CsaV3_3G020620 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G020620
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPhosphatidylserine decarboxylase proenzyme 2
Locationchr3 : 16712259 .. 16713530 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAAAGTGGTGAAGGAACTCTTACATAGCATTTCTGAAAAGCAAAGAAAGCAAATGGATTCAGTGAAATCTGCAAAAGATATTCCACGTTTCATTGTATCTTTCAAGGATCAAATCAATATGATTGAGGTGAAGCACCCTTCGAACTATTTCAAGACATTTAATGATTTCTTTACAAGAGAGTTGAAGCCTGGTGTTAGACCAATTGCACATGTGGAGTGTGGTGATGTTGCAATATGTGCTGCTGTTTGCTGACTAATGGCATTTAAGTCATTTGATGACAGCCTAAAGGGTGGAATTTTTCAGTTCAAGGTTCTTTAGGGCAAAATATAAGTGCGAGTGCTTTTAAGGATGGGTCGTTGGTGTTATTTCAATTGGCACCACAAGATTTTCATCGCTTTCATTTTCCGGTCTTTGGTTTCATTGAACTAATTGTTGACATACCTGGATGCCTGTGTACTGATAATCCAATTGCTGTCAATAGGAAGTATTGCAATGTCTTCACAGAGAACAAGTATTCAGTAGCTATAATTTCAACGTCCGATTTTGGTAAGGTTGCTTTTGTTGCAATTGGAAATACCTTGGCTGGCAGTTTAACCTTAAAAAAAGGGCAGGGAGTTAATGTAGAGAAAGGAGAAGAGTTTTGGGTATTTATCTTTTGGTGGAAGTTCCGTAATTTGTGTCTTTGAAAAGAACGCAACGCAACAACTTGGTGCTCTCTAAACAATCAGTTTGTGAATTACTCCACTCATGTTCTTTGCCTCAACTGGGCAGTCTTTATCTCTCAACCACCTGATAGAACCCGACTTCTCAGTTGGCAATGGAAAAGGATACAATATAGGAAATACTGTGGCTAATGAAAAATACAGAAGAAAAATAAAAGCTCCCTGTCGAAGACTCCCTCTCTCCCTCGGCTGCCTTCCTATCTCTCAAGGAATAACAGTAGGATTCTTATCACCAAAATTCTCTGCCCTCTCCCTTCCTTCTCGTCTCTATTTATATTTGCTCCCTCACTCCCCTGCCATGGTGATCGTGCGTCGGCACTCCATTTCCTTGTGGTCCCCACTTGCAGTTGGTTACATAACCAACTCCTCGTCCTTTTTCTCTTTCCTGTTTTTTCTCCTACTATACTGGCGTATGATGGGTGGTCTAACACCACCCCTAGGCCCTGTTCTGTTTTGGGGACTTTGTTTGGCATTTTGACAGGTTCGTTTTCCCCTCTCTGGCCAGCCTTCTTTGGAGCATAGCTTATATTTTCTTTTGGTTTAG

mRNA sequence

ATGGATAAAGTGGTGAAGGAACTCTTACATAGCATTTCTGAAAAGCAAAGAAAGCAAATGGATTCAGTGAAATCTGCAAAAGATATTCCACGTTTCATTGTATCTTTCAAGGATCAAATCAATATGATTGAGGTGAAGCACCCTTCGAACTATTTCAAGACATTTAATGATTTCTTTACAAGAGAGTTGAAGCCTGGTGTTAGACCAATTGCACATGTGGAGTGTGTTCAAGGTTCTTTAGGGCAAAATATAAGTGCGAGTGCTTTTAAGGATGGGTCGTTGGTGTTATTTCAATTGGCACCACAAGATTTTCATCGCTTTCATTTTCCGGTCTTTGGTTTCATTGAACTAATTGTTGACATACCTGGATGCCTGTGTACTGATAATCCAATTGCTGTCAATAGGAAGTATTGCAATGTCTTCACAGAGAACAAGTATTCAGTAGCTATAATTTCAACGTCCGATTTTGGTAAGGTTGCTTTTGTTGCAATTGGAAATACCTTGGCTGGCAGTTTAACCTTAAAAAAAGGGCAGGGAGTTAATGTAGAGAAAGGAGAAGAGTTTTGGGTTCGTTTTCCCCTCTCTGGCCAGCCTTCTTTGGAGCATAGCTTATATTTTCTTTTGGTTTAG

Coding sequence (CDS)

