CsaV3_3G020080 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G020080
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionDEAD-box ATP-dependent RNA helicase
Locationchr3 : 15936882 .. 15947498 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATGTTTTTTTCTTCTCCACTCGAAATGCACGACCCCTCTCTCTTTCTCTCGAAACATCTCGTGCCTAAAACCCCTCTCTTCCTCTCCTTCACCCCATCACCAATAACCCTCTTCAGACGTCGGTTGACGACTCGTTCGTCGACAAAGGAACCCAATCTTTGACACCTCGAACACTGTCATTGCCACTGTGTCTCCATCTTCCAATTCATATTACAATAAATCTGGAAACGTTGCCTTTTGCATCAGCTACGAGTTGCCTCTCTAAAGCTTACCCTACAGCCGACGTGGGTCGTAGCTCGTCAGAGATCAAGTCAACCACTGTCTATCTCCATTCTTTATTCATATCCAACTCTTAGAGTGAAATTTCTTTGGTTCAGGGTTATCATTTTAGGTGTTTTGAATATCCATTAAGTTTAAACTTGAGTTTAACATTACCCATTACTTTTTATACTAGATTAGAGTCTTAGAAGAGTTTGAGTTGTTGTCTAGCCATTCGAAAGCTTGAATCTAGGCGTTTTGGCAGCACTTGGGTAAGGTTTTAAGCTTTTTAGAGTGGACATTGAGTACCTATCTAATCTTAGTGGTAGTATTGAGTAAATCATGGTGGTGGATGATTGATTTCAAACTTACAGTTAGGATGTTGGGATTTGAAGTTAAGAGTACTTTGCGAAGTTCTTGAAAGGTTTAAAGTAACTTTATTGGGTTTTTCCTAGAGTTCTTGAATGTCCACTAAGTTTAAGCATTAAAAATTGAATTATCCATGATATTTGGGTTCTAAAGTTGAGTGTTAGAGGTTGAAAATGAGTTTTTCATTAACTTGAAGTTCGTTTGAGTGTTACTTCTATAAAGTTCAAAACATAAAGTGATTTGGGTGATCTTAGAAAGTGTTTAAATTGTTTGACTCATGGTAATATATTGGGTATAAATCTCAAGCATCGTTGATAATGGAGATAAAAATGTATCTACATAAAAGACTCGTTGAATTTTGAAGTAAGTTGGATGCTCATGGGGATACTGGCTAAGTATCTAAATTTCGAGTCCAAGAGTTTGTATGTGAAAATTTTAGTCTAATCCTAGGCGCTTTGCAAACTCAAGGACCTTAGAAGCAGAAAATAGATTTAGGTGGCCTTATAAAATATTTTGCAAATAGTTGTAGCCTCATATCGTGTGAAGACAATGATGTGACCTTAATCCTTGTTTTAGGCCAAATTGAAGTGGGGAAAGCGTATAATCCCAAGGGATCGAGTTATTGACTGTAAGTGGCTTATTTTCAAGTATTTTTGTTATAAATCAACTAGTATGATTGTTTCTAGTATGAAAATTTCTAGCATAAATGTTTTATGATCCATGTGTTAGAAATGTTTTCAAATAAGATTTTTGGTTTTCCATGAATGCTTATATTTCGAAAATGTAGTTGAACCCAAATTTATTACTCATGTTTTTAGATGACAATTGGTTTAAAACAATACTCCTTGATCTGTTATTAAACTGGGATAATTTGAATAAAATGTGATTATAAAAGTATGTGTTGATGGCTAAAGATTGAAAATGTGTTTTTAAACATGTTTGGTTTTAAACTTTAAACATGTGATGTTTATGAAATAATGTTGGTGATTTTCTTAAAGGCTACATGAGTGTGTTTCTGTGGTGCCACATATGGTTGTTAGGAGGTTCCGAGGCTGAAAGAGGTCGTGGCAAAATCCGAGAACCTGAGCCTAGGTGAGAATATGGATGAAGGATTGTCATTTGGCTTCGGGCCTAGCTTAACCCATGATGGATGTCTCTATGTGCACATAGGAGCGGATATGAAGGTTGTTACTGTGATAGGTGCTAAGTATGCATGAGCTTAGTTTGGTTCCATATTTCCTTGTGGATATGGATCATGTGTGAGCTATTTTCGACTGTGTATTTAGGATGCTATCATGGTTGGATTGGATGGAGGTTGTTACTGTAGTAGGTGCTAAATATGTGTGAGTTCAATTTGGCCGTGTGTTTCCTTGTGAATATGGATCACATGTGATATATTATCAGTAGTATATTTCGTACGTTATCATGGTGGGATTAAATGGTGGTTGTTACTGTGGTAGGTGCTAAGTACGCGTGAGCTCAGTTTGACCACTTGTTTCCTTGTAGATATAGATCACGTGTGAGCTATTCTTGACGATGTATTTAGTATTCTACCATGGTCAGATTGGATGGAGGTTGCTATCATGACAGGTACTAAATATGCATGAACTAGGTTCGGCCGCATGATTCATTGATCATGTTCGAGCTATTTTTGGTTGTTTATATAGGCGCCTTGCCATGGTTGGATTGGGTACACATTTGTTGGCTTGACTTGTGATTTATTGTATTATGTGATGACAACGATTTAATTGTTATTTCATTATCGATGCATATTTACACATTTTTTGGGAGCATGTTTTACGAGCTTCGATTTCTAAAAACTTGCCACTCATTGAGATTTTAGCTCACGTTTTCAATATTCTTTTCCCCCTCTAGGTAGTGATAAGGACCAAGCATTGGTTGAACTCCTTGTCACCATTTATAGATCTTCATTTTTTATGTATATAGTTAACTTTTGTATAGCGAGAGTGACGCCTAGAACTCGTGTTTTGAAAGATCCTTCATCAGATTAAAATCATTTTGTATGTAATATCTAGTTTGAATTTTAACTCTAAATTCGTTTGGATGTGTGTGGTGAGACACACTTGTTGTGTCGTGTAATTTATATACATATACAAGTGAAAATTTCTTTCTTTTCAGGTTTGACTAACTCATATTTTAGGAGAGATGATGCCAAAATTTTCGTAGAATTTCATAATATGTATTCCATGAAAGTTTAAGTTGAAAAAAGTTATTTCAAATGTGTTTTTATGCCACGATCTAGATTAGAGAGGAAAACTTAGAACTACATGTGACAACTAAAACATTTATTTTAAAACTTTAGAAAGAAAATAAATAATAAACTCGAACTTGATGGACTAAAATTGGATTTTGACCTCTCTGTTATTATAAATGACCCATTTTAAATGTCGAAATTAGGGGTGTACAAATATGGGTTGAACCCGAATAACCTGGACTACCCAACCCATATTATACGGGTTGGGTTGGGTTAGGTTAAAATATGGGTTGGGTTGGGTTAAAAAAGATTGATTTTTTCGGGTTGGGTTGGGTCTTGGGTTGGAGAGTTGAAAAATTTTGTTCAACCCAACCCAACCCGAATTAATGTAATATATAAATAAATAAATATATTATTTTAATATAAAAACAAATTAAATGTATATAAATCTGAATGTATTGTATGAAAGTTTGAATGATGCATGTTTGAAATTTAAATGTAACAATTTCAAATTTTTATAATCATTAGAAATTAGAAATTAGAAAACGGGAAAAGAAAAATTAAAAAAATAATTATATATACAATCCGACAACCCAACTCAACCAGTAAAATATGGGTTGGATTGGGTTAGAAACTAAATTCGGGTTATTCGAGTTGCCAATCCAAATAACCTGAAAATATAGGTTGGGTTGGAAGATACAATCCAACCGATTTCACCCCTAGCGGAAATTACAAATGACCCATTCAAATGCTCCGTATTCAAGAACACATAAGTTATACTATTACCCAGTGATCTGGGGTTTCTTCTTATTCTCTTTTCTCCAGGTGCAGCACCGTCTTCCTCTTCCGCTTCCTCGTCTTCCGTCTTCACGCATGCGAGCTCCTTCTCTCTGACTTCCTCTTCTTCTCCAACACAACGTTCATGGGCGTGAGGCTTTGTCCCCTACTTCTTCTTCAGGGGAGTGAGAGCTGGGTGATGGGAGTCTTGCGCGAGACCGAGAGAGCAAGAGCACAAAGAGCGAGCCCATGAGATGGAAAAGATCTTGAGTGATTTTGAGAGAGCGAGAGCATGAGAGCGAGAATTAGGCGACAACGAATTAACAGCTCGACTCTTTAAATTTGTGTGGAGGTTGTTTATTTATTTTGCAGGAACTAATGTGAATACTTGACTCCAAGCATAATAATATTGAATTCGTAGTCATGGATAATGGAAACAAGGACTGTGTGCCCGAAGCACTCTCAAAATTGGTAGATGCTGATGATTCTGGAGGTAAGAGGGGTTTATTTATTTATTTTTATTTTCTTCGTTCTGTTCTGTGAGATACATGAACATGTGTGTTTATACTTCGTCGTTACCTCCATACGTACTATTTGATGTTTTTTATGCTTAATTGGTTGATTCTTATTAGGTTCCTTATGTTTGTATTCCTTTGTTCAAGCCCCCATATAGTTTTTTATTCTTGTTTTTAGAATACTCGTCAATATTGCTGCTGACCTGATATTTGCGTGGTTAATTATTGATATTATTTCAGATTTAGGATTAAGTCTTCTCAATGCATTGATATTGGCAGAATATGGCTACTGTAAAACTGTCATGGTAGTCAGGATAGTTTACTATGATGCTAGCTGACTGAAATAGCATAGTAGTAGGGAAGTTACCATGTCCATGGGAATTGTTCTACAATGTTTGCTGCTCTAGGATTAATTTTTTTCTTTTATTTTGAGCTGAAAGAAAAGTTGGCTCAAGTTTATAATTATTGTACAGGTCGCACTTAAAATGGTTAATTTGTCTGTAAATACGAAGGAAAAATTCTTTGGTATCTGATGGGGGGAACAAGTTATTATTTATTTATTATTTTTTTTTGATAAAGAGAGAAATGCTTCATTAAGAATAATGAATAATGAAAAAATCTACCTAAACCAACCCTGGAAAAAACCCCATTACAAGGAAGGATCCCAACTAATAGAAATCAAACTCAAAGAGTAGTTACAAAAAAGCTTTGAGATCGAAGCCCAAAGCAAGATATAATGACGAAGGAGGGACCAAAGCTCTATAGAATCCCTCTCCATGCCCCCAAAAGTTCTATTGTTTCATTTCCTCCACAAGCTCCATAAAATCATACGAGTACTGGCACTCCAAAGAAACCTGGCTTTCTCTTTCACAAGTGGGTTGAGAAGGTAATACTCGATCATGTCTCTAACACCTCTAGGACGAGTACTCACTCTACCAAGGCGAAAAAGATAATTCTCTAACAGAGAGAGGAGGGAAGCCACATTTAACGATTCCCTATCAGTAAGAGAACGTCAAAAAGCAAAAAAAAAAAAAAAGTGATTGAACTCCCCTACCAAACCAAGAAATCGACAATGAAATGATTTTTGAGGGAGGAGAGATGGTAAAGACAAGGAAATAAAGCACAAAGAGGTCTATACCCAACCCAGAAATCCTCCCAAAAGTAGGTCTCTCTCCCCTCCCTCACCACCCAACGAACCAAGTTAGCAAAACTAGGAAGATCCTTCACAATGTCTTTCCATAAATTCCAGTAAGTACCTCTAATCACTTTAGACAACCACTCAAAAGTGTGGAGACCAAATTTACTCACAATGATTTTTTGCCACAGAGAGTCAGGTTCAGAGTTAAAACGCCAGAACCATTTAGCTAAGGGGGTTTATTGTGAAGACTAAGGTTTCCAATTTCCAATCCACCTGAACCAATCGATTTTTCAATTATCTTCCATTTTATCAGATGAGAGCCCTTGCCTTTCCTTTCAGCTTTATTTTTTAATATAAGTCCCAATTAGGATTATGGTGTCCACCACAACTAAATTACTTACTTTGAATTCATAGACTTCGGAGTTCCTGGCAGCAATTGCTTTGTAAATCTGAATGAGGAGATTGTTATTTCTTATGGAAATTAATTATTCTTCTGTCATATCTTCAGCTTCTATGTTCCAGGTAGTGGAGTTGGGTTTAGAAACTGGTTCTAGAGTTTGTCTATGGAGTTAATTTTGTGGTAACTACCCTATAGTTTAGTTTTTCTAAATGGTTGAAAGGAAGCTCATAAGTCCATTGCATCGTCCTTGATCCACTTAGAATAAAATAGATATCTAAATGTCTAATTGAGCACACCTACGCTAGCTTAATGGTAATTATGGCCAGGATTTTGAACGGCCATCACAAGGGATCTTGAAATGAATCCTTTCTTACAAAAAGAAGAACAATCATGAATAGTTGCTAGTATACAGCAATTTTCCCAGCAAAGGTTCTTATAATGGTTGGATCCTATTTTTGGCTTAGGACGGTGGAGGAGTGGCTTTTCAAAGCTCCTTCAGGTTTGTGTTTGAAAGGAAAGGAAAAAATAGTTTGGGGTTGTGCGGCTAGACACTTCTTTTGGCTTCTCTGGAGTTGGTACTCCAGCCATTTTCTTCAATCAGTCTTTTAATTGGGTTATTGTAGATTGGAAATTTGGAAGGTCATTCTTTTGTGCCTGTATTGGAGGCCCCTAGCCCCTAGCCCCTAGCCTTCTATTCTTCCTTTTTGAATCTATATCAGTTTCTAATTTTAAAACAATTAATTTTTCGTGTACTGGTTATCAACATTCAAGACAAAGAGGGGGTGTAAGGCTAGATCATAGAGGAACACTTTAAATTCTTTCAACATCAGCCAAGGAGGCGTTAACTTTAATATTGGTACCCATTTCTTTAGAGGGAACCAGAATTCTTCGTTCTCTTACCATAGAATCCAGCTTCGCTATTTCGGAAATACCTTCTTTGTTTGAGTTTATTTTTCTCCATCTAATGGACATAATCAATGCCTTTTTATATTTTTTTCCAAAATTTACTTTTTCAAAGAGTCATAGACATAACCAACACCTCTTGAAACTCCAAAAGTTTATGGGTGAGAAGGATGCCAGTTTGGTTGCTAAAGCGACTAGCTGACCAAGAAAGGGAGCCCTGTTGGAGAGATGGAGTGTGGGTAGTATTTTTCCAATCTTACTACTTTTAACTGCACAGTGGAATTAATCTTCATGGCTATCTTAGCCTTTTAAAATTTATACTGTCAATGAAATTCAGTTGGCTTGTCTCATAAAAAACAATAATGATAATACCTCCAACAGCCAAATTTCAGACAAAAATTGTCCCTTTTTTAGGAATTTAATCCAATGACTTAATTCAACTCATTTCTATGATGGGCTATTGATCTTTTATCTCTAATAAATATGAAAAAAAGAATGTTGAAAAGATTCAAAAGGTTCTCCGTTCCCATTGATAGGGTTACAACCTTATAGGATGGATATGGAAAATCATTTACTTGGACAAGTTCTCCATAAAGGTCACATATTCTGATAATGCTCCGAATGAACCACCTACCTGCAGTTTGTACTCAGCTGCAGAACTCTTCCGCATGATCTGCGCATTGCTGCGATGAACCTCTCGATTCCCAGTCTTGCACGCAAGTACAAAGTCTTTGCTCTGATCCCAAAGATGGTGAAACCTTCTTTGCTACTATTCTGATGATTTTAGTTGAGGTCTTCTTAATGCATTAAGGTTGGCAGCATTTATTACTGCCTCTATTATTTTATTGTCATATTTGGTTTGTTACACTAAACAACTGAAACAAGAGATCATTTAAAATGAAAGGACAGCAGAAAAATTGTTCTTTATCTTTTGGGATTTTACTACATTGGTTGTACCAGTGATTTATTTGTTCTTTTTGGTAACTGTCATATGCTTGATGAATGATCTAGATTTTTTATTTTTGTAATCGTCTTTTAACTCTTGTTTTTAATGTAGAATCTCCTGTTAAAGTGAAATGTATCGAGCAGAGAGAGGCTTTTCCTGGAGAACCTAAATGTGTTGTATGTGGTCGTTATGGTGAATACATATGTGATGAGACAGATGATGATGTTTGCAGCATGGAATGTAAACAATCAGTTCTACGCAAAGTGGCAAATACAATGGCTCCAGATAAGGCGCCATCTAAAAGACTTCCTGCTGCCGACGAGTGCTTTTATGTTAAGGAATCTAATTATTCAGGTTCTTTGACTTGTGAGCAGACTGAGATGCTTAGGAAAAAACTTGGAATCAGTATAAAGGGAGACTTAGATTGTGCTCCTATATTGTCATTTTCTTTTGGCAACCTCCCTCAGAAGCTATTCCAGAATCTAGAGACTGCAGGCTATGAGATGCCCACACCTGTTCAGATGCAAGCTATACCAGCTGCTTGTTTGGGTAAAAATCTGCTTGTTTCGGCTGAGACTGGCTCTGGAAAGACTGTGTCCTATCTGGTTCCAATAGTTTCCTACTGTGCACGTGCTTGTCTTGAGTGTTTCCATGGTGAAAAGAAGCCACTAGCTATGGTTCTAACACCTACTAGAGAGCTTTGCATTCAAGTTGAACAACAAGCGAAGTTGCTTGGAAAAGGCATGCCATTTAAAACTGCCCTTGTTGTTGGTGGTGATGCCCTAGCTGGACAGCTCCATCGTATCCAGCAAGGAGTTGAGCTGATTGTTGCTACTCCTGGCAGGTTGGTTGATCTTTTGACAAAGCATGATATTGAACTTGATGAAGTGAGGACTTTTGTTCTGGATGAAGTGGATTGCTTACTCCAAAAAGGCTTTCGTGATCAGGTATTACAGATTTTCAGGGCTCTTTCAGTACCACAAATCTTAATGTATACAGCAACTCCCTCTCCAGAAGTAGAGAAGATGGCAAAATCTATGGGAGATGGCACCGTTATCATATCTACTAGCATGTCAAATAAACCAACCAAGGCTTTGAAGCAGGTTGTTATCTGGGTAGAATCAAAGAATAAGAAACAAAAGCTTTTTGACATATTAACAAGTAAGCAACATTTTATGCCCCCTCTTGTAGTGTATGTAGGCTCAAGGCTTGGAGCCGATCTCCTTTCTAATGCAATTACTGTTACCACTGGGATAAATGCATTGTCAATTCACGGGCACAAGTCCATGAAGGAGAGACGAGAAGCCATGAGATCATTTATTATGGGAGAAGTTCAAGTGATGGTGGCTACTGGGATTTTGGGTCGAGGGATGGATCTTTTGTGTGTGAGGCAAGTGATTATATTTGACATGCCAAATTCAATCAAGGAGTATGTACATCAGATTGGGCGGGCATCTAGACTTGGAGAGGAGGGCAAAGCCATAGTGTTTGTGAATGAGGAAAATAAGAATTTATTTCAAGATTTAGTGGAGACTTTGAAGTCTTCTGGAGCACCTATACCTCGAGAACTTCTGAATTCACATCATACAGCAAATTCTTCGTACAGGGCTAAAAACCAGAAGAAACGGAAGTATTCTTAGACATAAATCCGTGGAAAATTTACTATATCAACTTTAACGAATTTACTATCAGTCTTATTAAACCTGTGAGAAGGCATTGGAGTTTTGATATGATATGTAAATGCCTTGTGGTCTGCTGGCAGAATGAGGTGCTTGGTATTTGAAGCTTCCTAAGGATCTAGCTTTTGAAGGTAAACAATGCACTAATCTCAGAGTAATTTAGAGTAATATTGAAATTGTTAAAATATATATTTTTTAAGTTTAATATGTTTTTGGTCACTCAAAATTAATTTAATATTTAACTTTGTGGTTTTGATTTAATCAAAACCCTGTTTTAATGTGATTTTGAAAATGGCAAAAGTCATTTTAACCATGTTTAAATCACTCTGACATATTCTAAATTTTGAACTTCAACTAGGTGTAATGTATGCCCAAGTATTACTGAGAAAAGAATGAACACTTTTTGTTCTTCCACAACTAAGAAGGGGCCTGCACCAACCCTGGTACGCTTCAAAAAAAGTCTTGGATGAGATGGATGCATGTTTCAACTTGGAAAGGTAATCAAAGCGATTATGAATATATCTTACCCACACTAAGAAATTTCTAGTACTATTATAGTATTAAATTCATTATTTGTCATGAAAGAAGCATTTAAGAATGGTATGAAGCACATAAATATGACGTGTCAAGTGTTGAATTGGAGGAGTATGTAACAGTAATTTTCGAACAACCTGAACTTACCATCTCATTAACATTTACAATGCAAGTTTGTGGAATCCGAAGAATGGGTGAATTTTATTTTGTACTGTTAGAAGCTGAAAGGAGGGAGTACTCCAAATGATAGATGCTTGAGGCAAGGGATGATGAGCAAACATATTGAAAAAGCGACTTTAATCGAATTATGGATCCAAAACTTTGCCTCTGGTGGATTGTGAAAGTGTGAAGGTCGATGGATGCTTCAATTGTTTGCATAAATGTACTTGAATATTTTGGTTGAGTAACTGGTAGTAGTCATCTTCAATTCTTTACCCAAGAAGAGGAACCTTCTAAAATAATTGATTAAAATCAGTTCTGGTAGGGGCTTTTATTCTTGCTAATAAAGAAAGCAAAGTGGTGTTATAAATAGGATAATAATTAAGTATATAATAATATTTTAAAAAAATTCCAAATATAGTAAAGTCTATCAGTAATAGATTTCTATAATGACTAAACTTTTATTGTTTATCAGTTATAGATTAATATTTGCAATAAGAAATAGATTTTAACAAATTTTGCTATATTTGTATATTTTTTTTTAATGTTACTATATATTTAATTATTTTGAATATAATTGCTATATTTGCAACTATTTGTAATGAATATTATGTTGACATTCTTTTTATTGTATATATTTTAGTTTGATGCAAGGGTTTGTACAAGTTTGTTGGAGAAACAAATTTTGCTATGTATTTTGATTTCTATAACTTGATTTGTTG

