CsaV3_3G020470 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G020470
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Golgin family A protein
Location	chr3 : 16600253 .. 16603064 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGGTGTTCCAAATTATATGACTACGAAATAACAACAAACATTTTTCAAAAGGATAATTATAATTGAACTATCTACCCCTAATGTTTTCTTTATTTGGGAAACTAACTCATTAGATTCACCTCCAACATTTCAACCTATTGCCCTACCGACGGAGAGGATCAATAGCCAAAAATGGCCGGTTTGCTCTCATGGGCAGCGGACGTCGTCGCCGGCGGCGGCGGCGGCGCCAACCACAACGACGAACGTACCACTTCCATTCCCCTAATTTTTACTCCCGACCAGCAGAATTACGTTCGAGAATTGAATCAGAAAGCAGCTTCTCTCAGCCGCTCGGTCCGCGATCTGCGCCTTCGATTGCCTCCTCCCGACATCTCCCAACGCCTTCCCCATCTTCATGCTCACTCTCTTGCTTCAACGGCCGATCTTACTCTTCAATTGAACGCCCACTCTTCCACACGAGAACAGGTTAGCCTTCTACATTCTAAATATTACTTTGCCAGTATACGTTTAACGATCTCGGACTTTCATTCGTGTTTGTTACTGTTCTCCACAACTCTAACTGCGATTCGTGTTTGTCAATTGTTCACCATAGATGCTGCATTGTTGAATATTTGTTATTGTTCTGTTTCGAGATCATTACAAAATAGTTTAATTTCGGTGGAATTTATTCTTAGCTCGATTTTGACAAAATAGTTTAACTTCTTCAAGGGGAGATGTATGCTGATTTTTGGTGAGAGATTCGGAGGATTGAGAAAAGAGTTATGCCACCGTTGCTATTTATAGAGTGAAATTAGATTAGATTAACCAATACAATAAGGTTTGATGAACTTTTGCCGATGGTATGAGGTTTGGCAAGTTTGTGCTTCTATAGGAGTTAAAACTGGTATTTAGAGATCGCTGGCAGATTTTGGAAACAAATATTAAACTTTCTGTACCATGTATGTGGAATAATTCTATTGCTTTACACTGATTGGTTGGAGAAACGATTTAGTTATACCCCAGAAATGTTCTTGGTTGCCTTGTGTTTTCCTTGGTACGTTTATTTTGTCGAAAAACAGTGCGTTTAATCATATTATTATTCTTACTTGAATGTTCATAATGTTTGTCAAGAACCTGTAATATTACTTCTGATAGTTGGCATCGTTCTCATTTCCAGGTCCAATTGAGAGAGATATCACTACAGGAAGAAAATGTTGCATATGGAAAGGCCATTTCAAATTGTGAAAATAAAATACAGGAAAAGAGACAGGAAGCAGATTTGCTTCTGAGGAAGTTAGAGGTAATGGTTTAAGATCCCAACTTCGTGTCAGTTGCTATTTCTAAGGCTCTATTTGATGAAAATTTCCTTTTTTGTTTTTGGTTTTTGATATTTGTGCCGGTTGTTTCTCTCCTAATTTTGATTTTTCAAGTAAAAGAATCACTTCAATTCCTAGTCAAATTCTAAAAACATAAACTATAGTTCTCGAAACTTAGCTTCGTTTTAGTGAAAAACTTAGGTGTGAAGTAGCCTTTATAAGCTTAATTTTCAAAACCTAAAATTAAGTACCACATTGGTGTTCTGTTTGACCATAAATATTCATTTCTCCTTTCAAATGGATATTACGTTAATCCAGCATTATGGAAGAGTTGGAAATGCATTTACATGGCGTTATTAACATGATATAAAAGAATTCATCAAATTGTTGGATAGTTCAAGCTCCTACCAATATATATTTTTTAAAATTGTTCTTTGTTAATTTATACTACAGGAGTTAGAAGAAACCACCAAGAATCTGGAAGTTGAGCTAGAAAACGCACAAGCTGCTCTGGAAAATGATGAATCAATCAACTTCGGAAAATTGACATCCAAACCTTCGAAAGTTGAAGCAGAACAAGATATGGAATTATCAAAGTCTGCGTTGCTAGACAAACTAGAGATCAAGAAACAAGAACTGGTTTGCTGCCTTATTTTGATTTTAATAGTTTTTTTCCTTTTCCTTTTCCTTTTCCTTTTATCTCTCTTCTCCGCATTTCCTAATAGTTATTGCTGACAAAGTTTGGTTATTCTTCTAGAGTTCAATGGAAGACACAGTTAAAGAATTAGAAAAAAACTGGGCAGAAATTCAGGATAAAGCTCTAAAACAGCCTTCACCAGGTATTTTCAATTGGTCACAATTGTTCTCCTTATTCCTTTTTCAAAGACTTGATATCAAAGACTTTTGCAGTTCAGAGAGAGAAAATGTTAGACAAACAACTCCATAGCCTCATGGAGCAACTAGCTGTAAAACAGGTGAATCTTACATTTCTGAAGTTGAATGCTTAAACTTTCGATTCAAATAATAAAATCAATTCCAAGTATTTCCCTGTTTGTAGGCACAAGCCGAAGGTTTGGCAAGTGACATTCATCTGAAGGAGATGGAGCTGGAAAAACTAAAAACATCATCAAGGAGGCTGCAAAGTAGCAGCTCCGAGGCTAATATTGCTCGTAATCGTTTTGGAAAAAGCATGTCCGACAAGAATTTTCAAGACCTCTTAGCTGACTCGCACCACAGACTACCTTATCGCAGTGGTGGTCGGAGTGAAAATCAACAGAGACTGATGCTATTCCGTTCTGCTTTCGTGGTCTACATTTTAGCTCTACATATATTGGTTTTCATCAAAATTTCATTCTGAACAACCACATATATTCATCAGTATTTTATTTGTATGTAATAACTAATTAGATATATAGAAACTCGGATACCAAGTAGAACACCAATAAAGTGATCAAATATATGTAAACAAATCATCCTTTTGAATTCTCTCCAAGAACTGAATAGATGGCAAACTTG

