CsaV3_3G020500 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G020500
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionTransposase
Locationchr3 : 16619425 .. 16621016 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGATTCACATTCTAGCAGTGAGGATGAAAGACAAATGATTCCTGAAGTAAGAACCAGATTATATGTGCCACGTGGCCCAACTATTGTGTCAGAGTTAGCACCAACAAGAAATGTTGGGCAACAGTTGTCCGTTCAATTTAATGAACACGGGAAACCTATAGGAGCAACTTCTAAGAAAATGCAAAGTTACATTGGTGTGTACATTCAGCAGCAGATTTCTGTCACATACAAATCTTGGAAACAAGTTCCGAATGAGTTGAAAGATAAAATCTATGATTGTATATCAGTATGGATTCTATATTTACGTTTTTTATACAATGTAGTTTGATTTCCCTAAGTCTAAATATGCTTTTGTTTTCTATTGTGTAAATGTCATTTGAGTTACATCATAATGCCAAACATTCTATCTTCATGTCTGCATCAAGAAAGTTTCAGACTTTCAAGACCTCATTAACTCGAAAGTATATACTACTGTTTAAGGATCGTCAACCATCACATCTACAGTTTCCTCTTAAAATTTATTCTCATATAATCAAGAAGATTGGGAATCCTTTGTGGACGCTAGACTAACTGAAGAATGGGAGGTAAAAAAAATTTAATTACATGTTAACTTTAATATTGTTTTGGTATGTAACTACAAACTACTGCTTTGTACAGGAGTACAGTTGTATTCAAAAGGAAAGAAGGTTAAAATGTTTATACAATCATCAATTTGCTCGTAAGGGATATGCGAATCTTGCCAACGAATTAATGAGTCTTTCTAATTAAATTAAATAATTTTTCTTAATATGTTTATACTAATTAAGTATATATCTTTGGTTGCATAATATAACACGTGATGTTTCCTATCGTTAACTCTTTGAAAAGAAGCCCGAAAAGGAAAGAACAATGGTTATTTTGATAATGCTACTGTCTCTCGGATTGTAAGTTTACTTACGATTTACTTATATAAAATATATAATCTTTTATTAACTTAGTTGGTGATGAAAATACTTGTATTGTTTTATAGGATGCATTAGTCGCAACACATAAATATGAGCACATATTGACTGAAGCATTGGGTTCCAAGGAGCACGGTGGACATGTCAGAGGTGTGGGTGGTTTTGTCTCTCAATCACAATATTTCAAAATAGTGAAAGGGAAAGAGAAAATGATAAGTTCTGAAGTTGAAATATGTCGTAAAGAAGATGACTCGAGAAGCAAAAGTCATAAGAAGAGTCATAGTCGCTCGAGATCGTCCATCGAAAGTGTTAACATAGATCTTATTGTCGATGAGGATTTGGGCAACACACCTAGCAACGAAGGAGTAAAGGTAATTAACTTTGTTGTCATTTTTAAAATTTTAATGATATAGATCAATTGTTCTTAACGATACTTTTAATACTTGTAAAGGGAACACCATGCAAATTAGCTGTAGGATCAATTAATAATATCGTTGCAATAGCCACCATATTTGACGATAACAGTGACGGTCCAAATGTTAAAGTTTTGGTGGACTTGCTTACTAAAGGAGATTTTAGTATACCTGTTCCGATGAAGGGCAAGATAGAGACTTTCAATCAAACGTTGGGTAACATTATTGAATGA