mRNA sequence

ATGGATAATGGAAACAAGGACTGTGTGCCCGAAGCACTCTCAAAATTGGTAGATGCTGATGATTCTGGAGAATCTCCTGTTAAAGTGAAATGTATCGAGCAGAGAGAGGCTTTTCCTGGAGAACCTAAATGTGTTGTATGTGGTCGTTATGGTGAATACATATGTGATGAGACAGATGATGATGTTTGCAGCATGGAATGTAAACAATCAGTTCTACGCAAAGTGGCAAATACAATGGCTCCAGATAAGGCGCCATCTAAAAGACTTCCTGCTGCCGACGAGTGCTTTTATGTTAAGGAATCTAATTATTCAGGTTCTTTGACTTGTGAGCAGACTGAGATGCTTAGGAAAAAACTTGGAATCAGTATAAAGGGAGACTTAGATTGTGCTCCTATATTGTCATTTTCTTTTGGCAACCTCCCTCAGAAGCTATTCCAGAATCTAGAGACTGCAGGCTATGAGATGCCCACACCTGTTCAGATGCAAGCTATACCAGCTGCTTGTTTGGGTAAAAATCTGCTTGTTTCGGCTGAGACTGGCTCTGGAAAGACTGTGTCCTATCTGGTTCCAATAGTTTCCTACTGTGCACGTGCTTGTCTTGAGTGTTTCCATGGTGAAAAGAAGCCACTAGCTATGGTTCTAACACCTACTAGAGAGCTTTGCATTCAAGTTGAACAACAAGCGAAGTTGCTTGGAAAAGGCATGCCATTTAAAACTGCCCTTGTTGTTGGTGGTGATGCCCTAGCTGGACAGCTCCATCGTATCCAGCAAGGAGTTGAGCTGATTGTTGCTACTCCTGGCAGGTTGGTTGATCTTTTGACAAAGCATGATATTGAACTTGATGAAGTGAGGACTTTTGTTCTGGATGAAGTGGATTGCTTACTCCAAAAAGGCTTTCGTGATCAGGTATTACAGATTTTCAGGGCTCTTTCAGTACCACAAATCTTAATGTATACAGCAACTCCCTCTCCAGAAGTAGAGAAGATGGCAAAATCTATGGGAGATGGCACCGTTATCATATCTACTAGCATGTCAAATAAACCAACCAAGGCTTTGAAGCAGGTTGTTATCTGGGTAGAATCAAAGAATAAGAAACAAAAGCTTTTTGACATATTAACAAGTAAGCAACATTTTATGCCCCCTCTTGTAGTGTATGTAGGCTCAAGGCTTGGAGCCGATCTCCTTTCTAATGCAATTACTGTTACCACTGGGATAAATGCATTGTCAATTCACGGGCACAAGTCCATGAAGGAGAGACGAGAAGCCATGAGATCATTTATTATGGGAGAAGTTCAAGTGATGGTGGCTACTGGGATTTTGGGTCGAGGGATGGATCTTTTGTGTGTGAGGCAAGTGATTATATTTGACATGCCAAATTCAATCAAGGAGTATGTACATCAGATTGGGCGGGCATCTAGACTTGGAGAGGAGGGCAAAGCCATAGTGTTTGTGAATGAGGAAAATAAGAATTTATTTCAAGATTTAGTGGAGACTTTGAAGTCTTCTGGAGCACCTATACCTCGAGAACTTCTGAATTCACATCATACAGCAAATTCTTCGTACAGGGCTAAAAACCAGAAGAAACGGAAGTATTCTTAG

Coding sequence (CDS)

ATGGATAATGGAAACAAGGACTGTGTGCCCGAAGCACTCTCAAAATTGGTAGATGCTGATGATTCTGGAGAATCTCCTGTTAAAGTGAAATGTATCGAGCAGAGAGAGGCTTTTCCTGGAGAACCTAAATGTGTTGTATGTGGTCGTTATGGTGAATACATATGTGATGAGACAGATGATGATGTTTGCAGCATGGAATGTAAACAATCAGTTCTACGCAAAGTGGCAAATACAATGGCTCCAGATAAGGCGCCATCTAAAAGACTTCCTGCTGCCGACGAGTGCTTTTATGTTAAGGAATCTAATTATTCAGGTTCTTTGACTTGTGAGCAGACTGAGATGCTTAGGAAAAAACTTGGAATCAGTATAAAGGGAGACTTAGATTGTGCTCCTATATTGTCATTTTCTTTTGGCAACCTCCCTCAGAAGCTATTCCAGAATCTAGAGACTGCAGGCTATGAGATGCCCACACCTGTTCAGATGCAAGCTATACCAGCTGCTTGTTTGGGTAAAAATCTGCTTGTTTCGGCTGAGACTGGCTCTGGAAAGACTGTGTCCTATCTGGTTCCAATAGTTTCCTACTGTGCACGTGCTTGTCTTGAGTGTTTCCATGGTGAAAAGAAGCCACTAGCTATGGTTCTAACACCTACTAGAGAGCTTTGCATTCAAGTTGAACAACAAGCGAAGTTGCTTGGAAAAGGCATGCCATTTAAAACTGCCCTTGTTGTTGGTGGTGATGCCCTAGCTGGACAGCTCCATCGTATCCAGCAAGGAGTTGAGCTGATTGTTGCTACTCCTGGCAGGTTGGTTGATCTTTTGACAAAGCATGATATTGAACTTGATGAAGTGAGGACTTTTGTTCTGGATGAAGTGGATTGCTTACTCCAAAAAGGCTTTCGTGATCAGGTATTACAGATTTTCAGGGCTCTTTCAGTACCACAAATCTTAATGTATACAGCAACTCCCTCTCCAGAAGTAGAGAAGATGGCAAAATCTATGGGAGATGGCACCGTTATCATATCTACTAGCATGTCAAATAAACCAACCAAGGCTTTGAAGCAGGTTGTTATCTGGGTAGAATCAAAGAATAAGAAACAAAAGCTTTTTGACATATTAACAAGTAAGCAACATTTTATGCCCCCTCTTGTAGTGTATGTAGGCTCAAGGCTTGGAGCCGATCTCCTTTCTAATGCAATTACTGTTACCACTGGGATAAATGCATTGTCAATTCACGGGCACAAGTCCATGAAGGAGAGACGAGAAGCCATGAGATCATTTATTATGGGAGAAGTTCAAGTGATGGTGGCTACTGGGATTTTGGGTCGAGGGATGGATCTTTTGTGTGTGAGGCAAGTGATTATATTTGACATGCCAAATTCAATCAAGGAGTATGTACATCAGATTGGGCGGGCATCTAGACTTGGAGAGGAGGGCAAAGCCATAGTGTTTGTGAATGAGGAAAATAAGAATTTATTTCAAGATTTAGTGGAGACTTTGAAGTCTTCTGGAGCACCTATACCTCGAGAACTTCTGAATTCACATCATACAGCAAATTCTTCGTACAGGGCTAAAAACCAGAAGAAACGGAAGTATTCTTAG

Protein sequence

MDNGNKDCVPEALSKLVDADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDDDVCSMECKQSVLRKVANTMAPDKAPSKRLPAADECFYVKESNYSGSLTCEQTEMLRKKLGISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETGSGKTVSYLVPIVSYCARACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKTALVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKGFRDQVLQIFRALSVPQILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVVIWVESKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKERREAMRSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEGKAIVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKYS
BLAST of CsaV3_3G020080 vs. NCBI nr
Match: XP_004145645.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 41 [Cucumis sativus] >XP_011651335.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 41 [Cucumis sativus] >KGN57687.1 hypothetical protein Csa_3G252460 [Cucumis sativus])

HSP 1 Score: 1054.3 bits (2725), Expect = 1.4e-304
Identity = 532/532 (100.00%), Postives = 532/532 (100.00%), Query Frame = 0

Query: 1   MDNGNKDCVPEALSKLVDADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDD 60
           MDNGNKDCVPEALSKLVDADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDD
Sbjct: 1   MDNGNKDCVPEALSKLVDADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDD 60

Query: 61  DVCSMECKQSVLRKVANTMAPDKAPSKRLPAADECFYVKESNYSGSLTCEQTEMLRKKLG 120
           DVCSMECKQSVLRKVANTMAPDKAPSKRLPAADECFYVKESNYSGSLTCEQTEMLRKKLG
Sbjct: 61  DVCSMECKQSVLRKVANTMAPDKAPSKRLPAADECFYVKESNYSGSLTCEQTEMLRKKLG 120

Query: 121 ISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETG 180
           ISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETG
Sbjct: 121 ISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETG 180

Query: 181 SGKTVSYLVPIVSYCARACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKTA 240
           SGKTVSYLVPIVSYCARACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKTA
Sbjct: 181 SGKTVSYLVPIVSYCARACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKTA 240

Query: 241 LVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKGFR 300
           LVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKGFR
Sbjct: 241 LVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKGFR 300

Query: 301 DQVLQIFRALSVPQILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVVIWVE 360
           DQVLQIFRALSVPQILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVVIWVE
Sbjct: 301 DQVLQIFRALSVPQILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVVIWVE 360

Query: 361 SKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKERR 420
           SKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKERR
Sbjct: 361 SKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKERR 420

Query: 421 EAMRSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEGKA 480
           EAMRSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEGKA
Sbjct: 421 EAMRSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEGKA 480

Query: 481 IVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKYS 533
           IVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKYS
Sbjct: 481 IVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKYS 532

BLAST of CsaV3_3G020080 vs. NCBI nr
Match: XP_016900847.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 41 [Cucumis melo])

HSP 1 Score: 994.6 bits (2570), Expect = 1.3e-286
Identity = 509/533 (95.50%), Postives = 516/533 (96.81%), Query Frame = 0

Query: 1   MDNGNKDCVPEALSKLVDADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDD 60
           MDNGNKDCVPEALSK  D DDSGES VKVKC EQREAFPGEPKCVVCGRYGEYICDETDD
Sbjct: 1   MDNGNKDCVPEALSKSAD-DDSGESAVKVKCNEQREAFPGEPKCVVCGRYGEYICDETDD 60

Query: 61  DVCSMECKQSVLRKVANTMAPDKAPSKRLPAADECFYVKESNYSG-SLTCEQTEMLRKKL 120
           DVCSMECKQSVL KVAN+MAPDK PSKRLPAADECFYVKESNYSG SLTCEQTEMLRKKL
Sbjct: 61  DVCSMECKQSVLCKVANSMAPDKPPSKRLPAADECFYVKESNYSGSSLTCEQTEMLRKKL 120

Query: 121 GISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAET 180
           GISIKGDLDCAPILSFSFG+LP+KL QNLETAGYEMPTPVQMQAIPAACLGKNLLVSAET
Sbjct: 121 GISIKGDLDCAPILSFSFGDLPEKLLQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAET 180

Query: 181 GSGKTVSYLVPIVSYCARACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKT 240
           GSGKT+SYLVPIVSYC RA LECF GEKKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKT
Sbjct: 181 GSGKTMSYLVPIVSYCTRARLECFRGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKT 240

Query: 241 ALVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKGF 300
           ALVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDE+RTFVLDEVDCLLQKGF
Sbjct: 241 ALVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEMRTFVLDEVDCLLQKGF 300

Query: 301 RDQVLQIFRALSVPQILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVVIWV 360
           RDQVLQIFRALS PQILMYTAT SPEVEKMAKSMGDGTVI+STSMSNKPTKALKQVVIWV
Sbjct: 301 RDQVLQIFRALSGPQILMYTATTSPEVEKMAKSMGDGTVIMSTSMSNKPTKALKQVVIWV 360

Query: 361 ESKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKER 420
           ESKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGI ALSIHGHKSMKER
Sbjct: 361 ESKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGIKALSIHGHKSMKER 420

Query: 421 REAMRSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEGK 480
           REAM+SFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLG EGK
Sbjct: 421 REAMKSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGGEGK 480

Query: 481 AIVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKYS 533
           AIVFVN ENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKYS
Sbjct: 481 AIVFVNGENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKYS 532

BLAST of CsaV3_3G020080 vs. NCBI nr
Match: XP_022148242.1 (DEAD-box ATP-dependent RNA helicase 41 [Momordica charantia] >XP_022148243.1 DEAD-box ATP-dependent RNA helicase 41 [Momordica charantia])

HSP 1 Score: 899.0 bits (2322), Expect = 7.5e-258
Identity = 455/534 (85.21%), Postives = 492/534 (92.13%), Query Frame = 0

Query: 1   MDNGNKDCVPEALSKLVDADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDD 60
           M+N N++ V EA +K  DAD+SGES VKVKC +QREA PGEPKCVVCGRYGEYICDETDD
Sbjct: 1   MENDNRNGVSEASTKSTDADNSGESGVKVKCKDQREALPGEPKCVVCGRYGEYICDETDD 60

