CsaV3_3G018930 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G018930
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Plant self-incompatibility S1
Location	chr3 : 14586943 .. 14588454 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTTGTTTGAGGGTCAAGTTTTGAGTTTCAGCAGACGTCCTCCAGCACCTCCGAGGTATTTTGTTCACGTGGTAAATGGGCTAAGTTCCAACAGTTTGGATGTGCATTGCCAATCAAAGGACGATGATTTGGGATATCATCATTTGGCTAACCGTGGAGATGAATTCCAATGGAACTTTCAAATAAACATATGGGGAACAACTTTGTTTTGGTGTAGATTGGACAAGTCAGATGCATATGTCTCTTTTGAAAGCTTTTGGTCTGAGCGAAGACACCGTTGGCTTTATGACAGATGCGGGATTGAATTAGGAACTTGTATTTGGACTGCTAAGGACGATGGAATTTATTTGAGAAACATGCTCACTAATGTTGATGAGTTTATTCACAAATGGATCTCTAAGTAAGTTTTGTTAATTCTCGGATTCATCCGGATTATTGAATAAAATAATAGTTTAAAGTTAAATATTAAATTTAATTAATTAAATGCTTTAATTAATTAATTCTTATTTTATTATATAATTTTATATTGCATAAATACACATCAAATTAATTAATTGGTTTAATTAAATTACAAACTTCATATAACTATATAATATTTTTATAGTGAAAAAATCCAACATTAACTTACTGAATTTATCCAACTTTAAATTCATCTCGAAAGGAGGGTGAGTTTCTACCTCAAACTTAATCGAATTTGAAGTGTTAAATTCTTGTTAGTTCACTTCATGCATTACTTGTATGGTCAATGCTTATAAATAAATGATGATTAATTTTTAAATTCATTTGCTCAAATTTCGAGTACAAATTAGAACTTTAATGTTAGATTAGAACTGAGATTTAATTTATAGATTCAATGTTGGGTTAGGTTGACGTTGAAGATCATCAAGAATCAACGTAATGCAAAAATAAAAGTTTGCATAAAACTACAATCTAAGTACACATCCTTCAAAACACTTCTATATCACATTTTGGACCAACCACCCCTTTCAAAAACTAACAAGAAACACATAAGACTTCAACCATATAGGTGAAAATGTGTTAATTCATAAACAACAGTTAGCACTTACGAAGGCAGTTATAAAATTTCAATAAACACATAGTCCAATACTTGTATAGCCATAAAACACTTCCATACAACAATAGTTGAAAACAACATATTCAAAATACTTTTATATCACATGTGGAACCATTATATTATACTTCAAAAACTAGAATAAAAAAGTATTAAAGGCTTCCTTAATATTAATAATCATTTGTCCCTTCACAAACAACAACCAGTACTTCCATGATTACATACATCAAATAACAAAGACAATATCCACAAATCTTCCAACAGAGAGGTCATGGTATCACCGTATTAGACTTCAATTAATACTTCTATTGAATTTCACAAACTATAATTAGTACTTCCATTAGAGTTCTGATCCATTTTAAAGTTTCATATTGTACTCAGACCTCATCAAGAATCAACAACTTTCTATATTACCCCATCCAACAAAATGTACTAG

mRNA sequence

ATGATTTTGTTTGAGGGTCAAGTTTTGAGTTTCAGCAGACGTCCTCCAGCACCTCCGAGGTATTTTGTTCACGTGGTAAATGGGCTAAGTTCCAACAGTTTGGATGTGCATTGCCAATCAAAGGACGATGATTTGGGATATCATCATTTGGCTAACCGTGGAGATGAATTCCAATGGAACTTTCAAATAAACATATGGGGAACAACTTTGTTTTGGTGTAGATTGGACAAGTCAGATGCATATGTCTCTTTTGAAAGCTTTTGGTCTGAGCGAAGACACCGTTGGCTTTATGACAGATGCGGGATTGAATTAGGAACTTGTATTTGGACTGCTAAGGACGATGGAATTTATTTGAGAAACATGCTCACTAATGTTGATGAGTTTATTCACAAATGGATCTCTAAACCTCATCAAGAATCAACAACTTTCTATATTACCCCATCCAACAAAATGTACTAG

Coding sequence (CDS)

