CsaV3_3G019220 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G019220
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionFerredoxin
Locationchr3 : 14992187 .. 14994016 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTATTATTGTATTTTAAAAAAATGGTTTATGAAGGCATTAGTACTCGGTAGCAGCTGTTGTTCACATTTTGAAACCAAATCTTTGGAAGGATAAGAATCCACAACCATTACCATTCGTTGCCAAAAGATAAGGCGTTAACTCACATCCACACGCTCTCTATTTCACTCTCCACGTTATAGCCACACGACCCAAAAATCCTCTTTAAAAAACCCTCTCCACTCTCTCAATTCCATTTCATCTCATCTCATCTCCAATCCAACACAAGAACAATAAGAAAAATGAGCAGCACCACTGCAATCACCTCCCCATTTCCGGCCACCTCCTTCATCCGTCGGAATCCTACCGGTGGAGTGAGTTTCAAGCCATTTCCCAACATGGGTGAGTCTCTGTACGGGCTGAAACACCGCGGCGGACGACTGGCGATGAAGGCATACAAGGTGAAACTCATAACCCCAGATGGAGAGAAAACGGTTGAATGTGATGCTGATCTTTACATTTTGGATGCGGCTGAGGAAAGTGGGCTTGATCTTCCTTACTCTTGCAGAGCTGGGGCTTGTTCTTCATGCGTTGGGAAAGTGGTATCAGGGAAATTGGATCAATCTGATCAGAGTTTTCTTGATGATGAGCAAGTGGCTGAAGGTTGGGTTTTAACTTGTGTTGCTAGGCCTGAGTCTGATCTTGTAATTGAGACTCACAAGGAGGATTCCTTTGCTGGTTAAAACAGAGGAACAAGAAGGGATTAAACTTATTTTTTCTTTTTATCTTTTCTATCTTTGTTGATGAGAGTAAGCATAATGGACATTGTTTTCTTAGCTTGATGATGATGATGATGATGATGATGATATCTCTCTTTTAAAGTGTTTGTTGAAAATTGTATTGTTCATTACTGGTTTAAGTTTATTTACAACTCGGGTTTTGTTTATCTGTTGTTGGGTTCTTAACTTTCATTTCTTTTTGGCTTCTTTACTTTCATGTGAATGATACTGTCTTTTAGCTTCACGTATATCACTTTAGCTCTCCATTGTAAATCATTTTGTTTATTGTTTTATTTATATGTTGTTGGGTGGTTGTTATTTATTTCTCTTTGATATCCAAGTTGTGAATGATACTATAGATTAATCCATCTTTATTTTGGGGAATGGTAAAAAATAGTCCATTTTTTAGGGCAATATATGAGTGAAAAGTTCAATTTACCCTCAACGAAATTTTCCTTCTCTTCACTTAAATCACAACAAACTCAATTTCTTCTTCCACTTGTTATCTTCTTCCTCTAACCTCTTCCAATCGTGGAGGACCAATTTCAATTTGATCTTTTAGGGCTTTCTTCTTCCTAAAGGACATTAAGGAACAAAATATTGCTGACAGACTAAGATGGTGAGGAGAATTGTGGCTTGTTAAGAGGTGAGAGGAAGAAGGAAAGAAGAATTACTTTTCAGTTGTAGTTGCTGTTGACCGTCGTAGGGTGTTGAGTCGTGAGGGGAGAACCAATGCATGCGTGAGATAAATGAAGAGAAAAAGGGAACTTTATACAACTGCTTACACATTGATCCATAGAAGCAATTTTGAGGCGTACTTTCAACAGCCTAAAAATGAATAAAATTAAGTCACCCAATTTTAACAATAAATTTATTTGGTCTTTAATATTTTAAAAGACCCTATTTTTAGTTCTCAATTTTTAAATTTATTATTATTATTTTAACCTGCCATACTAAATAACATATAATAGATTTTTTAAAAATTATATTTCCTCTTCATATTATTTTTAGCTTCAAAATGTGATGTACAACTAAAATTACTTGTACCTTTTGATCCTAAGCTAAGAAAAAC

