CsaV3_3G020600 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G020600
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionpumilio homolog 15-like
Locationchr3 : 16699814 .. 16700233 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATAAGAAATGTGGTGGTTTTGTGGCTTGCCACAGCAGCTTTGGTCGGGGCTCAAGTCCCGAGTTGGTCAGTTTCGATCATAAACGGGCTTAGTCACCTCGATTTGAATGTGCATTGTCAATCAAAGAATGATGATTTGGGAAATCATCATTTGGTTAAACATGGAGATACTTATAAATGGAGCTTTAAGGAAAACTTTTGGGGAACAACTTTGTTTTGGTGTACATTGGAGAAGTCAGATGCATACGTCTCTTTTGAAGTCTTTTGGCCTGAGTCATGGAGTAACACTTGGCTTCGTGATAGGTGTGGGCCTGAAGCAACTTGTATTTGGGTTGCTAAAGATGGTGGAATTTATTTGAAAAACAACCCCGCTAATCGTGATGAATTTATTCACAAATGGTGGATCGGTAAGTAA

mRNA sequence

ATGATGATAAGAAATGTGGTGGTTTTGTGGCTTGCCACAGCAGCTTTGGTCGGGGCTCAAGTCCCGAGTTGGTCAGTTTCGATCATAAACGGGCTTAGTCACCTCGATTTGAATGTGCATTGTCAATCAAAGAATGATGATTTGGGAAATCATCATTTGGTTAAACATGGAGATACTTATAAATGGAGCTTTAAGGAAAACTTTTGGGGAACAACTTTGTTTTGGTGTACATTGGAGAAGTCAGATGCATACGTCTCTTTTGAAGTCTTTTGGCCTGAGTCATGGAGTAACACTTGGCTTCGTGATAGGTGTGGGCCTGAAGCAACTTGTATTTGGGTTGCTAAAGATGGTGGAATTTATTTGAAAAACAACCCCGCTAATCGTGATGAATTTATTCACAAATGGTGGATCGGTAAGTAA

Coding sequence (CDS)

ATGATGATAAGAAATGTGGTGGTTTTGTGGCTTGCCACAGCAGCTTTGGTCGGGGCTCAAGTCCCGAGTTGGTCAGTTTCGATCATAAACGGGCTTAGTCACCTCGATTTGAATGTGCATTGTCAATCAAAGAATGATGATTTGGGAAATCATCATTTGGTTAAACATGGAGATACTTATAAATGGAGCTTTAAGGAAAACTTTTGGGGAACAACTTTGTTTTGGTGTACATTGGAGAAGTCAGATGCATACGTCTCTTTTGAAGTCTTTTGGCCTGAGTCATGGAGTAACACTTGGCTTCGTGATAGGTGTGGGCCTGAAGCAACTTGTATTTGGGTTGCTAAAGATGGTGGAATTTATTTGAAAAACAACCCCGCTAATCGTGATGAATTTATTCACAAATGGTGGATCGGTAAGTAA

Protein sequence

MMIRNVVVLWLATAALVGAQVPSWSVSIINGLSHLDLNVHCQSKNDDLGNHHLVKHGDTYKWSFKENFWGTTLFWCTLEKSDAYVSFEVFWPESWSNTWLRDRCGPEATCIWVAKDGGIYLKNNPANRDEFIHKWWIGK
Homology
[Close]
BLAST of CsaV3_3G020600 vs. NCBI nr
Match: XP_004139725.1 (PREDICTED: uncharacterized protein LOC101205959 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 5.8e-77
Identity = 130/139 (93.53%), Postives = 133/139 (95.68%), Query Frame = 0 

Query: 1   MMIRNVVVLWLATAALVGAQVPSWSVSIINGLSHLDLNVHCQSKNDDLGNHHLVKHGDTY 60
           MMIRN VVLWLATAALVGAQVPSWSVSI+NGLSHLDLNVHCQSKNDDLGNHHLVK GD Y
Sbjct: 6   MMIRNGVVLWLATAALVGAQVPSWSVSIVNGLSHLDLNVHCQSKNDDLGNHHLVKRGDIY 65