ATGATTTTGTTTGAGGGTCAAGTTTTGAGTTTCAGCAGACGTCCTCCAGCACCTCCGAGGTATTTTGTTCACGTGGTAAATGGGCTAAGTTCCAACAGTTTGGATGTGCATTGCCAATCAAAGGACGATGATTTGGGATATCATCATTTGGCTAACCGTGGAGATGAATTCCAATGGAACTTTCAAATAAACATATGGGGAACAACTTTGTTTTGGTGTAGATTGGACAAGTCAGATGCATATGTCTCTTTTGAAAGCTTTTGGTCTGAGCGAAGACACCGTTGGCTTTATGACAGATGCGGGATTGAATTAGGAACTTGTATTTGGACTGCTAAGGACGATGGAATTTATTTGAGAAACATGCTCACTAATGTTGATGAGTTTATTCACAAATGGATCTCTAAACCTCATCAAGAATCAACAACTTTCTATATTACCCCATCCAACAAAATGTACTAG

Protein sequence

MILFEGQVLSFSRRPPAPPRYFVHVVNGLSSNSLDVHCQSKDDDLGYHHLANRGDEFQWNFQINIWGTTLFWCRLDKSDAYVSFESFWSERRHRWLYDRCGIELGTCIWTAKDDGIYLRNMLTNVDEFIHKWISKPHQESTTFYITPSNKMY

Homology

[Close]

BLAST of CsaV3_3G018930 vs. NCBI nr
Match: XP_008462115.1 (PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo])

HSP 1 Score: 235.0 bits (598), Expect = 1.7e-58
Identity = 101/135 (74.81%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MILFEGQVLSFSRRPPAPPRYFVHVVNGLSSNSLDVHCQSKDDDLGYHHLANRGDEFQWN 60
           M+L EG+V  + + PP P RYFVHVVNGLS  SLDVHCQSK+DDLGYHHL NRGDE+QWN
Sbjct: 1   MVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWN 60

Query: 61  FQINIWGTTLFWCRLDKSDAYVSFESFWSERRHRWLYDRCGIELGTCIWTAKDDGIYLRN 120
           F+ N+WGTTLFWCRL+K DAYV+FESFW E ++ WL DRCG + GTCIWTAKDDGIYLRN
Sbjct: 61  FEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQ-GTCIWTAKDDGIYLRN 120

Query: 121 MLTNVDEFIHKWISK 136
           M TNVDEF+HKWI K
Sbjct: 121 MPTNVDEFVHKWIPK 134

[Close]

BLAST of CsaV3_3G018930 vs. NCBI nr
Match: XP_008462111.1 (PREDICTED: uncharacterized protein LOC103500540 [Cucumis melo])

HSP 1 Score: 231.5 bits (589), Expect = 1.9e-57
Identity = 100/135 (74.07%), Postives = 113/135 (83.70%), Query Frame = 0


Query: 1   MILFEGQVLSFSRRPPAPPRYFVHVVNGLSSNSLDVHCQSKDDDLGYHHLANRGDEFQWN 60
           M+L EGQV ++S  PP   RYFVHVVNGLS ++LDVHCQSKDDDLGYH L N GD+FQWN
Sbjct: 1   MVLVEGQVPNWSEPPPQASRYFVHVVNGLSYHNLDVHCQSKDDDLGYHCLVNHGDDFQWN 60

Query: 61  FQINIWGTTLFWCRLDKSDAYVSFESFWSERRHRWLYDRCGIELGTCIWTAKDDGIYLRN 120
           F+ N WGTTLFWCRL+K DAYV+FESFW E R+ WL  RCG +LGTCIWTAKDDGIYLRN
Sbjct: 61  FRENFWGTTLFWCRLEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120

Query: 121 MLTNVDEFIHKWISK 136
           + TNVDEF+HKWI K
Sbjct: 121 LSTNVDEFVHKWIPK 135

[Close]

BLAST of CsaV3_3G018930 vs. NCBI nr
Match: XP_016903452.1 (PREDICTED: uncharacterized protein LOC103503421 [Cucumis melo])

HSP 1 Score: 229.6 bits (584), Expect = 7.3e-57
Identity = 100/135 (74.07%), Postives = 111/135 (82.22%), Query Frame = 0