mRNA sequence

ATGAGCAGCACCACTGCAATCACCTCCCCATTTCCGGCCACCTCCTTCATCCGTCGGAATCCTACCGGTGGAGTGAGTTTCAAGCCATTTCCCAACATGGGTGAGTCTCTGTACGGGCTGAAACACCGCGGCGGACGACTGGCGATGAAGGCATACAAGGTGAAACTCATAACCCCAGATGGAGAGAAAACGGTTGAATGTGATGCTGATCTTTACATTTTGGATGCGGCTGAGGAAAGTGGGCTTGATCTTCCTTACTCTTGCAGAGCTGGGGCTTGTTCTTCATGCGTTGGGAAAGTGGTATCAGGGAAATTGGATCAATCTGATCAGAGTTTTCTTGATGATGAGCAAGTGGCTGAAGGTTGGGTTTTAACTTGTGTTGCTAGGCCTGAGTCTGATCTTGTAATTGAGACTCACAAGGAGGATTCCTTTGCTGGTTAA

Coding sequence (CDS)

ATGAGCAGCACCACTGCAATCACCTCCCCATTTCCGGCCACCTCCTTCATCCGTCGGAATCCTACCGGTGGAGTGAGTTTCAAGCCATTTCCCAACATGGGTGAGTCTCTGTACGGGCTGAAACACCGCGGCGGACGACTGGCGATGAAGGCATACAAGGTGAAACTCATAACCCCAGATGGAGAGAAAACGGTTGAATGTGATGCTGATCTTTACATTTTGGATGCGGCTGAGGAAAGTGGGCTTGATCTTCCTTACTCTTGCAGAGCTGGGGCTTGTTCTTCATGCGTTGGGAAAGTGGTATCAGGGAAATTGGATCAATCTGATCAGAGTTTTCTTGATGATGAGCAAGTGGCTGAAGGTTGGGTTTTAACTTGTGTTGCTAGGCCTGAGTCTGATCTTGTAATTGAGACTCACAAGGAGGATTCCTTTGCTGGTTAA

Protein sequence

MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAEGWVLTCVARPESDLVIETHKEDSFAG
Homology
[Close]
BLAST of CsaV3_3G019220 vs. NCBI nr
Match: XP_004146259.1 (PREDICTED: ferredoxin, leaf L-A-like [Cucumis sativus] >KGN57598.1 hypothetical protein Csa_3G222800 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 3.3e-78
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60
           MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD
Sbjct: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60

Query: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120
           GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE
Sbjct: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120

Query: 121 GWVLTCVARPESDLVIETHKEDSFAG 147
           GWVLTCVARPESDLVIETHKEDSFAG
Sbjct: 121 GWVLTCVARPESDLVIETHKEDSFAG 146

[Close]
BLAST of CsaV3_3G019220 vs. NCBI nr
Match: XP_008456052.1 (PREDICTED: ferredoxin-like [Cucumis melo])

HSP 1 Score: 260.8 bits (665), Expect = 2.9e-66
Identity = 122/146 (83.56%), Postives = 133/146 (91.10%), Query Frame = 0 

Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60
           M STTA TSPFPATSF+RRNPTGGVS KPFPNMGESL+GLKHRGGR+   AY VKLITP+
Sbjct: 1   MGSTTAFTSPFPATSFLRRNPTGGVSLKPFPNMGESLFGLKHRGGRVTAMAYNVKLITPE 60

Query: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120
           GEK++ C  D YILDAAEE+G+DLPYSCRAGACSSC+GKVVSGKLDQSDQSFLDD+QVAE
Sbjct: 61  GEKSITCPDDAYILDAAEENGIDLPYSCRAGACSSCIGKVVSGKLDQSDQSFLDDDQVAE 120

Query: 121 GWVLTCVARPESDLVIETHKEDSFAG 147
           GWVLTCVAR ESD+VIETHKED FAG
Sbjct: 121 GWVLTCVARAESDVVIETHKEDVFAG 146

[Close]
BLAST of CsaV3_3G019220 vs. NCBI nr
Match: XP_022941964.1 (ferredoxin-like [Cucurbita moschata] >XP_022983176.1 ferredoxin-like [Cucurbita maxima] >XP_023547581.1 ferredoxin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223.8 bits (569), Expect = 3.9e-55
Identity = 106/149 (71.14%), Postives = 126/149 (84.56%), Query Frame = 0 

