CsaV3_3G019090 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G019090
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
Descriptionnigrin b-like
Locationchr3 : 14778519 .. 14779385 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAAATTGTGTTGAGCATTGTTGTAGCCTTCTCTCTCACCACCCATCTTGCCATGGCAGTGCCCTCCGACTATGGATATCAAGTCGTCCCTGGAGCCACACATCTTGTGGGTCGAGATGGATTGTGTTTGGAGATGTCTCCATGGTTTTACAAAGGTAGTAATTTTCCAACTCGATTATCACCCTGCAACGAACAAAAGAAACAAACTCAGTTATGGACTGTTCTCCAAGATGAAACGATTCGACCAATGAATGATAGATATTGCTTGGTTTCTTACGTCTCTGTTAACTTCATAACCAATGTGGTAGTAAGCGAGTGTGCTAAAGAGCCACATTCTAATAAGAAATGGATCCATAAGGAGGACAGAACCATAGTCCATGTTGGGTCAGGAATGGTTCTAACAGGAAATTCAAACTATGTGACAGTACAAAGGAACAAAAATGCACCATCACAAAGCTGGGAAGCAACAAAAAGTTTAACCCCAATGGTTGCAAACATAAAATGGCTTGAAAACTTGTGTTTGCAATCGACGAAAGATTCGAATTATGTACAGTTGGATGGATGTAATAGTGAAAATAAGAGCCAACATTGGTCATTGTATGGAGATGGAACCATTAGAAAACATGTGAATAGAAACTATTGCTTGACTTCTGAACAAGATTTTGGTCGTTTTGTAGCTGTGTCTAAATGTGAAGACAAACCACAACAACGTTGGGGTCTTGGTGCTGAAGACAATACAATTAACCATCCCAATACTGACATGGTCATGGATGTGCTTAGTGTGCCTTTTGATGATCTTCCATTAGCGGTCGTTACAAACCACCGTGATGGAACTGCTACCCAACGATGGATTATTTACTAA

mRNA sequence

ATGAAAGAAATTGTGTTGAGCATTGTTGTAGCCTTCTCTCTCACCACCCATCTTGCCATGGCAGTGCCCTCCGACTATGGATATCAAGTCGTCCCTGGAGCCACACATCTTGTGGGTCGAGATGGATTGTGTTTGGAGATGTCTCCATGGTTTTACAAAGGTAGTAATTTTCCAACTCGATTATCACCCTGCAACGAACAAAAGAAACAAACTCAGTTATGGACTGTTCTCCAAGATGAAACGATTCGACCAATGAATGATAGATATTGCTTGGTTTCTTACGTCTCTGTTAACTTCATAACCAATGTGGTAGTAAGCGAGTGTGCTAAAGAGCCACATTCTAATAAGAAATGGATCCATAAGGAGGACAGAACCATAGTCCATGTTGGGTCAGGAATGGTTCTAACAGGAAATTCAAACTATGTGACAGTACAAAGGAACAAAAATGCACCATCACAAAGCTGGGAAGCAACAAAAAGTTTAACCCCAATGGTTGCAAACATAAAATGGCTTGAAAACTTGTGTTTGCAATCGACGAAAGATTCGAATTATGTACAGTTGGATGGATGTAATAGTGAAAATAAGAGCCAACATTGGTCATTGTATGGAGATGGAACCATTAGAAAACATGTGAATAGAAACTATTGCTTGACTTCTGAACAAGATTTTGGTCGTTTTGTAGCTGTGTCTAAATGTGAAGACAAACCACAACAACGTTGGGGTCTTGGTGCTGAAGACAATACAATTAACCATCCCAATACTGACATGGTCATGGATGTGCTTAGTGTGCCTTTTGATGATCTTCCATTAGCGGTCGTTACAAACCACCGTGATGGAACTGCTACCCAACGATGGATTATTTACTAA

Coding sequence (CDS)