Query: 1   MILFEGQVLSFSRRPPAPPRYFVHVVNGLSSNSLDVHCQSKDDDLGYHHLANRGDEFQWN 60
           M+L EGQV  +S+ PP P RYFVHVVNGLS  SLDVHCQSKDDDLGYH L  +GDEFQWN
Sbjct: 14  MVLVEGQVSKWSKPPPLPSRYFVHVVNGLSYQSLDVHCQSKDDDLGYHRLVKQGDEFQWN 73

Query: 61  FQINIWGTTLFWCRLDKSDAYVSFESFWSERRHRWLYDRCGIELGTCIWTAKDDGIYLRN 120
           F+ N WGTTLFWCRL+K DAYV+FESFW E ++ WL  RCG + GTCIWTAKDDGIYLRN
Sbjct: 74  FEENFWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRHRCGNQ-GTCIWTAKDDGIYLRN 133

Query: 121 MLTNVDEFIHKWISK 136
           M TN DEF+HKWI K
Sbjct: 134 MPTNADEFVHKWIPK 147

[Close]

BLAST of CsaV3_3G018930 vs. NCBI nr
Match: XP_004139731.1 (PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 9.6e-57
Identity = 97/135 (71.85%), Postives = 110/135 (81.48%), Query Frame = 0


Query: 1   MILFEGQVLSFSRRPPAPPRYFVHVVNGLSSNSLDVHCQSKDDDLGYHHLANRGDEFQWN 60
           M+L E QV ++S  PP   RYFVHVVNGLSS+SLDVHC+SKDDDLGYHH+ N GD+FQWN
Sbjct: 1   MVLVESQVPNWSEPPPTASRYFVHVVNGLSSHSLDVHCKSKDDDLGYHHMVNHGDDFQWN 60

Query: 61  FQINIWGTTLFWCRLDKSDAYVSFESFWSERRHRWLYDRCGIELGTCIWTAKDDGIYLRN 120
           F+ N WGTTLFWCRL+  +AY  FESFW E R+ WL  RCG +LGTCIWTAKDDGIYLRN
Sbjct: 61  FEENFWGTTLFWCRLENPEAYADFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120

Query: 121 MLTNVDEFIHKWISK 136
           M  NVDEF+HKWI K
Sbjct: 121 MPANVDEFVHKWIPK 135

[Close]

BLAST of CsaV3_3G018930 vs. NCBI nr
Match: XP_008462110.1 (PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo])

HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54
Identity = 96/134 (71.64%), Postives = 111/134 (82.84%), Query Frame = 0


Query: 2   ILFEGQVLSFSRRPPAPPRYFVHVVNGLSSNSLDVHCQSKDDDLGYHHLANRGDEFQWNF 61
           ++ EGQV  + + PP P RYFV+VVNGLS +SLDVHCQSKDDDLGYHHL N GD FQWNF
Sbjct: 13  VVVEGQVSRWKKPPPQPSRYFVNVVNGLSYHSLDVHCQSKDDDLGYHHLVNHGDYFQWNF 72

Query: 62  QINIWGTTLFWCRLDKSDAYVSFESFWSERRHRWLYDRCGIELGTCIWTAKDDGIYLRNM 121
           + N +GTTLFWCRL+KSDAYV+FESFW E  +RWL DRCG + GTC+W AKDDGIYLRN+
Sbjct: 73  EENFFGTTLFWCRLEKSDAYVAFESFWPESTNRWLRDRCGNQ-GTCVWIAKDDGIYLRNI 132

Query: 122 LTNVDEFIHKWISK 136
             NVDE +HKWISK
Sbjct: 133 PVNVDELVHKWISK 145

[Close]

BLAST of CsaV3_3G018930 vs. TAIR10
Match: AT4G16295.1 (S-protein homologue 1)

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19
Identity = 48/118 (40.68%), Postives = 70/118 (59.32%), Query Frame = 0


Query: 16  PAPPRYFVHVVNGLSS-NSLDVHCQSKDDDLGYHHLANRGDEFQWNFQINIWGTTLFWCR 75
           P    + V VVNGL++  +L +HC+SK+DDLG  +L  R + F WNF  N+  +T FWC 
Sbjct: 36  PKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFR-NRFSWNFGENMLHSTFFWCY 95