Query: 1   MSSTTAITSPFPATSFIRR-NPTGGVSFKPFPNMGESLYGLK---HRGGRLAMKAYKVKL 60
           M STTA+T+P P TSF+RR  P  GVS +PFPN+G+SL+GLK    RGG + + AYKVKL
Sbjct: 1   MGSTTALTAPIPVTSFLRRQQPVTGVSLRPFPNVGQSLFGLKLGSSRGGSMTVMAYKVKL 60

Query: 61  ITPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDE 120
           ITP+GEK +EC  D YILDAAEESG+DLPYSCRAGACSSC+GK+ SGK+DQSD SFLDD+
Sbjct: 61  ITPEGEKEIECSGDDYILDAAEESGVDLPYSCRAGACSSCIGKLKSGKVDQSDNSFLDDQ 120

Query: 121 QVAEGWVLTCVARPESDLVIETHKEDSFA 146
           Q+ +GWVLTCVARPESD+VIETHKE+ FA
Sbjct: 121 QMEDGWVLTCVARPESDIVIETHKEEVFA 149

[Close]
BLAST of CsaV3_3G019220 vs. NCBI nr
Match: XP_022136604.1 (ferredoxin-like [Momordica charantia])

HSP 1 Score: 218.0 bits (554), Expect = 2.1e-53
Identity = 105/148 (70.95%), Postives = 122/148 (82.43%), Query Frame = 0 

Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK--HRGGRLAMKAYKVKLIT 60
           M STTA++ P PATSF+R  P  G+  +PFPNMG+ ++GLK   RGGR+   AYKV LIT
Sbjct: 1   MGSTTALSGPIPATSFLRGQPAAGL--RPFPNMGQGVFGLKGGSRGGRVRAMAYKVTLIT 60

Query: 61  PDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQV 120
           P GEK+V+C  D YILDAAEE GLDLPYSCRAGACSSCVGKVVSGK+DQSD SFLDD+Q+
Sbjct: 61  PSGEKSVKCPPDSYILDAAEEDGLDLPYSCRAGACSSCVGKVVSGKVDQSDNSFLDDDQM 120

Query: 121 AEGWVLTCVARPESDLVIETHKEDSFAG 147
           AEGWVLTCVA P+SD+VIETHKE  F+G
Sbjct: 121 AEGWVLTCVAYPQSDVVIETHKEGEFSG 146

[Close]
BLAST of CsaV3_3G019220 vs. NCBI nr
Match: PON46312.1 (Ferredoxin [2Fe-2S] [Parasponia andersonii])

HSP 1 Score: 191.4 bits (485), Expect = 2.1e-45
Identity = 93/148 (62.84%), Postives = 119/148 (80.41%), Query Frame = 0 

Query: 2   SSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK---HRGGRL-AMKAYKVKLI 61
           ++  A++S   +TSF+RR PT   S +  PN+G++L+GLK   +RGGR+ AM AYKVKLI
Sbjct: 3   ATAAALSSTMVSTSFVRRQPT-TTSLRALPNVGQALFGLKATPNRGGRVTAMAAYKVKLI 62

Query: 62  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 121
           TP+GE   EC  D+Y+LD AEE+G+DLPYSCRAG+CSSCVGKVV G++DQSD SFLDD+Q
Sbjct: 63  TPEGEVEFECPDDVYVLDQAEENGIDLPYSCRAGSCSSCVGKVVKGEVDQSDNSFLDDDQ 122

Query: 122 VAEGWVLTCVARPESDLVIETHKEDSFA 146
           +A GWVLTCVA P+SD+VIETHKE+  A
Sbjct: 123 LAGGWVLTCVAYPQSDVVIETHKEEELA 149

[Close]
BLAST of CsaV3_3G019220 vs. TAIR10
Match: AT1G10960.1 (ferredoxin 1)

HSP 1 Score: 184.1 bits (466), Expect = 6.2e-47
Identity = 94/146 (64.38%), Postives = 118/146 (80.82%), Query Frame = 0 