Query: 61  DVCSMECKQSVLRKVANTMAPDKAPSKRLPAADECFYVKESNY--SGSLTCEQTEMLRKK 120
           D+CSMECK+SVLR+V+N + PD    +RLPAADECFYV +SN   S SLT EQTE+LR+K
Sbjct: 61  DICSMECKESVLRRVSNALPPDLPSPRRLPAADECFYVNDSNQLGSSSLTSEQTELLRRK 120

Query: 121 LGISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAE 180
           LGIS+KGDLDCAPILSFS  +LPQKL QNLETAGYEMPT VQMQAIPAAC GKNLLVSAE
Sbjct: 121 LGISVKGDLDCAPILSFSCCDLPQKLLQNLETAGYEMPTAVQMQAIPAACSGKNLLVSAE 180

Query: 181 TGSGKTVSYLVPIVSYCARACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMPFK 240
           TGSGKTVSYLVPIVSYCAR  +ECFHG+KKPLAMVLTPTRELCIQVE+QAKLLGKGMPFK
Sbjct: 181 TGSGKTVSYLVPIVSYCARVRIECFHGQKKPLAMVLTPTRELCIQVEEQAKLLGKGMPFK 240

Query: 241 TALVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKG 300
           TALVVGGDALAGQLHR+QQGVELIVATPGRLVDLL KHDIELDEVRTFVLDEVDCLLQKG
Sbjct: 241 TALVVGGDALAGQLHRVQQGVELIVATPGRLVDLLMKHDIELDEVRTFVLDEVDCLLQKG 300

Query: 301 FRDQVLQIFRALSVPQILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVVIW 360
           FRDQVLQIFRALS PQ+LMY+AT S EVEKMA+SMGDG VIIS  +SN+PTKALKQ+VIW
Sbjct: 301 FRDQVLQIFRALSRPQLLMYSATTSFEVEKMARSMGDGAVIISAGISNRPTKALKQLVIW 360

Query: 361 VESKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKE 420
           VESKNKKQKLFDIL SKQHFMPP+VVYVGSRLGADLLSNAITVTTGI ALSIHGHKSMKE
Sbjct: 361 VESKNKKQKLFDILASKQHFMPPVVVYVGSRLGADLLSNAITVTTGIKALSIHGHKSMKE 420

Query: 421 RREAMRSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEG 480
           RREAM+ F++GEVQVMVATGILGRGMDLLCVRQVI+FDMPNSIKEYVHQIGRASRLGEEG
Sbjct: 421 RREAMKLFLVGEVQVMVATGILGRGMDLLCVRQVIVFDMPNSIKEYVHQIGRASRLGEEG 480

Query: 481 KAIVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKYS 533
           KAIVFVN E+KNLF+DLVE LKSSGAPIPRELLNSH+TANS + AKNQKKRK+S
Sbjct: 481 KAIVFVNGEDKNLFKDLVEILKSSGAPIPRELLNSHYTANSLHAAKNQKKRKHS 534

BLAST of CsaV3_3G020080 vs. NCBI nr
Match: XP_023529324.1 (DEAD-box ATP-dependent RNA helicase 41 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 893.3 bits (2307), Expect = 4.1e-256
Identity = 456/536 (85.07%), Postives = 490/536 (91.42%), Query Frame = 0

Query: 1   MDNGNKDCVPEALSKLVDADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDD 60
           M+NGNKD VP++LSK +D D+SGES VKVKC +QREA PGEPKCVVCGRYGEYICDETDD
Sbjct: 1   MENGNKDYVPQSLSKAIDTDESGESAVKVKCKDQREALPGEPKCVVCGRYGEYICDETDD 60

Query: 61  DVCSMECKQSVLRKVANTMAP--DKAPSKRLPAADECFYVKESNYSG--SLTCEQTEMLR 120
           D+CSMECKQSVL K+AN  A   D  P K+LPAADECFYVK+SN SG  SLTCEQTE+LR
Sbjct: 61  DICSMECKQSVLCKMANRNALPFDFPPPKKLPAADECFYVKDSNCSGSSSLTCEQTELLR 120

Query: 121 KKLGISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVS 180
           +KLGI IKGD+ CAP LSFS  NLPQKL QNLETAGYEMPT VQMQAIPAACLGKNLLVS
Sbjct: 121 RKLGIVIKGDIGCAPTLSFSSCNLPQKLLQNLETAGYEMPTAVQMQAIPAACLGKNLLVS 180

Query: 181 AETGSGKTVSYLVPIVSYCARACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMP 240
           AETGSGKTVSYLVPIVSYCAR  LE FHGEKKPLAMVLTPTRELCIQVE+QAKLLGKGMP
Sbjct: 181 AETGSGKTVSYLVPIVSYCARVRLENFHGEKKPLAMVLTPTRELCIQVEEQAKLLGKGMP 240

Query: 241 FKTALVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQ 300
           FKTALVVGGDALAGQ++RI+QGVELIVATPGRLVDLL KHDIE DE++TFVLDEVDCLLQ
Sbjct: 241 FKTALVVGGDALAGQVYRIEQGVELIVATPGRLVDLLMKHDIEFDELKTFVLDEVDCLLQ 300

Query: 301 KGFRDQVLQIFRALSVPQILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVV 360
           KGFRDQVLQIF ALS PQILMY+AT SPEVEKMA++MGDGTVII+  MSNKPTKALKQ+V
Sbjct: 301 KGFRDQVLQIFTALSRPQILMYSATTSPEVEKMARTMGDGTVIITAGMSNKPTKALKQLV 360

Query: 361 IWVESKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSM 420
           IWVESKNKKQKLFDIL SKQHFMPPLVVYVGSRLGADLLSNAITVTTGI ALSIHGHKSM
Sbjct: 361 IWVESKNKKQKLFDILASKQHFMPPLVVYVGSRLGADLLSNAITVTTGIKALSIHGHKSM 420

Query: 421 KERREAMRSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGE 480
           KERREAM+SF++G+VQVMVATGILGRGMDLL VRQVI+FDMPNSIKEYVHQIGRASRLGE
Sbjct: 421 KERREAMKSFLVGDVQVMVATGILGRGMDLLRVRQVIVFDMPNSIKEYVHQIGRASRLGE 480

Query: 481 EGKAIVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKYS 533
           EGKAIVFVN EN NLFQDLVE LKSSGAPIPREL NSH+  NSS+ A+N +KRKY+
Sbjct: 481 EGKAIVFVNGENTNLFQDLVEILKSSGAPIPRELSNSHYAVNSSHTARNGRKRKYT 536

BLAST of CsaV3_3G020080 vs. NCBI nr
Match: XP_022989622.1 (DEAD-box ATP-dependent RNA helicase 41 [Cucurbita maxima] >XP_022989624.1 DEAD-box ATP-dependent RNA helicase 41 [Cucurbita maxima] >XP_022989625.1 DEAD-box ATP-dependent RNA helicase 41 [Cucurbita maxima] >XP_022989626.1 DEAD-box ATP-dependent RNA helicase 41 [Cucurbita maxima])

HSP 1 Score: 891.0 bits (2301), Expect = 2.0e-255
Identity = 455/536 (84.89%), Postives = 488/536 (91.04%), Query Frame = 0

Query: 1   MDNGNKDCVPEALSKLVDADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDD 60
           M+NGNKD VP++LSK  D D+SGES VKVKC +QREA PGEPKCVVCGRYGEYICDETDD
Sbjct: 1   MENGNKDYVPQSLSKATDTDESGESAVKVKCKDQREALPGEPKCVVCGRYGEYICDETDD 60

Query: 61  DVCSMECKQSVLRKVA--NTMAPDKAPSKRLPAADECFYVKESNYSG--SLTCEQTEMLR 120
           D+CSMECKQSVL K+A  N +  D  P KRLPAADECFYVK+SN SG  SLTCEQTE+LR
Sbjct: 61  DICSMECKQSVLCKMANRNALPSDFPPPKRLPAADECFYVKDSNCSGSSSLTCEQTELLR 120

Query: 121 KKLGISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVS 180
           +KLGI IKGD+ CAP LSFS  NLPQKL QNLETAGYEMPT VQMQAIPAACLGKNLLVS
Sbjct: 121 RKLGIVIKGDIGCAPTLSFSSCNLPQKLLQNLETAGYEMPTAVQMQAIPAACLGKNLLVS 180

Query: 181 AETGSGKTVSYLVPIVSYCARACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMP 240
           AETGSGKTVSYLVPIVSYCAR  LE  HGEKKPLAMVLTPTRELCIQVE+ AKLLGKGMP
Sbjct: 181 AETGSGKTVSYLVPIVSYCARVRLENCHGEKKPLAMVLTPTRELCIQVEEHAKLLGKGMP 240

Query: 241 FKTALVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQ 300
           FKTALVVGGDALAGQ++RI+QGVELIVATPGRLVDLL KHDIE DE++TFVLDEVDCLLQ
Sbjct: 241 FKTALVVGGDALAGQVYRIEQGVELIVATPGRLVDLLMKHDIEFDELKTFVLDEVDCLLQ 300

Query: 301 KGFRDQVLQIFRALSVPQILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVV 360
           KGFRDQVLQIF ALS PQILMY+AT SPEVEKMA++MGDGTVII+  MSNKPTKALKQ+V
Sbjct: 301 KGFRDQVLQIFTALSRPQILMYSATTSPEVEKMARTMGDGTVIITAGMSNKPTKALKQLV 360

Query: 361 IWVESKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSM 420
           IWVESKNKKQKLFDIL SKQHFMPPLVVYVGSRLGADLLSNAITVTTGI ALSIHGHKSM
Sbjct: 361 IWVESKNKKQKLFDILASKQHFMPPLVVYVGSRLGADLLSNAITVTTGIKALSIHGHKSM 420

Query: 421 KERREAMRSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGE 480
           KERREAM+SF++G+VQVMVATGILGRGMDLL VRQVI+FDMPNSIKEYVHQIGRASRLGE
Sbjct: 421 KERREAMKSFLVGDVQVMVATGILGRGMDLLRVRQVIVFDMPNSIKEYVHQIGRASRLGE 480

Query: 481 EGKAIVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKYS 533
           EGKAIVFVN ENKNLFQDLVE LKSSGAPIPREL NSH+T NS + A+N +KRKY+
Sbjct: 481 EGKAIVFVNGENKNLFQDLVEILKSSGAPIPRELSNSHYTVNSLHAARNGRKRKYT 536

BLAST of CsaV3_3G020080 vs. TAIR10
Match: AT3G02065.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 612.8 bits (1579), Expect = 1.9e-175
Identity = 312/511 (61.06%), Postives = 391/511 (76.52%), Query Frame = 0

Query: 27  VKVKCIEQREAFPGEPKCVVCGRYGEYICDETDDDVCSMECKQSVLRKVANTMAPDKAPS 86
           VK K I+QR    GEPKCV+C RYGEYICDET+DDVCS+ECKQ++LR+V +        +
Sbjct: 14  VKQKSIDQRAPLSGEPKCVICSRYGEYICDETNDDVCSLECKQALLRRVDS--------A 73

Query: 87  KRLPAADECFYVKESNYSGSLTCEQTEMLRKKLGISIKGDLDCA--PILSFSFGNLPQKL 146
           +  PA DECFYV++   S        ++LR+KL I ++G       P+L+F+   LP KL
Sbjct: 74  RVFPATDECFYVRDPGSSS----HDAQLLRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKL 133

Query: 147 FQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETGSGKTVSYLVPIVSYCARACLECFH 206
             NLETAGY+ PTP+QMQAIPAA  GK+LL SA+TGSGKT S+LVPI+S C       +H
Sbjct: 134 LLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCT-----TYH 193

Query: 207 GE------KKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKTALVVGGDALAGQLHRIQQG 266
            E      + PLAMVL PTRELC+QVE QAK+LGKG+PFKTALVVGGD ++GQL+RIQQG
Sbjct: 194 SEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQG 253