mRNA sequence

ATGGCCGGTTTGCTCTCATGGGCAGCGGACGTCGTCGCCGGCGGCGGCGGCGGCGCCAACCACAACGACGAACGTACCACTTCCATTCCCCTAATTTTTACTCCCGACCAGCAGAATTACGTTCGAGAATTGAATCAGAAAGCAGCTTCTCTCAGCCGCTCGGTCCGCGATCTGCGCCTTCGATTGCCTCCTCCCGACATCTCCCAACGCCTTCCCCATCTTCATGCTCACTCTCTTGCTTCAACGGCCGATCTTACTCTTCAATTGAACGCCCACTCTTCCACACGAGAACAGGTCCAATTGAGAGAGATATCACTACAGGAAGAAAATGTTGCATATGGAAAGGCCATTTCAAATTGTGAAAATAAAATACAGGAAAAGAGACAGGAAGCAGATTTGCTTCTGAGGAAGTTAGAGGAGTTAGAAGAAACCACCAAGAATCTGGAAGTTGAGCTAGAAAACGCACAAGCTGCTCTGGAAAATGATGAATCAATCAACTTCGGAAAATTGACATCCAAACCTTCGAAAGTTGAAGCAGAACAAGATATGGAATTATCAAAGTCTGCGTTGCTAGACAAACTAGAGATCAAGAAACAAGAACTGAGTTCAATGGAAGACACAGTTAAAGAATTAGAAAAAAACTGGGCAGAAATTCAGGATAAAGCTCTAAAACAGCCTTCACCAGTTCAGAGAGAGAAAATGTTAGACAAACAACTCCATAGCCTCATGGAGCAACTAGCTGTAAAACAGGCACAAGCCGAAGGTTTGGCAAGTGACATTCATCTGAAGGAGATGGAGCTGGAAAAACTAAAAACATCATCAAGGAGGCTGCAAAGTAGCAGCTCCGAGGCTAATATTGCTCGTAATCGTTTTGGAAAAAGCATGTCCGACAAGAATTTTCAAGACCTCTTAGCTGACTCGCACCACAGACTACCTTATCGCAGTGGTGGTCGGAGTGAAAATCAACAGAGACTGATGCTATTCCGTTCTGCTTTCGTGGTCTACATTTTAGCTCTACATATATTGGTTTTCATCAAAATTTCATTCTGA

Coding sequence (CDS)

ATGGCCGGTTTGCTCTCATGGGCAGCGGACGTCGTCGCCGGCGGCGGCGGCGGCGCCAACCACAACGACGAACGTACCACTTCCATTCCCCTAATTTTTACTCCCGACCAGCAGAATTACGTTCGAGAATTGAATCAGAAAGCAGCTTCTCTCAGCCGCTCGGTCCGCGATCTGCGCCTTCGATTGCCTCCTCCCGACATCTCCCAACGCCTTCCCCATCTTCATGCTCACTCTCTTGCTTCAACGGCCGATCTTACTCTTCAATTGAACGCCCACTCTTCCACACGAGAACAGGTCCAATTGAGAGAGATATCACTACAGGAAGAAAATGTTGCATATGGAAAGGCCATTTCAAATTGTGAAAATAAAATACAGGAAAAGAGACAGGAAGCAGATTTGCTTCTGAGGAAGTTAGAGGAGTTAGAAGAAACCACCAAGAATCTGGAAGTTGAGCTAGAAAACGCACAAGCTGCTCTGGAAAATGATGAATCAATCAACTTCGGAAAATTGACATCCAAACCTTCGAAAGTTGAAGCAGAACAAGATATGGAATTATCAAAGTCTGCGTTGCTAGACAAACTAGAGATCAAGAAACAAGAACTGAGTTCAATGGAAGACACAGTTAAAGAATTAGAAAAAAACTGGGCAGAAATTCAGGATAAAGCTCTAAAACAGCCTTCACCAGTTCAGAGAGAGAAAATGTTAGACAAACAACTCCATAGCCTCATGGAGCAACTAGCTGTAAAACAGGCACAAGCCGAAGGTTTGGCAAGTGACATTCATCTGAAGGAGATGGAGCTGGAAAAACTAAAAACATCATCAAGGAGGCTGCAAAGTAGCAGCTCCGAGGCTAATATTGCTCGTAATCGTTTTGGAAAAAGCATGTCCGACAAGAATTTTCAAGACCTCTTAGCTGACTCGCACCACAGACTACCTTATCGCAGTGGTGGTCGGAGTGAAAATCAACAGAGACTGATGCTATTCCGTTCTGCTTTCGTGGTCTACATTTTAGCTCTACATATATTGGTTTTCATCAAAATTTCATTCTGA

Protein sequence

MAGLLSWAADVVAGGGGGANHNDERTTSIPLIFTPDQQNYVRELNQKAASLSRSVRDLRLRLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNCENKIQEKRQEADLLLRKLEELEETTKNLEVELENAQAALENDESINFGKLTSKPSKVEAEQDMELSKSALLDKLEIKKQELSSMEDTVKELEKNWAEIQDKALKQPSPVQREKMLDKQLHSLMEQLAVKQAQAEGLASDIHLKEMELEKLKTSSRRLQSSSSEANIARNRFGKSMSDKNFQDLLADSHHRLPYRSGGRSENQQRLMLFRSAFVVYILALHILVFIKISF

