CsaV3_3G020630 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G020630
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 16713909 .. 16714863 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTAGAATTGCCGGCATTTCCTCAAAAAGTTGCTTCAAAGTATGGCTGTATTGAATTAAATCATCGTTCCTCTATCTCAGCTCCAACAATACAGATCACATTTCCAAAGCAGGGTAAGTCATCCTTTTGGGTTCATAAGAACAGTAAGGTAATCAAAGAAGGTTTTAGAGGTCTGTGGGTCGTTACTAGTCTGTTTGAGTTTAATGATTGGAAAGATATTAAAATACTGCTGGAGGATCATTTTCCATTCCAAAATAACCATTAATCCTTTTTCTGCGGATAAAGCTATAATTAAATCCCCCTTATGCAATCTTGAAGACAAGGTTGAGTTCCTGGGCAAGTGGCAGAGATATGGTCTCTTCTATATATTATTTGAAATGTGGAATGGCAAAAAATATAGTAGACCATATTTTGTGAAAGGTTATGGCGGTTGGATCTCTATTAAAAACTTACCGTTGGATTATTGGAGTGTTGACATTTATAAGAAAGCCATTGGAGGATACTTTGGAGGTCTTGAAAGCATCTCTTTAGAAACCATGAATCTGATTAACTGTAGGAGGCCAAAATAAAGGCCAGTTGAAATCTTTGTGATTTTCCGCCAGCTACAGTTGAATCACAAGATGCATATAGAGGCAATATTTTCTTAAATTTCGGGGACATAAAAGCATTGGAAGCTCCAAAGGCCGTCGAAGAAGCTTTGTTCATTAGCGACTTCAACAATCTGATTGATCTACTCAGGATGTCAAGTTCTTTTAGACGGAGGAGAATCTCCAAATATGCTGAAACTGGAATGGGCCTTTCTTTCCTCAAAATACTCGAAACCAGGATTTTCGAGGAACCCTTTTGAAGTCTTGATGGAAAAGGAGGCGAGCTGGGCATTGGATCCATCTCATGTTTGCCAGACCCCATCATCAAGTTTCAAAGTTGCCGGAGAAACACAAATTGACCAGTAG

mRNA sequence

ATGTTAGAATTGCCGGCATTTCCTCAAAAAGTTGCTTCAAAGTATGGCTGTATTGAATTAAATCATCGTTCCTCTATCTCAGCTCCAACAATACAGATCACATTTCCAAAGCAGGGTAAGTCATCCTTTTGGGTTCATAAGAACAGTAAGGTAATCAAAGAAGGTTTTAGAGGATGTCAAGTTCTTTTAGACGGAGGAGAATCTCCAAATATGCTGAAACTGGAATGGGCCTTTCTTTCCTCAAAATACTCGAAACCAGGATTTTCGAGGAACCCTTTTGAAGTCTTGATGGAAAAGGAGGCGAGCTGGGCATTGGATCCATCTCATGTTTGCCAGACCCCATCATCAAGTTTCAAAGTTGCCGGAGAAACACAAATTGACCAGTAG

Coding sequence (CDS)

ATGTTAGAATTGCCGGCATTTCCTCAAAAAGTTGCTTCAAAGTATGGCTGTATTGAATTAAATCATCGTTCCTCTATCTCAGCTCCAACAATACAGATCACATTTCCAAAGCAGGGTAAGTCATCCTTTTGGGTTCATAAGAACAGTAAGGTAATCAAAGAAGGTTTTAGAGGATGTCAAGTTCTTTTAGACGGAGGAGAATCTCCAAATATGCTGAAACTGGAATGGGCCTTTCTTTCCTCAAAATACTCGAAACCAGGATTTTCGAGGAACCCTTTTGAAGTCTTGATGGAAAAGGAGGCGAGCTGGGCATTGGATCCATCTCATGTTTGCCAGACCCCATCATCAAGTTTCAAAGTTGCCGGAGAAACACAAATTGACCAGTAG

Protein sequence

MLELPAFPQKVASKYGCIELNHRSSISAPTIQITFPKQGKSSFWVHKNSKVIKEGFRGCQVLLDGGESPNMLKLEWAFLSSKYSKPGFSRNPFEVLMEKEASWALDPSHVCQTPSSSFKVAGETQIDQ
BLAST of CsaV3_3G020630 vs. NCBI nr
Match: KGN66796.1 (hypothetical protein Csa_1G690330 [Cucumis sativus])

HSP 1 Score: 53.5 bits (127), Expect = 6.1e-04
Identity = 25/33 (75.76%), Postives = 26/33 (78.79%), Query Frame = 0

Query: 80  SSKYSKPGFSRNPFEVLMEKEASWALDPSHVCQ 113
           SS YSKPGFSRNPFEVLMEKE    L  SHVC+
Sbjct: 70  SSTYSKPGFSRNPFEVLMEKEVCRELASSHVCR 102

BLAST of CsaV3_3G020630 vs. TrEMBL
Match: tr|A0A0A0M3I8|A0A0A0M3I8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690330 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.0e-04
Identity = 25/33 (75.76%), Postives = 26/33 (78.79%), Query Frame = 0

Query: 80  SSKYSKPGFSRNPFEVLMEKEASWALDPSHVCQ 113
           SS YSKPGFSRNPFEVLMEKE    L  SHVC+
Sbjct: 70  SSTYSKPGFSRNPFEVLMEKEVCRELASSHVCR 102

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN66796.16.1e-0475.76hypothetical protein Csa_1G690330 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0M3I8|A0A0A0M3I8_CUCSA4.0e-0475.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G690330 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G020630.1CsaV3_3G020630.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None