Query: 61  KWSFKENFWGTTLFWCTLEKSDAYVSFEVFWPESWSNTWLRDRCGPEATCIWVAKDGGIY 120
           KW+FKENFWGTTLFWC LEKSDAYVSFE FWPESWSNTWLRDRCGPE TCIWVAKDGGIY
Sbjct: 66  KWNFKENFWGTTLFWCKLEKSDAYVSFETFWPESWSNTWLRDRCGPEGTCIWVAKDGGIY 125

Query: 121 LKNNPANRDEFIHKWWIGK 140
           LKNNPANRDEF+HKWWIGK
Sbjct: 126 LKNNPANRDEFVHKWWIGK 144

[Close]
BLAST of CsaV3_3G020600 vs. NCBI nr
Match: XP_008462118.1 (PREDICTED: pumilio homolog 15-like [Cucumis melo])

HSP 1 Score: 294.7 bits (753), Expect = 1.7e-76
Identity = 129/139 (92.81%), Postives = 134/139 (96.40%), Query Frame = 0 

Query: 1   MMIRNVVVLWLATAALVGAQVPSWSVSIINGLSHLDLNVHCQSKNDDLGNHHLVKHGDTY 60
           MM+RNVVVLWLATAALVGAQVPSWSVSI+N LSHLDLNVHC+SKNDDLGNHHLVK GD Y
Sbjct: 6   MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKRGDIY 65

Query: 61  KWSFKENFWGTTLFWCTLEKSDAYVSFEVFWPESWSNTWLRDRCGPEATCIWVAKDGGIY 120
           KWSFKENFWGTTLFWCTLEKSDAYVSFE FWPESW+NTWLRDRCGPE TCIWVAKDGGIY
Sbjct: 66  KWSFKENFWGTTLFWCTLEKSDAYVSFESFWPESWTNTWLRDRCGPEGTCIWVAKDGGIY 125

Query: 121 LKNNPANRDEFIHKWWIGK 140
           LKNNPANRDEF+HKWWIGK
Sbjct: 126 LKNNPANRDEFVHKWWIGK 144

[Close]
BLAST of CsaV3_3G020600 vs. NCBI nr
Match: XP_008462113.1 (PREDICTED: uncharacterized protein LOC103500541 [Cucumis melo])

HSP 1 Score: 231.9 bits (590), Expect = 1.4e-57
Identity = 100/136 (73.53%), Postives = 117/136 (86.03%), Query Frame = 0 

Query: 1   MMIRNVVVLWLATAALVGAQVPSWSVSIINGLSHLDLNVHCQSKNDDLGNHHLVKHGDTY 60
           MM+RN++VLWLAT A+VGAQ+P WSV ++NGLS+L L+VHCQS NDDLG H+LV  GD +
Sbjct: 8   MMMRNMIVLWLATVAMVGAQLPRWSVRMVNGLSYLGLDVHCQSGNDDLGYHYLVNRGDDF 67

Query: 61  KWSFKENFWGTTLFWCTLEKSDAYVSFEVFWPESWSNTWLRDRCG-PEATCIWVAKDGGI 120
           KWSF+ENFWGTTLFWC LEK+DAYVSFE FWPES  NTWLRDRCG  + TCIW+AKD GI
Sbjct: 68  KWSFQENFWGTTLFWCRLEKADAYVSFESFWPESLENTWLRDRCGTTQLTCIWIAKDDGI 127

Query: 121 YLKNNPANRDEFIHKW 136
           YL+NNP N DEF+HKW
Sbjct: 128 YLRNNPTNVDEFVHKW 143

[Close]
BLAST of CsaV3_3G020600 vs. NCBI nr
Match: XP_004139723.1 (PREDICTED: uncharacterized protein LOC101205494 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 1.2e-50
Identity = 89/121 (73.55%), Postives = 100/121 (82.64%), Query Frame = 0 