Homology

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BLAST of CsaV3_3G020470 vs. NCBI nr
Match: XP_004145637.1 (PREDICTED: trichoplein keratin filament-binding protein [Cucumis sativus] >KGN57734.1 hypothetical protein Csa_3G270290 [Cucumis sativus])

HSP 1 Score: 601.7 bits (1550), Expect = 1.6e-168
Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 0


Query: 1   MAGLLSWAADVXXXXXXXXXXXXXXXXSIPLIFTPDQQNYVRELNQKAASLSRSVRDLRL 60
           MAGLLSWAADVXXXXXXXXXXXXXXXXSIPLIFTPDQQNYVRELNQKAASLSRSVRDLRL
Sbjct: 1   MAGLLSWAADVXXXXXXXXXXXXXXXXSIPLIFTPDQQNYVRELNQKAASLSRSVRDLRL 60

Query: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC 120
           RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC
Sbjct: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC 120

Query: 121 ENKIQEKRQEADLLLRKLEELEETTKNLEVELENAQAALENDESINFGKLTSKPSKVEAE 180
           ENKIQEKRQEADLLLRKLEELEETTKNLEVELENAQAALENDESINFGKLTSKPSKVEAE
Sbjct: 121 ENKIQEKRQEADLLLRKLEELEETTKNLEVELENAQAALENDESINFGKLTSKPSKVEAE 180

Query: 181 QDMELSKSALLDKLEIKKQELSSMEDTVKELEKNWAEIQDKALKQPSPVQREKMLDKQLH 240
           QDMELSKSALLDKLEIKKQELSSMEDTVKELEKNWAEIQDKALKQPSPVQREKMLDKQLH
Sbjct: 181 QDMELSKSALLDKLEIKKQELSSMEDTVKELEKNWAEIQDKALKQPSPVQREKMLDKQLH 240

Query: 241 SLMEQLAVKQAQAEGLASDIHLKEMELEKLKTSSRRLQSSSSEANIARNRFGKSMSDKNF 300
           SLMEQLAVKQAQAEGLASDIHLKEMELEKLKTSSRRLQSSSSEANIARNRFGKSMSDKNF
Sbjct: 241 SLMEQLAVKQAQAEGLASDIHLKEMELEKLKTSSRRLQSSSSEANIARNRFGKSMSDKNF 300

Query: 301 QDLLADSHHRLPYRSGGRSENQQRLMLFRSAFVVYILALHILVFIKISF 350
           QDLLADSHHRLPYRSGGRSENQQRLMLFRSAFVVYILALHILVFIKISF
Sbjct: 301 QDLLADSHHRLPYRSGGRSENQQRLMLFRSAFVVYILALHILVFIKISF 349

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BLAST of CsaV3_3G020470 vs. NCBI nr
Match: XP_008461579.1 (PREDICTED: centromere protein F [Cucumis melo])

HSP 1 Score: 566.6 bits (1459), Expect = 5.8e-158
Identity = 315/349 (90.26%), Postives = 324/349 (92.84%), Query Frame = 0


Query: 1   MAGLLSWAADVXXXXXXXXXXXXXXXXSIPLIFTPDQQNYVRELNQKAASLSRSVRDLRL 60
           MAGLLSWAADV                SIPLIFTP+QQNYVRELNQKAASLSRSVRDLRL
Sbjct: 1   MAGLLSWAADV-VAGGGGANHNDERSTSIPLIFTPEQQNYVRELNQKAASLSRSVRDLRL 60

Query: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC 120
           RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC
Sbjct: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC 120

Query: 121 ENKIQEKRQEADLLLRKLEELEETTKNLEVELENAQAALENDESINFGKLTSKPSKVEAE 180
           ENKIQEKRQEADLLLRKLE LEETTKNLEVELEN QAA  NDES NFGKLTSKPSKVEAE
Sbjct: 121 ENKIQEKRQEADLLLRKLEVLEETTKNLEVELENEQAAXXNDESTNFGKLTSKPSKVEAE 180

Query: 181 QDMELSKSALLDKLEIKKQELSSMEDTVKELEKNWAEIQDKALKQPSPVQREKMLDKQLH 240
           QDMELSKSALL+KL+IKKQELSSMEDT+KELEK WAEIQDKALKQPSPVQREKMLDKQLH
Sbjct: 181 QDMELSKSALLEKLDIKKQELSSMEDTIKELEKKWAEIQDKALKQPSPVQREKMLDKQLH 240

Query: 241 SLMEQLAVKQAQAEGLASDIHLKEMELEKLKTSSRRLQSSSSEANIARNRFGKSMSDKNF 300
           SL+EQLAVKQAQAEGLASDIHLKEMELEKL  SSRRLQSSSSEANIARNRFG+SMSDKNF
Sbjct: 241 SLIEQLAVKQAQAEGLASDIHLKEMELEKLNASSRRLQSSSSEANIARNRFGRSMSDKNF 300

Query: 301 QDLLADSHHRLPYRSGGRSENQQRLMLFRSAFVVYILALHILVFIKISF 350
           QD LA+SHH+LPYR+GGRSENQQRLMLFRSAFVVYILALHILVFIKISF
Sbjct: 301 QDHLAESHHKLPYRTGGRSENQQRLMLFRSAFVVYILALHILVFIKISF 348