ATGAAAGAAATTGTGTTGAGCATTGTTGTAGCCTTCTCTCTCACCACCCATCTTGCCATGGCAGTGCCCTCCGACTATGGATATCAAGTCGTCCCTGGAGCCACACATCTTGTGGGTCGAGATGGATTGTGTTTGGAGATGTCTCCATGGTTTTACAAAGGTAGTAATTTTCCAACTCGATTATCACCCTGCAACGAACAAAAGAAACAAACTCAGTTATGGACTGTTCTCCAAGATGAAACGATTCGACCAATGAATGATAGATATTGCTTGGTTTCTTACGTCTCTGTTAACTTCATAACCAATGTGGTAGTAAGCGAGTGTGCTAAAGAGCCACATTCTAATAAGAAATGGATCCATAAGGAGGACAGAACCATAGTCCATGTTGGGTCAGGAATGGTTCTAACAGGAAATTCAAACTATGTGACAGTACAAAGGAACAAAAATGCACCATCACAAAGCTGGGAAGCAACAAAAAGTTTAACCCCAATGGTTGCAAACATAAAATGGCTTGAAAACTTGTGTTTGCAATCGACGAAAGATTCGAATTATGTACAGTTGGATGGATGTAATAGTGAAAATAAGAGCCAACATTGGTCATTGTATGGAGATGGAACCATTAGAAAACATGTGAATAGAAACTATTGCTTGACTTCTGAACAAGATTTTGGTCGTTTTGTAGCTGTGTCTAAATGTGAAGACAAACCACAACAACGTTGGGGTCTTGGTGCTGAAGACAATACAATTAACCATCCCAATACTGACATGGTCATGGATGTGCTTAGTGTGCCTTTTGATGATCTTCCATTAGCGGTCGTTACAAACCACCGTGATGGAACTGCTACCCAACGATGGATTATTTACTAA

Protein sequence

MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSNKKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLCLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDKPQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWIIY
BLAST of CsaV3_3G019090 vs. NCBI nr
Match: XP_004146289.1 (PREDICTED: nigrin b-like [Cucumis sativus] >KGN57583.1 hypothetical protein Csa_3G219180 [Cucumis sativus])

HSP 1 Score: 607.1 bits (1564), Expect = 3.2e-170
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR 60
           MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR
Sbjct: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR 60

Query: 61  LSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSNKKWIH 120
           LSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSNKKWIH
Sbjct: 61  LSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSNKKWIH 120

Query: 121 KEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLCLQSTK 180
           KEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLCLQSTK
Sbjct: 121 KEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLCLQSTK 180

Query: 181 DSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDKPQQRW 240
           DSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDKPQQRW
Sbjct: 181 DSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDKPQQRW 240

Query: 241 GLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWIIY 289
           GLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWIIY
Sbjct: 241 GLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWIIY 288

BLAST of CsaV3_3G019090 vs. NCBI nr
Match: XP_016901886.1 (PREDICTED: nigrin b-like [Cucumis melo])

HSP 1 Score: 458.4 bits (1178), Expect = 1.8e-125
Identity = 215/291 (73.88%), Postives = 249/291 (85.57%), Query Frame = 0

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYG----YQVVPGATHLVGRDGLCLEMSPWFYKGSN 60
           MKEIVLSI+VAFSLTTHLAMAVPS+YG    Y  VP ATHLVGRDGLCLEMSPWFY+G+N
Sbjct: 1   MKEIVLSIIVAFSLTTHLAMAVPSNYGYGGEYGGVPRATHLVGRDGLCLEMSPWFYRGNN 60

Query: 61  FPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSNK 120
           FPTRLSPC+E KKQTQLWTV+ D TIRPMND++CLV+ V V  I   VV ECAKEP+SNK
Sbjct: 61  FPTRLSPCDEHKKQTQLWTVVGDGTIRPMNDKFCLVADVLVGLINKAVVRECAKEPNSNK 120

Query: 121 KWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLCL 180
           +W HK+D TI HV SGMVLTG+S+YVT+Q NKN PSQSWEAT+S TPM+ANI+WL NLCL
Sbjct: 121 RWTHKKDGTITHVESGMVLTGDSDYVTLQSNKNTPSQSWEATESSTPMIANIEWLNNLCL 180

Query: 181 QSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDKP 240
           QST DSN+V L+GCN ENK Q W+LYGDGTIR++VNRNYCLTS++  GRF+ +SKCEDKP
Sbjct: 181 QSTDDSNHVGLNGCNRENKDQRWALYGDGTIRQNVNRNYCLTSDEYLGRFIVMSKCEDKP 240

Query: 241 QQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWII 288
           QQRW LGA+D+TI+HPN+DMVMDVL VP+ D   AVVTN RDG+A+QRW I
Sbjct: 241 QQRWNLGAKDSTIDHPNSDMVMDVLFVPYYDFSSAVVTNRRDGSASQRWTI 291

BLAST of CsaV3_3G019090 vs. NCBI nr
Match: NP_001274403.1 (uncharacterized protein LOC101221335 precursor [Cucumis sativus] >BAA88294.1 XSP30 [Cucumis sativus])