Query: 3   STTAITSPFPATSFIRRNPTG-GVSFKPFPNMGESLYGLKH---RGGRL-AMKAYKVKLI 62
           ++TA++S   +TSF+RR  T   +   PF N  +SL+GLK    RGGR+ AM  YKVK I
Sbjct: 2   ASTALSSAIVSTSFLRRQQTPISLRSLPFANT-QSLFGLKSSTARGGRVTAMATYKVKFI 61

Query: 63  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 122
           TP+GE+ VEC+ D+Y+LDAAEE+GLDLPYSCRAG+CSSC GKVVSG +DQSDQSFLDDEQ
Sbjct: 62  TPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQ 121

Query: 123 VAEGWVLTCVARPESDLVIETHKEDS 144
           ++EG+VLTCVA P SD+VIETHKE++
Sbjct: 122 MSEGYVLTCVAYPTSDVVIETHKEEA 146

[Close]
BLAST of CsaV3_3G019220 vs. TAIR10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 181.8 bits (460), Expect = 3.1e-46
Identity = 92/145 (63.45%), Postives = 114/145 (78.62%), Query Frame = 0 

Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMG-ESLYGLKH---RGGRL-AMKAYKVKLI 62
           ++TA++S    TSFIRR+P   +S +  P+   +SL+GLK    RGGR+ AM  YKVK I
Sbjct: 2   ASTALSSAIVGTSFIRRSP-APISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFI 61

Query: 63  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 122
           TP+GE  VECD D+Y+LDAAEE+G+DLPYSCRAG+CSSC GKVVSG +DQSDQSFLDDEQ
Sbjct: 62  TPEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQ 121

Query: 123 VAEGWVLTCVARPESDLVIETHKED 143
           + EG+VLTC A P SD+ IETHKE+
Sbjct: 122 IGEGFVLTCAAYPTSDVTIETHKEE 145

[Close]
BLAST of CsaV3_3G019220 vs. TAIR10
Match: AT2G27510.1 (ferredoxin 3)

HSP 1 Score: 134.0 bits (336), Expect = 7.3e-32
Identity = 66/108 (61.11%), Postives = 80/108 (74.07%), Query Frame = 0 

Query: 38  YGLK---HRGGRLAMKAYKVKLITPDG-EKTVECDADLYILDAAEESGLDLPYSCRAGAC 97
           +GLK   + GG      YKVKL+ PDG E   E   D YILDAAEE+G+DLPYSCRAGAC
Sbjct: 44  FGLKCSANSGGATMSAVYKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGAC 103

Query: 98  SSCVGKVVSGKLDQSDQSFLDDEQVAEGWVLTCVARPESDLVIETHKE 142
           S+C G++VSG +DQSD SFL+D  + +G+VLTCVA P+SD VI THKE
Sbjct: 104 STCAGQIVSGNVDQSDGSFLEDSHLEKGYVLTCVAYPQSDCVIHTHKE 151

[Close]
BLAST of CsaV3_3G019220 vs. TAIR10
Match: AT5G10000.1 (ferredoxin 4)

HSP 1 Score: 114.0 bits (284), Expect = 7.8e-26
Identity = 52/99 (52.53%), Postives = 76/99 (76.77%), Query Frame = 0 

Query: 44  GGRLAMKAYKVKLITPDG-EKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVS 103
           G   A ++ KVKLI+P+G E+ +E + D  IL++AE +GL+LPYSCR+G C +C GK+VS
Sbjct: 46  GKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVS 105

Query: 104 GKLDQSDQSFLDDEQVAEGWVLTCVARPESDLVIETHKE 142
           GK+DQS  SFL++EQ+ +G++LTC+A P  D V+ THK+
Sbjct: 106 GKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQ 144

[Close]
BLAST of CsaV3_3G019220 vs. TAIR10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein)

HSP 1 Score: 76.3 bits (186), Expect = 1.8e-14
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 0 

Query: 45  GRLAMKAYKVKLITPDGEKT-VECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSG 104
           GR+  +AYKV ++  DG+ T +E + D  IL  A +SGLD+PY C  G C +C  K+V+G
Sbjct: 46  GRIIARAYKV-VVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTG 105

Query: 105 KLDQSDQSFLDDEQVAEGWVLTCVARPESDLVIETHKED 143
            +DQS    L D+ V  G+ L C + P SD  I+   E+
Sbjct: 106 TVDQSG-GMLSDDVVERGYTLLCASYPTSDCHIKMIPEE 142

