGDDKIDDGEDDRRGTLIVRKKMEVKVRPRRRIWTSIARTEVRETTKADD
BLAST of CsaV3_3G020660 vs. NCBI nr
Match: KGN57752.1 (hypothetical protein Csa_3G279920 [Cucumis sativus])

HSP 1 Score: 100.9 bits (250), Expect = 1.3e-18
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0

Query: 1  MDGDDKIDDGEDDRRGTLIVRKKMEVKVRPRRRIWTSIARTEVRETTKADD 52
          MDGDDKIDDGEDDRRGTLIVRKKMEVKVRPRRRIWTSIARTEVRETTKADD
Sbjct: 1  MDGDDKIDDGEDDRRGTLIVRKKMEVKVRPRRRIWTSIARTEVRETTKADD 51

BLAST of CsaV3_3G020660 vs. TrEMBL
Match: tr|A0A0A0LAQ1|A0A0A0LAQ1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G279920 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 8.9e-19
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0

Query: 1  MDGDDKIDDGEDDRRGTLIVRKKMEVKVRPRRRIWTSIARTEVRETTKADD 52
          MDGDDKIDDGEDDRRGTLIVRKKMEVKVRPRRRIWTSIARTEVRETTKADD
Sbjct: 1  MDGDDKIDDGEDDRRGTLIVRKKMEVKVRPRRRIWTSIARTEVRETTKADD 51

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN57752.11.3e-18100.00hypothetical protein Csa_3G279920 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LAQ1|A0A0A0LAQ1_CUCSA8.9e-19100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G279920 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G020660.1CsaV3_3G020660.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None