HSP 1 Score: 409.5 bits (1051), Expect = 9.8e-111
Identity = 200/292 (68.49%), Postives = 230/292 (78.77%), Query Frame = 0

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEMSPWFY-KGS 60
           MKEIVLSI+VAFSLTT LA+AVP +YGY V    VPGATHLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  NFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSN 120
           NFPTRLSPC+E KKQTQLWT++ D TIRPMND++CL + V    I   VVSEC K    N
Sbjct: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPN 120

Query: 121 KKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLC 180
           KKW  K D TI  V S MVLTG+ +YVT+Q NK  PSQSWE T+SL  MVANI+WL NLC
Sbjct: 121 KKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLC 180

Query: 181 LQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDK 240
           LQST DS++V L+GCN++NK Q W+LY DGTIR+HVN+NYCLTS+QDFGRFV VSKCEDK
Sbjct: 181 LQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDK 240

Query: 241 PQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWII 288
           PQQRW L A+D TI+HPNTDMV+DV SVP    P  +VTN RDG+A+QRW I
Sbjct: 241 PQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

BLAST of CsaV3_3G019090 vs. NCBI nr
Match: KGN57579.1 (hypothetical protein Csa_3G217160 [Cucumis sativus])

HSP 1 Score: 407.9 bits (1047), Expect = 2.8e-110
Identity = 199/292 (68.15%), Postives = 229/292 (78.42%), Query Frame = 0

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEMSPWFY-KGS 60
           MKEIVLSI+VAFSLTT L +AVP +YGY V    VPGATHLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  NFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSN 120
           NFPTRLSPC+E KKQTQLWT++ D TIRPMND++CL + V    I   VVSEC K    N
Sbjct: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPN 120

Query: 121 KKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLC 180
           KKW  K D TI  V S MVLTG+ +YVT+Q NK  PSQSWE T+SL  MVANI+WL NLC
Sbjct: 121 KKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLC 180

Query: 181 LQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDK 240
           LQST DS++V L+GCN++NK Q W+LY DGTIR+HVN+NYCLTS+QDFGRFV VSKCEDK
Sbjct: 181 LQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDK 240

Query: 241 PQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWII 288
           PQQRW L A+D TI+HPNTDMV+DV SVP    P  +VTN RDG+A+QRW I
Sbjct: 241 PQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

BLAST of CsaV3_3G019090 vs. NCBI nr
Match: XP_008456219.1 (PREDICTED: nigrin b-like [Cucumis melo])

HSP 1 Score: 400.6 bits (1028), Expect = 4.5e-108
Identity = 196/247 (79.35%), Postives = 215/247 (87.04%), Query Frame = 0

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR 60
           MKE V SI+VAFSLTTHLAMA+P  + ++    ATHLVGRDG CLEMS WFYKG+  PTR
Sbjct: 1   MKEFVSSIIVAFSLTTHLAMAMPQLWIWR-FSVATHLVGRDGFCLEMSSWFYKGNYIPTR 60

Query: 61  LSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVN-FITNVVVSECAKEPHSNKKWI 120
           LSPC++ KKQTQ  TVLQD TIRPMNDRYCLV YV VN FITNVVVSECAKEP+SNKKW 
Sbjct: 61  LSPCDKHKKQTQFRTVLQDGTIRPMNDRYCLVLYVLVNKFITNVVVSECAKEPNSNKKWT 120

Query: 121 HKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLCLQST 180
           HKED TIVH+GS MV+TGN +YVT+QRNKNAPSQSW+AT+SLTPMV NIKWLENLCLQST
Sbjct: 121 HKEDGTIVHIGSEMVITGNLDYVTLQRNKNAPSQSWKATESLTPMVVNIKWLENLCLQST 180

Query: 181 KDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDKPQQR 240
           +DSNYV LDGCNSENKSQ W+LY DGTIRKHVNRNYCLTSE+  GRFV VSKCEDKPQQR
Sbjct: 181 EDSNYVGLDGCNSENKSQRWALYSDGTIRKHVNRNYCLTSEKYSGRFVIVSKCEDKPQQR 240

Query: 241 WGLGAED 247
           W LGA+D
Sbjct: 241 WDLGAKD 246

BLAST of CsaV3_3G019090 vs. Swiss-Prot
Match: sp|P33183|NIGB_SAMNI (Nigrin b OS=Sambucus nigra OX=4202 PE=1 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 2.2e-29
Identity = 81/258 (31.40%), Postives = 135/258 (52.33%), Query Frame = 0