ATGGATAAAGTGGTGAAGGAACTCTTACATAGCATTTCTGAAAAGCAAAGAAAGCAAATGGATTCAGTGAAATCTGCAAAAGATATTCCACGTTTCATTGTATCTTTCAAGGATCAAATCAATATGATTGAGGTGAAGCACCCTTCGAACTATTTCAAGACATTTAATGATTTCTTTACAAGAGAGTTGAAGCCTGGTGTTAGACCAATTGCACATGTGGAGTGTGTTCAAGGTTCTTTAGGGCAAAATATAAGTGCGAGTGCTTTTAAGGATGGGTCGTTGGTGTTATTTCAATTGGCACCACAAGATTTTCATCGCTTTCATTTTCCGGTCTTTGGTTTCATTGAACTAATTGTTGACATACCTGGATGCCTGTGTACTGATAATCCAATTGCTGTCAATAGGAAGTATTGCAATGTCTTCACAGAGAACAAGTATTCAGTAGCTATAATTTCAACGTCCGATTTTGGTAAGGTTGCTTTTGTTGCAATTGGAAATACCTTGGCTGGCAGTTTAACCTTAAAAAAAGGGCAGGGAGTTAATGTAGAGAAAGGAGAAGAGTTTTGGGTTCGTTTTCCCCTCTCTGGCCAGCCTTCTTTGGAGCATAGCTTATATTTTCTTTTGGTTTAG

Protein sequence

MDKVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFTRELKPGVRPIAHVECVQGSLGQNISASAFKDGSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSVAIISTSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEEFWVRFPLSGQPSLEHSLYFLLV
Homology
[Close]
BLAST of CsaV3_3G020620 vs. NCBI nr
Match: XP_008455245.1 (PREDICTED: phosphatidylserine decarboxylase proenzyme 2-like [Cucumis melo])

HSP 1 Score: 293.5 bits (750), Expect = 5.7e-76
Identity = 155/220 (70.45%), Postives = 168/220 (76.36%), Query Frame = 0 

Query: 1   MDKVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFT 60
           MDK VKELL+SISEKQ K+MDSV+SAKDIP FI SFKDQINM EVKHP  YFKTFN+FF 
Sbjct: 375 MDKGVKELLYSISEKQGKRMDSVESAKDIPSFIESFKDQINMNEVKHPLEYFKTFNEFFI 434

Query: 61  RELKPGVRPIAHVEC--------------------------------VQGSLGQNISASA 120
           RELKPGVRPIAHVEC                                VQG LGQ+ISASA
Sbjct: 435 RELKPGVRPIAHVECDDVAVCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGQDISASA 494

Query: 121 FKDGSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSV 180
           F DG+LV+F+LAPQD+HRFHFPV GFIE IVDIPGCL T NPIAVN KYCNVFTENK SV
Sbjct: 495 FMDGTLVIFRLAPQDYHRFHFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSV 554

Query: 181 AIISTSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEEF 189
           AIISTSDFGKVAFVAIG T+ GS+T KKG+G NV+KGEEF
Sbjct: 555 AIISTSDFGKVAFVAIGATMVGSITFKKGKGDNVKKGEEF 594

[Close]
BLAST of CsaV3_3G020620 vs. NCBI nr
Match: XP_011658767.1 (PREDICTED: phosphatidylserine decarboxylase proenzyme 2 [Cucumis sativus])

HSP 1 Score: 290.0 bits (741), Expect = 6.3e-75
Identity = 154/220 (70.00%), Postives = 166/220 (75.45%), Query Frame = 0 

Query: 1   MDKVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFT 60
           MDK VKELLHSISEKQ K+MDSV+SAKDI  FI SFKDQINM EVKHP  YFKTFN+FF 
Sbjct: 374 MDKGVKELLHSISEKQGKRMDSVESAKDISHFIESFKDQINMNEVKHPLEYFKTFNEFFI 433

Query: 61  RELKPGVRPIAHVEC--------------------------------VQGSLGQNISASA 120
           RELKPGVRPIAHVEC                                VQG LGQ+ISASA
Sbjct: 434 RELKPGVRPIAHVECDDVAVCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGQDISASA 493

Query: 121 FKDGSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSV 180
           F DG+LV+F+LAPQD+HRFHFPV GFIE IVDIPGCL T NPIAVN KYCNVFTENK SV
Sbjct: 494 FMDGTLVIFRLAPQDYHRFHFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSV 553

Query: 181 AIISTSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEEF 189
           AIISTSDFGKVAFVAIG T+ GS+T KKG+G  V+KGEEF
Sbjct: 554 AIISTSDFGKVAFVAIGATMVGSITFKKGKGDYVKKGEEF 593

[Close]
BLAST of CsaV3_3G020620 vs. NCBI nr
Match: XP_022963616.1 (phosphatidylserine decarboxylase proenzyme 2-like [Cucurbita moschata])

HSP 1 Score: 284.6 bits (727), Expect = 2.6e-73
Identity = 151/220 (68.64%), Postives = 163/220 (74.09%), Query Frame = 0 

Query: 1   MDKVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFT 60
           MDK VKELLHSISEKQ K+MDSV+SAKDIP FI SFKDQINM EVKHP  YFKTFN+FF 
Sbjct: 369 MDKGVKELLHSISEKQGKRMDSVESAKDIPHFIESFKDQINMNEVKHPLEYFKTFNEFFI 428