Query: 267 VELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKGFRDQVLQIFRALSVPQILMY 326
           VELI+ TPGR+VDLL+KH IELD + TFVLDEVDC+LQ+GFRDQV+QIF+ALS PQ+L++
Sbjct: 254 VELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQALSQPQVLLF 313

Query: 327 TATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVVIWVESKNKKQKLFDILTSKQHF 386
           +AT S EVEK+  S+    +++S    NKP KA+ Q+ IWV++K KKQKLFDIL S+ HF
Sbjct: 314 SATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHF 373

Query: 387 MPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKERREAMRSFIMGEVQVMVATG 446
            PP VVYV SR+GADLL+NAITV TG+ ALSIHG K MKERR+ M SF+ GEV V+V+TG
Sbjct: 374 KPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTG 433

Query: 447 ILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEGKAIVFVNEENKNLFQDLVET 506
           +LGRG+DLL VRQVI+FDMP++IKEY+H IGRASR+GE+G AIVFVNE+++NLF DLV  
Sbjct: 434 VLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAA 493

Query: 507 LKSSGAPIPRELLNSHHTANSSYRAKNQKKR 530
           LKSSGA IP+EL+N      +S    N+K+R
Sbjct: 494 LKSSGAAIPKELINL-----TSREMHNKKRR 502

BLAST of CsaV3_3G020080 vs. TAIR10
Match: AT3G58570.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 232.3 bits (591), Expect = 7.2e-61
Identity = 134/404 (33.17%), Postives = 216/404 (53.47%), Query Frame = 0

Query: 121 ISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETG 180
           I   GD    P+ +F+  +L + L  N++   Y  PTPVQ  AIP    G++L+  A+TG
Sbjct: 134 IETSGDNVPPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTG 193

Query: 181 SGKTVSYLVPIVSYCARACLECFHGEKK-------PLAMVLTPTRELCIQVEQQAKLLGK 240
           SGKT ++  PI+S      ++  H E+        PLA++L+PTREL  Q+  +A+    
Sbjct: 194 SGKTAAFCFPIIS----GIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSY 253

Query: 241 GMPFKTALVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDC 300
               K  +  GG  +  Q+  +++GV+++VATPGRL DLL +  + L  VR   LDE D 
Sbjct: 254 QTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADR 313

Query: 301 LLQKGFRDQVLQIFRALSVP-----QILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKP 360
           +L  GF  Q+ +I + + +P     Q ++++AT   E++++A       + ++       
Sbjct: 314 MLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSS 373

Query: 361 TKALKQVVIWVESKNKKQKLFDIL-----TSKQHFMPPLVVYVGSRLGADLLSNAITVTT 420
           T  + Q V +V   +K+  L D+L        Q      +V+V ++ GAD L N + +  
Sbjct: 374 TDLIVQRVEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCI-N 433

Query: 421 GINALSIHGHKSMKERREAMRSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKE 480
           G  A +IHG +S +ER  A+RSF  G   ++VAT +  RG+D+  V  V+ FD+PN I +
Sbjct: 434 GFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 493

Query: 481 YVHQIGRASRLGEEGKAIVFVNEENKNLFQDLVETLKSSGAPIP 508
           YVH+IGR  R G  G A  F N+ N  + + L E ++ +   +P
Sbjct: 494 YVHRIGRTGRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVP 532

BLAST of CsaV3_3G020080 vs. TAIR10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 223.4 bits (568), Expect = 3.3e-58
Identity = 134/418 (32.06%), Postives = 228/418 (54.55%), Query Frame = 0

Query: 96  FYVKESNYSGSLTCEQTEMLRKKLGISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEM 155
           FYV ES    ++T +   M R +  IS++G     P+  F   N P  + + +   G+  
Sbjct: 129 FYV-ESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKLGFTE 188

Query: 156 PTPVQMQAIPAACLGKNLLVSAETGSGKTVSYLVP-IVSYCARACLECFHGEKKPLAMVL 215
           PTP+Q Q  P A  G++L+  AETGSGKT++YL+P +V   A+  L    G   P+ ++L
Sbjct: 189 PTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDDG---PIVLIL 248

Query: 216 TPTRELCIQVEQQAKLLGKGMPFKTALVVGGDALAGQLHRIQQGVELIVATPGRLVDLLT 275
            PTREL +Q++++++  G     ++  + GG     Q+  +++GVE+++ATPGRL+D+L 
Sbjct: 249 APTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDMLE 308

Query: 276 KHDIELDEVRTFVLDEVDCLLQKGFRDQVLQIFRALSVP-QILMYTATPSPEVEKMAKS- 335
                L  V   VLDE D +L  GF  Q+ +I   +    Q L+++AT   EVE +A+  
Sbjct: 309 CQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLARQF 368

Query: 336 MGDGTVIISTSMSNKPTKALKQVVIWVESKNKKQKLFDILTSKQHFMPPLVVYVGSRLGA 395
           + D    I  S   K  +++ QV+  V +  K  +L  +L         ++++V ++ G 
Sbjct: 369 LRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMD-GSKILIFVETKRGC 428

Query: 396 DLLSNAITVTTGINALSIHGHKSMKERREAMRSFIMGEVQVMVATGILGRGMDLLCVRQV 455
           D ++  + +  G  AL+IHG K+  ER   +  F  G   +M AT +  RG+D+  ++ V
Sbjct: 429 DQVTRQLRM-DGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCV 488

Query: 456 IIFDMPNSIKEYVHQIGRASRLGEEGKAIVFVNEENKNLFQDLVETLKSSGAPIPREL 511
           + +D PN++++Y+H+IGR  R G +G A  F   +N    ++LV+ L+ +G  +P  L
Sbjct: 489 VNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVKILQEAGQVVPPTL 540

BLAST of CsaV3_3G020080 vs. TAIR10
Match: AT2G33730.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 222.2 bits (565), Expect = 7.4e-58
Identity = 146/476 (30.67%), Postives = 246/476 (51.68%), Query Frame = 0

Query: 66  ECKQSVLRKVANTMAPDKAPSKRL--PAAD--ECFYVK-ESNYSGSLTCEQTE----MLR 125
           E +  + +K      P++A ++R+   AAD  + F ++ + ++S     E TE    + R
Sbjct: 237 EMRDEIRKKDGIVEKPEEAAAQRVREEAADTYDSFDMRVDRHWSDKRLEEMTERDWRIFR 296

Query: 126 KKLGISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVS 185
           +   IS KG     P+ S+    L  +L + +E AGY+ P+P+QM AIP     ++++  
Sbjct: 297 EDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGI 356

Query: 186 AETGSGKTVSYLVPIVSYCARACLECFHGEKK-PLAMVLTPTRELCIQVEQQAKLLGKGM 245
           AETGSGKT ++++P+++Y +R        E + P A+V+ PTREL  Q+E++       +
Sbjct: 357 AETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYL 416

Query: 246 PFKTALVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLL 305
            F+   +VGG ++  Q  +I QG E+++ATPGRL+D L +    L++    VLDE D ++
Sbjct: 417 GFRVTSIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMI 476

Query: 306 QKGFRDQVLQIFRALSVPQI------------------LMYTATPSPEVEKMAKSMGDGT 365
             GF  QV  +  A+    +                   M++AT  P VE++A+      
Sbjct: 477 DMGFEPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNP 536

Query: 366 VIISTSMSNKPTKALKQVVIWVESKNK---KQKLFDILTSKQHFMPPLVVYVGSRLGADL 425
           V+++   + K T  + Q VI ++   K    QKL D L  K       +V+V ++   D 
Sbjct: 537 VVVTIGTAGKTTDLISQHVIMMKESEKFFRLQKLLDELGEK-----TAIVFVNTKKNCDS 596

Query: 426 LSNAITVTTGINALSIHGHKSMKERREAMRSFIMGEVQVMVATGILGRGMDLLCVRQVII 485
           ++  +    G    ++HG KS ++R  ++  F      V+VAT ++GRG+D+  V  VI 
Sbjct: 597 IAKNLD-KAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVIN 656

Query: 486 FDMPNSIKEYVHQIGRASRLGEEGKAIVFVNEENKNLFQDLVETLKSSGAPIPREL 511
           +DMP  I+ Y H+IGR  R G+ G A  F+   +  +F DL + L  S + +P EL
Sbjct: 657 YDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEVFYDLKQMLVQSNSAVPPEL 706

BLAST of CsaV3_3G020080 vs. TAIR10
Match: AT1G55150.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 219.2 bits (557), Expect = 6.3e-57
Identity = 144/434 (33.18%), Postives = 230/434 (53.00%), Query Frame = 0

Query: 80  APDKAPSKRLPAADECFYVKESNYSGSLTCEQTEMLRKKLGISIKGDLDCAPILSFSFGN 139
           +P K     L   ++ FYV ES    ++T  + E  RK   I+++G     P+ SF    
Sbjct: 47  SPRKLDLDGLTPFEKNFYV-ESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVG 106

Query: 140 LPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETGSGKTVSYLVP-IVSYCARA 199
            P  + + ++ AG+  PTP+Q Q  P A  G++L+  AETGSGKT+SYL+P IV   A+ 
Sbjct: 107 FPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQP 166

Query: 200 CLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKTALVVGGDALAGQLHRIQQG 259
            L   HG+  P+ +VL PTREL +Q++Q+A   G     KT  + GG     Q+  +Q+G
Sbjct: 167 MLA--HGD-GPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKG 226

Query: 260 VELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKGFRDQVLQIFRALSVP-QILM 319
           VE+++ATPGRL+D++  ++  L  V   VLDE D +L  GF  Q+ +I   +    Q L 
Sbjct: 227 VEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLY 286

Query: 320 YTATPSPEVEKMAKS-MGDGTVIISTSMSNKPTKALKQVVIWVESKNKKQKLFDILTSKQ 379
           ++AT   EVE+++K  + +   +I  S   K  +A++Q+V  +    K  KL  +L    
Sbjct: 287 WSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIM 346

Query: 380 HFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKERREAMRSFIMGEVQVMVA 439
                ++V++ ++ G D ++  + +  G  ALSIHG KS  ER   +  F  G+  +M A
Sbjct: 347 D-GSRILVFLDTKKGCDQITRQLRM-DGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTA 406

Query: 440 TGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEGKAIVFVNEENKNLFQDLV 499
           T +  RG+D+  V+ VI +D P S+++YVH+IG                  N    ++L 
Sbjct: 407 TDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGXXXXXXXXXXXXXXXXVANARFAKELT 466

Query: 500 ETLKSSGAPIPREL 511
             L+ +G  +  EL
Sbjct: 467 NILQEAGQKVSPEL 474

BLAST of CsaV3_3G020080 vs. Swiss-Prot
Match: sp|Q0E2Z7|RH41_ORYSJ (DEAD-box ATP-dependent RNA helicase 41 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0201900 PE=2 SV=2)

HSP 1 Score: 617.5 bits (1591), Expect = 1.4e-175
Identity = 308/511 (60.27%), Postives = 396/511 (77.50%), Query Frame = 0

Query: 24  ESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDDDVCSMECKQSVLRKVANTMAPDK 83
           ES VK +C EQREA  GEP+CV+CGRYGEYICD+TDDD+CS+ECK  +L K++    P  
Sbjct: 24  ESSVKERCFEQREALVGEPRCVICGRYGEYICDQTDDDICSVECKTILLSKLSAETRPVV 83

Query: 84  APSKR--LPAADECFYVKESNYS--GSLTCEQTEMLRKKLGISIKGDLDCAPILSFSFGN 143
             +KR  LP  DE F +++ N+    S+   Q   LR KL I +KG+    PI+ FS   
Sbjct: 84  KAAKRVNLPVGDESFCIRDENFPKIPSMHDGQIASLRSKLDICVKGEDVPDPIMCFSSSG 143

Query: 144 LPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETGSGKTVSYLVPIVSYCARAC 203
           LP+KL  NLE AGY MPTPVQMQ IP++   ++LLVSA+TGSGKT S+LVPI+++C+   
Sbjct: 144 LPEKLVLNLEAAGYVMPTPVQMQVIPSSICNRSLLVSADTGSGKTASFLVPIIAHCSHVR 203