Query: 36  HLVGRDGLCLEMSPWFYKGSNFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYV 95
           ++VGRDGLC+++    Y     P +L PC  Q+ Q   WT   D+TIR M    C+ +  
Sbjct: 311 NIVGRDGLCVDVRNG-YDTDGTPLQLWPCGTQRNQR--WTFDSDDTIRSMGK--CMTAN- 370

Query: 96  SVNFITNVVVSECAKEPHSNKKWIHKEDRTIVHVGSGMVLT----GNSNYVTVQRNKNAP 155
            +N  +N+V+  C+    +  KW    D +I++  SG+V+T     +   + ++ N  A 
Sbjct: 371 GLNNGSNIVIFNCSTAAENAIKWEVPIDGSIINPSSGLVMTAPRAASRTILLLEDNIYAA 430

Query: 156 SQSWEATKSLTPMVANIKWLENLCLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHV 215
           SQ W  T ++ P+VA+I   + +CLQS  ++N V ++ C + +  Q W+LYGD TIR + 
Sbjct: 431 SQGWTVTNNVKPIVASIVGYKEMCLQSNGENNGVWMEDCEATSLQQQWALYGDRTIRVNS 490

Query: 216 NRNYCLTSE-QDFGRFVAVSKCEDKPQQRWGLGAEDNTINHPNTDMVMDV--LSVPFDDL 275
            R  C+T+   +    + + KC+  P QRW   + D  I +P +  VMDV   +V   ++
Sbjct: 491 TRGLCVTTNGYNSKDLIIILKCQGLPSQRWFFNS-DGAIVNPKSRHVMDVRASNVSLREI 550

Query: 276 PLAVVTNHRDGTATQRWI 287
            +   T    G   Q+W+
Sbjct: 551 IIFPAT----GNPNQQWV 557

BLAST of CsaV3_3G019090 vs. Swiss-Prot
Match: sp|Q41358|SNAIB_SAMNI (Ribosome-inactivating protein SNAI OS=Sambucus nigra OX=4202 GN=SNA-I PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.9e-29
Identity = 85/263 (32.32%), Postives = 131/263 (49.81%), Query Frame = 0

Query: 30  VVPGATHLVGRDGLCLEMSPWFYKGSNFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRY 89
           VV     + G DGLC+++    Y   N P +L PC  +    QLWT   D TIR +    
Sbjct: 318 VVEVTRRISGWDGLCVDVRYGHYIDGN-PVQLRPCGNE--CNQLWTFRTDGTIRWLGK-- 377

Query: 90  CLVSYVSVNFITNVVVSECAKEPHSNKKWIHKEDRTIVHVGSGMVLT----GNSNYVTVQ 149
           CL +       ++V++ +C   P    KW+   D TI +  SG+VLT         ++++
Sbjct: 378 CLTA------SSSVMIYDCNTVPPEATKWVVSIDGTITNPHSGLVLTAPQAAEGTALSLE 437

Query: 150 RNKNAPSQSWEATKSLTPMVANIKWLENLCLQSTKDSNYVQLDGCNSENKSQHWSLYGDG 209
            N +A  Q W     + P+V  I   + +CL+   ++N+V L+ C      Q W+LYGDG
Sbjct: 438 NNIHAARQGW-TVGDVEPLVTFIVGYKQMCLRENGENNFVWLEDCVLNRVQQEWALYGDG 497

Query: 210 TIRKHVNRNYCLTSE-QDFGRFVAVSKCEDKPQQRWGLGAEDNTINHPNTDMVMDVLSVP 269
           TIR + NR+ C+TSE  +    + + KCE    QRW     + TI++PN  ++MDV    
Sbjct: 498 TIRVNSNRSLCVTSEDHEPSDLIVILKCEGSGNQRWVFNT-NGTISNPNAKLLMDVAQ-- 557

Query: 270 FDDLPLAVVTNHR-DGTATQRWI 287
             D+ L  +  +R  G   Q+WI
Sbjct: 558 -RDVSLRKIILYRPTGNPNQQWI 564

BLAST of CsaV3_3G019090 vs. Swiss-Prot
Match: sp|O22415|SNAIF_SAMNI (Ribosome-inactivating protein SNAIf OS=Sambucus nigra OX=4202 GN=SNA-If PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.1e-28
Identity = 83/263 (31.56%), Postives = 128/263 (48.67%), Query Frame = 0