Query: 61  RELKPGVRPIAHVEC--------------------------------VQGSLGQNISASA 120
           RELKP VRPIAHVEC                                VQG LGQ ISA A
Sbjct: 429 RELKPDVRPIAHVECDDVAVCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGQEISAGA 488

Query: 121 FKDGSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSV 180
           F DG+LV+F+LAPQD+HRFHFPV GFIE IVDIPGCL T NPIAVN KYCNVFTENK SV
Sbjct: 489 FMDGTLVIFRLAPQDYHRFHFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSV 548

Query: 181 AIISTSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEEF 189
           AIIS+SDFGKVAFVAIG T+ GS+T  KG+G  V+KGEEF
Sbjct: 549 AIISSSDFGKVAFVAIGATMVGSITFTKGKGDYVKKGEEF 588

[Close]
BLAST of CsaV3_3G020620 vs. NCBI nr
Match: XP_023553974.1 (phosphatidylserine decarboxylase proenzyme 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.6 bits (727), Expect = 2.6e-73
Identity = 151/220 (68.64%), Postives = 163/220 (74.09%), Query Frame = 0 

Query: 1   MDKVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFT 60
           MDK VKELLHSISEKQ K+MDSV+SAKDIP FI SFKDQINM EVKHP  YFKTFN+FF 
Sbjct: 369 MDKGVKELLHSISEKQGKRMDSVESAKDIPHFIESFKDQINMNEVKHPLEYFKTFNEFFI 428

Query: 61  RELKPGVRPIAHVEC--------------------------------VQGSLGQNISASA 120
           RELKP VRPIAHVEC                                VQG LGQ ISA A
Sbjct: 429 RELKPDVRPIAHVECDDVAVCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGQEISAGA 488

Query: 121 FKDGSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSV 180
           F DG+LV+F+LAPQD+HRFHFPV GFIE IVDIPGCL T NPIAVN KYCNVFTENK SV
Sbjct: 489 FMDGTLVIFRLAPQDYHRFHFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSV 548

Query: 181 AIISTSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEEF 189
           AIIS+SDFGKVAFVAIG T+ GS+T  KG+G  V+KGEEF
Sbjct: 549 AIISSSDFGKVAFVAIGATMVGSITFTKGKGDYVKKGEEF 588

[Close]
BLAST of CsaV3_3G020620 vs. NCBI nr
Match: XP_022967583.1 (phosphatidylserine decarboxylase proenzyme 2-like [Cucurbita maxima])

HSP 1 Score: 280.4 bits (716), Expect = 5.0e-72
Identity = 148/220 (67.27%), Postives = 162/220 (73.64%), Query Frame = 0 

Query: 1   MDKVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFT 60
           MDK VKELLH ISEKQ K+MDSV+SAKDIP FI SFKDQINM EVKHP  YFKTFN+FF 
Sbjct: 369 MDKGVKELLHGISEKQGKRMDSVESAKDIPHFIESFKDQINMNEVKHPLEYFKTFNEFFI 428

Query: 61  RELKPGVRPIAHVEC--------------------------------VQGSLGQNISASA 120
           RELKP VRPIAHV+C                                VQG LGQ ISA A
Sbjct: 429 RELKPDVRPIAHVKCDDVAVCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGQEISAGA 488

Query: 121 FKDGSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSV 180
           F DG+LV+F+LAPQD+HRFHFPV GFIE IVDIPGCL T NPIAVN KYCNVFTENK SV
Sbjct: 489 FMDGTLVIFRLAPQDYHRFHFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSV 548

Query: 181 AIISTSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEEF 189
           AIIS+SDFGKV+FVAIG T+ GS+T  KG+G  V+KGEEF
Sbjct: 549 AIISSSDFGKVSFVAIGATMVGSITFTKGKGDYVKKGEEF 588

[Close]
BLAST of CsaV3_3G020620 vs. TAIR10
Match: AT5G57190.1 (phosphatidylserine decarboxylase 2)

HSP 1 Score: 226.1 bits (575), Expect = 2.0e-59
Identity = 119/219 (54.34%), Postives = 150/219 (68.49%), Query Frame = 0 

Query: 1   MDKVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFT 60
           MD+  KE+L  +SEKQ K+M SV+SA+ IPRF+  FKDQINM EVK+P  +FKTFN+FF 
Sbjct: 360 MDQGAKEILQRLSEKQGKKMSSVESAQKIPRFLEFFKDQINMAEVKYPLQHFKTFNEFFI 419

Query: 61  RELKPGVRPIA----------HVEC----------------------VQGSLGQNISASA 120
           RELKPG RPIA            +C                      ++G LG+N++ +A
Sbjct: 420 RELKPGARPIACMNRNDVAVCAADCRLMAFQSVEDSTRFWIKGKKFSIRGLLGKNVNPNA 479

Query: 121 FKDGSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSV 180
           F DGSLV+F+LAPQD+HRFH PV G IE  VD+ G L T NPIAVN KYCNVFTENK +V
Sbjct: 480 FLDGSLVIFRLAPQDYHRFHVPVSGVIEQFVDVSGSLYTVNPIAVNSKYCNVFTENKRTV 539