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BLAST of CsaV3_3G020470 vs. NCBI nr
Match: XP_023528196.1 (uncharacterized protein PFB0145c [Cucurbita pepo subsp. pepo])

HSP 1 Score: 557.4 bits (1435), Expect = 3.5e-155
Identity = 309/349 (88.54%), Postives = 322/349 (92.26%), Query Frame = 0


Query: 1   MAGLLSWAADVXXXXXXXXXXXXXXXXSIPLIFTPDQQNYVRELNQKAASLSRSVRDLRL 60
           MAGLL+WAADV                SIP+IFTP+QQ YVRELNQKAASLSRS+RDLRL
Sbjct: 1   MAGLLAWAADV---VGGGANHDDEQTTSIPIIFTPEQQKYVRELNQKAASLSRSIRDLRL 60

Query: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC 120
           RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC
Sbjct: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC 120

Query: 121 ENKIQEKRQEADLLLRKLEELEETTKNLEVELENAQAALENDESINFGKLTSKPSKVEAE 180
           ENKIQEKRQEADLLLRKLEELEETTKNLEVELE AQAALE DESINFGKL SKPSKVEAE
Sbjct: 121 ENKIQEKRQEADLLLRKLEELEETTKNLEVELEQAQAALEKDESINFGKLASKPSKVEAE 180

Query: 181 QDMELSKSALLDKLEIKKQELSSMEDTVKELEKNWAEIQDKALKQPSPVQREKMLDKQLH 240
           QDME+SKSALL+KLEIKKQELSSMEDTVK+LEK WAEIQDKALKQPSPVQR KMLDKQLH
Sbjct: 181 QDMEVSKSALLEKLEIKKQELSSMEDTVKDLEKRWAEIQDKALKQPSPVQRVKMLDKQLH 240

Query: 241 SLMEQLAVKQAQAEGLASDIHLKEMELEKLKTSSRRLQSSSSEANIARNRFGKSMSDKNF 300
           SLMEQLAVKQAQAEGLASDIHLKEMELEKL  SSRRLQSSSSEANIARNRFG+SMSDKNF
Sbjct: 241 SLMEQLAVKQAQAEGLASDIHLKEMELEKLNASSRRLQSSSSEANIARNRFGRSMSDKNF 300

Query: 301 QDLLADSHHRLPYRSGGRSENQQRLMLFRSAFVVYILALHILVFIKISF 350
            D LADSHH+LPYR+GGRS++QQRLML RSAFV+YILALHILVFIKISF
Sbjct: 301 SDHLADSHHKLPYRTGGRSDSQQRLMLLRSAFVLYILALHILVFIKISF 346

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BLAST of CsaV3_3G020470 vs. NCBI nr
Match: XP_022935341.1 (uncharacterized protein PFB0145c [Cucurbita moschata])

HSP 1 Score: 553.9 bits (1426), Expect = 3.9e-154
Identity = 306/349 (87.68%), Postives = 321/349 (91.98%), Query Frame = 0


Query: 1   MAGLLSWAADVXXXXXXXXXXXXXXXXSIPLIFTPDQQNYVRELNQKAASLSRSVRDLRL 60
           MAGLL+WAADV                SIP+IFTP+QQ YVRELNQKAASLSRS+RDLRL
Sbjct: 1   MAGLLAWAADV---VGGGANHDDEQTTSIPIIFTPEQQKYVRELNQKAASLSRSIRDLRL 60

Query: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC 120
           RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC
Sbjct: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC 120

Query: 121 ENKIQEKRQEADLLLRKLEELEETTKNLEVELENAQAALENDESINFGKLTSKPSKVEAE 180
           ENKIQEKR EADLLLRKLEELEETTKNLEVELE AQAALE DESINFGKL SKPSKVEAE
Sbjct: 121 ENKIQEKRHEADLLLRKLEELEETTKNLEVELEQAQAALEKDESINFGKLASKPSKVEAE 180

Query: 181 QDMELSKSALLDKLEIKKQELSSMEDTVKELEKNWAEIQDKALKQPSPVQREKMLDKQLH 240
           QDME+SKSALL+KLEIKKQELSSMEDTVK+LEK WA++QDKALKQPSPVQR KMLDKQLH
Sbjct: 181 QDMEVSKSALLEKLEIKKQELSSMEDTVKDLEKRWADVQDKALKQPSPVQRVKMLDKQLH 240

Query: 241 SLMEQLAVKQAQAEGLASDIHLKEMELEKLKTSSRRLQSSSSEANIARNRFGKSMSDKNF 300
           SLMEQLAVKQAQAEGLASDIHLKEMELEKL  SSRRLQSSSSEANIARNRFG+SMSDKNF
Sbjct: 241 SLMEQLAVKQAQAEGLASDIHLKEMELEKLNASSRRLQSSSSEANIARNRFGRSMSDKNF 300

Query: 301 QDLLADSHHRLPYRSGGRSENQQRLMLFRSAFVVYILALHILVFIKISF 350
            D LADSHH+LPYR+GGRS++QQRLML RSAFV+YILALHILVFIKISF
Sbjct: 301 SDHLADSHHKLPYRTGGRSDSQQRLMLLRSAFVLYILALHILVFIKISF 346

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BLAST of CsaV3_3G020470 vs. NCBI nr
Match: XP_022983408.1 (rab11 family-interacting protein 3 [Cucurbita maxima])

HSP 1 Score: 550.8 bits (1418), Expect = 3.3e-153
Identity = 306/349 (87.68%), Postives = 320/349 (91.69%), Query Frame = 0