mRNA sequence

ATGGAGGATTCACATTCTAGCAGTGAGGATGAAAGACAAATGATTCCTGAAGTAAGAACCAGATTATATGTGCCACGTGGCCCAACTATTGTGTCAGAGTTAGCACCAACAAGAAATGTTGGGCAACAGTTGTCCGTTCAATTTAATGAACACGGGAAACCTATAGGAGCAACTTCTAAGAAAATGCAAAGTTACATTGGTGTGTACATTCAGCAGCAGATTTCTGTCACATACAAATCTTGGAAACAAGTTCCGAATGAGTTGAAAGATAAAATCTATGATTGTATATCAGATGCATTAGTCGCAACACATAAATATGAGCACATATTGACTGAAGCATTGGGTTCCAAGGAGCACGGTGGACATGTCAGAGGTGTGGGTGGTTTTGTCTCTCAATCACAATATTTCAAAATAGTGAAAGGGAAAGAGAAAATGATAAGTTCTGAAGTTGAAATATGTCGTAAAGAAGATGACTCGAGAAGCAAAAGTCATAAGAAGAGTCATAGTCGCTCGAGATCGTCCATCGAAAGTGTTAACATAGATCTTATTGTCGATGAGGATTTGGGCAACACACCTAGCAACGAAGGAGTAAAGGGAACACCATGCAAATTAGCTGTAGGATCAATTAATAATATCGTTGCAATAGCCACCATATTTGACGATAACAGTGACGGTCCAAATGTTAAAGTTTTGGTGGACTTGCTTACTAAAGGAGATTTTAGTATACCTGTTCCGATGAAGGGCAAGATAGAGACTTTCAATCAAACGTTGGGTAACATTATTGAATGA

Coding sequence (CDS)

ATGGAGGATTCACATTCTAGCAGTGAGGATGAAAGACAAATGATTCCTGAAGTAAGAACCAGATTATATGTGCCACGTGGCCCAACTATTGTGTCAGAGTTAGCACCAACAAGAAATGTTGGGCAACAGTTGTCCGTTCAATTTAATGAACACGGGAAACCTATAGGAGCAACTTCTAAGAAAATGCAAAGTTACATTGGTGTGTACATTCAGCAGCAGATTTCTGTCACATACAAATCTTGGAAACAAGTTCCGAATGAGTTGAAAGATAAAATCTATGATTGTATATCAGATGCATTAGTCGCAACACATAAATATGAGCACATATTGACTGAAGCATTGGGTTCCAAGGAGCACGGTGGACATGTCAGAGGTGTGGGTGGTTTTGTCTCTCAATCACAATATTTCAAAATAGTGAAAGGGAAAGAGAAAATGATAAGTTCTGAAGTTGAAATATGTCGTAAAGAAGATGACTCGAGAAGCAAAAGTCATAAGAAGAGTCATAGTCGCTCGAGATCGTCCATCGAAAGTGTTAACATAGATCTTATTGTCGATGAGGATTTGGGCAACACACCTAGCAACGAAGGAGTAAAGGGAACACCATGCAAATTAGCTGTAGGATCAATTAATAATATCGTTGCAATAGCCACCATATTTGACGATAACAGTGACGGTCCAAATGTTAAAGTTTTGGTGGACTTGCTTACTAAAGGAGATTTTAGTATACCTGTTCCGATGAAGGGCAAGATAGAGACTTTCAATCAAACGTTGGGTAACATTATTGAATGA

Protein sequence

MEDSHSSSEDERQMIPEVRTRLYVPRGPTIVSELAPTRNVGQQLSVQFNEHGKPIGATSKKMQSYIGVYIQQQISVTYKSWKQVPNELKDKIYDCISDALVATHKYEHILTEALGSKEHGGHVRGVGGFVSQSQYFKIVKGKEKMISSEVEICRKEDDSRSKSHKKSHSRSRSSIESVNIDLIVDEDLGNTPSNEGVKGTPCKLAVGSINNIVAIATIFDDNSDGPNVKVLVDLLTKGDFSIPVPMKGKIETFNQTLGNIIE
Homology
[Close]
BLAST of CsaV3_3G020500 vs. NCBI nr
Match: KGN57737.1 (hypothetical protein Csa_3G270810 [Cucumis sativus])

HSP 1 Score: 493.0 bits (1268), Expect = 6.1e-136
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0 

Query: 1   MEDSHSSSEDERQMIPEVRTRLYVPRGPTIVSELAPTRNVGQQLSVQFNEHGKPIGATSK 60
           MEDSHSSSEDERQMIPEVRTRLYVPRGPTIVSELAPTRNVGQQLSVQFNEHGKPIGATSK
Sbjct: 1   MEDSHSSSEDERQMIPEVRTRLYVPRGPTIVSELAPTRNVGQQLSVQFNEHGKPIGATSK 60

