CsaV3_3G020410 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G020410
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	MYB-related transcription factor
Location	chr3 : 16505366 .. 16508789 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAGAATTGCTTGGGTTGGGTAAATATATTATGAATGATATTATTGGAGTATTTAAAAAAATGAAAAAAATAATAAAGGAAGAGAGTAAAGTGGAAATGAAAAAGGGAAAAAATGAGAAGAGAGATAAAAGAAAATAAAAAGGGAAGGGGGGCGCGTGAGAATAGTGAAAAAGGCGCGTGAGTCAGAAGCAAAATTCAGAGCAGGATCGAAGCTCCATAATAGCAACAGTACCTATCATCATCATCATCATCATCATCCTCTTCCTGCCCCCTGCCCCCCCCCTGCCCTCCATTTCTCCCTCTTCAATTTATCCTCAAAATCCCCACAATACCCTTCACTTCCATCTTCATCTTCATCTCTTTTCACCCTCTTCCCCTCTCTCTCTCTCTCTACACCTCTCTCTCTCTCTCTCTCTGCACCAGCTATGGTGTCTATGAAATGAAGGACCGCCAACGCTGGCAGCCTGAAGAAGACGCCCTTCTCCGAGCTTACGTCAAACAATATGGCCCTAAAGAATGGAATCTCATCTCTCACCGTATGCCCAACCCTCTCCATCGCGACCCTAAATCCTGCCTCGAACGCTGGAAAAATTACCTCAAACCTGGCTTGAAGAAAGGCTCTCTTTCCCCTGAAGAGCAGTCCCTCGTTATCTCTCTTCAGGCCAAGTACGGCAACAAGTGGAAGAAGATTGCCGCCGAGGTCCCCGGCCGTACCCCCAAACGTCTCGGTAAGTGGTGGGAGGTTTTTAAAGAGAAACAGCTTAAACAGTTACACAAGGCCAACAACTTAACACAATCCTCTCTCGACCCCAATCTTCCTATTTCTCTTGCTGTTTCCTCCCCCGAGAAAGCGCTTCAAGGCCCTTACGACCATATTTTGGAGACCTTCGCTGAGAAGTACGTTCAGCCTAAGCTTTATCCTCATCCAAATTCTATCCCTGACGCCGATCCCCTGCTTTCTCTTGGATCGGTTACCTCTACCACCTCCTCTTCCACTCTTCTTCCTCTCTGGATGAATGTTAACTCCACCAGCACTGCTTCTTCTTCCACTTGCTCAACTACGCCGTCTCCCTCCGTCAGTTTAACGCTATCTCCATCTGAACCTGGGTGTTTGGAGTCGGAAGTTAACCGGATCGGAGCCTTAGTTCAGTACTGTAAGGAGGTGGAAGAAGGGCGGCAGAGTTGGGTTCAACACAAGAAGGAAGCTAGCTGGAGATTGAATCGATTAGAGCAACAACTGGAATCGGAGAAAGCGAGGAAGAAAAGAGAGAAAATGGAGGAGATGGAAGCCAAAATACAGAGGTTGAGAGAAGAAGAAAGGGTTTATTTAGGAGGAATCGAGAGGGATTACAGAGAACAGTTGAATGCTTTGCGAAGAGAAGCGGATTGTAAAGAGGCGAAGCTTGTGGAAGATTGGTGTAATAAGCATTCGAAATTGGCGAAGCTAGTGGAGAAATTTGGAGGTCATGGGTTGTTGGGTGTTTCCAAGGACATTGTTCATTGAAGCTCTGCTTCCATGGCGGTGTGAGTTCAAAATGCAGGTTGGTTTTTTCTCTCTGTACCTGTTTCTTTTTACATTACATAGACTCTGTTTTTTTGTTGGGAACAAATTCGATAATCAAAGGGAAGAAGAAGAAGAAGAAGATTAAAAAGTAAGTAATAAAACAAAAGATGGAAAATCTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCATTCCAATGGGATCTTATTATTAATTAAATAATAAAATTTAATTCTACGAGACTTTCATTACTTCTCATCTTTTGTCTTTTGAATTGATTTGGTATTAATATATGGTATATGGAGATTAATCATCAAAAATTGTTTAAATTGTTTGGAATAGTGTTTATTTCAGTTCATTGATTGTGAGAATAATTGTGAGAATGTGGATAGAGATGGAAACTCCAAGTTGAGTTGAAGGGTAGTACATTTGAGTTATTGAAATCAAAATAGAAATACAGGGCCATACATGGTTTGAATCTTTGATTTCATTTCTTGGTTAACATGTGTTTTGTTATAAAAATTATAATAATAGTAGTAAGATTTGAAACCCATAAATTAAAGTGTGTTTTGTTATATTATATTATATTAGTATTTGTCAATTATGAGAATGCATCATTGAGTAATTTCAAGTTCTGTCATGTATCGGTTAAGTTAAGATTTGGGAGATATTATTTTCACAATAATAGTTAGTTGTTCAACAAAATAGTAATCATATTACACAAGGAATAAAACTTTTAACTATTCCTTTAAGAAAAAACTCCCCACTATTGGAAACAATCTCATTTGTAACACTATCTAATAAAGGAAAGTGCAAGTGAAATTAAATACTGTTTTTCCTTTCTTTTTATATATTTGAAAGCATTTGATTCCATGTATTAGGATGGCTGATGTCTGATTTGACTTATTGACTGAACTTCCAACCATACATTATACTACTAACTTTTTATACCTCATTGAAAGTATATTAAACAAAAGTTTTGCTAATCAAATGTTGAACTTATTTTTGGAAGAAGCAAGAAGCCATATAGCTGCCTACTAATGAAAGTAACACCAGATTGCGAAAGTAAGACACGGATTGTAAAAACTAATGCAATTATGTTCCTAAATTTTAAACTACATCTTCAAACTTACATAGTTAAATATTGTAATAATTGATGGTCCACTTTTTATTATAGGGATGTTCAATTTGTACAAAGCATGAGTATTCAATTTTGACATTATAGAATTTGAAAGCCTAGCTTTTATGATTGAACAATTATATTCCAATCGTAAATTTATGTGGATTTGCATGGTGGAAGGGCAAGACTATTGAGAATTATTCATAACACATCTTTGGTCACTTATGTGATAAACTATTGGTCTAAAACAAGTATTATGATTAGAATAGATTATCATTATTAATAGTTTTAGGATAGTTTTAGGATAGTTTTAGGATAGTTTTAGGATTTAGGGTGGTGATTTAAACTTCTTTAGCCAAGAACAGAACATATGAATTATTCAGTTGGGTTATTTTAAAGTTTAGTACAACAAAAAATAATTTATATTTGATTGAATAGAAATTTGTTAGTAGAGGTAGACCTAATTACATTAAATCTTTTGTCTCAACAATCTCAACAATCCATGACATTTGGAATGATGATTGGTACAATGTAGAGTGAGCTATTCTATTCTTGAATTAACAAAGAGTTAAAATTGTGTTTACGTTGGTTGCTAATATATTAACTAGATGAGGGAAATTGTTCGCAAGATTTTGGGCGTTGGAGGAATTTTTTTTTTTTTTAAATATGATTTTTATGGGGAATGTTTTAATAATAAAAATATGATTTACATATTATTTAGTCGCTGTCGTAATGTTATAATTAAGGATGAAGGGAATTAATAAAGTAGCGGAG