Query: 1   MAGLLSWAADVXXXXXXXXXXXXXXXXSIPLIFTPDQQNYVRELNQKAASLSRSVRDLRL 60
           MAGLL+WAADV                SIP+IFTP+QQ YVRELNQKAASLSRS+RDLRL
Sbjct: 1   MAGLLAWAADV---VGGGANHDDEQTTSIPIIFTPEQQKYVRELNQKAASLSRSIRDLRL 60

Query: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC 120
           +LPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEEN AYGKAISNC
Sbjct: 61  QLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENFAYGKAISNC 120

Query: 121 ENKIQEKRQEADLLLRKLEELEETTKNLEVELENAQAALENDESINFGKLTSKPSKVEAE 180
           ENKIQEKRQEADLLLRKLEELEETTKNLEVELE  QAALEND SINFGKL SKPSKVEAE
Sbjct: 121 ENKIQEKRQEADLLLRKLEELEETTKNLEVELEQEQAALENDVSINFGKLASKPSKVEAE 180

Query: 181 QDMELSKSALLDKLEIKKQELSSMEDTVKELEKNWAEIQDKALKQPSPVQREKMLDKQLH 240
           QDME+SKSALL+KLEIKKQELSSMEDTVK+LEK WAEIQDKALKQPSPVQR KMLDKQLH
Sbjct: 181 QDMEVSKSALLEKLEIKKQELSSMEDTVKDLEKRWAEIQDKALKQPSPVQRVKMLDKQLH 240

Query: 241 SLMEQLAVKQAQAEGLASDIHLKEMELEKLKTSSRRLQSSSSEANIARNRFGKSMSDKNF 300
           SLMEQLAVKQAQAEGLASDIHLKEMELEKL  SSRRLQSSSSEANIARNRFG+SMSDKNF
Sbjct: 241 SLMEQLAVKQAQAEGLASDIHLKEMELEKLNASSRRLQSSSSEANIARNRFGRSMSDKNF 300

Query: 301 QDLLADSHHRLPYRSGGRSENQQRLMLFRSAFVVYILALHILVFIKISF 350
            D LADSHH+LPYR+GGRSE+QQ+LML RSAFV+YILALHILVFIKISF
Sbjct: 301 LDHLADSHHKLPYRTGGRSESQQKLMLLRSAFVLYILALHILVFIKISF 346

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BLAST of CsaV3_3G020470 vs. TAIR10
Match: AT5G15880.1 (unknown protein)

HSP 1 Score: 341.7 bits (875), Expect = 5.5e-94
Identity = 204/351 (58.12%), Postives = 251/351 (71.51%), Query Frame = 0


Query: 1   MAGLLSWAADVXXXXXXXXXXXXXXXXSIPLIFTPDQQNYVRELNQKAASLSRSVRDLRL 60
           MAGLL+WAADV                 IPL+FT +QQ YV EL +KA +LSRS++DLRL
Sbjct: 1   MAGLLAWAADV---VGKNGKEGDDEKDRIPLVFTEEQQKYVDELGRKATNLSRSIQDLRL 60

Query: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC 120
           RLPPPDISQRLP LHAHSLAS A LTLQL++HS+TREQ  +RE +L EEN AY  AIS C
Sbjct: 61  RLPPPDISQRLPDLHAHSLASNAALTLQLDSHSATREQAHMREQTLLEENSAYENAISTC 120

Query: 121 ENKIQEKRQEADLLLRKLEELEETTKNLEVELENAQAALENDESINFGKLTSKP-SKVEA 180
           E KI+EKR EAD LLRKL+ELE   +NL+ E +NAQA+L+  +S +  +   +P    + 
Sbjct: 121 ETKIEEKRNEADSLLRKLKELEAVEENLKTEQDNAQASLDARQSKSSSETVIQPDGNGKD 180

Query: 181 EQDMELSKSALLDKLEIKKQELSSMEDTVKELEKNWAEIQDKALKQPSPVQREKMLDKQL 240
             D E  KS +L+KLE KK ++S ME+ V++LE++WA IQ++ALKQPSP QREK LDKQL
Sbjct: 181 GADTEAMKSFMLEKLESKKNDMSLMEEKVQDLERSWAVIQERALKQPSPAQREKTLDKQL 240

Query: 241 HSLMEQLAVKQAQAEGLASDIHLKEMELEKLKTSSRRLQSSSSEANIARNRFGKSMSDKN 300
           HSL+EQLA KQAQAEG+  +IHL EMELE+L    RR +S + E N ARNRF ++ SD+ 
Sbjct: 241 HSLIEQLAAKQAQAEGIVGEIHLNEMELERLNNLWRRYESFNVEGNAARNRFKRTNSDRE 300

Query: 301 F-QDLLADSHHRLPYRSGGRSENQQRLMLFRSAFVVYILALHILVFIKISF 350
           F  D   D H  LPY S  R+  Q RLM  RSAFVVYILAL +LVFI+ISF
Sbjct: 301 FTSDHEVDGHSYLPYSSATRNGTQTRLMYLRSAFVVYILALQVLVFIRISF 348

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BLAST of CsaV3_3G020470 vs. TrEMBL
Match: tr|A0A0A0L9S6|A0A0A0L9S6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G270290 PE=4 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 1.1e-168
Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 0


Query: 1   MAGLLSWAADVXXXXXXXXXXXXXXXXSIPLIFTPDQQNYVRELNQKAASLSRSVRDLRL 60
           MAGLLSWAADVXXXXXXXXXXXXXXXXSIPLIFTPDQQNYVRELNQKAASLSRSVRDLRL
Sbjct: 1   MAGLLSWAADVXXXXXXXXXXXXXXXXSIPLIFTPDQQNYVRELNQKAASLSRSVRDLRL 60