Query: 61  KMQSYIGVYIQQQISVTYKSWKQVPNELKDKIYDCISDALVATHKYEHILTEALGSKEHG 120
           KMQSYIGVYIQQQISVTYKSWKQVPNELKDKIYDCISDALVATHKYEHILTEALGSKEHG
Sbjct: 61  KMQSYIGVYIQQQISVTYKSWKQVPNELKDKIYDCISDALVATHKYEHILTEALGSKEHG 120

Query: 121 GHVRGVGGFVSQSQYFKIVKGKEKMISSEVEICRKEDDSRSKXXXXXXXXXXXXIESVNI 180
           GHVRGVGGFVSQSQYFKIVKGKEKMISSEVEICRKEDDSRSKXXXXXXXXXXXXIESVNI
Sbjct: 121 GHVRGVGGFVSQSQYFKIVKGKEKMISSEVEICRKEDDSRSKXXXXXXXXXXXXIESVNI 180

Query: 181 DLIVDEDLGNTPSNEGVKGTPCKLAVGSINNIVAIATIFDDNSDGPNVKVLVDLLTKGDF 240
           DLIVDEDLGNTPSNEGVKGTPCKLAVGSINNIVAIATIFDDNSDGPNVKVLVDLLTKGDF
Sbjct: 181 DLIVDEDLGNTPSNEGVKGTPCKLAVGSINNIVAIATIFDDNSDGPNVKVLVDLLTKGDF 240

Query: 241 SIPVPMKGKIETFNQTLGNIIE 263
           SIPVPMKGKIETFNQTLGNIIE
Sbjct: 241 SIPVPMKGKIETFNQTLGNIIE 262

[Close]
BLAST of CsaV3_3G020500 vs. NCBI nr
Match: KGN44061.1 (hypothetical protein Csa_7G157500 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 1.0e-42
Identity = 112/210 (53.33%), Postives = 133/210 (63.33%), Query Frame = 0 

Query: 1   MEDSHSSSEDERQMIPEVRTRLYVPRGPTIVSELAPTRNVGQQLSVQFNEHGKPIGATSK 60
           ME+SH SSEDERQMI EVR R +VPRGPT +S+LA          +Q     K +     
Sbjct: 1   MENSHISSEDERQMILEVRNRSFVPRGPTTMSKLA-----SDYSRIQRERRSKCVYNHHV 60

Query: 61  KMQSYIGVY--IQQQISVTYKS--WKQV------PNELKDKIYDCIS--DALVATHKYEH 120
             + Y+ +   I     V+Y+S  WK+        +   D   DC+S  DALVATHK E 
Sbjct: 61  ARKGYVNLVNEINMTCDVSYRSTLWKEAWKGNNNNDYFDDATRDCVSRIDALVATHKDED 120

Query: 121 ILTEALGSKEHGGHVRGVGGFVSQSQYFKIVKGKEKMISSEVEICRKEDDSRSKXXXXXX 180
           ILT+ LGSKE+GG VRGVGGFVSQSQYFKIVKGKEKMIS EVEIC KEDDSRSK      
Sbjct: 121 ILTKVLGSKEYGGRVRGVGGFVSQSQYFKIVKGKEKMISPEVEICHKEDDSRSKSYKKSL 180

Query: 181 XXXXXXIESVNIDLIVDEDLGNTPSNEGVK 199
                 I+ V+IDL  +E+LGNTPSNEGV+
Sbjct: 181 NHSRSSIKIVSIDLNANEELGNTPSNEGVE 205

[Close]
BLAST of CsaV3_3G020500 vs. NCBI nr
Match: XP_022136077.1 (uncharacterized protein LOC111007859 isoform X2 [Momordica charantia])

HSP 1 Score: 163.7 bits (413), Expect = 8.5e-37
Identity = 118/408 (28.92%), Postives = 169/408 (41.42%), Query Frame = 0 

Query: 1   MEDSHSSSEDERQMIPEVRTRLYVPRGPTIVSELAPTRNVGQQLSVQFNEHGKPIGATSK 60
           M DS SSS+DER ++     +    RGPT + EL   RN+G++ ++++N+ G+PIG  +K
Sbjct: 1   MSDSSSSSQDERSVVIHTEVKKVARRGPTTMHELTCIRNLGKRKTIEYNDQGQPIGENAK 60