Query: 16  LVGAQVPSWSVSIINGLSHLDLNVHCQSKNDDLGNHHLVKHGDTYKWSFKENFWGTTLFW 75
           +V  Q+P WSV  +NGLS+L L+VHCQS +DDLG HHLV HGD Y+WSF+ENFWGTTLFW
Sbjct: 1   MVRGQLPRWSVQTVNGLSYLGLDVHCQSGDDDLGYHHLVNHGDDYQWSFQENFWGTTLFW 60

Query: 76  CTLEKSDAYVSFEVFWPESWSNTWLRDRCG-PEATCIWVAKDGGIYLKNNPANRDEFIHK 135
           C LEK DAYVSFE FWPES  NTWLRDRCG  E TCIW+AKD GIYL+NNP N DEF+HK
Sbjct: 61  CRLEKVDAYVSFESFWPESLKNTWLRDRCGTTELTCIWIAKDDGIYLRNNPTNVDEFVHK 120

[Close]
BLAST of CsaV3_3G020600 vs. NCBI nr
Match: XP_016903452.1 (PREDICTED: uncharacterized protein LOC103503421 [Cucumis melo])

HSP 1 Score: 203.8 bits (517), Expect = 3.9e-49
Identity = 92/145 (63.45%), Postives = 107/145 (73.79%), Query Frame = 0 

Query: 1   MMIRNVVVLWLATAALVGAQVPSWS----------VSIINGLSHLDLNVHCQSKNDDLGN 60
           MM+RNVVVLWLA   LV  QV  WS          V ++NGLS+  L+VHCQSK+DDLG 
Sbjct: 1   MMMRNVVVLWLAMMVLVEGQVSKWSKPPPLPSRYFVHVVNGLSYQSLDVHCQSKDDDLGY 60

Query: 61  HHLVKHGDTYKWSFKENFWGTTLFWCTLEKSDAYVSFEVFWPESWSNTWLRDRCGPEATC 120
           H LVK GD ++W+F+ENFWGTTLFWC LEK DAYV+FE FWPE+  N WLR RCG + TC
Sbjct: 61  HRLVKQGDEFQWNFEENFWGTTLFWCRLEKPDAYVAFESFWPET-KNVWLRHRCGNQGTC 120

Query: 121 IWVAKDGGIYLKNNPANRDEFIHKW 136
           IW AKD GIYL+N P N DEF+HKW
Sbjct: 121 IWTAKDDGIYLRNMPTNADEFVHKW 144

[Close]
BLAST of CsaV3_3G020600 vs. TAIR10
Match: AT4G16295.1 (S-protein homologue 1)

HSP 1 Score: 94.7 bits (234), Expect = 4.7e-20
Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = 0 

Query: 5   NVVVLWLATAALVGAQVPSWSVSIINGLSHLD-LNVHCQSKNDDLGNHHLVKHGDTYKWS 64
           +V+V    T  ++  ++  W V+++NGL+  + L +HC+SK DDLG  +L K  + + W+
Sbjct: 22  HVLVGGTTTRDIIVPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINL-KFRNRFSWN 81

Query: 65  FKENFWGTTLFWCTLEKSDAYVSFEVFWPESWSNTWLRDRCGPEATCIWVAKDGGIYLKN 124
           F EN   +T FWC + K + +++  VF    W +  L  RCG +  CIW AK  G+YL N
Sbjct: 82  FGENMLHSTFFWCYMNKDNGHMNVNVF----WDDVILFHRCGWK-NCIWTAKTDGLYLWN 141

Query: 125 NPANRDEFIHKWWIG 139
           + +  D    KW +G
Sbjct: 142 SASGEDVLSRKWEVG 150

[Close]
BLAST of CsaV3_3G020600 vs. TAIR10
Match: AT1G28305.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 67.8 bits (164), Expect = 6.1e-12
Identity = 34/102 (33.33%), Postives = 51/102 (50.00%), Query Frame = 0 