Query: 181 AIISTSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEE 188
           AIIST++FGKVAFVAIG T+ GS+   + +G +V+KG+E
Sbjct: 540 AIISTAEFGKVAFVAIGATMVGSINFVRKEGEHVKKGDE 578

[Close]
BLAST of CsaV3_3G020620 vs. TAIR10
Match: AT4G25970.1 (phosphatidylserine decarboxylase 3)

HSP 1 Score: 220.3 bits (560), Expect = 1.1e-57
Identity = 113/219 (51.60%), Postives = 151/219 (68.95%), Query Frame = 0 

Query: 1   MDKVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFT 60
           MD+  KE+L ++SEKQ K+M+SV+SA++IP F+  FKDQINM EVK+P ++FKTFN+FF 
Sbjct: 359 MDQGAKEILQNLSEKQGKKMNSVESAQNIPSFLEFFKDQINMAEVKYPLDHFKTFNEFFV 418

Query: 61  RELKPGVRPIAHVE--------------------------------CVQGSLGQNISASA 120
           RELKPG RPIA ++                                 ++G LG ++ + A
Sbjct: 419 RELKPGARPIACMDQDDVAVSAADCRLMAFQSVDDSTRFWIKGRKFSIKGLLGNDVQSDA 478

Query: 121 FKDGSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSV 180
           F DGSLV+F+LAPQD+HRFH PV G IE  V++ G L T NPIAVN KYCNVFTENK ++
Sbjct: 479 FLDGSLVIFRLAPQDYHRFHSPVSGVIEKFVNVSGSLYTVNPIAVNSKYCNVFTENKRTI 538

Query: 181 AIISTSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEE 188
            IIST++FGKVAFVAIG T+ GS++  + +G +V+KG+E
Sbjct: 539 VIISTAEFGKVAFVAIGATMVGSISFVRQEGDHVKKGDE 577

[Close]
BLAST of CsaV3_3G020620 vs. Swiss-Prot
Match: sp|F4KAK5|PSD2_ARATH (Phosphatidylserine decarboxylase proenzyme 2 OS=Arabidopsis thaliana OX=3702 GN=PSD2 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.6e-58
Identity = 119/219 (54.34%), Postives = 150/219 (68.49%), Query Frame = 0 

Query: 1   MDKVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFT 60
           MD+  KE+L  +SEKQ K+M SV+SA+ IPRF+  FKDQINM EVK+P  +FKTFN+FF 
Sbjct: 360 MDQGAKEILQRLSEKQGKKMSSVESAQKIPRFLEFFKDQINMAEVKYPLQHFKTFNEFFI 419

Query: 61  RELKPGVRPIA----------HVEC----------------------VQGSLGQNISASA 120
           RELKPG RPIA            +C                      ++G LG+N++ +A
Sbjct: 420 RELKPGARPIACMNRNDVAVCAADCRLMAFQSVEDSTRFWIKGKKFSIRGLLGKNVNPNA 479

Query: 121 FKDGSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSV 180
           F DGSLV+F+LAPQD+HRFH PV G IE  VD+ G L T NPIAVN KYCNVFTENK +V
Sbjct: 480 FLDGSLVIFRLAPQDYHRFHVPVSGVIEQFVDVSGSLYTVNPIAVNSKYCNVFTENKRTV 539

Query: 181 AIISTSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEE 188
           AIIST++FGKVAFVAIG T+ GS+   + +G +V+KG+E
Sbjct: 540 AIISTAEFGKVAFVAIGATMVGSINFVRKEGEHVKKGDE 578

[Close]
BLAST of CsaV3_3G020620 vs. Swiss-Prot
Match: sp|A4GNA8|PSD3_ARATH (Phosphatidylserine decarboxylase proenzyme 3 OS=Arabidopsis thaliana OX=3702 GN=PSD3 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.0e-56
Identity = 113/219 (51.60%), Postives = 151/219 (68.95%), Query Frame = 0 

Query: 1   MDKVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFT 60
           MD+  KE+L ++SEKQ K+M+SV+SA++IP F+  FKDQINM EVK+P ++FKTFN+FF 
Sbjct: 359 MDQGAKEILQNLSEKQGKKMNSVESAQNIPSFLEFFKDQINMAEVKYPLDHFKTFNEFFV 418

Query: 61  RELKPGVRPIAHVE--------------------------------CVQGSLGQNISASA 120
           RELKPG RPIA ++                                 ++G LG ++ + A
Sbjct: 419 RELKPGARPIACMDQDDVAVSAADCRLMAFQSVDDSTRFWIKGRKFSIKGLLGNDVQSDA 478

Query: 121 FKDGSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSV 180
           F DGSLV+F+LAPQD+HRFH PV G IE  V++ G L T NPIAVN KYCNVFTENK ++
Sbjct: 479 FLDGSLVIFRLAPQDYHRFHSPVSGVIEKFVNVSGSLYTVNPIAVNSKYCNVFTENKRTI 538