Query: 61  KMQSYIGVYIQQQISVTYKSWKQVPNELKDKIYDCIS----------------------- 120
           KMQS+IGV ++Q+I VTY  WK+VP ELKDKI++C+                        
Sbjct: 61  KMQSFIGVCVRQKIPVTYNHWKEVPQELKDKIFNCVESFVLDWRSKHHILQSASKKFRTF 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 KSTLTRTYILPFKDEPICLQNPPEKYPHIDQEQWNSFVNARLSEEWETLSRAHKEIRAKC 180

Query: 181 ------------------------------------------------------DALVAT 240
                                                                 D L A 
Sbjct: 181 LYNHHISRKGYANLAQELDLSSDPSNRAILWKEARKGKNNEYFDDATRECAARIDELAAI 240

Query: 241 HKYEHILTEALGSKEHGGHVRGVGGFVSQSQYFKIVKGKEKMISSEVEICRKEDDSRSKX 262
           HK E ILTEALG+ EH G VRGVG FVS S YF +VKGK K    +      E  + SK 
Sbjct: 241 HKGEDILTEALGTSEHSGRVRGVGEFVSPSLYFNVVKGKSKTQELQPNKSTTEGSNPSK- 300

[Close]
BLAST of CsaV3_3G020500 vs. NCBI nr
Match: XP_022136079.1 (uncharacterized protein LOC111007859 isoform X3 [Momordica charantia])

HSP 1 Score: 163.3 bits (412), Expect = 1.1e-36
Identity = 118/409 (28.85%), Postives = 169/409 (41.32%), Query Frame = 0 

Query: 1   MEDSHSSSEDERQMIPEVRTRLYVPRGPTIVSELAPTRNVGQQLSVQFNEHGKPIGATSK 60
           M DS SSS+DER ++     +    RGPT + EL   RN+G++ ++++N+ G+PIG  +K
Sbjct: 1   MSDSSSSSQDERSVVIHTEVKKVARRGPTTMHELTCIRNLGKRKTIEYNDQGQPIGENAK 60

Query: 61  KMQSYIGVYIQQQISVTYKSWKQVPNELKDKIYDCIS----------------------- 120
           KMQS+IGV ++Q+I VTY  WK+VP ELKDKI++C+                        
Sbjct: 61  KMQSFIGVCVRQKIPVTYNHWKEVPQELKDKIFNCVEKSFVLDWRSKHHILQSASKKFRT 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 FKSTLTRTYILPFKDEPICLQNPPEKYPHIDQEQWNSFVNARLSEEWETLSRAHKEIRAK 180

Query: 181 -------------------------------------------------------DALVA 240
                                                                  D L A
Sbjct: 181 CLYNHHISRKGYANLAQELDLSSDPSNRAILWKEARKGKNNEYFDDATRECAARIDELAA 240

Query: 241 THKYEHILTEALGSKEHGGHVRGVGGFVSQSQYFKIVKGKEKMISSEVEICRKEDDSRSK 262
            HK E ILTEALG+ EH G VRGVG FVS S YF +VKGK K    +      E  + SK
Sbjct: 241 IHKGEDILTEALGTSEHSGRVRGVGEFVSPSLYFNVVKGKSKTQELQPNKSTTEGSNPSK 300

[Close]
BLAST of CsaV3_3G020500 vs. NCBI nr
Match: XP_022136080.1 (uncharacterized protein LOC111007859 isoform X4 [Momordica charantia])

HSP 1 Score: 163.3 bits (412), Expect = 1.1e-36
Identity = 118/409 (28.85%), Postives = 169/409 (41.32%), Query Frame = 0 

Query: 1   MEDSHSSSEDERQMIPEVRTRLYVPRGPTIVSELAPTRNVGQQLSVQFNEHGKPIGATSK 60
           M DS SSS+DER ++     +    RGPT + EL   RN+G++ ++++N+ G+PIG  +K
Sbjct: 1   MSDSSSSSQDERSVVIHTEVKKVARRGPTTMHELTCIRNLGKRKTIEYNDQGQPIGENAK 60