[Close]
BLAST of CsaV3_3G019220 vs. Swiss-Prot
Match: sp|O04090|FER1_ARATH (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.1e-45
Identity = 94/146 (64.38%), Postives = 118/146 (80.82%), Query Frame = 0 

Query: 3   STTAITSPFPATSFIRRNPTG-GVSFKPFPNMGESLYGLKH---RGGRL-AMKAYKVKLI 62
           ++TA++S   +TSF+RR  T   +   PF N  +SL+GLK    RGGR+ AM  YKVK I
Sbjct: 2   ASTALSSAIVSTSFLRRQQTPISLRSLPFANT-QSLFGLKSSTARGGRVTAMATYKVKFI 61

Query: 63  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 122
           TP+GE+ VEC+ D+Y+LDAAEE+GLDLPYSCRAG+CSSC GKVVSG +DQSDQSFLDDEQ
Sbjct: 62  TPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQ 121

Query: 123 VAEGWVLTCVARPESDLVIETHKEDS 144
           ++EG+VLTCVA P SD+VIETHKE++
Sbjct: 122 MSEGYVLTCVAYPTSDVVIETHKEEA 146

[Close]
BLAST of CsaV3_3G019220 vs. Swiss-Prot
Match: sp|P16972|FER2_ARATH (Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD2 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.5e-45
Identity = 92/145 (63.45%), Postives = 114/145 (78.62%), Query Frame = 0 

Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMG-ESLYGLKH---RGGRL-AMKAYKVKLI 62
           ++TA++S    TSFIRR+P   +S +  P+   +SL+GLK    RGGR+ AM  YKVK I
Sbjct: 2   ASTALSSAIVGTSFIRRSP-APISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFI 61

Query: 63  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 122
           TP+GE  VECD D+Y+LDAAEE+G+DLPYSCRAG+CSSC GKVVSG +DQSDQSFLDDEQ
Sbjct: 62  TPEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQ 121

Query: 123 VAEGWVLTCVARPESDLVIETHKED 143
           + EG+VLTC A P SD+ IETHKE+
Sbjct: 122 IGEGFVLTCAAYPTSDVTIETHKEE 145

[Close]
BLAST of CsaV3_3G019220 vs. Swiss-Prot
Match: sp|Q9ZTS2|FER_CAPAN (Ferredoxin, chloroplastic OS=Capsicum annuum OX=4072 GN=AP1 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 4.8e-41
Identity = 81/143 (56.64%), Postives = 106/143 (74.13%), Query Frame = 0 

Query: 6   AITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKH-RGGRL-AMKAYKVKLITPDGEK 65
           ++++   +TSF+ R P    S KP PN+GE+L+GLK   GG++  M +YKVKLITPDG  
Sbjct: 3   SVSATMISTSFMPRKP-AVTSLKPIPNVGEALFGLKSANGGKVTCMASYKVKLITPDGPI 62

Query: 66  TVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAEGWV 125
             +C  ++YILD AEE+G DLPYSCRAG+CSSC GK+  G +DQ+D +FLDD+Q+ EGWV
Sbjct: 63  EFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWV 122

Query: 126 LTCVARPESDLVIETHKEDSFAG 147
           LTCVA P+SD+ IETHKE    G
Sbjct: 123 LTCVAYPQSDVTIETHKEAELVG 144

[Close]
BLAST of CsaV3_3G019220 vs. Swiss-Prot
Match: sp|O04683|FER1_MESCR (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.0e-38
Identity = 78/144 (54.17%), Postives = 104/144 (72.22%), Query Frame = 0 

Query: 2   SSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK---HRGGRLAMKAYKVKLIT 61
           ++T A++    +T+F  + P    +     N+G +L+GLK    RG   AM AYKV L+T
Sbjct: 3   ATTAALSGATMSTAFAPKTPPMTAALP--TNVGRALFGLKSSASRGRVTAMAAYKVTLVT 62

Query: 62  PDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQV 121
           P+G++ +EC  D+YILDAAEE+G+DLPYSCRAG+CSSC GKV SG ++Q D SFLDD+Q+
Sbjct: 63  PEGKQELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQI 122