Query: 181 AIISTSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEE 188
            IIST++FGKVAFVAIG T+ GS++  + +G +V+KG+E
Sbjct: 539 VIISTAEFGKVAFVAIGATMVGSISFVRQEGDHVKKGDE 577

[Close]
BLAST of CsaV3_3G020620 vs. Swiss-Prot
Match: sp|Q5JN42|PSD2_ORYSJ (Phosphatidylserine decarboxylase proenzyme 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PSD2 PE=3 SV=3)

HSP 1 Score: 219.5 bits (558), Expect = 3.4e-56
Identity = 117/220 (53.18%), Postives = 146/220 (66.36%), Query Frame = 0 

Query: 1   MDKVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFT 60
           +D  VK+LL ++SEKQ K+M S +SAKDIP+F+  FKDQIN+ EVK P   FKTFN+FF 
Sbjct: 342 IDTGVKDLLKNLSEKQGKKMSSPESAKDIPKFLELFKDQINLDEVKDPLESFKTFNEFFV 401

Query: 61  RELKPGVRPIAHVE--------------------------------CVQGSLGQNISASA 120
           R+LKPG RPIA  E                                 ++G LG+++ + A
Sbjct: 402 RQLKPGARPIACYEQDTIATCAADSRLMTFSSVDESTRLWIKGRKFSIEGLLGKDVHSDA 461

Query: 121 FKDGSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSV 180
             +GSLV+F+LAPQD+HRFH PV G +E  V+IPGCL T NPIAVN KYCNVFTENK  V
Sbjct: 462 LCNGSLVIFRLAPQDYHRFHVPVSGTLEKFVEIPGCLYTVNPIAVNSKYCNVFTENKRVV 521

Query: 181 AIISTSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEEF 189
           +IISTS+FGKVAFVAIG T+ GS+   K +G  V KG+EF
Sbjct: 522 SIISTSEFGKVAFVAIGATMVGSIEFLKEEGDYVHKGDEF 561

[Close]
BLAST of CsaV3_3G020620 vs. Swiss-Prot
Match: sp|O14111|PSD3_SCHPO (Phosphatidylserine decarboxylase proenzyme 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=psd3 PE=3 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 5.7e-27
Identity = 82/215 (38.14%), Postives = 112/215 (52.09%), Query Frame = 0 

Query: 5   VKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFTRELK 64
           VK++L S++ KQ  + DS  S K+I  FI  F   +NM EV  P   FKTFN+FF R+LK
Sbjct: 692 VKKILRSLTLKQGMKYDSPISVKEIKPFIRFF--DLNMNEVDMPVGGFKTFNEFFYRKLK 751

Query: 65  PGVRP-----------------IAHVECVQGS---------------LGQNISASAFKDG 124
           PG RP                 I   EC++ +               LG +  A  F  G
Sbjct: 752 PGSRPCAFPDNPDILVSPADSRIVAYECIEKATTYWIKGTEFTVERLLGYSNEAQRFVGG 811

Query: 125 SLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSVAIIS 184
           S+ + +LAPQD+HRFH PV G I  I  I G   T NP+A+ R Y +VF EN   +  I 
Sbjct: 812 SICISRLAPQDYHRFHSPVNGCIGPITKIEGQYYTVNPMAI-RSYLDVFGENVRVLIPID 871

Query: 185 TSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEE 188
           +++FGKV  VA+G  + GS  L   +G  V++ +E
Sbjct: 872 SNEFGKVMLVAVGAMMVGSTVLTVDEGKIVQRSDE 903

[Close]
BLAST of CsaV3_3G020620 vs. Swiss-Prot
Match: sp|Q5AK66|PSD2_CANAL (Phosphatidylserine decarboxylase proenzyme 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=PSD2 PE=3 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 1.7e-26
Identity = 81/216 (37.50%), Postives = 112/216 (51.85%), Query Frame = 0 

Query: 3   KVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFTRE 62
           K V+ LL ++S KQ K+ D+ +S  DI  FI   K  ++  E+  PS  F TFNDFF R+
Sbjct: 734 KRVRILLKNMSIKQGKKFDAPQSKSDIASFIKFHKLDLDECEIDDPSQ-FATFNDFFYRK 793

Query: 63  LKPGVRPI----------AHVEC---------------VQGS------LGQNISASAFKD 122
           LKPG R I          +  +C               ++G+      L  N  +     
Sbjct: 794 LKPGAREIEDEKNSKIVTSPADCRSVVFESIDKATQLWIKGAGFTIPKLIHNDHSMRVSS 853

Query: 123 GSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSVAII 182
            +L +F+LAPQD+HRFH PV G IE I  I G   T NP+A+ R   +VF EN  ++  I
Sbjct: 854 YTLGIFRLAPQDYHRFHSPVDGVIESIKHIDGEYYTVNPMAI-RSELDVFGENVRTIVTI 913