Query: 204 LECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKTALVVGGDALAGQLHRIQQGV 263
            E    ++ PLA+VL PTRELC+QVE+QAK+LGKG+PFKTALVVGGD LA Q++RI+ G+
Sbjct: 204 SERCTDKQGPLAIVLAPTRELCLQVEEQAKVLGKGLPFKTALVVGGDPLAQQIYRIENGI 263

Query: 264 ELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKGFRDQVLQIFRALSVPQILMYT 323
           ELIV TPGRL+DLL KH+++L++V  FVLDEVDCLL++GFRDQV+QIF+ALS PQ++M++
Sbjct: 264 ELIVGTPGRLIDLLMKHNVDLNKVDVFVLDEVDCLLERGFRDQVMQIFQALSHPQVMMFS 323

Query: 324 ATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVVIWVESKNKKQKLFDILTSKQHFM 383
           AT + EVEKM+ S+    + IS    ++P K++KQVVIWVESK KKQK+F+I+TSKQHF 
Sbjct: 324 ATVNSEVEKMSNSLAKNAIHISCGNPSRPNKSVKQVVIWVESKQKKQKIFEIMTSKQHFK 383

Query: 384 PPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKERREAMRSFIMGEVQVMVATGI 443
           PP VV+V SR+GADLLS AITV TG+  +SIHG K+M ERRE++R F+ GEV V+V TG+
Sbjct: 384 PPAVVFVSSRIGADLLSEAITVATGLKVVSIHGDKTMNERRESLRRFLTGEVSVVVCTGV 443

Query: 444 LGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEGKAIVFVNEENKNLFQDLVETL 503
           LGRGMDLL VRQVI+FDMPNSI EYVHQ+GRASR+G EG AIVFVNEE++NLF++LV+ L
Sbjct: 444 LGRGMDLLKVRQVILFDMPNSIDEYVHQVGRASRMGVEGMAIVFVNEEDRNLFRELVQIL 503

Query: 504 KSSGAPIPRELLNSHHTANSSYRAKNQKKRK 531
           K++GAPIPREL NS +T         ++K K
Sbjct: 504 KTAGAPIPRELANSKYTTGIPLGGGKKRKLK 534

BLAST of CsaV3_3G020080 vs. Swiss-Prot
Match: sp|Q3EBD3|RH41_ARATH (DEAD-box ATP-dependent RNA helicase 41 OS=Arabidopsis thaliana OX=3702 GN=RH41 PE=2 SV=1)

HSP 1 Score: 612.8 bits (1579), Expect = 3.5e-174
Identity = 312/511 (61.06%), Postives = 391/511 (76.52%), Query Frame = 0

Query: 27  VKVKCIEQREAFPGEPKCVVCGRYGEYICDETDDDVCSMECKQSVLRKVANTMAPDKAPS 86
           VK K I+QR    GEPKCV+C RYGEYICDET+DDVCS+ECKQ++LR+V +        +
Sbjct: 14  VKQKSIDQRAPLSGEPKCVICSRYGEYICDETNDDVCSLECKQALLRRVDS--------A 73

Query: 87  KRLPAADECFYVKESNYSGSLTCEQTEMLRKKLGISIKGDLDCA--PILSFSFGNLPQKL 146
           +  PA DECFYV++   S        ++LR+KL I ++G       P+L+F+   LP KL
Sbjct: 74  RVFPATDECFYVRDPGSSS----HDAQLLRRKLDIHVQGQGSAVPPPVLTFTSCGLPPKL 133

Query: 147 FQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETGSGKTVSYLVPIVSYCARACLECFH 206
             NLETAGY+ PTP+QMQAIPAA  GK+LL SA+TGSGKT S+LVPI+S C       +H
Sbjct: 134 LLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISRCT-----TYH 193

Query: 207 GE------KKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKTALVVGGDALAGQLHRIQQG 266
            E      + PLAMVL PTRELC+QVE QAK+LGKG+PFKTALVVGGD ++GQL+RIQQG
Sbjct: 194 SEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQG 253

Query: 267 VELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKGFRDQVLQIFRALSVPQILMY 326
           VELI+ TPGR+VDLL+KH IELD + TFVLDEVDC+LQ+GFRDQV+QIF+ALS PQ+L++
Sbjct: 254 VELIIGTPGRVVDLLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQALSQPQVLLF 313

Query: 327 TATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVVIWVESKNKKQKLFDILTSKQHF 386
           +AT S EVEK+  S+    +++S    NKP KA+ Q+ IWV++K KKQKLFDIL S+ HF
Sbjct: 314 SATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHF 373

Query: 387 MPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKERREAMRSFIMGEVQVMVATG 446
            PP VVYV SR+GADLL+NAITV TG+ ALSIHG K MKERR+ M SF+ GEV V+V+TG
Sbjct: 374 KPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTG 433

Query: 447 ILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEGKAIVFVNEENKNLFQDLVET 506
           +LGRG+DLL VRQVI+FDMP++IKEY+H IGRASR+GE+G AIVFVNE+++NLF DLV  
Sbjct: 434 VLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLFPDLVAA 493

Query: 507 LKSSGAPIPRELLNSHHTANSSYRAKNQKKR 530
           LKSSGA IP+EL+N      +S    N+K+R
Sbjct: 494 LKSSGAAIPKELINL-----TSREMHNKKRR 502

BLAST of CsaV3_3G020080 vs. Swiss-Prot
Match: sp|Q5T1V6|DDX59_HUMAN (Probable ATP-dependent RNA helicase DDX59 OS=Homo sapiens OX=9606 GN=DDX59 PE=1 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.9e-119
Identity = 229/500 (45.80%), Postives = 331/500 (66.20%), Query Frame = 0

Query: 24  ESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDDDVCSMECKQSVLRKV------AN 83
           E PVK     QR A PGEP CVVCGRYGEYICD+TD+DVCS+ECK   L +V      + 
Sbjct: 88  EEPVKSFSKTQRWAEPGEPICVVCGRYGEYICDKTDEDVCSLECKAKHLLQVKEKEEKSK 147

Query: 84  TMAPDKAPSKRLPAADECFYVKESNYSGSLTCEQTEMLRKKLGISIKGDLDCAPILSFSF 143
              P KA S+     +  +  KE  +  +L  +Q E L+++LGI ++G     PI+ F  
Sbjct: 148 LSNPQKADSEPESPLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEH 207

Query: 144 GNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETGSGKTVSYLVPIVSYCAR 203
            +LP+ L  NL+ +GYE+PTP+QMQ IP   LG+++L SA+TGSGKT ++L+P++    R
Sbjct: 208 CSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVI---MR 267

Query: 204 ACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMP-FKTALVVGGDALAGQLHRIQ 263
           A  E     K P A++LTPTREL IQ+E+QAK L  G+P  KT L+VGG  L  QL+R+Q
Sbjct: 268 ALFE----SKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQ 327

Query: 264 QGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKGFRDQVLQIFRALSVP--- 323
           Q V++I+ATPGRL+D++ +  +EL  V+  V+DE D +L+ GF+ QVL I    ++P   
Sbjct: 328 QHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLDILE--NIPNDC 387

Query: 324 QILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVVIWVESKNKKQKLFDILT 383
           Q ++ +AT    +E++A  +    V I T   N P   ++Q+++WVE   KK+KLF+IL 
Sbjct: 388 QTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVEDPAKKKKLFEILN 447

Query: 384 SKQHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKERREAMRSFIMGEVQV 443
            K+ F PP++V+V  +LGADLLS A+   TG+ ++SIH  KS  ER+  ++  + G+ +V
Sbjct: 448 DKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEGDYEV 507

Query: 444 MVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEGKAIVFVNEENKNLFQ 503
           +V+TG+LGRG+DL+ VR V+ FDMP+S+ EYVHQIGR  RLG+ G AI F+N  +K LF 
Sbjct: 508 VVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQIGRVGRLGQNGTAITFINNNSKRLFW 567

Query: 504 DLVETLKSSGAPIPRELLNS 514
           D+ + +K +G+ +P +LLNS
Sbjct: 568 DIAKRVKPTGSILPPQLLNS 578

BLAST of CsaV3_3G020080 vs. Swiss-Prot
Match: sp|Q9DBN9|DDX59_MOUSE (Probable ATP-dependent RNA helicase DDX59 OS=Mus musculus OX=10090 GN=Ddx59 PE=1 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 2.0e-116
Identity = 223/515 (43.30%), Postives = 334/515 (64.85%), Query Frame = 0

Query: 24  ESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDDDVCSMECKQSVLRKVANTMAPDK 83
           E PVK     QR   PGEP CVVCGRYGEYICD+TD+DVCS+ECK   L +V       +
Sbjct: 88  EEPVKSFSKTQRWPEPGEPVCVVCGRYGEYICDKTDEDVCSLECKAKHLLQVKEGEGSLR 147

Query: 84  APSKRLPAAD-----ECFYV-KESNYSGSLTCEQTEMLRKKLGISIKGDLDCAPILSFSF 143
             S +  AA+     + FYV KE  +  +L  +Q E L+++LGIS++G     PI+ F  
Sbjct: 148 PSSPQRVAAEPESPLDAFYVYKEHPFIVTLKEDQIETLKQQLGISVQGQDVARPIIDFEH 207

Query: 144 GNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETGSGKTVSYLVPIVSYCAR 203
              P+ L QNL+ +GYE+PTP+QMQ IP   LG+++L SA+TGSGKT ++L+P++     
Sbjct: 208 CGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVI----- 267

Query: 204 ACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMP-FKTALVVGGDALAGQLHRIQ 263
             +  F  +K P A++LTPTREL IQ+E+QAK L  G+P  KT L+VGG  L  QL+R++
Sbjct: 268 --IRAFSEDKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLR 327

Query: 264 QGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKGFRDQVLQIFRALSVP-QI 323
           Q V++I+ATPGRL+D++ +  + L  ++  V+DE D +L+ GF+ QVL +        Q 
Sbjct: 328 QHVKVIIATPGRLLDIIKQSSVSLSGIKIVVVDEADTMLKMGFQQQVLDVLEHTPGDCQT 387

Query: 324 LMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVVIWVESKNKKQKLFDILTSK 383
           ++ +AT    +E++   +    V I T   N P  +++Q+++WVE   KK+KLF+IL  +
Sbjct: 388 ILVSATIPDSIEQLTDQLLHNPVRIITGDKNLPCASVRQIILWVEDPAKKKKLFEILNDQ 447

Query: 384 QHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKERREAMRSFIMGEVQVMV 443
           + F PP++V+V  +LGADLLS A+   TG+N+ SIH  KS  ERR+ ++  + G+ +V+V
Sbjct: 448 KLFKPPVLVFVDCKLGADLLSEAVQKITGLNSTSIHSEKSQVERRDILKGLLEGDYEVVV 507

Query: 444 ATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEGKAIVFVNEENKNLFQDL 503
           +TG+LGRG+DL+ V+ V+ FDMP+S+ EYVHQ+GR     + G AI F+N  +K LF D+
Sbjct: 508 STGVLGRGLDLVNVKLVVNFDMPSSMDEYVHQVGRVXXXXQNGTAITFINNNSKRLFWDV 567

Query: 504 VETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRK 531
            + +K +G+ +P +LLNS +  +   R + QK R+
Sbjct: 568 AKRVKPTGSILPPQLLNSPY-LHEQKRKEQQKDRQ 594

BLAST of CsaV3_3G020080 vs. Swiss-Prot
Match: sp|Q66HG7|DDX59_RAT (Probable ATP-dependent RNA helicase DDX59 OS=Rattus norvegicus OX=10116 GN=Ddx59 PE=2 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 8.5e-104
Identity = 213/515 (41.36%), Postives = 314/515 (60.97%), Query Frame = 0