Query: 30  VVPGATHLVGRDGLCLEMSPWFYKGSNFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRY 89
           VV     + G DGLC+++    Y   N   +L PC  +    QLWT   D TIR +    
Sbjct: 318 VVEVTRRISGWDGLCVDVRDGHYIDGN-TVQLGPCGNE--CNQLWTFRTDGTIRWLGK-- 377

Query: 90  CLVSYVSVNFITNVVVSECAKEPHSNKKWIHKEDRTIVHVGSGMVLT----GNSNYVTVQ 149
           CL +       ++V++ +C   P    KW+   D TI +  SG+VLT         ++++
Sbjct: 378 CLTT------SSSVMIYDCNTVPPEATKWVVSTDGTITNPRSGLVLTAPQAAEGTALSLE 437

Query: 150 RNKNAPSQSWEATKSLTPMVANIKWLENLCLQSTKDSNYVQLDGCNSENKSQHWSLYGDG 209
            N +A  Q W     + P+V  I   + +CL    ++N+V L+ C      Q W+LYGDG
Sbjct: 438 NNIHAARQGW-TVGDVEPLVTFIVGYKQMCLTENGENNFVWLEDCVLNRVEQEWALYGDG 497

Query: 210 TIRKHVNRNYCLTSE-QDFGRFVAVSKCEDKPQQRWGLGAEDNTINHPNTDMVMDVLSVP 269
           TIR + NR+ C+TSE  +    + + KCE    QRW     + TI++PN  +VMDV    
Sbjct: 498 TIRVNSNRSLCVTSEDHEPSDLIVILKCEGSGNQRWVFNT-NGTISNPNAKLVMDVAQ-- 557

Query: 270 FDDLPL-AVVTNHRDGTATQRWI 287
             ++ L  ++     G   Q+WI
Sbjct: 558 -SNVSLRKIILYPPTGNPNQQWI 564

BLAST of CsaV3_3G019090 vs. Swiss-Prot
Match: sp|P06750|AGGL_RICCO (Agglutinin OS=Ricinus communis OX=3988 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.7e-26
Identity = 84/231 (36.36%), Postives = 123/231 (53.25%), Query Frame = 0

Query: 37  LVGRDGLCLEMS-PWFYKGSNFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYV 96
           +VGR+GLC++++   F+ G+  P +L PC       QLWT+ +D TIR  N +   +S  
Sbjct: 315 IVGRNGLCVDVTGEEFFDGN--PIQLWPCKSNTDWNQLWTLRKDSTIR-SNGKCLTISKS 374

Query: 97  SVNFITNVVVSECAKEPHSNKKWIHKEDRTIVHVGSGMVL---TGNS-NYVTVQRNKNAP 156
           S      VV+  C+       +W   ++RTI++  SG+VL   +GNS   +TVQ N  A 
Sbjct: 375 SPR--QQVVIYNCSTATVGATRWQIWDNRTIINPRSGLVLAATSGNSGTKLTVQTNIYAV 434

Query: 157 SQSWEATKSLTPMVANIKWLENLCLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHV 216
           SQ W  T +  P V  I  L  +CLQ+  +S  V L+ C SE   Q W+LY DG+IR   
Sbjct: 435 SQGWLPTNNTQPFVTTIVGLYGMCLQA--NSGKVWLEDCTSEKAEQQWALYADGSIRPQQ 494

Query: 217 NRNYCLTSEQDF-GRFVAVSKCEDKPQ-QRWGLGAEDNTINHPNTDMVMDV 261
           NR+ CLT++ +  G  V +  C      QRW +   D TI +    +V+DV
Sbjct: 495 NRDNCLTTDANIKGTVVKILSCGPASSGQRW-MFKNDGTILNLYNGLVLDV 537

BLAST of CsaV3_3G019090 vs. Swiss-Prot
Match: sp|Q9M6E9|AGGL_ABRPR (Agglutinin-1 OS=Abrus precatorius OX=3816 GN=AAG PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-25
Identity = 81/253 (32.02%), Postives = 121/253 (47.83%), Query Frame = 0

Query: 39  GRDGLCLEMSPWFYKGSNFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVN 98
           GRDGLC+++S   Y   N P  L  C +Q +  QLWT+  D+TIR          Y   N
Sbjct: 300 GRDGLCVDVSDNAYNNGN-PIILWKCKDQLEVNQLWTLKSDKTIRSKGKCLTTYGYAPGN 359