Query: 183 STSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEE 188
            T DFG + F+A+G  + GS+ L K  G  + KGEE
Sbjct: 914 KTKDFGNIYFIAVGAMMVGSIVLTKDTGYEISKGEE 947

[Close]
BLAST of CsaV3_3G020620 vs. TrEMBL
Match: tr|A0A1S3C020|A0A1S3C020_CUCME (Phosphatidylserine decarboxylase proenzyme 2 OS=Cucumis melo OX=3656 GN=LOC103495456 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 3.8e-76
Identity = 155/220 (70.45%), Postives = 168/220 (76.36%), Query Frame = 0 

Query: 1   MDKVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFT 60
           MDK VKELL+SISEKQ K+MDSV+SAKDIP FI SFKDQINM EVKHP  YFKTFN+FF 
Sbjct: 375 MDKGVKELLYSISEKQGKRMDSVESAKDIPSFIESFKDQINMNEVKHPLEYFKTFNEFFI 434

Query: 61  RELKPGVRPIAHVEC--------------------------------VQGSLGQNISASA 120
           RELKPGVRPIAHVEC                                VQG LGQ+ISASA
Sbjct: 435 RELKPGVRPIAHVECDDVAVCAADCRLMAFKSIDDSLRLWIKGRKFSVQGLLGQDISASA 494

Query: 121 FKDGSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSV 180
           F DG+LV+F+LAPQD+HRFHFPV GFIE IVDIPGCL T NPIAVN KYCNVFTENK SV
Sbjct: 495 FMDGTLVIFRLAPQDYHRFHFPVSGFIEQIVDIPGCLYTVNPIAVNSKYCNVFTENKRSV 554

Query: 181 AIISTSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEEF 189
           AIISTSDFGKVAFVAIG T+ GS+T KKG+G NV+KGEEF
Sbjct: 555 AIISTSDFGKVAFVAIGATMVGSITFKKGKGDNVKKGEEF 594

[Close]
BLAST of CsaV3_3G020620 vs. TrEMBL
Match: tr|A0A2P4MYT1|A0A2P4MYT1_QUESU (Phosphatidylserine decarboxylase proenzyme 2 OS=Quercus suber OX=58331 GN=PSD2 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 4.5e-61
Identity = 127/220 (57.73%), Postives = 153/220 (69.55%), Query Frame = 0 

Query: 1   MDKVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFT 60
           MD   KELL SISEKQ ++M S +S KDIP+F+ SFKDQIN+ EVK+P  +FKTFN+FF 
Sbjct: 364 MDTGAKELLQSISEKQGRRMSSTESTKDIPKFVESFKDQINLAEVKYPLEHFKTFNEFFI 423

Query: 61  RELKPGVRPIAHVE--------------------------------CVQGSLGQNISASA 120
           RELKPG RPIA +E                                 +QG LGQ++S+SA
Sbjct: 424 RELKPGARPIACMERDDVAVCAADSRLMAFKSADESLRFWIKGRKFSIQGLLGQDVSSSA 483

Query: 121 FKDGSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSV 180
           F DG LV+F+LAPQD+HRFHFPV G IE  V+IPGCL T NPIAVN KYCNVFTENK  V
Sbjct: 484 FVDGPLVIFRLAPQDYHRFHFPVSGTIEQFVNIPGCLYTVNPIAVNSKYCNVFTENKRVV 543

Query: 181 AIISTSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEEF 189
           +IIST+DFGKVAFVAIG T+ GS++  K +G +V KG+EF
Sbjct: 544 SIISTADFGKVAFVAIGATMVGSISFSKEKGDHVRKGDEF 583

[Close]
BLAST of CsaV3_3G020620 vs. TrEMBL
Match: tr|V7BTS2|V7BTS2_PHAVU (Phosphatidylserine decarboxylase proenzyme 2 OS=Phaseolus vulgaris OX=3885 GN=PSD2 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 7.6e-61
Identity = 128/220 (58.18%), Postives = 153/220 (69.55%), Query Frame = 0 

Query: 1   MDKVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFT 60
           MD  VKELL SISEKQ  +MDS +S+ DIP+FI SFKDQIN+ EVK+P  +FKTFN+FF 
Sbjct: 357 MDIGVKELLQSISEKQGARMDSPESSADIPKFIESFKDQINLAEVKYPLEHFKTFNEFFI 416

Query: 61  RELKPGVRPIAHVE--------------------------------CVQGSLGQNISASA 120
           RELKPG RPIA  E                                 VQG LG+++ +SA
Sbjct: 417 RELKPGSRPIASAESADIAVCAADCRLSAFKSVDDSKRFWIKGRKFSVQGLLGKDMCSSA 476

Query: 121 FKDGSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSV 180
           F DG++V+F+LAPQD+HRFHFPV G +E  VDIPGCL T NPIAVN KYCNVFTENK  V
Sbjct: 477 FVDGTMVIFRLAPQDYHRFHFPVSGIVEQFVDIPGCLYTVNPIAVNSKYCNVFTENKRVV 536