Query: 61  KMQSYIGVYIQQQISVTYKSWKQVPNELKDKIYDCIS----------------------- 120
           KMQS+IGV ++Q+I VTY  WK+VP ELKDKI++C+                        
Sbjct: 61  KMQSFIGVCVRQKIPVTYNHWKEVPQELKDKIFNCVEKSFVLDWRSKHHILQSASKKFRT 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 FKSTLTRTYILPFKDEPICLQNPPEKYPHIDQEQWNSFVNARLSEEWETLSRAHKEIRAK 180

Query: 181 -------------------------------------------------------DALVA 240
                                                                  D L A
Sbjct: 181 CLYNHHISRKGYANLAQELDLSSDPSNRAILWKEARKGKNNEYFDDATRECAARIDELAA 240

Query: 241 THKYEHILTEALGSKEHGGHVRGVGGFVSQSQYFKIVKGKEKMISSEVEICRKEDDSRSK 262
            HK E ILTEALG+ EH G VRGVG FVS S YF +VKGK K    +      E  + SK
Sbjct: 241 IHKGEDILTEALGTSEHSGRVRGVGEFVSPSLYFNVVKGKSKTQELQPNKSTTEGSNPSK 300

[Close]
BLAST of CsaV3_3G020500 vs. TrEMBL
Match: tr|A0A0A0LAN8|A0A0A0LAN8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G270810 PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 4.0e-136
Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0 

Query: 1   MEDSHSSSEDERQMIPEVRTRLYVPRGPTIVSELAPTRNVGQQLSVQFNEHGKPIGATSK 60
           MEDSHSSSEDERQMIPEVRTRLYVPRGPTIVSELAPTRNVGQQLSVQFNEHGKPIGATSK
Sbjct: 1   MEDSHSSSEDERQMIPEVRTRLYVPRGPTIVSELAPTRNVGQQLSVQFNEHGKPIGATSK 60

Query: 61  KMQSYIGVYIQQQISVTYKSWKQVPNELKDKIYDCISDALVATHKYEHILTEALGSKEHG 120
           KMQSYIGVYIQQQISVTYKSWKQVPNELKDKIYDCISDALVATHKYEHILTEALGSKEHG
Sbjct: 61  KMQSYIGVYIQQQISVTYKSWKQVPNELKDKIYDCISDALVATHKYEHILTEALGSKEHG 120

Query: 121 GHVRGVGGFVSQSQYFKIVKGKEKMISSEVEICRKEDDSRSKXXXXXXXXXXXXIESVNI 180
           GHVRGVGGFVSQSQYFKIVKGKEKMISSEVEICRKEDDSRSKXXXXXXXXXXXXIESVNI
Sbjct: 121 GHVRGVGGFVSQSQYFKIVKGKEKMISSEVEICRKEDDSRSKXXXXXXXXXXXXIESVNI 180

Query: 181 DLIVDEDLGNTPSNEGVKGTPCKLAVGSINNIVAIATIFDDNSDGPNVKVLVDLLTKGDF 240
           DLIVDEDLGNTPSNEGVKGTPCKLAVGSINNIVAIATIFDDNSDGPNVKVLVDLLTKGDF
Sbjct: 181 DLIVDEDLGNTPSNEGVKGTPCKLAVGSINNIVAIATIFDDNSDGPNVKVLVDLLTKGDF 240

Query: 241 SIPVPMKGKIETFNQTLGNIIE 263
           SIPVPMKGKIETFNQTLGNIIE
Sbjct: 241 SIPVPMKGKIETFNQTLGNIIE 262

[Close]
BLAST of CsaV3_3G020500 vs. TrEMBL
Match: tr|A0A0A0K8F2|A0A0A0K8F2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G157500 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.9e-43
Identity = 112/210 (53.33%), Postives = 133/210 (63.33%), Query Frame = 0 

Query: 1   MEDSHSSSEDERQMIPEVRTRLYVPRGPTIVSELAPTRNVGQQLSVQFNEHGKPIGATSK 60
           ME+SH SSEDERQMI EVR R +VPRGPT +S+LA          +Q     K +     
Sbjct: 1   MENSHISSEDERQMILEVRNRSFVPRGPTTMSKLA-----SDYSRIQRERRSKCVYNHHV 60

Query: 61  KMQSYIGVY--IQQQISVTYKS--WKQV------PNELKDKIYDCIS--DALVATHKYEH 120
             + Y+ +   I     V+Y+S  WK+        +   D   DC+S  DALVATHK E 
Sbjct: 61  ARKGYVNLVNEINMTCDVSYRSTLWKEAWKGNNNNDYFDDATRDCVSRIDALVATHKDED 120