mRNA sequence

ATGAAGGACCGCCAACGCTGGCAGCCTGAAGAAGACGCCCTTCTCCGAGCTTACGTCAAACAATATGGCCCTAAAGAATGGAATCTCATCTCTCACCGTATGCCCAACCCTCTCCATCGCGACCCTAAATCCTGCCTCGAACGCTGGAAAAATTACCTCAAACCTGGCTTGAAGAAAGGCTCTCTTTCCCCTGAAGAGCAGTCCCTCGTTATCTCTCTTCAGGCCAAGTACGGCAACAAGTGGAAGAAGATTGCCGCCGAGGTCCCCGGCCGTACCCCCAAACGTCTCGGTAAGTGGTGGGAGGTTTTTAAAGAGAAACAGCTTAAACAGTTACACAAGGCCAACAACTTAACACAATCCTCTCTCGACCCCAATCTTCCTATTTCTCTTGCTGTTTCCTCCCCCGAGAAAGCGCTTCAAGGCCCTTACGACCATATTTTGGAGACCTTCGCTGAGAAGTACGTTCAGCCTAAGCTTTATCCTCATCCAAATTCTATCCCTGACGCCGATCCCCTGCTTTCTCTTGGATCGGTTACCTCTACCACCTCCTCTTCCACTCTTCTTCCTCTCTGGATGAATGTTAACTCCACCAGCACTGCTTCTTCTTCCACTTGCTCAACTACGCCGTCTCCCTCCGTCAGTTTAACGCTATCTCCATCTGAACCTGGGTGTTTGGAGTCGGAAGTTAACCGGATCGGAGCCTTAGTTCAGTACTGTAAGGAGGTGGAAGAAGGGCGGCAGAGTTGGGTTCAACACAAGAAGGAAGCTAGCTGGAGATTGAATCGATTAGAGCAACAACTGGAATCGGAGAAAGCGAGGAAGAAAAGAGAGAAAATGGAGGAGATGGAAGCCAAAATACAGAGGTTGAGAGAAGAAGAAAGGGTTTATTTAGGAGGAATCGAGAGGGATTACAGAGAACAGTTGAATGCTTTGCGAAGAGAAGCGGATTGTAAAGAGGCGAAGCTTGTGGAAGATTGGTGTAATAAGCATTCGAAATTGGCGAAGCTAGTGGAGAAATTTGGAGGTCATGGGTTGTTGGGTGTTTCCAAGGACATTGTTCATTGA

Coding sequence (CDS)

ATGAAGGACCGCCAACGCTGGCAGCCTGAAGAAGACGCCCTTCTCCGAGCTTACGTCAAACAATATGGCCCTAAAGAATGGAATCTCATCTCTCACCGTATGCCCAACCCTCTCCATCGCGACCCTAAATCCTGCCTCGAACGCTGGAAAAATTACCTCAAACCTGGCTTGAAGAAAGGCTCTCTTTCCCCTGAAGAGCAGTCCCTCGTTATCTCTCTTCAGGCCAAGTACGGCAACAAGTGGAAGAAGATTGCCGCCGAGGTCCCCGGCCGTACCCCCAAACGTCTCGGTAAGTGGTGGGAGGTTTTTAAAGAGAAACAGCTTAAACAGTTACACAAGGCCAACAACTTAACACAATCCTCTCTCGACCCCAATCTTCCTATTTCTCTTGCTGTTTCCTCCCCCGAGAAAGCGCTTCAAGGCCCTTACGACCATATTTTGGAGACCTTCGCTGAGAAGTACGTTCAGCCTAAGCTTTATCCTCATCCAAATTCTATCCCTGACGCCGATCCCCTGCTTTCTCTTGGATCGGTTACCTCTACCACCTCCTCTTCCACTCTTCTTCCTCTCTGGATGAATGTTAACTCCACCAGCACTGCTTCTTCTTCCACTTGCTCAACTACGCCGTCTCCCTCCGTCAGTTTAACGCTATCTCCATCTGAACCTGGGTGTTTGGAGTCGGAAGTTAACCGGATCGGAGCCTTAGTTCAGTACTGTAAGGAGGTGGAAGAAGGGCGGCAGAGTTGGGTTCAACACAAGAAGGAAGCTAGCTGGAGATTGAATCGATTAGAGCAACAACTGGAATCGGAGAAAGCGAGGAAGAAAAGAGAGAAAATGGAGGAGATGGAAGCCAAAATACAGAGGTTGAGAGAAGAAGAAAGGGTTTATTTAGGAGGAATCGAGAGGGATTACAGAGAACAGTTGAATGCTTTGCGAAGAGAAGCGGATTGTAAAGAGGCGAAGCTTGTGGAAGATTGGTGTAATAAGCATTCGAAATTGGCGAAGCTAGTGGAGAAATTTGGAGGTCATGGGTTGTTGGGTGTTTCCAAGGACATTGTTCATTGA