Query: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC 120
           RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC
Sbjct: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC 120

Query: 121 ENKIQEKRQEADLLLRKLEELEETTKNLEVELENAQAALENDESINFGKLTSKPSKVEAE 180
           ENKIQEKRQEADLLLRKLEELEETTKNLEVELENAQAALENDESINFGKLTSKPSKVEAE
Sbjct: 121 ENKIQEKRQEADLLLRKLEELEETTKNLEVELENAQAALENDESINFGKLTSKPSKVEAE 180

Query: 181 QDMELSKSALLDKLEIKKQELSSMEDTVKELEKNWAEIQDKALKQPSPVQREKMLDKQLH 240
           QDMELSKSALLDKLEIKKQELSSMEDTVKELEKNWAEIQDKALKQPSPVQREKMLDKQLH
Sbjct: 181 QDMELSKSALLDKLEIKKQELSSMEDTVKELEKNWAEIQDKALKQPSPVQREKMLDKQLH 240

Query: 241 SLMEQLAVKQAQAEGLASDIHLKEMELEKLKTSSRRLQSSSSEANIARNRFGKSMSDKNF 300
           SLMEQLAVKQAQAEGLASDIHLKEMELEKLKTSSRRLQSSSSEANIARNRFGKSMSDKNF
Sbjct: 241 SLMEQLAVKQAQAEGLASDIHLKEMELEKLKTSSRRLQSSSSEANIARNRFGKSMSDKNF 300

Query: 301 QDLLADSHHRLPYRSGGRSENQQRLMLFRSAFVVYILALHILVFIKISF 350
           QDLLADSHHRLPYRSGGRSENQQRLMLFRSAFVVYILALHILVFIKISF
Sbjct: 301 QDLLADSHHRLPYRSGGRSENQQRLMLFRSAFVVYILALHILVFIKISF 349

[Close]

BLAST of CsaV3_3G020470 vs. TrEMBL
Match: tr|A0A1S3CFI4|A0A1S3CFI4_CUCME (centromere protein F OS=Cucumis melo OX=3656 GN=LOC103500147 PE=4 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 3.8e-158
Identity = 315/349 (90.26%), Postives = 324/349 (92.84%), Query Frame = 0


Query: 1   MAGLLSWAADVXXXXXXXXXXXXXXXXSIPLIFTPDQQNYVRELNQKAASLSRSVRDLRL 60
           MAGLLSWAADV                SIPLIFTP+QQNYVRELNQKAASLSRSVRDLRL
Sbjct: 1   MAGLLSWAADV-VAGGGGANHNDERSTSIPLIFTPEQQNYVRELNQKAASLSRSVRDLRL 60

Query: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC 120
           RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC
Sbjct: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC 120

Query: 121 ENKIQEKRQEADLLLRKLEELEETTKNLEVELENAQAALENDESINFGKLTSKPSKVEAE 180
           ENKIQEKRQEADLLLRKLE LEETTKNLEVELEN QAA  NDES NFGKLTSKPSKVEAE
Sbjct: 121 ENKIQEKRQEADLLLRKLEVLEETTKNLEVELENEQAAXXNDESTNFGKLTSKPSKVEAE 180

Query: 181 QDMELSKSALLDKLEIKKQELSSMEDTVKELEKNWAEIQDKALKQPSPVQREKMLDKQLH 240
           QDMELSKSALL+KL+IKKQELSSMEDT+KELEK WAEIQDKALKQPSPVQREKMLDKQLH
Sbjct: 181 QDMELSKSALLEKLDIKKQELSSMEDTIKELEKKWAEIQDKALKQPSPVQREKMLDKQLH 240

Query: 241 SLMEQLAVKQAQAEGLASDIHLKEMELEKLKTSSRRLQSSSSEANIARNRFGKSMSDKNF 300
           SL+EQLAVKQAQAEGLASDIHLKEMELEKL  SSRRLQSSSSEANIARNRFG+SMSDKNF
Sbjct: 241 SLIEQLAVKQAQAEGLASDIHLKEMELEKLNASSRRLQSSSSEANIARNRFGRSMSDKNF 300

Query: 301 QDLLADSHHRLPYRSGGRSENQQRLMLFRSAFVVYILALHILVFIKISF 350
           QD LA+SHH+LPYR+GGRSENQQRLMLFRSAFVVYILALHILVFIKISF
Sbjct: 301 QDHLAESHHKLPYRTGGRSENQQRLMLFRSAFVVYILALHILVFIKISF 348

[Close]

BLAST of CsaV3_3G020470 vs. TrEMBL
Match: tr|W9RG40|W9RG40_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_009127 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 9.0e-107
Identity = 229/352 (65.06%), Postives = 273/352 (77.56%), Query Frame = 0


Query: 1   MAGLLSWAADVXXXXXXXXXXXXXXXXSIPLIFTPDQQNYVRELNQKAASLSRSVRDLRL 60
           MAGLL+WAADV                 IP++FTPDQQNYVREL+QKAASLSRS++DLRL
Sbjct: 1   MAGLLAWAADV--VGGGGQGNLEGDSNPIPVVFTPDQQNYVRELDQKAASLSRSIQDLRL 60

Query: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC 120
           RLPP DISQRLPHLHAHSLAS A L LQLNAHS+TREQ QLRE++LQEEN AY KAIS+C
Sbjct: 61  RLPPQDISQRLPHLHAHSLASNAALALQLNAHSATREQAQLREVTLQEENPAYEKAISSC 120