Query: 121 ILTEALGSKEHGGHVRGVGGFVSQSQYFKIVKGKEKMISSEVEICRKEDDSRSKXXXXXX 180
           ILT+ LGSKE+GG VRGVGGFVSQSQYFKIVKGKEKMIS EVEIC KEDDSRSK      
Sbjct: 121 ILTKVLGSKEYGGRVRGVGGFVSQSQYFKIVKGKEKMISPEVEICHKEDDSRSKSYKKSL 180

Query: 181 XXXXXXIESVNIDLIVDEDLGNTPSNEGVK 199
                 I+ V+IDL  +E+LGNTPSNEGV+
Sbjct: 181 NHSRSSIKIVSIDLNANEELGNTPSNEGVE 205

[Close]
BLAST of CsaV3_3G020500 vs. TrEMBL
Match: tr|A0A1S4E5B4|A0A1S4E5B4_CUCME (uncharacterized protein LOC107992176 OS=Cucumis melo OX=3656 GN=LOC107992176 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.1e-32
Identity = 71/97 (73.20%), Postives = 84/97 (86.60%), Query Frame = 0 

Query: 1  MEDSHSSSEDERQMIPEVRTRLYVPRGPTIVSELAPTRNVGQQLSVQFNEHGKPIGATSK 60
          MED   SSEDER+M+PEVR + +VPRGPT +SELA  RN GQ+L +QFNEHG+P+GATSK
Sbjct: 1  MED---SSEDEREMLPEVRKKSFVPRGPTTMSELASVRNSGQKLLIQFNEHGQPVGATSK 60

Query: 61 KMQSYIGVYIQQQISVTYKSWKQVPNELKDKIYDCIS 98
          KMQSYIGV ++QQI +TY SWK+VPNELKDKIYDCIS
Sbjct: 61 KMQSYIGVCVRQQIPITYNSWKEVPNELKDKIYDCIS 94

[Close]
BLAST of CsaV3_3G020500 vs. TrEMBL
Match: tr|A0A1S4DYB9|A0A1S4DYB9_CUCME (uncharacterized protein LOC103492405 OS=Cucumis melo OX=3656 GN=LOC103492405 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25
Identity = 70/112 (62.50%), Postives = 80/112 (71.43%), Query Frame = 0 

Query: 90  DKIYDCIS--DALVATHKYEHILTEALGSKEHGGHVRGVGGFVSQSQYFKIVKGKEKMIS 149
           D   DC S  D LVATHK E ILT+ALGSKEHG +V+ VGGFVSQSQYF  +KGKEKMI+
Sbjct: 40  DATRDCASRIDELVATHKNEDILTDALGSKEHGRYVKVVGGFVSQSQYFNTIKGKEKMIT 99

Query: 150 SEVEICRK-EDDSRSKXXXXXXXXXXXXIESVNIDLIVDEDLGNTPSNEGVK 199
           SEVEIC K EDD+R K            I S+NIDL  DEDL NTP+N+GV+
Sbjct: 100 SEVEICHKEEDDTRCKSYKKRSNHSRSSIGSINIDLDADEDLVNTPNNKGVE 151

[Close]
BLAST of CsaV3_3G020500 vs. TrEMBL
Match: tr|A0A1S3BRX5|A0A1S3BRX5_CUCME (uncharacterized protein LOC103493028 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493028 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.4e-24
Identity = 115/444 (25.90%), Postives = 166/444 (37.39%), Query Frame = 0 

Query: 1   MEDSHSSSEDERQMIPEVRTRLYVPRGPTIVSELAPTRNVGQQLSVQFNEHGKPIGATSK 60
           M+DS SSS+DE  ++     +    RGPTI+ EL   RN G++ ++++N+ G+P+G  +K
Sbjct: 1   MDDSGSSSQDEGNVLIRYEVKRTARRGPTIMPELLHIRNSGERKTIEYNDRGQPVGENAK 60