Query: 76  LDKSDAYVSFESFWSERRHRWLYDRCGIELGTCIWTAKDDGIYLRNMLTNVDEFIHKW 133
           ++K + +++   FW +     L+ RCG +   CIWTAK DG+YL N  +  D    KW
Sbjct: 96  MNKDNGHMNVNVFWDD---VILFHRCGWK--NCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of CsaV3_3G018930 vs. TAIR10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 90.5 bits (223), Expect = 9.7e-19
Identity = 47/120 (39.17%), Postives = 69/120 (57.50%), Query Frame = 0


Query: 16  PAPPRYFVHVVNGLSS-NSLDVHCQSKDDDLGYHHLANRGDEFQWNFQINIWGTTLFWCR 75
           P    + V V NGL++  +L +HC+SK++DLG  +L    D F WNF  N+  +TLFWC 
Sbjct: 36  PKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFL-DRFSWNFGENMLHSTLFWCY 95

Query: 76  LDKSDAYVSFESFWSERRHRWLYDRCGIELGTCIWTAKDDGIYLRNMLTNVDEFIHKWIS 135
           + K D +++ + FW +     L+ RC  +   C+WTAK+DG+YL N     D    KW S
Sbjct: 96  MSKDDGHMNVKVFWDD---VILFHRC--DWKNCVWTAKNDGLYLWNSAIGEDVLSEKWKS 149

[Close]

BLAST of CsaV3_3G018930 vs. TAIR10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 65.9 bits (159), Expect = 2.5e-11
Identity = 33/93 (35.48%), Postives = 50/93 (53.76%), Query Frame = 0


Query: 31  SNSLDVHCQSKDDDLGYHHLANRGDEFQWNFQINIWGTTLFWCRLDKSD------AYVSF 90
           S  L VHC+SKDDDLG  H+   G ++++ F  NIW TT F C++D+         +V++
Sbjct: 38  SKLLKVHCRSKDDDLG-EHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVAY 97

Query: 91  ESFWSERRHRWLYDRCGIELGTCIWTAKDDGIY 118
           E+ WS+               +C W  ++DGIY
Sbjct: 98  ETSWSKALE-----------ASCKWIGREDGIY 118

[Close]

BLAST of CsaV3_3G018930 vs. TAIR10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 63.9 bits (154), Expect = 9.7e-11
Identity = 35/97 (36.08%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 26  VNGLSSNSLDVHCQSKDDDLGYHHLANRGDEFQWNFQINIWGTTLFWCRLDKSDAYVSFE 85
           +N  + N L VHC+SK++D+G  +L   G+   ++F+ N WGTT FWC L K   Y    
Sbjct: 32  LNPKNKNILKVHCKSKNNDIGVKYL-KIGEVMSFSFKTNFWGTTEFWCNLYKGPDY---- 91

Query: 86  SFWSERRHRWL--YDRCGI---ELGTCIWTAKDDGIY 118
                +R+R +  Y   G+   +  +  W A+DDGIY
Sbjct: 92  -----KRYRGITAYQAIGLFAKDGSSYNWLARDDGIY 118

[Close]

BLAST of CsaV3_3G018930 vs. TAIR10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-10
Identity = 37/97 (38.14%), Postives = 54/97 (55.67%), Query Frame = 0


Query: 25  VVNGLSSNSLDVHCQSKDDDLGYHHLANRGDEFQWNFQINIWGTTLFWCRLDKS---DAY 84
           V N L++  L V C+SKDD+LG  H+   G   + NF  N+W  TLFWC L K      +
Sbjct: 26  VKNELNNKVLGVRCRSKDDNLG-DHILRVGQMTKNNFDDNVWRRTLFWCNLWKGPDFKLH 85

Query: 85  VSFESFWSERRHRWLYDRCGIELG-TCIWTAKDDGIY 118
           V+F+++    R +W  D     +G   +W A++DGIY
Sbjct: 86  VAFDAY----RSQWKAD-----IGPRYLWIAREDGIY 112

[Close]

BLAST of CsaV3_3G018930 vs. Swiss-Prot
Match: sp|F4JLS0|SPH1_ARATH (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.1e-18
Identity = 48/118 (40.68%), Postives = 70/118 (59.32%), Query Frame = 0


Query: 16  PAPPRYFVHVVNGLSS-NSLDVHCQSKDDDLGYHHLANRGDEFQWNFQINIWGTTLFWCR 75
           P    + V VVNGL++  +L +HC+SK+DDLG  +L  R + F WNF  N+  +T FWC 
Sbjct: 36  PKISEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFR-NRFSWNFGENMLHSTFFWCY 95