Query: 121 ENKIQEKRQEADLLLRKLEELEETTKNLEVELENAQAALENDESINFGKLTSKPSKV-EA 180
           E+KIQEK QEADLL RKLEE+EE  KNL VELENA+ A ++ +S +  +   + +K  E 
Sbjct: 121 ESKIQEKIQEADLLRRKLEEMEEAEKNLRVELENAETASDSSQSGSTEESAGESTKAFET 180

Query: 181 EQDMELSKSALLDKLEIKKQELSSMEDTVKELEKNWAEIQDKALKQPSPVQREKMLDKQL 240
            QD      A LD+LE KK+ELSSME  V  LEK W+++Q+ ALKQPSP QREK+LDKQL
Sbjct: 181 GQDTGDPNFAKLDELEKKKKELSSMEAIVHNLEKKWSQVQENALKQPSPAQREKILDKQL 240

Query: 241 HSLMEQLAVKQAQAEGLASDIHLKEMELEKLKTSSRRLQSSSSEANIARNRFGKSMSDKN 300
           HSL+EQLAVKQAQAEGL ++IH+KEMELE+LK   RRL+S+++EAN ARNRF +S  DK 
Sbjct: 241 HSLIEQLAVKQAQAEGLVNEIHIKEMELERLKGLWRRLESTNAEANTARNRFARSTFDKG 300

Query: 301 --FQDLLADSHHRLPYRSGGRSENQQRLMLFRSAFVVYILALHILVFIKISF 350
               D + + H + PY SGGRSE+QQRL+L RSAFV+YIL LHILVF+KISF
Sbjct: 301 SAASDYIVEPHQKAPYSSGGRSESQQRLVLLRSAFVLYILVLHILVFVKISF 350

[Close]

BLAST of CsaV3_3G020470 vs. TrEMBL
Match: tr|A0A061EIT0|A0A061EIT0_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_019611 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.2e-104
Identity = 224/351 (63.82%), Postives = 269/351 (76.64%), Query Frame = 0


Query: 1   MAGLLSWAADVXXXXXXXXXXXXXXXXSIPLIFTPDQQNYVRELNQKAASLSRSVRDLRL 60
           MAGLL+WAADV                +IPLIF+PDQQ YV+EL +KA+SL+R ++DLRL
Sbjct: 1   MAGLLAWAADV-VGGHGGNNSQEDDVDNIPLIFSPDQQKYVQELERKASSLTRLIQDLRL 60

Query: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTREQVQLREISLQEENVAYGKAISNC 120
           RLPPPDISQRLPHLHAHSLAS A L LQLN+HS+TREQ Q RE +LQ+EN AY KAISNC
Sbjct: 61  RLPPPDISQRLPHLHAHSLASNAALALQLNSHSATREQAQSREETLQQENAAYEKAISNC 120

Query: 121 ENKIQEKRQEADLLLRKLEELEETTKNLEVELENAQAALENDES-INFGKLTSKPSKVEA 180
           ENK+QEK QEAD L  KL+E+++  K+L+ ELENAQAAL+   S  +   +       E 
Sbjct: 121 ENKMQEKVQEADTLRSKLKEMDDIEKSLKAELENAQAALDVSHSGKSADSVVESTVGAEN 180

Query: 181 EQDMELSKSALLDKLEIKKQELSSMEDTVKELEKNWAEIQDKALKQPSPVQREKMLDKQL 240
           E  +E SKSA+LDKLE KK+E SS+E+TV++LE  W  IQ+KALKQPSP QREK LDKQL
Sbjct: 181 EASIEASKSAMLDKLEKKKKESSSIEETVQDLENKWENIQNKALKQPSPAQREKALDKQL 240

Query: 241 HSLMEQLAVKQAQAEGLASDIHLKEMELEKLKTSSRRLQSSSSEANIARNRFGKSMSDK- 300
           HSL+EQLA KQAQAEGL S+IHLKE ELE+L     +L+ +++E N ARNRFG+  SDK 
Sbjct: 241 HSLIEQLAAKQAQAEGLVSEIHLKEKELERLNGLWTKLELNNAEVNTARNRFGRGGSDKG 300

Query: 301 NFQDLLADSHHRLPYRSGGRSENQQRLMLFRSAFVVYILALHILVFIKISF 350
           +  D   D+HH+LPY SGGRSENQQRLML RSAFV+YILALHILVF+KISF
Sbjct: 301 SSSDFSVDAHHKLPYYSGGRSENQQRLMLLRSAFVLYILALHILVFVKISF 350

[Close]

BLAST of CsaV3_3G020470 vs. TrEMBL
Match: tr|A0A2P5F6W3|A0A2P5F6W3_9ROSA (Golgin family A protein OS=Trema orientalis OX=63057 GN=TorRG33x02_108090 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.2e-104
Identity = 240/359 (66.85%), Postives = 280/359 (77.99%), Query Frame = 0


Query: 1   MAGLLSWAADVXXXXXXXXXXXXXXXXSIPLIFTPDQQNYVRELNQKAASLSRSVRDLRL 60
           MAGLL+WAADVXXXXXXXXXXXXXX   IP++F+P+QQ YV+EL+QKAASLSRS++DLRL
Sbjct: 47  MAGLLAWAADVXXXXXXXXXXXXXXPNLIPIVFSPEQQRYVQELDQKAASLSRSIQDLRL 106

Query: 61  RLPPPDISQRLPHLHAHSLASTADLTLQLNAHSSTRE--------QVQLREISLQEENVA 120
           RLPPPDISQRLPHLHAHSLAS A L LQLN+HS+TRE        Q QLRE++LQEEN A
Sbjct: 107 RLPPPDISQRLPHLHAHSLASNAALALQLNSHSATREQFFTNPYGQAQLREVTLQEENAA 166