Query: 99  FITNVVVSECAKEPHSNKKWIHKEDRTIVHVGSGMVLTGNSN----YVTVQRNKNAPSQS 158
           +   V++ +C+        W   ++ TI++  SG+VL+  S+     +TVQ+N     Q 
Sbjct: 360 Y---VMIYDCSSAVAEATYWDIWDNGTIINPKSGLVLSAESSSMGGTLTVQKNDYRMRQG 419

Query: 159 WEATKSLTPMVANIKWLENLCLQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRN 218
           W      +P V +I     LC+++    N + LD C+   + Q W++Y DG+IR   N N
Sbjct: 420 WRTGNDTSPFVTSIAGFFKLCMEA--HGNSMWLDVCDITKEEQQWAVYPDGSIRPVQNTN 479

Query: 219 YCLTSEQ-DFGRFVAVSKCEDK-PQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAV 278
            CLT E+   G  + +  C +    QRW +   D TI +   DMVMDV S   D     +
Sbjct: 480 NCLTCEEHKQGATIVMMGCSNAWASQRW-VFKSDGTIYNLYDDMVMDVKS--SDPSLKQI 539

Query: 279 VTNHRDGTATQRW 286
           +     G A Q W
Sbjct: 540 ILWPYTGNANQMW 543

BLAST of CsaV3_3G019090 vs. TrEMBL
Match: tr|A0A0A0L756|A0A0A0L756_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G219180 PE=4 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 2.1e-170
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR 60
           MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR
Sbjct: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR 60

Query: 61  LSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSNKKWIH 120
           LSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSNKKWIH
Sbjct: 61  LSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSNKKWIH 120

Query: 121 KEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLCLQSTK 180
           KEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLCLQSTK
Sbjct: 121 KEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLCLQSTK 180

Query: 181 DSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDKPQQRW 240
           DSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDKPQQRW
Sbjct: 181 DSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDKPQQRW 240

Query: 241 GLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWIIY 289
           GLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWIIY
Sbjct: 241 GLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWIIY 288

BLAST of CsaV3_3G019090 vs. TrEMBL
Match: tr|A0A1S4E0X9|A0A1S4E0X9_CUCME (nigrin b-like OS=Cucumis melo OX=3656 GN=LOC103496121 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 1.2e-125
Identity = 215/291 (73.88%), Postives = 249/291 (85.57%), Query Frame = 0

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYG----YQVVPGATHLVGRDGLCLEMSPWFYKGSN 60
           MKEIVLSI+VAFSLTTHLAMAVPS+YG    Y  VP ATHLVGRDGLCLEMSPWFY+G+N
Sbjct: 1   MKEIVLSIIVAFSLTTHLAMAVPSNYGYGGEYGGVPRATHLVGRDGLCLEMSPWFYRGNN 60

Query: 61  FPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSNK 120
           FPTRLSPC+E KKQTQLWTV+ D TIRPMND++CLV+ V V  I   VV ECAKEP+SNK
Sbjct: 61  FPTRLSPCDEHKKQTQLWTVVGDGTIRPMNDKFCLVADVLVGLINKAVVRECAKEPNSNK 120

Query: 121 KWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLCL 180
           +W HK+D TI HV SGMVLTG+S+YVT+Q NKN PSQSWEAT+S TPM+ANI+WL NLCL
Sbjct: 121 RWTHKKDGTITHVESGMVLTGDSDYVTLQSNKNTPSQSWEATESSTPMIANIEWLNNLCL 180

Query: 181 QSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDKP 240
           QST DSN+V L+GCN ENK Q W+LYGDGTIR++VNRNYCLTS++  GRF+ +SKCEDKP
Sbjct: 181 QSTDDSNHVGLNGCNRENKDQRWALYGDGTIRQNVNRNYCLTSDEYLGRFIVMSKCEDKP 240

Query: 241 QQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWII 288
           QQRW LGA+D+TI+HPN+DMVMDVL VP+ D   AVVTN RDG+A+QRW I
Sbjct: 241 QQRWNLGAKDSTIDHPNSDMVMDVLFVPYYDFSSAVVTNRRDGSASQRWTI 291

BLAST of CsaV3_3G019090 vs. TrEMBL
Match: tr|Q9SLV9|Q9SLV9_CUCSA (XSP30 OS=Cucumis sativus OX=3659 GN=XSP30 PE=2 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 6.5e-111
Identity = 200/292 (68.49%), Postives = 230/292 (78.77%), Query Frame = 0

