CsaV3_3G019130 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G019130
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 14835989 .. 14836525 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTTAAGCTATACTCACGTATGCATGTGGAATTAATCTATTTCAAGATGTCATGCACAATACACGATTTAAAGTACAATTATAAAATTCTTGTGTGTGGTTTTTTAATTTTTTTGAAATGTTCTTCAACAAGAGAACAAATCAACAAACAAGCGGACTTCAATAGACAACAATAAAATTTCTGGAAAAGACTAAAACTTTTAGGGGAAAAACCTTCTCTTTTATTCCTAGAAAAAGGAAACAACCTTTTATACATGATGTTGTTCCTCCGTTCTGCGCGTCAGCCGCCCTCGTTCGCGTCGGTTTTCCCCTGTTCGTCCGATCGAGTCGCCCACCTGAGCCATCTAGTCAGTTCCTCCTCGCGTGAAGCTTCTGTCTTGATTCCATACGAGCTGACCCATCACTTCCCGAGTCGTTTCAGCCGCGCTCCTTCCCTTCTGGTCGAGGAACCAACTAGTTTCCTGCTGTAGCCATTTGAGTCATTTGTGGTCAAGAGTTTTGATTGGGTGTTGGCTCGAAAATAAATTTAAAACTTTG

mRNA sequence

ATGATGTTGTTCCTCCGTTCTGCGCGTCAGCCGCCCTCGTTCGCGTCGGTTTTCCCCTGTTCGTCCGATCGAGTCGCCCACCTGAGCCATCTAGTCAGTTCCTCCTCGCGTGAAGCTTCTGTCTTGATTCCATACGAGCTGACCCATCACTTCCCGAGTCGTTTCAGCCGCGCTCCTTCCCTTCTGGTCGAGGAACCAACTAGTTTCCTGCTGTAG

Coding sequence (CDS)

ATGATGTTGTTCCTCCGTTCTGCGCGTCAGCCGCCCTCGTTCGCGTCGGTTTTCCCCTGTTCGTCCGATCGAGTCGCCCACCTGAGCCATCTAGTCAGTTCCTCCTCGCGTGAAGCTTCTGTCTTGATTCCATACGAGCTGACCCATCACTTCCCGAGTCGTTTCAGCCGCGCTCCTTCCCTTCTGGTCGAGGAACCAACTAGTTTCCTGCTGTAG

Protein sequence

MMLFLRSARQPPSFASVFPCSSDRVAHLSHLVSSSSREASVLIPYELTHHFPSRFSRAPSLLVEEPTSFLL
Homology
[Close]
BLAST of CsaV3_3G019130 vs. NCBI nr
Match: KGN57587.1 (hypothetical protein Csa_3G219220 [Cucumis sativus])

HSP 1 Score: 141.0 bits (354), Expect = 1.6e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MMLFLRSARQPPSFASVFPCSSDRVAHLSHLVSSSSREASVLIPYELTHHFPSRFSRAPS 60
          MMLFLRSARQPPSFASVFPCSSDRVAHLSHLVSSSSREASVLIPYELTHHFPSRFSRAPS
Sbjct: 1  MMLFLRSARQPPSFASVFPCSSDRVAHLSHLVSSSSREASVLIPYELTHHFPSRFSRAPS 60

Query: 61 LLVEEPTSFLL 72
          LLVEEPTSFLL
Sbjct: 61 LLVEEPTSFLL 71

[Close]
BLAST of CsaV3_3G019130 vs. TrEMBL
Match: tr|A0A0A0LAC8|A0A0A0LAC8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G219220 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-30
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0 

Query: 1  MMLFLRSARQPPSFASVFPCSSDRVAHLSHLVSSSSREASVLIPYELTHHFPSRFSRAPS 60
          MMLFLRSARQPPSFASVFPCSSDRVAHLSHLVSSSSREASVLIPYELTHHFPSRFSRAPS
Sbjct: 1  MMLFLRSARQPPSFASVFPCSSDRVAHLSHLVSSSSREASVLIPYELTHHFPSRFSRAPS 60

Query: 61 LLVEEPTSFLL 72
          LLVEEPTSFLL
Sbjct: 61 LLVEEPTSFLL 71

The following BLAST results are available for this feature:
BLAST of CsaV3_3G019130 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57587.11.6e-30100.00hypothetical protein Csa_3G219220 [Cucumis sativus][more]
BLAST of CsaV3_3G019130 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G019130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G019130 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LAC8|A0A0A0LAC8_CUCSA1.1e-30100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G219220 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G019130.1CsaV3_3G019130.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G019130Silver-seed gourdcarcucB0070
CsaV3_3G019130Silver-seed gourdcarcucB0071
CsaV3_3G019130Silver-seed gourdcarcucB0687
CsaV3_3G019130Cucumber (Gy14) v2cgybcucB117
CsaV3_3G019130Cucumber (Gy14) v1cgycucB006
CsaV3_3G019130Cucurbita maxima (Rimu)cmacucB0373
CsaV3_3G019130Cucurbita maxima (Rimu)cmacucB0829
CsaV3_3G019130Cucurbita moschata (Rifu)cmocucB0370
CsaV3_3G019130Cucurbita moschata (Rifu)cmocucB0814
CsaV3_3G019130Cucurbita pepo (Zucchini)cpecucB0247
CsaV3_3G019130Cucurbita pepo (Zucchini)cpecucB0484
CsaV3_3G019130Wild cucumber (PI 183967)cpicucB144
CsaV3_3G019130Bottle gourd (USVL1VR-Ls)cuclsiB230
CsaV3_3G019130Melon (DHL92) v3.5.1cucmeB247
CsaV3_3G019130Melon (DHL92) v3.6.1cucmedB246
CsaV3_3G019130Watermelon (Charleston Gray)cucwcgB238
CsaV3_3G019130Watermelon (97103) v1cucwmB252
CsaV3_3G019130Watermelon (97103) v2cucwmbB217
CsaV3_3G019130Wax gourdcucwgoB287