Query: 181 AIISTSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEEF 189
           +IIST +FGKVAFVAIG T+ GS+T  K +G NV+KG+EF
Sbjct: 537 SIISTENFGKVAFVAIGATMVGSITFTKKKGDNVQKGDEF 576

[Close]
BLAST of CsaV3_3G020620 vs. TrEMBL
Match: tr|A0A2R6Q6E0|A0A2R6Q6E0_ACTCH (Phosphatidylserine decarboxylase proenzyme 2 OS=Actinidia chinensis var. chinensis OX=1590841 GN=PSD2 PE=3 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.7e-60
Identity = 131/220 (59.55%), Postives = 154/220 (70.00%), Query Frame = 0 

Query: 1   MDKVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFT 60
           MDK  KELL SISEKQ K+M SV+SA+DIP+FI  FKDQINM EVK+P  +FKTFNDFF 
Sbjct: 369 MDKGAKELLESISEKQGKKMASVESAEDIPKFIEFFKDQINMAEVKYPLEHFKTFNDFFI 428

Query: 61  RELKPGVRPIA--------------------HVE------------CVQGSLGQNISASA 120
           RELKPG RPI+                    +VE             + G LG+ IS++A
Sbjct: 429 RELKPGARPISCTGHDDVAVCAADSRLMAFRNVEDSLRFWIKGQRFSIHGLLGKEISSTA 488

Query: 121 FKDGSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSV 180
           F DGSLV+F+LAPQD+HRFH PV G IE  VDIPG L T NPIAVN KYCNVFTENK +V
Sbjct: 489 FLDGSLVIFRLAPQDYHRFHLPVSGTIENFVDIPGSLYTVNPIAVNSKYCNVFTENKRAV 548

Query: 181 AIISTSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEEF 189
           AIIST DFGKVAFVAIG T+ GS+T  K +G +++KG+EF
Sbjct: 549 AIISTRDFGKVAFVAIGATMVGSITFTKKKGDHIQKGDEF 588

[Close]
BLAST of CsaV3_3G020620 vs. TrEMBL
Match: tr|A0A1R3KGC4|A0A1R3KGC4_COCAP (Phosphatidylserine decarboxylase proenzyme 2 OS=Corchorus capsularis OX=210143 GN=PSD2 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.2e-60
Identity = 127/220 (57.73%), Postives = 153/220 (69.55%), Query Frame = 0 

Query: 1   MDKVVKELLHSISEKQRKQMDSVKSAKDIPRFIVSFKDQINMIEVKHPSNYFKTFNDFFT 60
           MDK  KE+L SISE+Q +QM+SV+SAKDIP+F+  FKDQINM EVK+P  +FKTFN+FF 
Sbjct: 368 MDKGAKEILQSISERQGRQMNSVESAKDIPKFLEFFKDQINMAEVKYPLEHFKTFNEFFV 427

Query: 61  RELKPGVRPIAHVE--------------------------------CVQGSLGQNISASA 120
           RELKPG RPIA +E                                 VQG LG+ I +SA
Sbjct: 428 RELKPGARPIASMERDDVAVCAADSRLMAFKSVQDSLRLWIKGRKFSVQGLLGKEICSSA 487

Query: 121 FKDGSLVLFQLAPQDFHRFHFPVFGFIELIVDIPGCLCTDNPIAVNRKYCNVFTENKYSV 180
           F DG+LV+ +LAPQD+HRFH PV G IE  +DIPGCL T NPIAVN KYCNVFTENK  V
Sbjct: 488 FVDGTLVILRLAPQDYHRFHVPVSGTIEKFIDIPGCLYTVNPIAVNSKYCNVFTENKRVV 547

Query: 181 AIISTSDFGKVAFVAIGNTLAGSLTLKKGQGVNVEKGEEF 189
           +IIST++FGKVAFVAIG T+ GS+T  K +G  V+KG+EF
Sbjct: 548 SIISTAEFGKVAFVAIGATMVGSITFLKKEGDIVKKGDEF 587