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEMSPWFY-KGS 60
           MKEIVLSI+VAFSLTT LA+AVP +YGY V    VPGATHLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIIVAFSLTTQLAIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  NFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSN 120
           NFPTRLSPC+E KKQTQLWT++ D TIRPMND++CL + V    I   VVSEC K    N
Sbjct: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPN 120

Query: 121 KKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLC 180
           KKW  K D TI  V S MVLTG+ +YVT+Q NK  PSQSWE T+SL  MVANI+WL NLC
Sbjct: 121 KKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLC 180

Query: 181 LQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDK 240
           LQST DS++V L+GCN++NK Q W+LY DGTIR+HVN+NYCLTS+QDFGRFV VSKCEDK
Sbjct: 181 LQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDK 240

Query: 241 PQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWII 288
           PQQRW L A+D TI+HPNTDMV+DV SVP    P  +VTN RDG+A+QRW I
Sbjct: 241 PQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

BLAST of CsaV3_3G019090 vs. TrEMBL
Match: tr|A0A0A0L9D1|A0A0A0L9D1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217160 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 1.9e-110
Identity = 199/292 (68.15%), Postives = 229/292 (78.42%), Query Frame = 0

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQV----VPGATHLVGRDGLCLEMSPWFY-KGS 60
           MKEIVLSI+VAFSLTT L +AVP +YGY V    VPGATHLVGRDGLCLEMSPW+   G 
Sbjct: 1   MKEIVLSIIVAFSLTTQLVIAVPPNYGYGVGYGGVPGATHLVGRDGLCLEMSPWYKPAGI 60

Query: 61  NFPTRLSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVNFITNVVVSECAKEPHSN 120
           NFPTRLSPC+E KKQTQLWT++ D TIRPMND++CL + V    I   VVSEC K    N
Sbjct: 61  NFPTRLSPCDE-KKQTQLWTIVGDGTIRPMNDKFCLAAEVFYGVINKAVVSECGKVSDPN 120

Query: 121 KKWIHKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLC 180
           KKW  K D TI  V S MVLTG+ +YVT+Q NK  PSQSWE T+SL  MVANI+WL NLC
Sbjct: 121 KKWTQKNDGTIALVDSRMVLTGDLDYVTLQSNKYTPSQSWEVTESLNSMVANIEWLNNLC 180

Query: 181 LQSTKDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDK 240
           LQST DS++V L+GCN++NK Q W+LY DGTIR+HVN+NYCLTS+QDFGRFV VSKCEDK
Sbjct: 181 LQSTDDSSHVGLNGCNTDNKYQRWALYADGTIRQHVNKNYCLTSDQDFGRFVVVSKCEDK 240

Query: 241 PQQRWGLGAEDNTINHPNTDMVMDVLSVPFDDLPLAVVTNHRDGTATQRWII 288
           PQQRW L A+D TI+HPNTDMV+DV SVP    P  +VTN RDG+A+QRW I
Sbjct: 241 PQQRWSLDAKDYTIDHPNTDMVLDVFSVPDSTFPSVLVTNRRDGSASQRWTI 291

BLAST of CsaV3_3G019090 vs. TrEMBL
Match: tr|A0A1S3C2B4|A0A1S3C2B4_CUCME (nigrin b-like OS=Cucumis melo OX=3656 GN=LOC103496222 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 3.0e-108
Identity = 196/247 (79.35%), Postives = 215/247 (87.04%), Query Frame = 0

Query: 1   MKEIVLSIVVAFSLTTHLAMAVPSDYGYQVVPGATHLVGRDGLCLEMSPWFYKGSNFPTR 60
           MKE V SI+VAFSLTTHLAMA+P  + ++    ATHLVGRDG CLEMS WFYKG+  PTR
Sbjct: 1   MKEFVSSIIVAFSLTTHLAMAMPQLWIWR-FSVATHLVGRDGFCLEMSSWFYKGNYIPTR 60

Query: 61  LSPCNEQKKQTQLWTVLQDETIRPMNDRYCLVSYVSVN-FITNVVVSECAKEPHSNKKWI 120
           LSPC++ KKQTQ  TVLQD TIRPMNDRYCLV YV VN FITNVVVSECAKEP+SNKKW 
Sbjct: 61  LSPCDKHKKQTQFRTVLQDGTIRPMNDRYCLVLYVLVNKFITNVVVSECAKEPNSNKKWT 120