Query: 34  HLDLNVHCQSKNDDLGNHHLVKHGDTYKWSFKENFWGTTLFWCTLEKSDAYVSFEVFWPE 93
           H DL V C+S   D+G H+ VK+G  Y++  ++NFW TTLFWCT      Y + + F   
Sbjct: 38  HSDLFVQCKSGKADMGKHY-VKYGKIYQFDIRDNFWKTTLFWCTFRHGPDYRTGQQFDVY 97

Query: 94  SWSNTWLRDRCGPEATCIWVAKDGGIYLKNNPANRDEFIHKW 136
            +     +       T  W A++ GIY + N     + +H W
Sbjct: 98  EY-----KPGVAQGGTYEWTAREDGIYFRLNQGTIHK-VHNW 132

[Close]
BLAST of CsaV3_3G020600 vs. TAIR10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 67.4 bits (163), Expect = 8.0e-12
Identity = 35/106 (33.02%), Postives = 58/106 (54.72%), Query Frame = 0 

Query: 30  NGLSHLDLNVHCQSKNDDLGNHHLVKHGDTYKWSFKENFWGTTLFWCTLEKSDAYVSFEV 89
           N L++  L V C+SK+D+LG+ H+++ G   K +F +N W  TLFWC L K   +     
Sbjct: 28  NELNNKVLGVRCRSKDDNLGD-HILRVGQMTKNNFDDNVWRRTLFWCNLWKGPDFKLHVA 87

Query: 90  FWPESWSNTWLRDRCGPEATCIWVAKDGGIYLKNNPANRDEFIHKW 136
           F  +++ + W  D  GP    +W+A++ GIY   +P    +  + W
Sbjct: 88  F--DAYRSQWKAD-IGPR--YLWIAREDGIYYTQHPETPPKKKYDW 127

[Close]
BLAST of CsaV3_3G020600 vs. TAIR10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 65.9 bits (159), Expect = 2.3e-11
Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 0 

Query: 37  LNVHCQSKNDDLGNHHLVKHGDTYKWSFKENFWGTTLFWCTLEKSDAYVSFEVFWPESWS 96
           L VHC+SKN+D+G  +L K G+   +SFK NFWGTT FWC L K   Y  +         
Sbjct: 40  LKVHCKSKNNDIGVKYL-KIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYRGITAYQAI 99

Query: 97  NTWLRDRCGPEATCIWVAKDGGIY 121
             + +D     ++  W+A+D GIY
Sbjct: 100 GLFAKD----GSSYNWLARDDGIY 118

[Close]
BLAST of CsaV3_3G020600 vs. TAIR10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 65.5 bits (158), Expect = 3.0e-11
Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 0 

Query: 26  VSIINGLSHLD-LNVHCQSKNDDLGNHHLVKHGDTYKWSFKENFWGTTLFWCTLEKSDAY 85
           V + N L H   L VHC+SK+DDLG  H++K G  Y+++F +N W TT F C +++   +
Sbjct: 29  VVLSNQLEHSKLLKVHCRSKDDDLG-EHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNF 88

Query: 86  ---VSFEVFWPESWSNTWLRDRCGPEATCIWVAKDGGIYLKNN 125
              + F V +  SWS          EA+C W+ ++ GIY   +
Sbjct: 89  KHHLDF-VAYETSWSKAL-------EASCKWIGREDGIYFSQD 122

[Close]
BLAST of CsaV3_3G020600 vs. Swiss-Prot
Match: sp|F4JLS0|SPH1_ARATH (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.4e-19
Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = 0 

Query: 5   NVVVLWLATAALVGAQVPSWSVSIINGLSHLD-LNVHCQSKNDDLGNHHLVKHGDTYKWS 64
           +V+V    T  ++  ++  W V+++NGL+  + L +HC+SK DDLG  +L K  + + W+
Sbjct: 22  HVLVGGTTTRDIIVPKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINL-KFRNRFSWN 81