Protein sequence

MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKGSLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQSSLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTSTTSSSTLLPLWMNVNSTSTASSSTCSTTPSPSVSLTLSPSEPGCLESEVNRIGALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESEKARKKREKMEEMEAKIQRLREEERVYLGGIERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH

Homology

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BLAST of CsaV3_3G020410 vs. NCBI nr
Match: XP_011651362.1 (PREDICTED: transcription factor AS1-like [Cucumis sativus] >KGN57728.1 hypothetical protein Csa_3G264750 [Cucumis sativus])

HSP 1 Score: 593.6 bits (1529), Expect = 4.5e-166
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS 180
           SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS
Sbjct: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGCLESEVNRIGALVQYCK 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGCLESEVNRIGALVQYCK
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGCLESEVNRIGALVQYCK 240

Query: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESXXXXXXXXXXXXXXXXIQRLREEERVYLGGI 300
           EVEEGRQSWVQHKKEASWRLNRLEQQLESXXXXXXXXXXXXXXXXIQRLREEERVYLGGI
Sbjct: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESXXXXXXXXXXXXXXXXIQRLREEERVYLGGI 300

Query: 301 ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH 355
           ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH
Sbjct: 301 ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH 354

[Close]

BLAST of CsaV3_3G020410 vs. NCBI nr
Match: XP_008461573.1 (PREDICTED: LOW QUALITY PROTEIN: transcription factor AS1-like [Cucumis melo])

HSP 1 Score: 544.3 bits (1401), Expect = 3.1e-151
Identity = 332/354 (93.79%), Postives = 334/354 (94.35%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS 180
           SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYP                   
Sbjct: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGCLESEVNRIGALVQYCK 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGCLESEVNRIGALVQYCK
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGCLESEVNRIGALVQYCK 240

Query: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESXXXXXXXXXXXXXXXXIQRLREEERVYLGGI 300
           EVEEGRQSWVQHKKEASWRLNRLEQQLESXXXXXXXXXXXXXXXXIQRLREEERVYLGGI
Sbjct: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESXXXXXXXXXXXXXXXXIQRLREEERVYLGGI 300

Query: 301 ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH 355
           ERDY+EQLNAL+READCKEAKLVEDWCNKHSKL KLVEKFGGHGLLGVSKDIVH
Sbjct: 301 ERDYKEQLNALQREADCKEAKLVEDWCNKHSKLVKLVEKFGGHGLLGVSKDIVH 354

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BLAST of CsaV3_3G020410 vs. NCBI nr
Match: XP_022935393.1 (protein rough sheath 2 homolog [Cucurbita moschata])

HSP 1 Score: 453.4 bits (1165), Expect = 7.3e-124
Identity = 290/378 (76.72%), Postives = 314/378 (83.07%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM  PLHRDPKSCLERWKNYLKP LKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPDLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQ- 120
           SLSP+EQ+LVISLQAKYGNKWKKIAAEVPGRT KRLGKWWEVF+EKQLKQL K  NLTQ 
Sbjct: 61  SLSPDEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFREKQLKQLQKTQNLTQR 120

Query: 121 ---SSLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLY--------PHPN-SIP 180
               + D N+P+ + VSSPEKA+QGPYDHILETFAEKYVQPK+Y        P P  S+P
Sbjct: 121 RDYQNSDGNIPV-VGVSSPEKAVQGPYDHILETFAEKYVQPKIYAAAFQSPPPPPRLSVP 180

Query: 181 DADPLLSLGSVTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGCLES 240
           +ADP+LSLGSV+S          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEP  LES
Sbjct: 181 EADPVLSLGSVSSTTSSPTVLPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPAILES 240

Query: 241 EVNRI------GALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESXXXXXXXXXXXX 300
           EVNRI      GALVQYCK++EEGRQ+WVQHKKEA+WRLNRLEQQLES XXXXXXXXXXX
Sbjct: 241 EVNRILPVQQMGALVQYCKDLEEGRQNWVQHKKEATWRLNRLEQQLESEXXXXXXXXXXX 300

Query: 301 XXXXIQRLREEERVYLGGIERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFG 355
           XXXX    REEE  YLG IE DYREQL+AL+R+AD KEAKLVE WC+KH+KLAKLVEK+G
Sbjct: 301 XXXXXXXXREEEMAYLGRIESDYREQLSALQRDADSKEAKLVESWCSKHAKLAKLVEKYG 360

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BLAST of CsaV3_3G020410 vs. NCBI nr
Match: XP_023528710.1 (protein rough sheath 2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 452.2 bits (1162), Expect = 1.6e-123
Identity = 289/378 (76.46%), Postives = 313/378 (82.80%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM  PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQ- 120
           SLSP+EQ+LVISLQAKYGNKWKKIAAEVPGRT KRLGKWWEVFKEKQLKQL K  NLTQ 
Sbjct: 61  SLSPDEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKTQNLTQR 120