Query: 121 HKEDRTIVHVGSGMVLTGNSNYVTVQRNKNAPSQSWEATKSLTPMVANIKWLENLCLQST 180
           HKED TIVH+GS MV+TGN +YVT+QRNKNAPSQSW+AT+SLTPMV NIKWLENLCLQST
Sbjct: 121 HKEDGTIVHIGSEMVITGNLDYVTLQRNKNAPSQSWKATESLTPMVVNIKWLENLCLQST 180

Query: 181 KDSNYVQLDGCNSENKSQHWSLYGDGTIRKHVNRNYCLTSEQDFGRFVAVSKCEDKPQQR 240
           +DSNYV LDGCNSENKSQ W+LY DGTIRKHVNRNYCLTSE+  GRFV VSKCEDKPQQR
Sbjct: 181 EDSNYVGLDGCNSENKSQRWALYSDGTIRKHVNRNYCLTSEKYSGRFVIVSKCEDKPQQR 240

Query: 241 WGLGAED 247
           W LGA+D
Sbjct: 241 WDLGAKD 246

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004146289.13.2e-170100.00PREDICTED: nigrin b-like [Cucumis sativus] >KGN57583.1 hypothetical protein Csa_... [more]
XP_016901886.11.8e-12573.88PREDICTED: nigrin b-like [Cucumis melo][more]
NP_001274403.19.8e-11168.49uncharacterized protein LOC101221335 precursor [Cucumis sativus] >BAA88294.1 XSP... [more]
KGN57579.12.8e-11068.15hypothetical protein Csa_3G217160 [Cucumis sativus][more]
XP_008456219.14.5e-10879.35PREDICTED: nigrin b-like [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
sp|P33183|NIGB_SAMNI2.2e-2931.40Nigrin b OS=Sambucus nigra OX=4202 PE=1 SV=2[more]
sp|Q41358|SNAIB_SAMNI2.9e-2932.32Ribosome-inactivating protein SNAI OS=Sambucus nigra OX=4202 GN=SNA-I PE=1 SV=1[more]
sp|O22415|SNAIF_SAMNI4.1e-2831.56Ribosome-inactivating protein SNAIf OS=Sambucus nigra OX=4202 GN=SNA-If PE=1 SV=... [more]
sp|P06750|AGGL_RICCO1.7e-2636.36Agglutinin OS=Ricinus communis OX=3988 PE=1 SV=1[more]
sp|Q9M6E9|AGGL_ABRPR1.1e-2532.02Agglutinin-1 OS=Abrus precatorius OX=3816 GN=AAG PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0L756|A0A0A0L756_CUCSA2.1e-170100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G219180 PE=4 SV=1[more]
tr|A0A1S4E0X9|A0A1S4E0X9_CUCME1.2e-12573.88nigrin b-like OS=Cucumis melo OX=3656 GN=LOC103496121 PE=4 SV=1[more]
tr|Q9SLV9|Q9SLV9_CUCSA6.5e-11168.49XSP30 OS=Cucumis sativus OX=3659 GN=XSP30 PE=2 SV=1[more]
tr|A0A0A0L9D1|A0A0A0L9D1_CUCSA1.9e-11068.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G217160 PE=4 SV=1[more]
tr|A0A1S3C2B4|A0A1S3C2B4_CUCME3.0e-10879.35nigrin b-like OS=Cucumis melo OX=3656 GN=LOC103496222 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR035992Ricin_B-like_lectins
IPR000772Ricin_B_lectin
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G019090.1CsaV3_3G019090.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000772Ricin B, lectin domainSMARTSM00458ricin_3coord: 162..288
e-value: 7.0E-14
score: 62.1
coord: 32..158
e-value: 2.1E-6
score: 37.3
IPR000772Ricin B, lectin domainPFAMPF00652Ricin_B_lectincoord: 36..155
e-value: 8.7E-18
score: 64.7
coord: 172..285
e-value: 5.4E-19
score: 68.6
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 161..288
score: 26.457
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 31..158
score: 20.209
IPR000772Ricin B, lectin domainCDDcd00161RICINcoord: 173..287
e-value: 1.77936E-16
score: 72.5382
IPR000772Ricin B, lectin domainCDDcd00161RICINcoord: 36..156
e-value: 4.47628E-14
score: 65.9898
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 163..288
e-value: 6.1E-28
score: 99.0
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 32..158
e-value: 2.9E-20
score: 74.3
IPR035992Ricin B-like lectinsSUPERFAMILYSSF50370Ricin B-like lectinscoord: 30..156
IPR035992Ricin B-like lectinsSUPERFAMILYSSF50370Ricin B-like lectinscoord: 165..287

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None