Query: 122 AEGWVLTCVARPESDLVIETHKED 143
            EGWVLTCVA P  D+ IETHKE+
Sbjct: 123 KEGWVLTCVAYPTGDVTIETHKEE 144

[Close]
BLAST of CsaV3_3G019220 vs. Swiss-Prot
Match: sp|P00221|FER1_SPIOL (Ferredoxin-1, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETF PE=1 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 1.3e-38
Identity = 79/142 (55.63%), Postives = 98/142 (69.01%), Query Frame = 0 

Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK--HRGGRLAMKAYKVKLITPD 62
           + T  T    AT+F+ +     +      N G SL+GLK   RGGR+ M AYKV L+TP 
Sbjct: 2   AATTTTMMGMATTFVPKPQAPPMMAALPSNTGRSLFGLKTGSRGGRMTMAAYKVTLVTPT 61

Query: 63  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 122
           G    +C  D+YILDAAEE G+DLPYSCRAG+CSSC GK+ +G L+Q DQSFLDD+Q+ E
Sbjct: 62  GNVEFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDE 121

Query: 123 GWVLTCVARPESDLVIETHKED 143
           GWVLTC A P SD+ IETHKE+
Sbjct: 122 GWVLTCAAYPVSDVTIETHKEE 143

[Close]
BLAST of CsaV3_3G019220 vs. TrEMBL
Match: tr|A0A0A0L764|A0A0A0L764_CUCSA (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G222800 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 2.2e-78
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60
           MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD
Sbjct: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60

Query: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120
           GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE
Sbjct: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120

Query: 121 GWVLTCVARPESDLVIETHKEDSFAG 147
           GWVLTCVARPESDLVIETHKEDSFAG
Sbjct: 121 GWVLTCVARPESDLVIETHKEDSFAG 146

[Close]
BLAST of CsaV3_3G019220 vs. TrEMBL
Match: tr|A0A1S3C1X0|A0A1S3C1X0_CUCME (Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103496100 PE=3 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.9e-66
Identity = 122/146 (83.56%), Postives = 133/146 (91.10%), Query Frame = 0 

Query: 1   MSSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLKHRGGRLAMKAYKVKLITPD 60
           M STTA TSPFPATSF+RRNPTGGVS KPFPNMGESL+GLKHRGGR+   AY VKLITP+
Sbjct: 1   MGSTTAFTSPFPATSFLRRNPTGGVSLKPFPNMGESLFGLKHRGGRVTAMAYNVKLITPE 60

Query: 61  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 120
           GEK++ C  D YILDAAEE+G+DLPYSCRAGACSSC+GKVVSGKLDQSDQSFLDD+QVAE
Sbjct: 61  GEKSITCPDDAYILDAAEENGIDLPYSCRAGACSSCIGKVVSGKLDQSDQSFLDDDQVAE 120

Query: 121 GWVLTCVARPESDLVIETHKEDSFAG 147
           GWVLTCVAR ESD+VIETHKED FAG
Sbjct: 121 GWVLTCVARAESDVVIETHKEDVFAG 146

[Close]
BLAST of CsaV3_3G019220 vs. TrEMBL
Match: tr|A0A2P5BC06|A0A2P5BC06_PARAD (Ferredoxin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_252590 PE=3 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.4e-45
Identity = 93/148 (62.84%), Postives = 119/148 (80.41%), Query Frame = 0 

Query: 2   SSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK---HRGGRL-AMKAYKVKLI 61
           ++  A++S   +TSF+RR PT   S +  PN+G++L+GLK   +RGGR+ AM AYKVKLI
Sbjct: 3   ATAAALSSTMVSTSFVRRQPT-TTSLRALPNVGQALFGLKATPNRGGRVTAMAAYKVKLI 62

Query: 62  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 121
           TP+GE   EC  D+Y+LD AEE+G+DLPYSCRAG+CSSCVGKVV G++DQSD SFLDD+Q
Sbjct: 63  TPEGEVEFECPDDVYVLDQAEENGIDLPYSCRAGSCSSCVGKVVKGEVDQSDNSFLDDDQ 122