Query: 65  FKENFWGTTLFWCTLEKSDAYVSFEVFWPESWSNTWLRDRCGPEATCIWVAKDGGIYLKN 124
           F EN   +T FWC + K + +++  VF    W +  L  RCG +  CIW AK  G+YL N
Sbjct: 82  FGENMLHSTFFWCYMNKDNGHMNVNVF----WDDVILFHRCGWK-NCIWTAKTDGLYLWN 141

Query: 125 NPANRDEFIHKWWIG 139
           + +  D    KW +G
Sbjct: 142 SASGEDVLSRKWEVG 150

[Close]
BLAST of CsaV3_3G020600 vs. Swiss-Prot
Match: sp|Q9LW22|SPH21_ARATH (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.2e-10
Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 0 

Query: 37  LNVHCQSKNDDLGNHHLVKHGDTYKWSFKENFWGTTLFWCTLEKSDAYVSFEVFWPESWS 96
           L VHC+SKN+D+G  +L K G+   +SFK NFWGTT FWC L K   Y  +         
Sbjct: 40  LKVHCKSKNNDIGVKYL-KIGEVMSFSFKTNFWGTTEFWCNLYKGPDYKRYRGITAYQAI 99

Query: 97  NTWLRDRCGPEATCIWVAKDGGIY 121
             + +D     ++  W+A+D GIY
Sbjct: 100 GLFAKD----GSSYNWLARDDGIY 118

[Close]
BLAST of CsaV3_3G020600 vs. Swiss-Prot
Match: sp|F4JLQ5|SPH2_ARATH (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.3e-07
Identity = 32/112 (28.57%), Postives = 61/112 (54.46%), Query Frame = 0 

Query: 25  SVSIINGL-SHLDLNVHCQSKNDDLGNHHLVKHGDTYKWSFKENFWGTTLFWCTLEKSDA 84
           +V I N L + L L  HC+SK+DDLGN  L + G+++ +SF   F+G TL++C+    + 
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTL-QPGESWSFSFGRQFFGRTLYFCSFSWPNE 108

Query: 85  YVSFEVFWPESWSNTWLRDRCGPEATCIWVAKDGGIYLKNNPANRDEFIHKW 136
             SF+++  +   ++   ++C  +  C+W  +  G    N+   + +  + W
Sbjct: 109 SHSFDIY--KDHRDSGGDNKCESD-RCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]
BLAST of CsaV3_3G020600 vs. Swiss-Prot
Match: sp|P0DN92|SPH24_ARATH (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.3e-07
Identity = 37/113 (32.74%), Postives = 55/113 (48.67%), Query Frame = 0 

Query: 26  VSIINGLSHLDLNVHCQSKNDDLGNHHLVKHGDTYKWSFKENFWGTTLFWCTLEKSDAYV 85
           V+I N   +L L +HC+S++DDLG H L K G+ + W F  NF  +TL++C   +     
Sbjct: 48  VTIQNDNDYL-LGIHCKSRDDDLGFHILAK-GELFGWKFHVNFCYSTLYFCGFSQGQMKK 107

Query: 86  S-FEVFWPESWSNTWLRD--RCGPEATCIWVAKDGGIYLKNNPANRDEFIHKW 136
             FE++          RD  RC   A C W A+  GIY  +    +    + W
Sbjct: 108 GVFEIYRAN-------RDFYRC---ANCTWKAEKDGIYGYSEDPVKGYLFYNW 148

[Close]
BLAST of CsaV3_3G020600 vs. Swiss-Prot
Match: sp|O23020|SPH5_ARATH (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 25/76 (32.89%), Postives = 42/76 (55.26%), Query Frame = 0 

Query: 18 GAQVPSWSVSII---NGLSHLDLNVHCQSKNDDLGNHHLVKHGDTYKWSFKENFWGTTLF 77
          G   P W  +++   N +    L +HC+SK DDLG  H+V     Y + F+ N W +TLF
Sbjct: 20 GGLPPFWRATVVTMTNLIGGPPLTIHCKSKQDDLG-IHVVPFKQEYHFKFQPNLWKSTLF 79