Query: 121 ---SSLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLY--------PHPN-SIP 180
               + D N+PI + VSSPEK +QGPYDHILETFAEKYVQPK+Y        P P  S+P
Sbjct: 121 RDYQNSDGNIPI-VGVSSPEKTVQGPYDHILETFAEKYVQPKIYAAAFQSPPPPPRLSVP 180

Query: 181 DADPLLSLGSVTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGCLES 240
           +ADP+LSLGSV+S           XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    LES
Sbjct: 181 EADPVLSLGSVSSTTSSPTVLPLWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAILES 240

Query: 241 EVNRI------GALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESXXXXXXXXXXXX 300
           EVNRI      GALVQYCK++EEGRQ+WVQHKKEA+WRLNRLEQQLES XXXXXXXXXXX
Sbjct: 241 EVNRILPVQQMGALVQYCKDLEEGRQNWVQHKKEATWRLNRLEQQLESEXXXXXXXXXXX 300

Query: 301 XXXXIQRLREEERVYLGGIERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFG 355
           XXXX   LREEE  YLG IE +YREQL+AL+R+AD KEAKLVE WC+KH+KLAKLVEK+G
Sbjct: 301 XXXXXXXLREEEMAYLGRIESNYREQLSALQRDADSKEAKLVESWCSKHAKLAKLVEKYG 360

[Close]

BLAST of CsaV3_3G020410 vs. NCBI nr
Match: XP_022983442.1 (protein rough sheath 2 homolog [Cucurbita maxima])

HSP 1 Score: 439.9 bits (1130), Expect = 8.3e-120
Identity = 286/381 (75.07%), Postives = 309/381 (81.10%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLIS RM  PLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISQRMGKPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQ- 120
           SLSP+EQ+LVISLQAKYGNKWKKIAAEVPGRT KRLGKWWEVFKEKQLKQL K  NLTQ 
Sbjct: 61  SLSPDEQTLVISLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQLKQLQKTQNLTQR 120

Query: 121 ---SSLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLY------------PHPN 180
               + D N+PI + VSSPEKA+QGPYDHILETFAEKYVQPK+Y                
Sbjct: 121 HDYQNSDGNIPI-VGVSSPEKAVQGPYDHILETFAEKYVQPKIYAAAFXXXXXXXXXXXL 180

Query: 181 SIPDADPLLSLGSVTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGC 240
           S+P+ADP+LSLGSV+S         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEP  
Sbjct: 181 SVPEADPVLSLGSVSSTTSSPTVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPAI 240

Query: 241 LESEVNRI------GALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESXXXXXXXXX 300
            E+EVNRI      GALVQYCK++EEGRQSWVQHKKEA+WRLNRLE+QLES XXXXXXXX
Sbjct: 241 NETEVNRILPVQQMGALVQYCKDLEEGRQSWVQHKKEATWRLNRLEKQLESEXXXXXXXX 300

Query: 301 XXXXXXXIQRLREEERVYLGGIERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVE 355
           XXXXXXX          YLG IE DYREQL+AL+R+AD KEAKLVE WC+KH+ LAKLVE
Sbjct: 301 XXXXXXXXXXXXXXXXAYLGRIESDYREQLSALQRDADSKEAKLVESWCSKHAXLAKLVE 360

[Close]

BLAST of CsaV3_3G020410 vs. TAIR10
Match: AT2G37630.1 (myb-like HTH transcriptional regulator family protein)

HSP 1 Score: 249.6 bits (636), Expect = 2.9e-66
Identity = 172/375 (45.87%), Postives = 213/375 (56.80%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW  EEDALLRAYV+Q+GP+EW+L+S RM  PL+RD KSCLERWKNYLKPG+KKG
Sbjct: 1   MKERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SL+ EEQ LVI LQ K+GNKWKKIAAEVPGRT KRLGKWWEVFKEKQ ++  ++N   + 
Sbjct: 61  SLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESNKRVE- 120

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPK---------------------- 180
                 PI           +  YD ILE+FAEK V+ +                      
Sbjct: 121 ------PID----------ESKYDRILESFAEKLVKERSNVXXXXXXXXXXXXXXXXXXX 180

Query: 181 -------------LYPHPNSIPDADPLLSLGSVTSXXXXXXXXXXXXXXXXXXXXXXXXX 240
                                              XXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQP 240

Query: 241 XXXXXXXXXXXXXXXEPGCL-ESEVNRIGALVQYCKEVEEGRQSWVQHKKEASWRLNRLE 300
                           P C   SE   +  LV+ C+E+EEG ++W  HKKEA+WRL RLE
Sbjct: 241 ERAENGPGGLVLGSMMPSCSGSSESVFLSELVECCRELEEGHRAWADHKKEAAWRLRRLE 300

Query: 301 QQLESXXXXXXXXXXXXXXXXIQRLREEERVYLGGIERDYREQLNALRREADCKEAKLVE 340
            QLES                ++ LREE++  +  IE +YREQL  LRR+A+ K+ KL +
Sbjct: 301 LQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLRRDAEAKDQKLAD 358

[Close]

BLAST of CsaV3_3G020410 vs. TAIR10
Match: AT1G25340.1 (myb domain protein 116)

HSP 1 Score: 100.5 bits (249), Expect = 2.2e-21
Identity = 47/110 (42.73%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W  EED LL  Y+   G   WNL++    + L R  KSC  RW NYLKP +K+G+L+P+E
Sbjct: 23  WTLEEDTLLTNYISHNGEGRWNLLA--KSSGLKRAGKSCRLRWLNYLKPDIKRGNLTPQE 82

Query: 67  QSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANN 117
           Q L++ L +K+GN+W KI+  +PGRT   +  +W    +KQ +QL+  +N
Sbjct: 83  QLLILELHSKWGNRWSKISKYLPGRTDNDIKNYWRTRVQKQARQLNIDSN 130