Query: 61  KMQSYIGVYIQQQISVTYKSWKQVPNELKDKIYDCIS----------------------- 120
           KMQS+IGV ++QQI VTY SWK+VP ELKD I+DCI                        
Sbjct: 61  KMQSFIGVCVRQQIPVTYNSWKEVPQELKDTIFDCIQMSFVVDLSSKHYILQSASKKFRS 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 FKSTLTQMYILPYKDEPSRLQYPPEKYSHIDKKQWESFVKARLSEEWEVFSCAQRERRAK 180

Query: 181 -------------------------------------------------------DALVA 240
                                                                  D L A
Sbjct: 181 CIYNHHISRKGYANLAQELELSSDPCNRATLWKEARKRKNNGCFDDATRECVKRIDELAA 240

Query: 241 THKYEHILTEALGSKEHGGHVRGVGGFVSQSQYFKIVKGKEKMISSEVE----------- 262
             K + ILTEALG+ EH G +RGVG FVS + +  + +G  K+     +           
Sbjct: 241 IRKGQDILTEALGTPEHRGRIRGVGEFVSPALHVNVARGNLKLSQQSQDKDEXXXXXXXX 300

The following BLAST results are available for this feature:
BLAST of CsaV3_3G020500 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57737.16.1e-136100.00hypothetical protein Csa_3G270810 [Cucumis sativus][more]
KGN44061.11.0e-4253.33hypothetical protein Csa_7G157500 [Cucumis sativus][more]
XP_022136077.18.5e-3728.92uncharacterized protein LOC111007859 isoform X2 [Momordica charantia][more]
XP_022136079.11.1e-3628.85uncharacterized protein LOC111007859 isoform X3 [Momordica charantia][more]
XP_022136080.11.1e-3628.85uncharacterized protein LOC111007859 isoform X4 [Momordica charantia][more]
BLAST of CsaV3_3G020500 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G020500 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G020500 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LAN8|A0A0A0LAN8_CUCSA4.0e-136100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G270810 PE=4 SV=1[more]
tr|A0A0A0K8F2|A0A0A0K8F2_CUCSA6.9e-4353.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G157500 PE=4 SV=1[more]
tr|A0A1S4E5B4|A0A1S4E5B4_CUCME1.1e-3273.20uncharacterized protein LOC107992176 OS=Cucumis melo OX=3656 GN=LOC107992176 PE=... [more]
tr|A0A1S4DYB9|A0A1S4DYB9_CUCME1.3e-2562.50uncharacterized protein LOC103492405 OS=Cucumis melo OX=3656 GN=LOC103492405 PE=... [more]
tr|A0A1S3BRX5|A0A1S3BRX5_CUCME1.4e-2425.90uncharacterized protein LOC103493028 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G020500.1CsaV3_3G020500.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..173
NoneNo IPR availablePANTHERPTHR33018:SF11SUBFAMILY NOT NAMEDcoord: 105..261
NoneNo IPR availablePANTHERPTHR33018FAMILY NOT NAMEDcoord: 105..261

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G020500CSPI03G20530Wild cucumber (PI 183967)cpicucB144
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G020500Silver-seed gourdcarcucB0518
CsaV3_3G020500Silver-seed gourdcarcucB0801
CsaV3_3G020500Cucumber (Gy14) v2cgybcucB117
CsaV3_3G020500Cucumber (Gy14) v1cgycucB006
CsaV3_3G020500Cucurbita maxima (Rimu)cmacucB0281
CsaV3_3G020500Cucurbita maxima (Rimu)cmacucB0547
CsaV3_3G020500Cucurbita moschata (Rifu)cmocucB0272
CsaV3_3G020500Cucurbita moschata (Rifu)cmocucB0532
CsaV3_3G020500Cucurbita pepo (Zucchini)cpecucB0686
CsaV3_3G020500Cucurbita pepo (Zucchini)cpecucB0749
CsaV3_3G020500Bottle gourd (USVL1VR-Ls)cuclsiB231
CsaV3_3G020500Melon (DHL92) v3.5.1cucmeB249
CsaV3_3G020500Melon (DHL92) v3.6.1cucmedB235
CsaV3_3G020500Watermelon (Charleston Gray)cucwcgB241
CsaV3_3G020500Watermelon (97103) v1cucwmB256
CsaV3_3G020500Watermelon (97103) v2cucwmbB220
CsaV3_3G020500Wax gourdcucwgoB274