Query: 122 VAEGWVLTCVARPESDLVIETHKEDSFA 146
           +A GWVLTCVA P+SD+VIETHKE+  A
Sbjct: 123 LAGGWVLTCVAYPQSDVVIETHKEEELA 149

[Close]
BLAST of CsaV3_3G019220 vs. TrEMBL
Match: tr|A0A067L2U1|A0A067L2U1_JATCU (Ferredoxin OS=Jatropha curcas OX=180498 GN=JCGZ_04972 PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.1e-45
Identity = 92/142 (64.79%), Postives = 116/142 (81.69%), Query Frame = 0 

Query: 3   STTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK-HRGGRL-AMKAYKVKLITPD 62
           ++TA++S   +TSF RR P    S +  PN+G++L+GLK  RGG+  AM +YKVKL+TP+
Sbjct: 2   ASTALSSAMVSTSFTRRQPV--TSLRALPNVGQALFGLKSSRGGKFKAMASYKVKLLTPE 61

Query: 63  GEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQVAE 122
           GEK +EC  D+YILDAAEE+G+DLPYSCRAG+CSSC GKVV G++DQSD SFLDDEQ+ E
Sbjct: 62  GEKVIECPDDVYILDAAEEAGVDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQMEE 121

Query: 123 GWVLTCVARPESDLVIETHKED 143
           GWVLTCVA P SD+VIETHKE+
Sbjct: 122 GWVLTCVAYPTSDVVIETHKEE 141

[Close]
BLAST of CsaV3_3G019220 vs. TrEMBL
Match: tr|A0A2P5BHJ1|A0A2P5BHJ1_9ROSA (Ferredoxin OS=Trema orientalis OX=63057 GN=TorRG33x02_320950 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.1e-45
Identity = 93/148 (62.84%), Postives = 117/148 (79.05%), Query Frame = 0 

Query: 2   SSTTAITSPFPATSFIRRNPTGGVSFKPFPNMGESLYGLK---HRGGRL-AMKAYKVKLI 61
           ++  A++S   +TSF+RR PT   S +  PN+G++L+GLK    RGGR+ AM AYKVKL+
Sbjct: 3   ATAAALSSAMVSTSFVRRQPT-TTSLRALPNVGQALFGLKATPSRGGRVTAMAAYKVKLL 62

Query: 62  TPDGEKTVECDADLYILDAAEESGLDLPYSCRAGACSSCVGKVVSGKLDQSDQSFLDDEQ 121
           TP+GE   EC  D+Y+LD AEE G+DLPYSCRAG+CSSCVGKVV G++DQSD SFLDD+Q
Sbjct: 63  TPEGEVEFECPDDVYVLDQAEEVGIDLPYSCRAGSCSSCVGKVVKGEVDQSDNSFLDDDQ 122

Query: 122 VAEGWVLTCVARPESDLVIETHKEDSFA 146
           VA GWVLTCVA P+SD+VIETHKE+  A
Sbjct: 123 VAGGWVLTCVAYPQSDVVIETHKEEELA 149