[Close]

BLAST of CsaV3_3G020410 vs. TAIR10
Match: AT5G52600.1 (myb domain protein 82)

HSP 1 Score: 99.4 bits (246), Expect = 4.8e-21
Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 4   RQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKGSLS 63
           R  W+PEED +L++YV+ +G   W  IS R  + L R  KSC  RWKNYL+P +K+GS+S
Sbjct: 14  RGLWKPEEDMILKSYVETHGEGNWADISRR--SGLKRGGKSCRLRWKNYLRPNIKRGSMS 73

Query: 64  PEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQ 108
           P+EQ L+I +    GN+W  IA  +PGRT   +  +W     K+
Sbjct: 74  PQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 115

[Close]

BLAST of CsaV3_3G020410 vs. TAIR10
Match: AT1G68320.1 (myb domain protein 62)

HSP 1 Score: 97.1 bits (240), Expect = 2.4e-20
Identity = 47/113 (41.59%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 4   RQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKGSLS 63
           R  W  EED LL  Y+   G   WN ++      L R  KSC  RW NYLKP +++G+L+
Sbjct: 21  RGPWTLEEDTLLTNYILHNGEGRWNHVAKCA--GLKRTGKSCRLRWLNYLKPDIRRGNLT 80

Query: 64  PEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANN 117
           P+EQ L++ L +K+GN+W KIA  +PGRT   +  +W    +KQ +QL+  +N
Sbjct: 81  PQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQLNIESN 131

[Close]

BLAST of CsaV3_3G020410 vs. TAIR10
Match: AT3G46130.1 (myb domain protein 48)

HSP 1 Score: 96.7 bits (239), Expect = 3.1e-20
Identity = 43/104 (41.35%), Postives = 66/104 (63.46%), Query Frame = 0


Query: 7   WQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKGSLSPEE 66
           W  +ED LL  +V  +G + W+ I+    + L+R  KSC  RW NYL PGLK+G ++P+E
Sbjct: 12  WTEQEDILLVNFVHLFGDRRWDFIA--KVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQE 71

Query: 67  QSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQ 111
           + LV+ L AK+GN+W KIA ++PGRT   +  +W     K+ ++
Sbjct: 72  ERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQE 113

[Close]

BLAST of CsaV3_3G020410 vs. Swiss-Prot
Match: sp|Q9S7B2|RS2_MAIZE (Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 3.8e-68
Identity = 191/371 (51.48%), Postives = 237/371 (63.88%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW+PEEDA+LRAYV+QYGP+EW+L+S RM   L RD KSCLERWKNYL+PG+KKG
Sbjct: 1   MKERQRWRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SL+ EEQ LVI LQAK+GNKWKKIAAEVPGRT KRLGKWWEVFKEKQ ++L        S
Sbjct: 61  SLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELR------DS 120

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYV-----QPKLYPHP--NSIPDADPLL 180
              P  P      SP++  +G Y+ +LE FAEK V     Q    P P   + P   P L
Sbjct: 121 RRPPPEP------SPDE--RGRYEWLLENFAEKLVGERPQQAAAAPSPLLMAAPVLPPWL 180

Query: 181 SLGSVTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE------------ 240
           S  +   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +            
Sbjct: 181 SSNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWMPDRAAADAAPYGFP 240

Query: 241 ----------PGCLESEVNRIGALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESXX 300
                     PG    +   +  L + C+E+EEGR++W  H++EA+WRL R+EQQLE   
Sbjct: 241 SPSQHGGAAPPGMAVVDGQALAELAECCRELEEGRRAWAAHRREAAWRLKRVEQQLEMER 300

Query: 301 XXXXXXXXXXXXXXIQRLREEERVYLGGIERDYREQLNALRREADCKEAKLVEDWCNKHS 343
                         ++ +R E+      +ERD+RE++  LRR+A  KE K+ E W  KH+
Sbjct: 301 EMRRREVWEEFEAKMRTMRLEQAAAAERVERDHREKVAELRRDAQVKEEKMAEQWAAKHA 357

[Close]

BLAST of CsaV3_3G020410 vs. Swiss-Prot
Match: sp|O80931|AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 5.2e-65
Identity = 172/375 (45.87%), Postives = 213/375 (56.80%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRW  EEDALLRAYV+Q+GP+EW+L+S RM  PL+RD KSCLERWKNYLKPG+KKG
Sbjct: 1   MKERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SL+ EEQ LVI LQ K+GNKWKKIAAEVPGRT KRLGKWWEVFKEKQ ++  ++N   + 
Sbjct: 61  SLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESNKRVE- 120

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPK---------------------- 180
                 PI           +  YD ILE+FAEK V+ +                      
Sbjct: 121 ------PID----------ESKYDRILESFAEKLVKERSNVXXXXXXXXXXXXXXXXXXX 180

Query: 181 -------------LYPHPNSIPDADPLLSLGSVTSXXXXXXXXXXXXXXXXXXXXXXXXX 240
                                              XXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQP 240

Query: 241 XXXXXXXXXXXXXXXEPGCL-ESEVNRIGALVQYCKEVEEGRQSWVQHKKEASWRLNRLE 300
                           P C   SE   +  LV+ C+E+EEG ++W  HKKEA+WRL RLE
Sbjct: 241 ERAENGPGGLVLGSMMPSCSGSSESVFLSELVECCRELEEGHRAWADHKKEAAWRLRRLE 300

Query: 301 QQLESXXXXXXXXXXXXXXXXIQRLREEERVYLGGIERDYREQLNALRREADCKEAKLVE 340
            QLES                ++ LREE++  +  IE +YREQL  LRR+A+ K+ KL +
Sbjct: 301 LQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVGLRRDAEAKDQKLAD 358

[Close]

BLAST of CsaV3_3G020410 vs. Swiss-Prot
Match: sp|Q94IB1|RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.5e-53
Identity = 155/269 (57.62%), Postives = 188/269 (69.89%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           M++RQRW+PEEDA+L AYV+QYGP+EW+L+S RM  PLHRD KSCLERWKNYL+PG+KKG
Sbjct: 6   MRERQRWRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKG 65

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SL+ +EQ LVI LQAK+GNKWKKIAAEVPGRT KRLGKWWEVFKEKQ ++L   +   + 
Sbjct: 66  SLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELRDRD---RR 125

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS 180
            L P L              G YD +LE FA+K                  L++      
Sbjct: 126 RLPPPLD-----GDERGCAGGRYDWLLEDFADK------------------LVNXXXXXX 185

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGCLESEVNRIGALVQYCK 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               ++ C+
Sbjct: 186 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMECCR 245

Query: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLES 270
           E+EEG+++W  H+KEA+WR+ R+E QLE+
Sbjct: 246 EMEEGQRAWAAHRKEAAWRMKRVEMQLET 248

[Close]

BLAST of CsaV3_3G020410 vs. Swiss-Prot
Match: sp|Q9LTF7|MYB82_ARATH (Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 8.7e-20
Identity = 46/104 (44.23%), Postives = 65/104 (62.50%), Query Frame = 0


Query: 4   RQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKGSLS 63
           R  W+PEED +L++YV+ +G   W  IS R  + L R  KSC  RWKNYL+P +K+GS+S
Sbjct: 14  RGLWKPEEDMILKSYVETHGEGNWADISRR--SGLKRGGKSCRLRWKNYLRPNIKRGSMS 73

Query: 64  PEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQ 108
           P+EQ L+I +    GN+W  IA  +PGRT   +  +W     K+
Sbjct: 74  PQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKK 115

[Close]

BLAST of CsaV3_3G020410 vs. Swiss-Prot
Match: sp|Q9C9G7|MYB62_ARATH (Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 4.3e-19
Identity = 47/113 (41.59%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 4   RQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKGSLS 63
           R  W  EED LL  Y+   G   WN ++      L R  KSC  RW NYLKP +++G+L+
Sbjct: 21  RGPWTLEEDTLLTNYILHNGEGRWNHVAKCA--GLKRTGKSCRLRWLNYLKPDIRRGNLT 80

Query: 64  PEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANN 117
           P+EQ L++ L +K+GN+W KIA  +PGRT   +  +W    +KQ +QL+  +N
Sbjct: 81  PQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKQARQLNIESN 131

[Close]

BLAST of CsaV3_3G020410 vs. TrEMBL
Match: tr|A0A0A0L7E6|A0A0A0L7E6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G264750 PE=4 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 3.0e-166
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS 180
           SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS
Sbjct: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGCLESEVNRIGALVQYCK 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGCLESEVNRIGALVQYCK
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGCLESEVNRIGALVQYCK 240

Query: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESXXXXXXXXXXXXXXXXIQRLREEERVYLGGI 300
           EVEEGRQSWVQHKKEASWRLNRLEQQLESXXXXXXXXXXXXXXXXIQRLREEERVYLGGI
Sbjct: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESXXXXXXXXXXXXXXXXIQRLREEERVYLGGI 300

Query: 301 ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH 355
           ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH
Sbjct: 301 ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH 354

[Close]

BLAST of CsaV3_3G020410 vs. TrEMBL
Match: tr|A0A1S3CEX4|A0A1S3CEX4_CUCME (LOW QUALITY PROTEIN: transcription factor AS1-like OS=Cucumis melo OX=3656 GN=LOC103500142 PE=4 SV=1)

HSP 1 Score: 544.3 bits (1401), Expect = 2.1e-151
Identity = 332/354 (93.79%), Postives = 334/354 (94.35%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG
Sbjct: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120

Query: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPHPNSIPDADPLLSLGSVTS 180
           SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYP                   
Sbjct: 121 SLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGCLESEVNRIGALVQYCK 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGCLESEVNRIGALVQYCK
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGCLESEVNRIGALVQYCK 240

Query: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESXXXXXXXXXXXXXXXXIQRLREEERVYLGGI 300
           EVEEGRQSWVQHKKEASWRLNRLEQQLESXXXXXXXXXXXXXXXXIQRLREEERVYLGGI
Sbjct: 241 EVEEGRQSWVQHKKEASWRLNRLEQQLESXXXXXXXXXXXXXXXXIQRLREEERVYLGGI 300

Query: 301 ERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGGHGLLGVSKDIVH 355
           ERDY+EQLNAL+READCKEAKLVEDWCNKHSKL KLVEKFGGHGLLGVSKDIVH
Sbjct: 301 ERDYKEQLNALQREADCKEAKLVEDWCNKHSKLVKLVEKFGGHGLLGVSKDIVH 354

[Close]

BLAST of CsaV3_3G020410 vs. TrEMBL
Match: tr|A0A2P6S380|A0A2P6S380_ROSCH (Putative transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0163191 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.1e-104
Identity = 232/362 (64.09%), Postives = 263/362 (72.65%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRWQPEEDALLRAYVKQYGPKEW L+S RM  P++RDPKSCLERWKNYL+PGLKKG
Sbjct: 1   MKERQRWQPEEDALLRAYVKQYGPKEWALVSQRMAQPINRDPKSCLERWKNYLRPGLKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKAN----- 120
           SLSPEEQSLVI LQAKYGNKWKKIAAE+PGRTPKRLGKWWEVF+EKQLK  HK       
Sbjct: 61  SLSPEEQSLVIQLQAKYGNKWKKIAAELPGRTPKRLGKWWEVFREKQLK--HKPGCSXXX 120