Query: 76  LDKSDAYVSFESFWSERRHRWLYDRCGIELGTCIWTAKDDGIYLRNMLTNVDEFIHKW 133
           ++K + +++   FW +     L+ RCG +   CIWTAK DG+YL N  +  D    KW
Sbjct: 96  MNKDNGHMNVNVFWDD---VILFHRCGWK--NCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of CsaV3_3G018930 vs. Swiss-Prot
Match: sp|Q2HQ46|SPH74_ARATH (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.7e-17
Identity = 47/120 (39.17%), Postives = 69/120 (57.50%), Query Frame = 0


Query: 16  PAPPRYFVHVVNGLSS-NSLDVHCQSKDDDLGYHHLANRGDEFQWNFQINIWGTTLFWCR 75
           P    + V V NGL++  +L +HC+SK++DLG  +L    D F WNF  N+  +TLFWC 
Sbjct: 36  PKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFL-DRFSWNFGENMLHSTLFWCY 95

Query: 76  LDKSDAYVSFESFWSERRHRWLYDRCGIELGTCIWTAKDDGIYLRNMLTNVDEFIHKWIS 135
           + K D +++ + FW +     L+ RC  +   C+WTAK+DG+YL N     D    KW S
Sbjct: 96  MSKDDGHMNVKVFWDD---VILFHRC--DWKNCVWTAKNDGLYLWNSAIGEDVLSEKWKS 149

[Close]

BLAST of CsaV3_3G018930 vs. Swiss-Prot
Match: sp|Q9LW22|SPH21_ARATH (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-09
Identity = 35/97 (36.08%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 26  VNGLSSNSLDVHCQSKDDDLGYHHLANRGDEFQWNFQINIWGTTLFWCRLDKSDAYVSFE 85
           +N  + N L VHC+SK++D+G  +L   G+   ++F+ N WGTT FWC L K   Y    
Sbjct: 32  LNPKNKNILKVHCKSKNNDIGVKYL-KIGEVMSFSFKTNFWGTTEFWCNLYKGPDY---- 91

Query: 86  SFWSERRHRWL--YDRCGI---ELGTCIWTAKDDGIY 118
                +R+R +  Y   G+   +  +  W A+DDGIY
Sbjct: 92  -----KRYRGITAYQAIGLFAKDGSSYNWLARDDGIY 118

[Close]

BLAST of CsaV3_3G018930 vs. Swiss-Prot
Match: sp|Q9FI84|SPH27_ARATH (S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.9e-09
Identity = 34/100 (34.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 34  LDVHCQSKDDDLGYHHLANRGDEFQWNFQINIWGTTLFWCRLDKSDAYVSFESFWSERRH 93
           L +HC+SKDDDLG+ H+   G+ + W F +N   +TL++C    S    +   F  +R  
Sbjct: 59  LGIHCKSKDDDLGF-HIHKEGELYGWKFHVNFQNSTLYFCGF--SQGQDNKGVFDIDRAE 118

Query: 94  RWLYDRCGIELGTCIWTAKDDGIYLRNMLTNVDEFIHKWI 134
           R  Y RC      C W AK D +Y  + L     +  KW+
Sbjct: 119 RDFY-RC----RNCTWNAKKDSLYGYSNLPQTVTWFFKWL 150

[Close]

BLAST of CsaV3_3G018930 vs. Swiss-Prot
Match: sp|P0DN92|SPH24_ARATH (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.1e-09
Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 0


Query: 34  LDVHCQSKDDDLGYHHLANRGDEFQWNFQINIWGTTLFWCRLDKSDAYVSFESFWSERRH 93
           L +HC+S+DDDLG+H LA +G+ F W F +N   +TL++C    S   +    F   R +
Sbjct: 58  LGIHCKSRDDDLGFHILA-KGELFGWKFHVNFCYSTLYFCGF--SQGQMKKGVFEIYRAN 117

Query: 94  RWLYDRCGIELGTCIWTAKDDGIY 118
           R  Y RC      C W A+ DGIY
Sbjct: 118 RDFY-RC----ANCTWKAEKDGIY 133

[Close]

BLAST of CsaV3_3G018930 vs. TrEMBL
Match: tr|A0A1S3CG61|A0A1S3CG61_CUCME (uncharacterized protein LOC103500543 OS=Cucumis melo OX=3656 GN=LOC103500543 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.2e-58
Identity = 101/135 (74.81%), Postives = 115/135 (85.19%), Query Frame = 0