The following BLAST results are available for this feature:
BLAST of CsaV3_3G019220 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146259.13.3e-78100.00PREDICTED: ferredoxin, leaf L-A-like [Cucumis sativus] >KGN57598.1 hypothetical ... [more]
XP_008456052.12.9e-6683.56PREDICTED: ferredoxin-like [Cucumis melo][more]
XP_022941964.13.9e-5571.14ferredoxin-like [Cucurbita moschata] >XP_022983176.1 ferredoxin-like [Cucurbita ... [more]
XP_022136604.12.1e-5370.95ferredoxin-like [Momordica charantia][more]
PON46312.12.1e-4562.84Ferredoxin [2Fe-2S] [Parasponia andersonii][more]
BLAST of CsaV3_3G019220 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10960.16.2e-4764.38ferredoxin 1[more]
AT1G60950.13.1e-4663.452Fe-2S ferredoxin-like superfamily protein[more]
AT2G27510.17.3e-3261.11ferredoxin 3[more]
AT5G10000.17.8e-2652.53ferredoxin 4[more]
AT4G14890.11.8e-1441.412Fe-2S ferredoxin-like superfamily protein[more]
BLAST of CsaV3_3G019220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O04090|FER1_ARATH1.1e-4564.38Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1[more]
sp|P16972|FER2_ARATH5.5e-4563.45Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD2 PE=1 SV=1[more]
sp|Q9ZTS2|FER_CAPAN4.8e-4156.64Ferredoxin, chloroplastic OS=Capsicum annuum OX=4072 GN=AP1 PE=1 SV=1[more]
sp|O04683|FER1_MESCR1.0e-3854.17Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1[more]
sp|P00221|FER1_SPIOL1.3e-3855.63Ferredoxin-1, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETF PE=1 SV=2[more]
BLAST of CsaV3_3G019220 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L764|A0A0A0L764_CUCSA2.2e-78100.00Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G222800 PE=3 SV=1[more]
tr|A0A1S3C1X0|A0A1S3C1X0_CUCME1.9e-6683.56Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103496100 PE=3 SV=1[more]
tr|A0A2P5BC06|A0A2P5BC06_PARAD1.4e-4562.84Ferredoxin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_252590 PE=3 SV=1[more]
tr|A0A067L2U1|A0A067L2U1_JATCU3.1e-4564.79Ferredoxin OS=Jatropha curcas OX=180498 GN=JCGZ_04972 PE=3 SV=1[more]
tr|A0A2P5BHJ1|A0A2P5BHJ1_9ROSA4.1e-4562.84Ferredoxin OS=Trema orientalis OX=63057 GN=TorRG33x02_320950 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:00515372 iron, 2 sulfur cluster binding
GO:0051536iron-sulfur cluster binding
GO:0009055electron carrier activity
Vocabulary: Biological Process
TermDefinition
GO:0022900electron transport chain
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf
IPR0060582Fe2S_fd_BS
IPR010241Fd_pln
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
cellular_component GO:0005575 cellular_component
molecular_function GO:0051537 2 iron, 2 sulfur cluster binding
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0051536 iron-sulfur cluster binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G019220.1CsaV3_3G019220.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012675Beta-grasp domain superfamilyGENE3DG3DSA:3.10.20.30coord: 49..145
e-value: 8.9E-35
score: 120.5
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 58..130
e-value: 6.0E-20
score: 70.9
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPROSITEPS510852FE2S_FER_2coord: 52..142
score: 13.488
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainCDDcd00207fer2coord: 54..137
e-value: 1.44005E-34
score: 116.726
IPR010241Ferredoxin [2Fe-2S], plantTIGRFAMTIGR02008TIGR02008coord: 51..143
e-value: 7.2E-47
score: 155.1
NoneNo IPR availablePANTHERPTHR43112:SF4FERREDOXIN-3, CHLOROPLASTIC-RELATEDcoord: 38..143
NoneNo IPR availablePANTHERPTHR43112FAMILY NOT NAMEDcoord: 38..143
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 88..96
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILYSSF542922Fe-2S ferredoxin-likecoord: 48..143

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G019220Wax gourdcucwgoB287
CsaV3_3G019220Silver-seed gourdcarcucB0048
CsaV3_3G019220Silver-seed gourdcarcucB0687
CsaV3_3G019220Cucumber (Gy14) v2cgybcucB117
CsaV3_3G019220Cucumber (Gy14) v1cgycucB006
CsaV3_3G019220Cucurbita maxima (Rimu)cmacucB0373
CsaV3_3G019220Cucurbita maxima (Rimu)cmacucB0829
CsaV3_3G019220Cucurbita moschata (Rifu)cmocucB0370
CsaV3_3G019220Cucurbita moschata (Rifu)cmocucB0814
CsaV3_3G019220Cucurbita pepo (Zucchini)cpecucB0247
CsaV3_3G019220Cucurbita pepo (Zucchini)cpecucB0484
CsaV3_3G019220Wild cucumber (PI 183967)cpicucB144
CsaV3_3G019220Bottle gourd (USVL1VR-Ls)cuclsiB230
CsaV3_3G019220Melon (DHL92) v3.5.1cucmeB247
CsaV3_3G019220Melon (DHL92) v3.6.1cucmedB246
CsaV3_3G019220Watermelon (Charleston Gray)cucwcgB238
CsaV3_3G019220Watermelon (97103) v1cucwmB252
CsaV3_3G019220Watermelon (97103) v2cucwmbB217