CsaV3_3G019490 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCTACTTGGTGGTATGATCTGTTGTGTGGTAATCTCTAATATTTACAATATTTCAGCCCATAGCATATAAGAAATGGAGTATTCAACTATTATGAGGATGTCAAAATTTGTTGCATTTTCCTATCCAAAGCTCATTAACAACACTAAAACTCAACTTTACCTCGTTAAAATTTGTTCTAAATTCCAAAGAGAATTTGCCTATGATTATGATAACTCGGCTTTATCTGTTTTGGTTTTAGTAGTGTACCTCTTTAGGCAGTTAACTTGTTTCTTGTTCTTTAGACTGGACTGAGCGGAGCGCTTGAAACACTTTGTGGCCAGGCATTTGGTAGGAAGTTTTATGGGAAGATGGAGTTGTATCTTCAAGGCTCTTGCATCTTAACATTCTTTTGTTCCATCATTCTATCGGTTTTATGGATTTACACAGAACAAATTCTAGTGTTGCTCTATCAAGAACCAGAAATTTCAAGGATATCTGCAATGTATATGAAGTTTCTCATCCCAAAATTATTTGCATATGGCTTACTCCAAAACATCATGAGATTCCTCCAAACACAGTTTGTTGTCATGCCTTTGGTTCTCTTTTCTACTGTCCCAATGCTCATCCACATACCTATTGCATACGGTCTTGTTCACTAGACACATCTCGGTTTCAATGGAGCTTCATTAGCTGCTTTAATCTCATTATGGGTGGCATGCCTGATTTTGGCCATATGTGTACTTAAAGCAAACA ATGCCTCTACTTGGTGGTATGATCTGTTGTGTGACTGGACTGAGCGGAGCGCTTGAAACACTTTGTGGCCAGGCATTTGGTAGGAAGTTTTATGGGAAGATGGAGTTGTATCTTCAAGGCTCTTGCATCTTAACATTCTTTTGTTCCATCATTCTATCGGTTTTATGGATTTACACAGAACAAATTCTAGTGTTGCTCTATCAAGAACCAGAAATTTCAAGGATATCTGCAATGTATATGAAGTTTCTCATCCCAAAATTATTTGCATATGGCTTACTCCAAAACATCATGAGATTCCTCCAAACACAGTTTGTTGTCATGCCTTTGGTTCTCTTTTCTACTGTCCCAATGCTCATCCACATACCTATTGCATACGGTCTTGTTCACTAG ATGCCTCTACTTGGTGGTATGATCTGTTGTGTGACTGGACTGAGCGGAGCGCTTGAAACACTTTGTGGCCAGGCATTTGGTAGGAAGTTTTATGGGAAGATGGAGTTGTATCTTCAAGGCTCTTGCATCTTAACATTCTTTTGTTCCATCATTCTATCGGTTTTATGGATTTACACAGAACAAATTCTAGTGTTGCTCTATCAAGAACCAGAAATTTCAAGGATATCTGCAATGTATATGAAGTTTCTCATCCCAAAATTATTTGCATATGGCTTACTCCAAAACATCATGAGATTCCTCCAAACACAGTTTGTTGTCATGCCTTTGGTTCTCTTTTCTACTGTCCCAATGCTCATCCACATACCTATTGCATACGGTCTTGTTCACTAG MPLLGGMICCVTGLSGALETLCGQAFGRKFYGKMELYLQGSCILTFFCSIILSVLWIYTEQILVLLYQEPEISRISAMYMKFLIPKLFAYGLLQNIMRFLQTQFVVMPLVLFSTVPMLIHIPIAYGLVH
BLAST of CsaV3_3G019490 vs. NCBI nr
Match: KGN57629.1 (hypothetical protein Csa_3G233990 [Cucumis sativus]) HSP 1 Score: 251.9 bits (642), Expect = 1.2e-63 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. NCBI nr
Match: XP_008456028.1 (PREDICTED: protein DETOXIFICATION 18-like [Cucumis melo]) HSP 1 Score: 207.6 bits (527), Expect = 2.5e-50 Identity = 108/119 (90.76%), Postives = 111/119 (93.28%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. NCBI nr
Match: XP_022923003.1 (protein DETOXIFICATION 18-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 199.1 bits (505), Expect = 9.0e-48 Identity = 102/119 (85.71%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. NCBI nr
Match: XP_022923002.1 (protein DETOXIFICATION 18-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 199.1 bits (505), Expect = 9.0e-48 Identity = 102/119 (85.71%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. NCBI nr
Match: XP_022984411.1 (protein DETOXIFICATION 18-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 199.1 bits (505), Expect = 9.0e-48 Identity = 101/119 (84.87%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. TAIR10
Match: AT3G23550.1 (MATE efflux family protein) HSP 1 Score: 134.4 bits (337), Expect = 5.0e-32 Identity = 66/119 (55.46%), Postives = 91/119 (76.47%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. TAIR10
Match: AT3G23560.1 (MATE efflux family protein) HSP 1 Score: 125.2 bits (313), Expect = 3.0e-29 Identity = 63/119 (52.94%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. TAIR10