Query: 1   MILFEGQVLSFSRRPPAPPRYFVHVVNGLSSNSLDVHCQSKDDDLGYHHLANRGDEFQWN 60
           M+L EG+V  + + PP P RYFVHVVNGLS  SLDVHCQSK+DDLGYHHL NRGDE+QWN
Sbjct: 1   MVLVEGEVSKWLKPPPKPSRYFVHVVNGLSYQSLDVHCQSKNDDLGYHHLVNRGDEYQWN 60

Query: 61  FQINIWGTTLFWCRLDKSDAYVSFESFWSERRHRWLYDRCGIELGTCIWTAKDDGIYLRN 120
           F+ N+WGTTLFWCRL+K DAYV+FESFW E ++ WL DRCG + GTCIWTAKDDGIYLRN
Sbjct: 61  FEENLWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRDRCGNQ-GTCIWTAKDDGIYLRN 120

Query: 121 MLTNVDEFIHKWISK 136
           M TNVDEF+HKWI K
Sbjct: 121 MPTNVDEFVHKWIPK 134

[Close]

BLAST of CsaV3_3G018930 vs. TrEMBL
Match: tr|A0A1S3CHP0|A0A1S3CHP0_CUCME (uncharacterized protein LOC103500540 OS=Cucumis melo OX=3656 GN=LOC103500540 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.3e-57
Identity = 100/135 (74.07%), Postives = 113/135 (83.70%), Query Frame = 0


Query: 1   MILFEGQVLSFSRRPPAPPRYFVHVVNGLSSNSLDVHCQSKDDDLGYHHLANRGDEFQWN 60
           M+L EGQV ++S  PP   RYFVHVVNGLS ++LDVHCQSKDDDLGYH L N GD+FQWN
Sbjct: 1   MVLVEGQVPNWSEPPPQASRYFVHVVNGLSYHNLDVHCQSKDDDLGYHCLVNHGDDFQWN 60

Query: 61  FQINIWGTTLFWCRLDKSDAYVSFESFWSERRHRWLYDRCGIELGTCIWTAKDDGIYLRN 120
           F+ N WGTTLFWCRL+K DAYV+FESFW E R+ WL  RCG +LGTCIWTAKDDGIYLRN
Sbjct: 61  FRENFWGTTLFWCRLEKLDAYVAFESFWPESRNLWLRYRCGNQLGTCIWTAKDDGIYLRN 120

Query: 121 MLTNVDEFIHKWISK 136
           + TNVDEF+HKWI K
Sbjct: 121 LSTNVDEFVHKWIPK 135

[Close]

BLAST of CsaV3_3G018930 vs. TrEMBL
Match: tr|A0A1S4E5F6|A0A1S4E5F6_CUCME (uncharacterized protein LOC103503421 OS=Cucumis melo OX=3656 GN=LOC103503421 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 4.9e-57
Identity = 100/135 (74.07%), Postives = 111/135 (82.22%), Query Frame = 0


Query: 1   MILFEGQVLSFSRRPPAPPRYFVHVVNGLSSNSLDVHCQSKDDDLGYHHLANRGDEFQWN 60
           M+L EGQV  +S+ PP P RYFVHVVNGLS  SLDVHCQSKDDDLGYH L  +GDEFQWN
Sbjct: 14  MVLVEGQVSKWSKPPPLPSRYFVHVVNGLSYQSLDVHCQSKDDDLGYHRLVKQGDEFQWN 73

Query: 61  FQINIWGTTLFWCRLDKSDAYVSFESFWSERRHRWLYDRCGIELGTCIWTAKDDGIYLRN 120
           F+ N WGTTLFWCRL+K DAYV+FESFW E ++ WL  RCG + GTCIWTAKDDGIYLRN
Sbjct: 74  FEENFWGTTLFWCRLEKPDAYVAFESFWPETKNVWLRHRCGNQ-GTCIWTAKDDGIYLRN 133

Query: 121 MLTNVDEFIHKWISK 136
           M TN DEF+HKWI K
Sbjct: 134 MPTNADEFVHKWIPK 147

[Close]