Query: 78 WCTLEKSDAYVSFEVF 91
          +C+ +    + SF+++
Sbjct: 80 FCSFQWDSQFKSFDIY 94

[Close]
BLAST of CsaV3_3G020600 vs. TrEMBL
Match: tr|A0A1S3CGQ6|A0A1S3CGQ6_CUCME (pumilio homolog 15-like OS=Cucumis melo OX=3656 GN=LOC103500548 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.1e-76
Identity = 129/139 (92.81%), Postives = 134/139 (96.40%), Query Frame = 0 

Query: 1   MMIRNVVVLWLATAALVGAQVPSWSVSIINGLSHLDLNVHCQSKNDDLGNHHLVKHGDTY 60
           MM+RNVVVLWLATAALVGAQVPSWSVSI+N LSHLDLNVHC+SKNDDLGNHHLVK GD Y
Sbjct: 6   MMMRNVVVLWLATAALVGAQVPSWSVSIVNELSHLDLNVHCRSKNDDLGNHHLVKRGDIY 65

Query: 61  KWSFKENFWGTTLFWCTLEKSDAYVSFEVFWPESWSNTWLRDRCGPEATCIWVAKDGGIY 120
           KWSFKENFWGTTLFWCTLEKSDAYVSFE FWPESW+NTWLRDRCGPE TCIWVAKDGGIY
Sbjct: 66  KWSFKENFWGTTLFWCTLEKSDAYVSFESFWPESWTNTWLRDRCGPEGTCIWVAKDGGIY 125

Query: 121 LKNNPANRDEFIHKWWIGK 140
           LKNNPANRDEF+HKWWIGK
Sbjct: 126 LKNNPANRDEFVHKWWIGK 144

[Close]
BLAST of CsaV3_3G020600 vs. TrEMBL
Match: tr|A0A1S3CG44|A0A1S3CG44_CUCME (uncharacterized protein LOC103500541 OS=Cucumis melo OX=3656 GN=LOC103500541 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 9.0e-58
Identity = 100/136 (73.53%), Postives = 117/136 (86.03%), Query Frame = 0 

Query: 1   MMIRNVVVLWLATAALVGAQVPSWSVSIINGLSHLDLNVHCQSKNDDLGNHHLVKHGDTY 60
           MM+RN++VLWLAT A+VGAQ+P WSV ++NGLS+L L+VHCQS NDDLG H+LV  GD +
Sbjct: 8   MMMRNMIVLWLATVAMVGAQLPRWSVRMVNGLSYLGLDVHCQSGNDDLGYHYLVNRGDDF 67

Query: 61  KWSFKENFWGTTLFWCTLEKSDAYVSFEVFWPESWSNTWLRDRCG-PEATCIWVAKDGGI 120
           KWSF+ENFWGTTLFWC LEK+DAYVSFE FWPES  NTWLRDRCG  + TCIW+AKD GI
Sbjct: 68  KWSFQENFWGTTLFWCRLEKADAYVSFESFWPESLENTWLRDRCGTTQLTCIWIAKDDGI 127

Query: 121 YLKNNPANRDEFIHKW 136
           YL+NNP N DEF+HKW
Sbjct: 128 YLRNNPTNVDEFVHKW 143

[Close]
BLAST of CsaV3_3G020600 vs. TrEMBL
Match: tr|A0A1S4E5F6|A0A1S4E5F6_CUCME (uncharacterized protein LOC103503421 OS=Cucumis melo OX=3656 GN=LOC103503421 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.6e-49
Identity = 92/145 (63.45%), Postives = 107/145 (73.79%), Query Frame = 0 

Query: 1   MMIRNVVVLWLATAALVGAQVPSWS----------VSIINGLSHLDLNVHCQSKNDDLGN 60
           MM+RNVVVLWLA   LV  QV  WS          V ++NGLS+  L+VHCQSK+DDLG 
Sbjct: 1   MMMRNVVVLWLAMMVLVEGQVSKWSKPPPLPSRYFVHVVNGLSYQSLDVHCQSKDDDLGY 60