Query: 121 -------------NLTQSSLDPNLPISLAVSSPEKALQGPYDHILETFAEKYVQPKLYPH 180
                                 ++P++  +SSPEKA QGPYDHILETFAEKYVQPKLY  
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXGSIPVAAGISSPEKAAQGPYDHILETFAEKYVQPKLY-- 180

Query: 181 PNSIPDADPLLSLGSVTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEP 240
              + + DPLLSLGS  +               XXXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 181 -GMMSEPDPLLSLGSAAATPSVLPPWMNPPSATXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 GCLESEVNRIGALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQQLESXXXXXXXXXXXXX 300
             ++     +G LVQ+CKEVEEGRQSWVQHKKEA+WRL+RLEQQLES             
Sbjct: 241 TRVQ-----MGTLVQWCKEVEEGRQSWVQHKKEATWRLSRLEQQLESEKARKRREAMEEI 300

Query: 301 XXXIQRLREEERVYLGGIERDYREQLNALRREADCKEAKLVEDWCNKHSKLAKLVEKFGG 345
              I+ LREEE  ++G IE DYREQ++ L+REA+ KEAKLVE WC+KH KLAKLV++ GG
Sbjct: 301 EAKIRALREEEMAFMGRIESDYREQMSVLQREAESKEAKLVEAWCSKHVKLAKLVDQIGG 352

[Close]

BLAST of CsaV3_3G020410 vs. TrEMBL
Match: tr|V4STI9|V4STI9_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10011915mg PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.8e-102
Identity = 251/393 (63.87%), Postives = 288/393 (73.28%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRWQPEEDA+L+AYVKQYGPKEWNLIS RM   L+RDPKSCLERWKNYLKPG+KKG
Sbjct: 1   MKERQRWQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SLSPEEQSLVISLQAKYGNKWKKIA+EVPGRT KRLGKWWEVFKEKQLKQLHK     + 
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWWEVFKEKQLKQLHKEKQRREY 120

Query: 121 S---LDPNLPI----SLAVSSPEKALQGPYDHILETFAEKYVQPKLYP------HPNSIP 180
           S    + N+P+    S + SSPEK  QG YDHILETFAEKYVQPKL+       + N +P
Sbjct: 121 SDQQQEGNVPVVGLGSGSCSSPEKVAQGRYDHILETFAEKYVQPKLFAMQALNLNLNPVP 180

Query: 181 -------------DADPLLSLGSVTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
                        D +P+LSLGS  +    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 ANAIMPNLPLGGADPEPVLSLGSGPT-WMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXEPGCLESEVN---------RIGALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQ 300
           XXXXXXEPG    ++N         ++G LVQYCKE+EEGRQSWVQHKKEA+WRL+RLEQ
Sbjct: 241 XXXXXXEPGIELGDMNPVARFMPGPQVGTLVQYCKELEEGRQSWVQHKKEATWRLSRLEQ 300

Query: 301 QLESXXXXXXXXXXXXXXXXIQRLREEERVYLGGIERDYREQLNALRREADCKEAKLVED 353
           QLES                I+ LREEE  +LG IE +Y+EQL+AL+R+A+ KEAKL+E 
Sbjct: 301 QLESEKARKRREKMDEIETKIRALREEELSHLGRIESEYKEQLSALQRDAESKEAKLMEA 360

[Close]

BLAST of CsaV3_3G020410 vs. TrEMBL
Match: tr|A0A2H5NUZ0|A0A2H5NUZ0_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_078470 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 2.3e-102
Identity = 249/393 (63.36%), Postives = 285/393 (72.52%), Query Frame = 0


Query: 1   MKDRQRWQPEEDALLRAYVKQYGPKEWNLISHRMPNPLHRDPKSCLERWKNYLKPGLKKG 60
           MK+RQRWQPEEDA+L+AYVKQYGPKEWNLIS RM   L+RDPKSCLERWKNYLKPG+KKG
Sbjct: 1   MKERQRWQPEEDAILKAYVKQYGPKEWNLISQRMGKTLNRDPKSCLERWKNYLKPGIKKG 60

Query: 61  SLSPEEQSLVISLQAKYGNKWKKIAAEVPGRTPKRLGKWWEVFKEKQLKQLHKANNLTQS 120
           SLSPEEQSLVISLQAKYGNKWKKIA+EVPGRT KRLGKWWEVFKEKQLKQLHK     + 
Sbjct: 61  SLSPEEQSLVISLQAKYGNKWKKIASEVPGRTAKRLGKWWEVFKEKQLKQLHKEKQRREY 120

Query: 121 S---LDPNLPI----SLAVSSPEKALQGPYDHILETFAEKYVQPKLYP------HPNSIP 180
           S    + N+P+    S + SSPEK  QG YDHILETFAEKYVQPKL+       + N +P
Sbjct: 121 SDQQQEGNVPVVGLGSGSCSSPEKVAQGRYDHILETFAEKYVQPKLFAMQALNLNLNPVP 180

Query: 181 -------------DADPLLSLGSVTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
                        D +P+LSLG   S      XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 ANAIMPNLPLGGADPEPVLSLG---SGPTWMNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXEPGCLESEVN---------RIGALVQYCKEVEEGRQSWVQHKKEASWRLNRLEQ 300
           XXXXXXEPG    ++N         ++G LVQYCKE+EEGRQSWVQHKKEA+WRL+RLEQ
Sbjct: 241 XXXXXXEPGIELGDMNPVARFMPGPQVGTLVQYCKELEEGRQSWVQHKKEATWRLSRLEQ 300