BLAST of CsaV3_3G018930 vs. TrEMBL
Match: tr|A0A1S3CGQ1|A0A1S3CGQ1_CUCME (uncharacterized protein LOC103500539 OS=Cucumis melo OX=3656 GN=LOC103500539 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.0e-54
Identity = 96/134 (71.64%), Postives = 111/134 (82.84%), Query Frame = 0


Query: 2   ILFEGQVLSFSRRPPAPPRYFVHVVNGLSSNSLDVHCQSKDDDLGYHHLANRGDEFQWNF 61
           ++ EGQV  + + PP P RYFV+VVNGLS +SLDVHCQSKDDDLGYHHL N GD FQWNF
Sbjct: 13  VVVEGQVSRWKKPPPQPSRYFVNVVNGLSYHSLDVHCQSKDDDLGYHHLVNHGDYFQWNF 72

Query: 62  QINIWGTTLFWCRLDKSDAYVSFESFWSERRHRWLYDRCGIELGTCIWTAKDDGIYLRNM 121
           + N +GTTLFWCRL+KSDAYV+FESFW E  +RWL DRCG + GTC+W AKDDGIYLRN+
Sbjct: 73  EENFFGTTLFWCRLEKSDAYVAFESFWPESTNRWLRDRCGNQ-GTCVWIAKDDGIYLRNI 132

Query: 122 LTNVDEFIHKWISK 136
             NVDE +HKWISK
Sbjct: 133 PVNVDELVHKWISK 145

[Close]

BLAST of CsaV3_3G018930 vs. TrEMBL
Match: tr|A0A1S3C8C8|A0A1S3C8C8_CUCME (uncharacterized protein LOC103497646 OS=Cucumis melo OX=3656 GN=LOC103497646 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.2e-50
Identity = 86/133 (64.66%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 1   MILFEGQVLSFSRRPPAPPRYFVHVVNGLSSNSLDVHCQSKDDDLGYHHLANRGDEFQWN 60
           ++  + +VL  +  PP+  RY++HV+NGLS+  L VHCQSKDDDLGYHHLANRGD++QWN
Sbjct: 2   VVFVKARVLRMTLPPPSVTRYYIHVMNGLSNADLIVHCQSKDDDLGYHHLANRGDDYQWN 61

Query: 61  FQINIWGTTLFWCRLDKSDAYVSFESFWSERRHRWLYDRCGIELGTCIWTAKDDGIYLRN 120
           F+ N W TTLFWC+L+K + +VSFESFW E +  WL DRCG + GTCIWTAKDDGIYLRN
Sbjct: 62  FKENFWQTTLFWCKLEKQNVHVSFESFWPESKSTWLRDRCGYQ-GTCIWTAKDDGIYLRN 121

Query: 121 MLTNVDEFIHKWI 134
           M  N+DEF+HKWI
Sbjct: 122 MPANIDEFVHKWI 133

The following BLAST results are available for this feature:

BLAST of CsaV3_3G018930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462115.1	1.7e-58	74.81	PREDICTED: uncharacterized protein LOC103500543 [Cucumis melo]	[more]
XP_008462111.1	1.9e-57	74.07	PREDICTED: uncharacterized protein LOC103500540 [Cucumis melo]	[more]
XP_016903452.1	7.3e-57	74.07	PREDICTED: uncharacterized protein LOC103503421 [Cucumis melo]	[more]
XP_004139731.1	9.6e-57	71.85	PREDICTED: uncharacterized protein LOC101207655 [Cucumis sativus]	[more]
XP_008462110.1	1.5e-54	71.64	PREDICTED: uncharacterized protein LOC103500539 [Cucumis melo]	[more]

BLAST of CsaV3_3G018930 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G16295.1	1.1e-19	40.68	S-protein homologue 1	[more]
AT4G29035.1	9.7e-19	39.17	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	2.5e-11	35.48	Plant self-incompatibility protein S1 family	[more]
AT3G26880.1	9.7e-11	36.08	Plant self-incompatibility protein S1 family	[more]
AT5G04347.1	1.7e-10	38.14	Plant self-incompatibility protein S1 family	[more]

BLAST of CsaV3_3G018930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4JLS0\|SPH1_ARATH	2.1e-18	40.68	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
sp\|Q2HQ46\|SPH74_ARATH	1.7e-17	39.17	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
sp\|Q9LW22\|SPH21_ARATH	1.7e-09	36.08	S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1	[more]
sp\|Q9FI84\|SPH27_ARATH	3.9e-09	34.00	S-protein homolog 27 OS=Arabidopsis thaliana OX=3702 GN=SPH27 PE=2 SV=1	[more]
sp\|P0DN92\|SPH24_ARATH	5.1e-09	40.48	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]