Query: 24  ESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDDDVCSMECKQSVLRKVANTMAPDK 83
           E PVK     QR   PGEP CVVCGRYGEYICD+TD+DVCS+ECK   L +V       K
Sbjct: 88  EEPVKSFSKTQRWPEPGEPVCVVCGRYGEYICDKTDEDVCSLECKAKHLLQVKEEEGSLK 147

Query: 84  APSKRLPAAD-----ECFYV-KESNYSGSLTCEQTEMLRKKLGISIKGDLDCAPILSFSF 143
             S +  A++     + FYV KE  +  +L  +Q E L+++LGIS++G     PI+ F  
Sbjct: 148 PSSPQGAASEPESPLDAFYVYKEHPFIVALRDDQIETLKQQLGISVQGQEVARPIIDFEH 207

Query: 144 GNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETGSGKTVSYLVPIVSYCAR 203
              P+ L QNL+ +GYE+PTP+QMQ IP   LG+++L SA+TGSGKT ++L+P++     
Sbjct: 208 CGFPETLNQNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVI----- 267

Query: 204 ACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMP-FKTALVVGGDALAGQLHRIQ 263
             +     +K P A++LTPTREL IQ+E+QAK L +G+P  KT L+VGG  L  QL+R+Q
Sbjct: 268 --IRALPEDKTPSALILTPTRELAIQIERQAKELMRGLPRMKTVLLVGGLPLPPQLYRLQ 327

Query: 264 QGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKGFRDQVLQIF-RALSVPQI 323
           Q V                              + D +L+ GF+ QVL +     S  Q 
Sbjct: 328 QHV------------------------------KADTMLKMGFQQQVLDVLEHTPSDCQT 387

Query: 324 LMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVVIWVESKNKKQKLFDILTSK 383
           ++ +AT    ++++A  +    V I T   N P  +++Q+++WVE   KK+KLF+IL  +
Sbjct: 388 VLVSATIPDSIDQLADQLLHNPVRIVTGDKNLPCSSVRQIILWVEDPAKKKKLFEILNDQ 447

Query: 384 QHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKERREAMRSFIMGEVQVMV 443
           + F PP++V+V  +LGADLLS A+   TG+++ SIH  KS  ERRE ++  + G+ +V+V
Sbjct: 448 KLFKPPVLVFVDCKLGADLLSEAVQKITGLSSTSIHSEKSQVERREILKGLLEGDYEVVV 507

Query: 444 ATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEGKAIVFVNEENKNLFQDL 503
           +TGILGRG+DL+ V+ V+ FDMP+S+ EYVHQ+GR     + G AI F+N  +K LF D+
Sbjct: 508 STGILGRGLDLVNVKLVVNFDMPSSLDEYVHQVGRVXXXXQNGTAITFINNNSKRLFWDV 564

Query: 504 VETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRK 531
            + +K +G+ +P +LLNS +  +   R + QK R+
Sbjct: 568 AKRVKPTGSILPPQLLNSPY-LHEQKRKEQQKDRQ 564

BLAST of CsaV3_3G020080 vs. TrEMBL
Match: tr|A0A0A0LAK1|A0A0A0LAK1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G252460 PE=4 SV=1)

HSP 1 Score: 1054.3 bits (2725), Expect = 9.2e-305
Identity = 532/532 (100.00%), Postives = 532/532 (100.00%), Query Frame = 0

Query: 1   MDNGNKDCVPEALSKLVDADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDD 60
           MDNGNKDCVPEALSKLVDADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDD
Sbjct: 1   MDNGNKDCVPEALSKLVDADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDD 60

Query: 61  DVCSMECKQSVLRKVANTMAPDKAPSKRLPAADECFYVKESNYSGSLTCEQTEMLRKKLG 120
           DVCSMECKQSVLRKVANTMAPDKAPSKRLPAADECFYVKESNYSGSLTCEQTEMLRKKLG
Sbjct: 61  DVCSMECKQSVLRKVANTMAPDKAPSKRLPAADECFYVKESNYSGSLTCEQTEMLRKKLG 120

Query: 121 ISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETG 180
           ISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETG
Sbjct: 121 ISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETG 180

Query: 181 SGKTVSYLVPIVSYCARACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKTA 240
           SGKTVSYLVPIVSYCARACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKTA
Sbjct: 181 SGKTVSYLVPIVSYCARACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKTA 240

Query: 241 LVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKGFR 300
           LVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKGFR
Sbjct: 241 LVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKGFR 300

Query: 301 DQVLQIFRALSVPQILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVVIWVE 360
           DQVLQIFRALSVPQILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVVIWVE
Sbjct: 301 DQVLQIFRALSVPQILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVVIWVE 360

Query: 361 SKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKERR 420
           SKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKERR
Sbjct: 361 SKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKERR 420

Query: 421 EAMRSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEGKA 480
           EAMRSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEGKA
Sbjct: 421 EAMRSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEGKA 480

Query: 481 IVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKYS 533
           IVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKYS
Sbjct: 481 IVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKYS 532

BLAST of CsaV3_3G020080 vs. TrEMBL
Match: tr|A0A1S4DXZ0|A0A1S4DXZ0_CUCME (DEAD-box ATP-dependent RNA helicase 41 OS=Cucumis melo OX=3656 GN=LOC103491698 PE=4 SV=1)

HSP 1 Score: 994.6 bits (2570), Expect = 8.7e-287
Identity = 509/533 (95.50%), Postives = 516/533 (96.81%), Query Frame = 0

Query: 1   MDNGNKDCVPEALSKLVDADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDD 60
           MDNGNKDCVPEALSK  D DDSGES VKVKC EQREAFPGEPKCVVCGRYGEYICDETDD
Sbjct: 1   MDNGNKDCVPEALSKSAD-DDSGESAVKVKCNEQREAFPGEPKCVVCGRYGEYICDETDD 60

Query: 61  DVCSMECKQSVLRKVANTMAPDKAPSKRLPAADECFYVKESNYSG-SLTCEQTEMLRKKL 120
           DVCSMECKQSVL KVAN+MAPDK PSKRLPAADECFYVKESNYSG SLTCEQTEMLRKKL
Sbjct: 61  DVCSMECKQSVLCKVANSMAPDKPPSKRLPAADECFYVKESNYSGSSLTCEQTEMLRKKL 120

Query: 121 GISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAET 180
           GISIKGDLDCAPILSFSFG+LP+KL QNLETAGYEMPTPVQMQAIPAACLGKNLLVSAET
Sbjct: 121 GISIKGDLDCAPILSFSFGDLPEKLLQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAET 180

Query: 181 GSGKTVSYLVPIVSYCARACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKT 240
           GSGKT+SYLVPIVSYC RA LECF GEKKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKT
Sbjct: 181 GSGKTMSYLVPIVSYCTRARLECFRGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMPFKT 240

Query: 241 ALVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQKGF 300
           ALVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDE+RTFVLDEVDCLLQKGF
Sbjct: 241 ALVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEMRTFVLDEVDCLLQKGF 300

Query: 301 RDQVLQIFRALSVPQILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVVIWV 360
           RDQVLQIFRALS PQILMYTAT SPEVEKMAKSMGDGTVI+STSMSNKPTKALKQVVIWV
Sbjct: 301 RDQVLQIFRALSGPQILMYTATTSPEVEKMAKSMGDGTVIMSTSMSNKPTKALKQVVIWV 360

Query: 361 ESKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSMKER 420
           ESKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGI ALSIHGHKSMKER
Sbjct: 361 ESKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGIKALSIHGHKSMKER 420

Query: 421 REAMRSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGEEGK 480
           REAM+SFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLG EGK
Sbjct: 421 REAMKSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGGEGK 480

Query: 481 AIVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKYS 533
           AIVFVN ENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKYS
Sbjct: 481 AIVFVNGENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKYS 532

BLAST of CsaV3_3G020080 vs. TrEMBL
Match: tr|A0A2P4MRP1|A0A2P4MRP1_QUESU (Dead-box atp-dependent rna helicase 41 OS=Quercus suber OX=58331 GN=CFP56_35977 PE=4 SV=1)

HSP 1 Score: 731.9 bits (1888), Expect = 1.0e-207
Identity = 368/535 (68.79%), Postives = 444/535 (82.99%), Query Frame = 0

Query: 1   MDNGNKDCVPEALSKLVDADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDD 60
           M++GN D   ++     D +++ E  +K +C +QREA  GEPKCV+CGRYGEYICD+TDD
Sbjct: 1   MEDGNCDTRCKSPLLSTDGEEANEDKIKERCWDQREAVLGEPKCVICGRYGEYICDQTDD 60

Query: 61  DVCSMECKQSVLRKVANTMAPDK-APSKRLPAADECFYVKES-NYSGSLT--CEQTEMLR 120
           D+CS+ECK ++L +VAN+  P +  P+K+LPA DECFYV++S + SGSL+   +Q E+LR
Sbjct: 61  DICSLECKNTLLCRVANSQKPVRLPPAKKLPATDECFYVRDSDDKSGSLSLPMDQAELLR 120

Query: 121 KKLGISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVS 180
           KKL I +KG+L  API+SFS  NLP+KL QN+E AGYEMPTPVQMQ IPAA  GK+LLVS
Sbjct: 121 KKLEIHVKGELTAAPIISFSSSNLPKKLLQNIEAAGYEMPTPVQMQGIPAALTGKSLLVS 180

Query: 181 AETGSGKTVSYLVPIVSYCARACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMP 240
           A+TGSGKT S+LVPIVS CA   LE    +KKPLA++LTPTRELCIQVE+ AKLL KG+P
Sbjct: 181 ADTGSGKTASFLVPIVSRCASVRLESSTNQKKPLAIILTPTRELCIQVEEHAKLLAKGLP 240

Query: 241 FKTALVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQ 300
           FKTALVVGGD +AGQ HRI+ GVELIV TPGRL+DLLTKHDIELD+V  FVLDEVD +LQ
Sbjct: 241 FKTALVVGGDPMAGQRHRIEGGVELIVGTPGRLIDLLTKHDIELDDVIFFVLDEVDSMLQ 300

Query: 301 KGFRDQVLQIFRALSVPQILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVV 360
           +GFRDQV+QIFRALS PQ+LMY+AT SPEVEKMA SM  G V+IS    N+P+K++KQ+ 
Sbjct: 301 RGFRDQVMQIFRALSQPQVLMYSATISPEVEKMASSMAKGIVVISVGKPNRPSKSVKQLA 360

Query: 361 IWVESKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSM 420
           IWVESK+KKQKLFDIL SKQHFMPP++VYVGSRLGADLLSNAITVTTG+  LSIHG KSM
Sbjct: 361 IWVESKHKKQKLFDILMSKQHFMPPVLVYVGSRLGADLLSNAITVTTGMKTLSIHGEKSM 420

Query: 421 KERREAMRSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGE 480
           KERRE MRSF++GE+ V+VATG+LGRG+DLL VRQVI+FDMPNSIKEY+HQIGRASRLG+
Sbjct: 421 KERREIMRSFLVGEIPVVVATGVLGRGVDLLGVRQVIVFDMPNSIKEYIHQIGRASRLGD 480

Query: 481 EGKAIVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKY 532
           EG AIVF+NEENKN+F +L+E LKSSGA +PREL+NS +   S    K QKKRK+
Sbjct: 481 EGTAIVFLNEENKNMFPELIEILKSSGAAVPRELVNSRYAVGSFSVGKGQKKRKH 535

BLAST of CsaV3_3G020080 vs. TrEMBL
Match: tr|A0A2N9EB84|A0A2N9EB84_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4119 PE=4 SV=1)

HSP 1 Score: 730.3 bits (1884), Expect = 3.1e-207
Identity = 373/537 (69.46%), Postives = 443/537 (82.50%), Query Frame = 0