Match: AT1G66760.2 (MATE efflux family protein) HSP 1 Score: 103.6 bits (257), Expect = 9.4e-23 Identity = 48/117 (41.03%), Postives = 82/117 (70.09%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. TAIR10
Match: AT1G73700.1 (MATE efflux family protein) HSP 1 Score: 99.4 bits (246), Expect = 1.8e-21 Identity = 51/113 (45.13%), Postives = 76/113 (67.26%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. TAIR10
Match: AT2G04050.1 (MATE efflux family protein) HSP 1 Score: 95.5 bits (236), Expect = 2.6e-20 Identity = 50/117 (42.74%), Postives = 75/117 (64.10%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. Swiss-Prot
Match: sp|Q9LUH3|DTX18_ARATH (Protein DETOXIFICATION 18 OS=Arabidopsis thaliana OX=3702 GN=DTX18 PE=2 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 8.9e-31 Identity = 66/119 (55.46%), Postives = 91/119 (76.47%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. Swiss-Prot
Match: sp|Q9LUH2|DTX19_ARATH (Protein DETOXIFICATION 19 OS=Arabidopsis thaliana OX=3702 GN=DTX19 PE=2 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 5.4e-28 Identity = 63/119 (52.94%), Postives = 88/119 (73.95%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. Swiss-Prot
Match: sp|Q9C9M8|DTX9_ARATH (Protein DETOXIFICATION 9 OS=Arabidopsis thaliana OX=3702 GN=DTX9 PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.7e-21 Identity = 48/117 (41.03%), Postives = 82/117 (70.09%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. Swiss-Prot
Match: sp|Q9C9U1|DTX17_ARATH (Protein DETOXIFICATION 17 OS=Arabidopsis thaliana OX=3702 GN=DTX17 PE=2 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 3.2e-20 Identity = 51/113 (45.13%), Postives = 76/113 (67.26%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. Swiss-Prot
Match: sp|Q9SIA4|DTX3_ARATH (Protein DETOXIFICATION 3 OS=Arabidopsis thaliana OX=3702 GN=DTX3 PE=3 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 4.6e-19 Identity = 50/117 (42.74%), Postives = 75/117 (64.10%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. TrEMBL
Match: tr|A0A0A0L9H5|A0A0A0L9H5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G233990 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 7.8e-64 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. TrEMBL
Match: tr|A0A1S3C2Z1|A0A1S3C2Z1_CUCME (Protein DETOXIFICATION OS=Cucumis melo OX=3656 GN=LOC103496079 PE=3 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 1.7e-50 Identity = 108/119 (90.76%), Postives = 111/119 (93.28%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. TrEMBL
Match: tr|A0A2P5XHR1|A0A2P5XHR1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA17764 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.8e-36 Identity = 81/119 (68.07%), Postives = 101/119 (84.87%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. TrEMBL
Match: tr|A0A1U8KU42|A0A1U8KU42_GOSHI (Protein DETOXIFICATION OS=Gossypium hirsutum OX=3635 GN=LOC107919259 PE=3 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 6.8e-36 Identity = 81/119 (68.07%), Postives = 99/119 (83.19%), Query Frame = 0
BLAST of CsaV3_3G019490 vs. TrEMBL
Match: tr|A0A0D2VGN0|A0A0D2VGN0_GOSRA (Protein DETOXIFICATION OS=Gossypium raimondii OX=29730 GN=B456_013G170000 PE=3 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 6.8e-36 Identity = 81/119 (68.07%), Postives = 99/119 (83.19%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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