BLAST of CsaV3_3G018930 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CG61\|A0A1S3CG61_CUCME	1.2e-58	74.81	uncharacterized protein LOC103500543 OS=Cucumis melo OX=3656 GN=LOC103500543 PE=...	[more]
tr\|A0A1S3CHP0\|A0A1S3CHP0_CUCME	1.3e-57	74.07	uncharacterized protein LOC103500540 OS=Cucumis melo OX=3656 GN=LOC103500540 PE=...	[more]
tr\|A0A1S4E5F6\|A0A1S4E5F6_CUCME	4.9e-57	74.07	uncharacterized protein LOC103503421 OS=Cucumis melo OX=3656 GN=LOC103503421 PE=...	[more]
tr\|A0A1S3CGQ1\|A0A1S3CGQ1_CUCME	1.0e-54	71.64	uncharacterized protein LOC103500539 OS=Cucumis melo OX=3656 GN=LOC103500539 PE=...	[more]
tr\|A0A1S3C8C8\|A0A1S3C8C8_CUCME	1.2e-50	64.66	uncharacterized protein LOC103497646 OS=Cucumis melo OX=3656 GN=LOC103497646 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010264	Self-incomp_S1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G018930.1	CsaV3_3G018930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05938	Self-incomp_S1	coord: 23..132 e-value: 2.0E-25 score: 89.2
None	No IPR available	PANTHER	PTHR31232:SF7	S PROTEIN HOMOLOGUE 74-RELATED	coord: 19..133
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 19..133

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G018930	Cucsa.049500	Cucumber (Gy14) v1	cgycucB030

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G018930	Watermelon (Charleston Gray)	cucwcgB228
CsaV3_3G018930	Watermelon (Charleston Gray)	cucwcgB238
CsaV3_3G018930	Watermelon (97103) v1	cucwmB243
CsaV3_3G018930	Watermelon (97103) v1	cucwmB252
CsaV3_3G018930	Watermelon (97103) v2	cucwmbB209
CsaV3_3G018930	Watermelon (97103) v2	cucwmbB217
CsaV3_3G018930	Wax gourd	cucwgoB284
CsaV3_3G018930	Wax gourd	cucwgoB287
CsaV3_3G018930	Silver-seed gourd	carcucB0070
CsaV3_3G018930	Silver-seed gourd	carcucB0071
CsaV3_3G018930	Silver-seed gourd	carcucB0687
CsaV3_3G018930	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G018930	Cucumber (Gy14) v1	cgycucB006
CsaV3_3G018930	Cucurbita maxima (Rimu)	cmacucB0373
CsaV3_3G018930	Cucurbita maxima (Rimu)	cmacucB0386
CsaV3_3G018930	Cucurbita maxima (Rimu)	cmacucB0840
CsaV3_3G018930	Cucurbita maxima (Rimu)	cmacucB0829
CsaV3_3G018930	Cucurbita moschata (Rifu)	cmocucB0383
CsaV3_3G018930	Cucurbita moschata (Rifu)	cmocucB0370
CsaV3_3G018930	Cucurbita moschata (Rifu)	cmocucB0814
CsaV3_3G018930	Cucurbita moschata (Rifu)	cmocucB0825
CsaV3_3G018930	Cucurbita pepo (Zucchini)	cpecucB0247
CsaV3_3G018930	Cucurbita pepo (Zucchini)	cpecucB0261
CsaV3_3G018930	Cucurbita pepo (Zucchini)	cpecucB0484
CsaV3_3G018930	Cucurbita pepo (Zucchini)	cpecucB0494
CsaV3_3G018930	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G018930	Bottle gourd (USVL1VR-Ls)	cuclsiB224
CsaV3_3G018930	Bottle gourd (USVL1VR-Ls)	cuclsiB230
CsaV3_3G018930	Melon (DHL92) v3.5.1	cucmeB240
CsaV3_3G018930	Melon (DHL92) v3.5.1	cucmeB247
CsaV3_3G018930	Melon (DHL92) v3.6.1	cucmedB240
CsaV3_3G018930	Melon (DHL92) v3.6.1	cucmedB246