Query: 121 YGKAISNCENKIQEKRQEADLLLRKLEELEETTKNLEVELENAQAALENDESINFGKLTS 180
           + KAIS CENKIQEK QEA LL RKLEE+EE  KNL VELENAQ AL+   S        
Sbjct: 167 FEKAISTCENKIQEKMQEAGLLRRKLEEMEEIEKNLRVELENAQTALDASRSGGAEVSVV 226

Query: 181 KPSKVEAEQDMELSKSALLDKLEIKKQELSSMEDTVKELEKNWAEIQDKALKQPSPVQRE 240
           + +  E  QD   +K  +L++LE KK+ELS MED V  LEK W E+QDKALKQPSP QRE
Sbjct: 227 ESAASETGQDTAAAKFTILEELENKKKELSLMEDKVHVLEKAWLEVQDKALKQPSPAQRE 286

Query: 241 KMLDKQLHSLMEQLAVKQAQAEGLASDIHLKEMELEKLKTSSRRLQSSSSEANIARNRFG 300
           K+LDKQLHSL+EQLA KQAQAEGL S+IHLKEMELE L    R L+SS  EAN ARNRF 
Sbjct: 287 KILDKQLHSLIEQLAAKQAQAEGLVSEIHLKEMELENLNGLWRHLESSKIEANTARNRFV 346

Query: 301 KSMSDKNF--QDLLADSHHRLPYRSGGRSENQQRLMLFRSAFVVYILALHILVFIKISF 350
           +S S+K +   D + + +++ PY +GGR+E+QQRLML RSAFV+YIL LHILVFIKISF
Sbjct: 347 RSTSEKGYASSDYIVEPNYKSPYSAGGRNESQQRLMLLRSAFVLYILVLHILVFIKISF 405

The following BLAST results are available for this feature:

BLAST of CsaV3_3G020470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145637.1	1.6e-168	100.00	PREDICTED: trichoplein keratin filament-binding protein [Cucumis sativus] >KGN57...	[more]
XP_008461579.1	5.8e-158	90.26	PREDICTED: centromere protein F [Cucumis melo]	[more]
XP_023528196.1	3.5e-155	88.54	uncharacterized protein PFB0145c [Cucurbita pepo subsp. pepo]	[more]
XP_022935341.1	3.9e-154	87.68	uncharacterized protein PFB0145c [Cucurbita moschata]	[more]
XP_022983408.1	3.3e-153	87.68	rab11 family-interacting protein 3 [Cucurbita maxima]	[more]

BLAST of CsaV3_3G020470 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G15880.1	5.5e-94	58.12	unknown protein	[more]

BLAST of CsaV3_3G020470 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G020470 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L9S6\|A0A0A0L9S6_CUCSA	1.1e-168	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G270290 PE=4 SV=1	[more]
tr\|A0A1S3CFI4\|A0A1S3CFI4_CUCME	3.8e-158	90.26	centromere protein F OS=Cucumis melo OX=3656 GN=LOC103500147 PE=4 SV=1	[more]
tr\|W9RG40\|W9RG40_9ROSA	9.0e-107	65.06	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_009127 PE=4 SV=1	[more]
tr\|A0A061EIT0\|A0A061EIT0_THECC	3.2e-104	63.82	Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_019611 PE=4 ...	[more]
tr\|A0A2P5F6W3\|A0A2P5F6W3_9ROSA	4.2e-104	66.85	Golgin family A protein OS=Trema orientalis OX=63057 GN=TorRG33x02_108090 PE=4 S...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0044699	single-organism process
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0048193	Golgi vesicle transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G020470.1	CsaV3_3G020470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 117..165
None	No IPR available	COILS	Coil	Coil	coord: 187..221
None	No IPR available	COILS	Coil	Coil	coord: 41..61
None	No IPR available	PANTHER	PTHR37761	FAMILY NOT NAMED	coord: 1..349

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G020470	CSPI03G20500	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G020470	Cucsa.031560	Cucumber (Gy14) v1	cgycucB006
CsaV3_3G020470	CmaCh14G008010	Cucurbita maxima (Rimu)	cmacucB0281
CsaV3_3G020470	CmoCh14G008170	Cucurbita moschata (Rifu)	cmocucB0272
CsaV3_3G020470	Cp4.1LG03g06190	Cucurbita pepo (Zucchini)	cpecucB0749
CsaV3_3G020470	CsGy3G020210	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G020470	Carg22280	Silver-seed gourd	carcucB0518
CsaV3_3G020470	Cla007109	Watermelon (97103) v1	cucwmB256
CsaV3_3G020470	MELO3C023776	Melon (DHL92) v3.5.1	cucmeB249
CsaV3_3G020470	ClCG05G011990	Watermelon (Charleston Gray)	cucwcgB241
CsaV3_3G020470	Lsi05G003940	Bottle gourd (USVL1VR-Ls)	cuclsiB231
CsaV3_3G020470	MELO3C023776.2	Melon (DHL92) v3.6.1	cucmedB235
CsaV3_3G020470	Cla97C05G093910	Watermelon (97103) v2	cucwmbB220
CsaV3_3G020470	Bhi01G001449	Wax gourd	cucwgoB274

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G020470	Silver-seed gourd	carcucB0801
CsaV3_3G020470	Cucurbita maxima (Rimu)	cmacucB0547
CsaV3_3G020470	Cucurbita moschata (Rifu)	cmocucB0532
CsaV3_3G020470	Cucurbita pepo (Zucchini)	cpecucB0686