Query: 61  HHLVKHGDTYKWSFKENFWGTTLFWCTLEKSDAYVSFEVFWPESWSNTWLRDRCGPEATC 120
           H LVK GD ++W+F+ENFWGTTLFWC LEK DAYV+FE FWPE+  N WLR RCG + TC
Sbjct: 61  HRLVKQGDEFQWNFEENFWGTTLFWCRLEKPDAYVAFESFWPET-KNVWLRHRCGNQGTC 120

Query: 121 IWVAKDGGIYLKNNPANRDEFIHKW 136
           IW AKD GIYL+N P N DEF+HKW
Sbjct: 121 IWTAKDDGIYLRNMPTNADEFVHKW 144

[Close]
BLAST of CsaV3_3G020600 vs. TrEMBL
Match: tr|A0A1S3CGQ1|A0A1S3CGQ1_CUCME (uncharacterized protein LOC103500539 OS=Cucumis melo OX=3656 GN=LOC103500539 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.4e-49
Identity = 89/143 (62.24%), Postives = 110/143 (76.92%), Query Frame = 0 

Query: 3   IRNVVVLWLATAALVGAQVPSWS----------VSIINGLSHLDLNVHCQSKNDDLGNHH 62
           +RNVV+LWLAT  +V  QV  W           V+++NGLS+  L+VHCQSK+DDLG HH
Sbjct: 1   MRNVVILWLATTVVVEGQVSRWKKPPPQPSRYFVNVVNGLSYHSLDVHCQSKDDDLGYHH 60

Query: 63  LVKHGDTYKWSFKENFWGTTLFWCTLEKSDAYVSFEVFWPESWSNTWLRDRCGPEATCIW 122
           LV HGD ++W+F+ENF+GTTLFWC LEKSDAYV+FE FWPES +N WLRDRCG + TC+W
Sbjct: 61  LVNHGDYFQWNFEENFFGTTLFWCRLEKSDAYVAFESFWPES-TNRWLRDRCGNQGTCVW 120

Query: 123 VAKDGGIYLKNNPANRDEFIHKW 136
           +AKD GIYL+N P N DE +HKW
Sbjct: 121 IAKDDGIYLRNIPVNVDELVHKW 142

[Close]
BLAST of CsaV3_3G020600 vs. TrEMBL
Match: tr|A0A1S3CG61|A0A1S3CG61_CUCME (uncharacterized protein LOC103500543 OS=Cucumis melo OX=3656 GN=LOC103500543 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.3e-44
Identity = 77/110 (70.00%), Postives = 89/110 (80.91%), Query Frame = 0 

Query: 26  VSIINGLSHLDLNVHCQSKNDDLGNHHLVKHGDTYKWSFKENFWGTTLFWCTLEKSDAYV 85
           V ++NGLS+  L+VHCQSKNDDLG HHLV  GD Y+W+F+EN WGTTLFWC LEK DAYV
Sbjct: 23  VHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWNFEENLWGTTLFWCRLEKPDAYV 82

Query: 86  SFEVFWPESWSNTWLRDRCGPEATCIWVAKDGGIYLKNNPANRDEFIHKW 136
           +FE FWPE+  N WLRDRCG + TCIW AKD GIYL+N P N DEF+HKW
Sbjct: 83  AFESFWPET-KNVWLRDRCGNQGTCIWTAKDDGIYLRNMPTNVDEFVHKW 131