Query: 301 QLESXXXXXXXXXXXXXXXXIQRLREEERVYLGGIERDYREQLNALRREADCKEAKLVED 353
           QLES                I+ LREEE  +LG IE +Y+EQL+AL+R+A+ KEAKL+E 
Sbjct: 301 QLESEKARKRREKMDEIETKIRALREEELSHLGRIESEYKEQLSALQRDAESKEAKLMEA 360

The following BLAST results are available for this feature:

BLAST of CsaV3_3G020410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651362.1	4.5e-166	100.00	PREDICTED: transcription factor AS1-like [Cucumis sativus] >KGN57728.1 hypotheti...	[more]
XP_008461573.1	3.1e-151	93.79	PREDICTED: LOW QUALITY PROTEIN: transcription factor AS1-like [Cucumis melo]	[more]
XP_022935393.1	7.3e-124	76.72	protein rough sheath 2 homolog [Cucurbita moschata]	[more]
XP_023528710.1	1.6e-123	76.46	protein rough sheath 2 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022983442.1	8.3e-120	75.07	protein rough sheath 2 homolog [Cucurbita maxima]	[more]

BLAST of CsaV3_3G020410 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G37630.1	2.9e-66	45.87	myb-like HTH transcriptional regulator family protein	[more]
AT1G25340.1	2.2e-21	42.73	myb domain protein 116	[more]
AT5G52600.1	4.8e-21	44.23	myb domain protein 82	[more]
AT1G68320.1	2.4e-20	41.59	myb domain protein 62	[more]
AT3G46130.1	3.1e-20	41.35	myb domain protein 48	[more]

BLAST of CsaV3_3G020410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9S7B2\|RS2_MAIZE	3.8e-68	51.48	Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1	[more]
sp\|O80931\|AS1_ARATH	5.2e-65	45.87	Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1	[more]
sp\|Q94IB1\|RS2_ORYSJ	3.5e-53	57.62	Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 P...	[more]
sp\|Q9LTF7\|MYB82_ARATH	8.7e-20	44.23	Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1	[more]
sp\|Q9C9G7\|MYB62_ARATH	4.3e-19	41.59	Transcription factor MYB62 OS=Arabidopsis thaliana OX=3702 GN=MYB62 PE=2 SV=1	[more]

BLAST of CsaV3_3G020410 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L7E6\|A0A0A0L7E6_CUCSA	3.0e-166	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G264750 PE=4 SV=1	[more]
tr\|A0A1S3CEX4\|A0A1S3CEX4_CUCME	2.1e-151	93.79	LOW QUALITY PROTEIN: transcription factor AS1-like OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A2P6S380\|A0A2P6S380_ROSCH	1.1e-104	64.09	Putative transcription factor MYB-HB-like family OS=Rosa chinensis OX=74649 GN=R...	[more]
tr\|V4STI9\|V4STI9_9ROSI	1.8e-102	63.87	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10011915mg PE=4 ...	[more]
tr\|A0A2H5NUZ0\|A0A2H5NUZ0_CITUN	2.3e-102	63.36	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_078470 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010338	leaf formation
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0030154	cell differentiation
biological_process	GO:0006357	regulation of transcription from RNA polymerase II promoter
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000981	RNA polymerase II transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0001135	transcription factor activity, RNA polymerase II transcription factor recruiting
molecular_function	GO:0044212	transcription regulatory region DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G020410.1	CsaV3_3G020410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 253..295
None	No IPR available	COILS	Coil	Coil	coord: 301..321
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 1..59 e-value: 2.7E-18 score: 67.4
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 7..69 e-value: 3.6E-15 score: 55.8
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 62..121 e-value: 7.3E-11 score: 43.7
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 1..324
None	No IPR available	PANTHER	PTHR10641:SF658	SUBFAMILY NOT NAMED	coord: 1..324
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 3..55 e-value: 4.6E-15 score: 66.0 coord: 58..106 e-value: 8.5E-10 score: 48.6
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 63..104 e-value: 5.85332E-6 score: 42.1774
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 6..53 e-value: 1.53468E-9 score: 52.1926
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..57 score: 24.502
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 58..108 score: 17.684
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 4..99

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G020410	CSPI03G20450	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G020410	Cucsa.031620	Cucumber (Gy14) v1	cgycucB006
CsaV3_3G020410	CmaCh14G007970	Cucurbita maxima (Rimu)	cmacucB0281
CsaV3_3G020410	CmaCh01G003940	Cucurbita maxima (Rimu)	cmacucB0547
CsaV3_3G020410	CmoCh14G008130	Cucurbita moschata (Rifu)	cmocucB0272
CsaV3_3G020410	CmoCh01G004180	Cucurbita moschata (Rifu)	cmocucB0532
CsaV3_3G020410	Cp4.1LG02g17190	Cucurbita pepo (Zucchini)	cpecucB0686
CsaV3_3G020410	Cp4.1LG03g06350	Cucurbita pepo (Zucchini)	cpecucB0749
CsaV3_3G020410	CsGy3G020170	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G020410	Carg22284	Silver-seed gourd	carcucB0518
CsaV3_3G020410	Carg07487	Silver-seed gourd	carcucB0801
CsaV3_3G020410	Cla007114	Watermelon (97103) v1	cucwmB256
CsaV3_3G020410	MELO3C023770	Melon (DHL92) v3.5.1	cucmeB249
CsaV3_3G020410	ClCG05G012050	Watermelon (Charleston Gray)	cucwcgB241
CsaV3_3G020410	Lsi05G003990	Bottle gourd (USVL1VR-Ls)	cuclsiB231
CsaV3_3G020410	MELO3C023770.2	Melon (DHL92) v3.6.1	cucmedB235
CsaV3_3G020410	Cla97C05G093950	Watermelon (97103) v2	cucwmbB220
CsaV3_3G020410	Bhi01G001441	Wax gourd	cucwgoB274

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None