The following BLAST results are available for this feature:
BLAST of CsaV3_3G020620 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008455245.15.7e-7670.45PREDICTED: phosphatidylserine decarboxylase proenzyme 2-like [Cucumis melo][more]
XP_011658767.16.3e-7570.00PREDICTED: phosphatidylserine decarboxylase proenzyme 2 [Cucumis sativus][more]
XP_022963616.12.6e-7368.64phosphatidylserine decarboxylase proenzyme 2-like [Cucurbita moschata][more]
XP_023553974.12.6e-7368.64phosphatidylserine decarboxylase proenzyme 2-like [Cucurbita pepo subsp. pepo][more]
XP_022967583.15.0e-7267.27phosphatidylserine decarboxylase proenzyme 2-like [Cucurbita maxima][more]
BLAST of CsaV3_3G020620 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G57190.12.0e-5954.34phosphatidylserine decarboxylase 2[more]
AT4G25970.11.1e-5751.60phosphatidylserine decarboxylase 3[more]
BLAST of CsaV3_3G020620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|F4KAK5|PSD2_ARATH3.6e-5854.34Phosphatidylserine decarboxylase proenzyme 2 OS=Arabidopsis thaliana OX=3702 GN=... [more]
sp|A4GNA8|PSD3_ARATH2.0e-5651.60Phosphatidylserine decarboxylase proenzyme 3 OS=Arabidopsis thaliana OX=3702 GN=... [more]
sp|Q5JN42|PSD2_ORYSJ3.4e-5653.18Phosphatidylserine decarboxylase proenzyme 2 OS=Oryza sativa subsp. japonica OX=... [more]
sp|O14111|PSD3_SCHPO5.7e-2738.14Phosphatidylserine decarboxylase proenzyme 3 OS=Schizosaccharomyces pombe (strai... [more]
sp|Q5AK66|PSD2_CANAL1.7e-2637.50Phosphatidylserine decarboxylase proenzyme 2 OS=Candida albicans (strain SC5314 ... [more]
BLAST of CsaV3_3G020620 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C020|A0A1S3C020_CUCME3.8e-7670.45Phosphatidylserine decarboxylase proenzyme 2 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
tr|A0A2P4MYT1|A0A2P4MYT1_QUESU4.5e-6157.73Phosphatidylserine decarboxylase proenzyme 2 OS=Quercus suber OX=58331 GN=PSD2 P... [more]
tr|V7BTS2|V7BTS2_PHAVU7.6e-6158.18Phosphatidylserine decarboxylase proenzyme 2 OS=Phaseolus vulgaris OX=3885 GN=PS... [more]
tr|A0A2R6Q6E0|A0A2R6Q6E0_ACTCH1.7e-6059.55Phosphatidylserine decarboxylase proenzyme 2 OS=Actinidia chinensis var. chinens... [more]
tr|A0A1R3KGC4|A0A1R3KGC4_COCAP2.2e-6057.73Phosphatidylserine decarboxylase proenzyme 2 OS=Corchorus capsularis OX=210143 G... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008654phospholipid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004609phosphatidylserine decarboxylase activity
Vocabulary: INTERPRO
TermDefinition
IPR003817PS_Dcarbxylase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0006544 glycine metabolic process
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0008654 phospholipid biosynthetic process
biological_process GO:0006566 threonine metabolic process
biological_process GO:0006646 phosphatidylethanolamine biosynthetic process
biological_process GO:0016540 protein autoprocessing
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0004609 phosphatidylserine decarboxylase activity
molecular_function GO:0005509 calcium ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G020620.1CsaV3_3G020620.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003817Phosphatidylserine decarboxylase-relatedPFAMPF02666PS_Dcarbxylasecoord: 86..188
e-value: 2.6E-20
score: 72.7
IPR003817Phosphatidylserine decarboxylase-relatedPANTHERPTHR10067PHOSPHATIDYLSERINE DECARBOXYLASEcoord: 80..188
IPR003817Phosphatidylserine decarboxylase-relatedPANTHERPTHR10067PHOSPHATIDYLSERINE DECARBOXYLASEcoord: 2..73
NoneNo IPR availablePANTHERPTHR10067:SF2PHOSPHATIDYLSERINE DECARBOXYLASE PROENZYME 2coord: 2..73
NoneNo IPR availablePANTHERPTHR10067:SF2PHOSPHATIDYLSERINE DECARBOXYLASE PROENZYME 2coord: 80..188

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G020620Cucsa.031400Cucumber (Gy14) v1cgycucB006
CsaV3_3G020620CsGy3G020310Cucumber (Gy14) v2cgybcucB117
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G020620Silver-seed gourdcarcucB0518
CsaV3_3G020620Silver-seed gourdcarcucB0801
CsaV3_3G020620Cucurbita maxima (Rimu)cmacucB0281
CsaV3_3G020620Cucurbita maxima (Rimu)cmacucB0547
CsaV3_3G020620Cucurbita moschata (Rifu)cmocucB0272
CsaV3_3G020620Cucurbita moschata (Rifu)cmocucB0532
CsaV3_3G020620Cucurbita pepo (Zucchini)cpecucB0686
CsaV3_3G020620Cucurbita pepo (Zucchini)cpecucB0749
CsaV3_3G020620Wild cucumber (PI 183967)cpicucB144
CsaV3_3G020620Bottle gourd (USVL1VR-Ls)cuclsiB231
CsaV3_3G020620Melon (DHL92) v3.5.1cucmeB249
CsaV3_3G020620Melon (DHL92) v3.6.1cucmedB235
CsaV3_3G020620Watermelon (Charleston Gray)cucwcgB234
CsaV3_3G020620Watermelon (Charleston Gray)cucwcgB241
CsaV3_3G020620Watermelon (97103) v1cucwmB256
CsaV3_3G020620Watermelon (97103) v2cucwmbB216
CsaV3_3G020620Watermelon (97103) v2cucwmbB220
CsaV3_3G020620Wax gourdcucwgoB274