The following BLAST results are available for this feature:
BLAST of CsaV3_3G020600 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139725.15.8e-7793.53PREDICTED: uncharacterized protein LOC101205959 [Cucumis sativus][more]
XP_008462118.11.7e-7692.81PREDICTED: pumilio homolog 15-like [Cucumis melo][more]
XP_008462113.11.4e-5773.53PREDICTED: uncharacterized protein LOC103500541 [Cucumis melo][more]
XP_004139723.11.2e-5073.55PREDICTED: uncharacterized protein LOC101205494 [Cucumis sativus][more]
XP_016903452.13.9e-4963.45PREDICTED: uncharacterized protein LOC103503421 [Cucumis melo][more]
BLAST of CsaV3_3G020600 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16295.14.7e-2035.56S-protein homologue 1[more]
AT1G28305.16.1e-1233.33Plant self-incompatibility protein S1 family[more]
AT5G04347.18.0e-1233.02Plant self-incompatibility protein S1 family[more]
AT3G26880.12.3e-1140.48Plant self-incompatibility protein S1 family[more]
AT5G04350.13.0e-1135.92Plant self-incompatibility protein S1 family[more]
BLAST of CsaV3_3G020600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|F4JLS0|SPH1_ARATH8.4e-1935.56S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1[more]
sp|Q9LW22|SPH21_ARATH4.2e-1040.48S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1[more]
sp|F4JLQ5|SPH2_ARATH3.3e-0728.57S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1[more]
sp|P0DN92|SPH24_ARATH4.3e-0732.74S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1[more]
sp|O23020|SPH5_ARATH1.3e-0632.89S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1[more]
BLAST of CsaV3_3G020600 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CGQ6|A0A1S3CGQ6_CUCME1.1e-7692.81pumilio homolog 15-like OS=Cucumis melo OX=3656 GN=LOC103500548 PE=4 SV=1[more]
tr|A0A1S3CG44|A0A1S3CG44_CUCME9.0e-5873.53uncharacterized protein LOC103500541 OS=Cucumis melo OX=3656 GN=LOC103500541 PE=... [more]
tr|A0A1S4E5F6|A0A1S4E5F6_CUCME2.6e-4963.45uncharacterized protein LOC103503421 OS=Cucumis melo OX=3656 GN=LOC103503421 PE=... [more]
tr|A0A1S3CGQ1|A0A1S3CGQ1_CUCME3.4e-4962.24uncharacterized protein LOC103500539 OS=Cucumis melo OX=3656 GN=LOC103500539 PE=... [more]
tr|A0A1S3CG61|A0A1S3CG61_CUCME4.3e-4470.00uncharacterized protein LOC103500543 OS=Cucumis melo OX=3656 GN=LOC103500543 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G020600.1CsaV3_3G020600.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF05938Self-incomp_S1coord: 26..135
e-value: 1.9E-26
score: 92.5
NoneNo IPR availablePANTHERPTHR31232:SF7S PROTEIN HOMOLOGUE 74-RELATEDcoord: 13..135
IPR010264Plant self-incompatibility S1PANTHERPTHR31232FAMILY NOT NAMEDcoord: 13..135

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G020600Cucsa.031450Cucumber (Gy14) v1cgycucB006
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G020600Silver-seed gourdcarcucB0518
CsaV3_3G020600Silver-seed gourdcarcucB0801
CsaV3_3G020600Cucumber (Gy14) v2cgybcucB117
CsaV3_3G020600Cucurbita maxima (Rimu)cmacucB0281
CsaV3_3G020600Cucurbita maxima (Rimu)cmacucB0547
CsaV3_3G020600Cucurbita moschata (Rifu)cmocucB0272
CsaV3_3G020600Cucurbita moschata (Rifu)cmocucB0532
CsaV3_3G020600Cucurbita pepo (Zucchini)cpecucB0686
CsaV3_3G020600Cucurbita pepo (Zucchini)cpecucB0749
CsaV3_3G020600Wild cucumber (PI 183967)cpicucB144
CsaV3_3G020600Bottle gourd (USVL1VR-Ls)cuclsiB231
CsaV3_3G020600Melon (DHL92) v3.5.1cucmeB249
CsaV3_3G020600Melon (DHL92) v3.6.1cucmedB235
CsaV3_3G020600Watermelon (Charleston Gray)cucwcgB234
CsaV3_3G020600Watermelon (Charleston Gray)cucwcgB241
CsaV3_3G020600Watermelon (97103) v1cucwmB256
CsaV3_3G020600Watermelon (97103) v2cucwmbB216
CsaV3_3G020600Watermelon (97103) v2cucwmbB220
CsaV3_3G020600Wax gourdcucwgoB274