Query: 1   MDNGNKD--CVPEALSKLVDADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDET 60
           M++GN D  C+   LS   D + S     K +C +QREA PGEPKCV+CGRYGEYICD+T
Sbjct: 1   MEDGNDDNRCLSPRLS--TDGEVSAADKTKERCWDQREALPGEPKCVICGRYGEYICDQT 60

Query: 61  DDDVCSMECKQSVLRKVANTMAP-DKAPSKRLPAADECFYVKES-NYSGSLT--CEQTEM 120
           DDD+CS+ECK ++L +VA +  P    P K+LPA DECFYV++S + SGSL+   +Q E+
Sbjct: 61  DDDICSLECKNTLLCRVAKSQLPVSLPPPKKLPATDECFYVRDSDDKSGSLSLPMDQAEL 120

Query: 121 LRKKLGISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLL 180
           LR KL I +KG+LD APILSF   NLPQKL QN+E AGY+MPTPVQMQAIPAA +GK+LL
Sbjct: 121 LRNKLEIHVKGELDVAPILSFPSFNLPQKLLQNIEAAGYDMPTPVQMQAIPAALIGKSLL 180

Query: 181 VSAETGSGKTVSYLVPIVSYCARACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKG 240
           VSA+TGSGKT S+LVPIVS CA   LE    +KKPLA++LTPTRELCIQVE+ AKLL KG
Sbjct: 181 VSADTGSGKTASFLVPIVSRCASIQLESPSNQKKPLAIILTPTRELCIQVEEHAKLLAKG 240

Query: 241 MPFKTALVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCL 300
           +PFKTALVVGGD +AGQ HRI+ GVELIV TPGRL+DLLTKHDIELD+V  FVLDEVD +
Sbjct: 241 LPFKTALVVGGDPMAGQRHRIEGGVELIVGTPGRLIDLLTKHDIELDDVIFFVLDEVDSM 300

Query: 301 LQKGFRDQVLQIFRALSVPQILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQ 360
           LQ+GFRDQV+QIFRALS PQ+LMY+AT SPEVEKMA SM  G V+IS    N+P+K++KQ
Sbjct: 301 LQRGFRDQVMQIFRALSQPQVLMYSATISPEVEKMASSMAKGNVVISVGKPNRPSKSVKQ 360

Query: 361 VVIWVESKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHK 420
           +VIWVE K+KKQKLFDIL SKQHFMPP+VVYVGSRLGADLLSNAITVTTG+ ALSIHG K
Sbjct: 361 LVIWVEPKHKKQKLFDILMSKQHFMPPVVVYVGSRLGADLLSNAITVTTGMKALSIHGEK 420

Query: 421 SMKERREAMRSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRL 480
           SMKERRE MRSF++GEV V+VATG+LGRG+DLL VRQVI+FDMPNSIKEY+HQIGRASRL
Sbjct: 421 SMKERREIMRSFLVGEVPVVVATGVLGRGVDLLGVRQVIVFDMPNSIKEYIHQIGRASRL 480

Query: 481 GEEGKAIVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHHTANSSYRAKNQKKRKY 532
           G++G AIVF+NEENKN+F +L+E LKS+GA +PREL+NS +   S    K QKKRK+
Sbjct: 481 GDDGTAIVFLNEENKNMFPELIEILKSAGAAVPRELVNSRYAVGSFSVGKAQKKRKH 535

BLAST of CsaV3_3G020080 vs. TrEMBL
Match: tr|F6H410|F6H410_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0068g00710 PE=4 SV=1)

HSP 1 Score: 711.4 bits (1835), Expect = 1.5e-201
Identity = 366/538 (68.03%), Postives = 434/538 (80.67%), Query Frame = 0

Query: 1   MDNGNKDCVPEALSKLVDADDSGESPVKVKCIEQREAFPGEPKCVVCGRYGEYICDETDD 60
           M++G K    +   +L D ++     VK +C +QREA PGEPKCV+CGRYGEYICDETDD
Sbjct: 1   MEDGKKGNQGKNSVELTDDNEGTADGVKERCWDQREALPGEPKCVICGRYGEYICDETDD 60

Query: 61  DVCSMECKQSVLRKVANTMAP-DKAPSKRLPAADECFYVKES---NYSGSLTCEQTEMLR 120
           D+CS+ECKQ++L +VA +  P    P KRLP  DECFYV++S   + S SLT  QTEMLR
Sbjct: 61  DICSLECKQTLLCRVAKSRLPVVLPPPKRLPTTDECFYVRDSGDKSGSQSLTGSQTEMLR 120

Query: 121 KKLGISIKGDLDCAPILSFSFGNLPQKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVS 180
           ++L I ++GD D +PILSFS  NLPQKL QN+E AGYE+PTPVQMQAIPAA +GKNLLVS
Sbjct: 121 RRLEICVRGDFDLSPILSFSSCNLPQKLLQNIEAAGYEIPTPVQMQAIPAALVGKNLLVS 180

Query: 181 AETGSGKTVSYLVPIVSYCARACLECFHGEKKPLAMVLTPTRELCIQVEQQAKLLGKGMP 240
           A+TGSGKT S+LVPIVS C     +    +K PLAMVLTPTRELC+QVE+QAKLLGKG+P
Sbjct: 181 ADTGSGKTASFLVPIVSRCTSIRPDHSPNQKNPLAMVLTPTRELCMQVEEQAKLLGKGLP 240

Query: 241 FKTALVVGGDALAGQLHRIQQGVELIVATPGRLVDLLTKHDIELDEVRTFVLDEVDCLLQ 300
           FKTALVVGGDA+  QLHRIQQGVELIV TPGRL+DLL+KH+IELD+V   VLDEVDC+L+
Sbjct: 241 FKTALVVGGDAMPRQLHRIQQGVELIVGTPGRLIDLLSKHEIELDDVFMLVLDEVDCMLE 300

Query: 301 KGFRDQVLQIFRALSVPQILMYTATPSPEVEKMAKSMGDGTVIISTSMSNKPTKALKQVV 360
           +GFRDQV+QI+RALS PQ+LMY+AT S EVEK+A SM    ++IS   SN+P  A+KQ+ 
Sbjct: 301 RGFRDQVMQIYRALSQPQVLMYSATISQEVEKVASSMAKDIIVISVGKSNRPNIAVKQLA 360

Query: 361 IWVESKNKKQKLFDILTSKQHFMPPLVVYVGSRLGADLLSNAITVTTGINALSIHGHKSM 420
           IWVESK KKQKLFDILTSKQHF PP+VV+VGSRLGADLL+ AIT+TTG+ ALSIHG KSM
Sbjct: 361 IWVESKQKKQKLFDILTSKQHFTPPVVVFVGSRLGADLLTEAITITTGLKALSIHGEKSM 420

Query: 421 KERREAMRSFIMGEVQVMVATGILGRGMDLLCVRQVIIFDMPNSIKEYVHQIGRASRLGE 480
           KERRE M SF++GEV VMVATG+L RG+DLL VRQVI+FDMPNSIKEYVHQIGRASRLGE
Sbjct: 421 KERREIMSSFLVGEVPVMVATGVLSRGVDLLSVRQVIVFDMPNSIKEYVHQIGRASRLGE 480

Query: 481 EGKAIVFVNEENKNLFQDLVETLKSSGAPIPRELLNSHH---TANSSYRAKNQKKRKY 532
           EG AI+F+NEEN+NLF +LVE LKSSGA IPREL NS +   + N       QKKRK+
Sbjct: 481 EGTAILFLNEENRNLFPELVEILKSSGAAIPRELANSRYRLGSVNVGRGQIRQKKRKH 538

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004145645.11.4e-304100.00PREDICTED: DEAD-box ATP-dependent RNA helicase 41 [Cucumis sativus] >XP_01165133... [more]
XP_016900847.11.3e-28695.50PREDICTED: DEAD-box ATP-dependent RNA helicase 41 [Cucumis melo][more]
XP_022148242.17.5e-25885.21DEAD-box ATP-dependent RNA helicase 41 [Momordica charantia] >XP_022148243.1 DEA... [more]
XP_023529324.14.1e-25685.07DEAD-box ATP-dependent RNA helicase 41 [Cucurbita pepo subsp. pepo][more]
XP_022989622.12.0e-25584.89DEAD-box ATP-dependent RNA helicase 41 [Cucurbita maxima] >XP_022989624.1 DEAD-b... [more]
Match NameE-valueIdentityDescription
AT3G02065.21.9e-17561.06P-loop containing nucleoside triphosphate hydrolases superfamily protein[more]
AT3G58570.17.2e-6133.17P-loop containing nucleoside triphosphate hydrolases superfamily protein[more]
AT5G63120.23.3e-5832.06P-loop containing nucleoside triphosphate hydrolases superfamily protein[more]
AT2G33730.17.4e-5830.67P-loop containing nucleoside triphosphate hydrolases superfamily protein[more]
AT1G55150.16.3e-5733.18DEA(D/H)-box RNA helicase family protein[more]
Match NameE-valueIdentityDescription
sp|Q0E2Z7|RH41_ORYSJ1.4e-17560.27DEAD-box ATP-dependent RNA helicase 41 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
sp|Q3EBD3|RH41_ARATH3.5e-17461.06DEAD-box ATP-dependent RNA helicase 41 OS=Arabidopsis thaliana OX=3702 GN=RH41 P... [more]
sp|Q5T1V6|DDX59_HUMAN1.9e-11945.80Probable ATP-dependent RNA helicase DDX59 OS=Homo sapiens OX=9606 GN=DDX59 PE=1 ... [more]
sp|Q9DBN9|DDX59_MOUSE2.0e-11643.30Probable ATP-dependent RNA helicase DDX59 OS=Mus musculus OX=10090 GN=Ddx59 PE=1... [more]
sp|Q66HG7|DDX59_RAT8.5e-10441.36Probable ATP-dependent RNA helicase DDX59 OS=Rattus norvegicus OX=10116 GN=Ddx59... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LAK1|A0A0A0LAK1_CUCSA9.2e-305100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G252460 PE=4 SV=1[more]
tr|A0A1S4DXZ0|A0A1S4DXZ0_CUCME8.7e-28795.50DEAD-box ATP-dependent RNA helicase 41 OS=Cucumis melo OX=3656 GN=LOC103491698 P... [more]
tr|A0A2P4MRP1|A0A2P4MRP1_QUESU1.0e-20768.79Dead-box atp-dependent rna helicase 41 OS=Quercus suber OX=58331 GN=CFP56_35977 ... [more]
tr|A0A2N9EB84|A0A2N9EB84_FAGSY3.1e-20769.46Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4119 PE=4 SV=1[more]
tr|F6H410|F6H410_VITVI1.5e-20168.03Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_14s0068g00710 PE=4 SV=... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014014RNA_helicase_DEAD_Q_motif
IPR007529Znf_HIT
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0010501 RNA secondary structure unwinding
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005730 nucleolus
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0004004 ATP-dependent RNA helicase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G020080.1CsaV3_3G020080.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 393..475
e-value: 8.6E-21
score: 85.1
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 397..475
e-value: 1.0E-18
score: 67.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 351..514
score: 19.019
IPR001650Helicase, C-terminalCDDcd00079HELICccoord: 352..483
e-value: 2.36324E-26
score: 103.086
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 152..355
e-value: 2.9E-48
score: 176.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 164..340
score: 25.448
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 340..517
e-value: 4.0E-42
score: 145.5
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 98..339
e-value: 2.0E-65
score: 222.5
NoneNo IPR availableGENE3DG3DSA:3.30.60.220coord: 23..80
e-value: 6.6E-24
score: 84.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 507..532
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 17..529
NoneNo IPR availablePANTHERPTHR24031:SF42ATP-DEPENDENT RNA HELICASE DDX59-RELATEDcoord: 17..529
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 157..328
e-value: 2.2E-41
score: 141.4
IPR007529Zinc finger, HIT-typePFAMPF04438zf-HITcoord: 42..68
e-value: 1.7E-6
score: 27.7
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 133..161
score: 10.145
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 208..494