CsaV3_3G018530 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCCATGGAACATCGCAAAGACGGCGGAGGCGATGTTCTCAAAATTCGCCGTTAAAAGGCTGTGCAAATTTCTACTCAAAAAGAAATTGGGACAGTTTTTGTTGGGAGAAATTGATATCGACCAGCTTGACGTGCAGCTTGCCGATGGCACAATTCAGCTCAACGACCTTGCCCTCAACGTTGATTTTCTCAATGAGAAGGTTTGTTTGTTTGTTTTTTACTTTTTTTTTTCCCCACTTTTTATTTTTTAACGGGGGCATTGGAGAGTGTTGCTCCAATATGAGCGTGGAGGAAAAGTGTTCGGTGAAGTTAAATGGGGAAAAATGATAGAGATGGCTTTGTGTGAAAGGAAATTTATGGGATTGAAAGGTGTGATTAACTGAGGGTTTTATCAAGGTGGCAAACAAAGGGCATAATGACCAACGAAGCTGACACTGAATTTTACCTCGACCAGAAGTTTGTGAGCAATTACCCCAACGCTCCTGCTGATTGAGCCATTGCGAACCAAGAATTCCAGAAATTTGATTAAAAATTTTGTTTACTGTTTTTGAAAAAAAAAAAAAAGATTCAGCCTTTGTTTCTCCATGATAGATGGTTGAATTGTTTAGTTTGGTAGATAAGGATTGAGAGACATTTGGTATCATTTAAGGGATTATCAAAATCTGTTAGGAATGGAGGCAAAGGAGGGTGGTTGATACATGCCAACCCGAGGTTGAGGAGTGGTAAAAACAGAGGGTGTAGAGCAAAAATAGTTGTTGTCGGTGGAAATAGGACAGGATTAATTGAGACATTTGGGGTTACCCGTCAGCAAACAGTGGGATGGGCATAA ATGTTTCCATGGAACATCGCAAAGACGGCGGAGGCGATGTTCTCAAAATTCGCCGTTAAAAGGCTGTGCAAATTTCTACTCAAAAAGAAATTGGGACAGTTTTTGTTGGGAGAAATTGATATCGACCAGCTTGACGTGCAGCTTGCCGATGGCACAATTCAGCTCAACGACCTTGCCCTCAACATAAGGATTGAGAGACATTTGGTATCATTTAAGGGATTATCAAAATCTGTTAGGAATGGAGGCAAAGGAGGGTGGTTGATACATGCCAACCCGAGGTTGAGGAGTGGTAAAAACAGAGGGTGTAGAGCAAAAATAGTTGTTGTCGGTGGAAATAGGACAGGATTAATTGAGACATTTGGGGTTACCCGTCAGCAAACAGTGGGATGGGCATAA ATGTTTCCATGGAACATCGCAAAGACGGCGGAGGCGATGTTCTCAAAATTCGCCGTTAAAAGGCTGTGCAAATTTCTACTCAAAAAGAAATTGGGACAGTTTTTGTTGGGAGAAATTGATATCGACCAGCTTGACGTGCAGCTTGCCGATGGCACAATTCAGCTCAACGACCTTGCCCTCAACATAAGGATTGAGAGACATTTGGTATCATTTAAGGGATTATCAAAATCTGTTAGGAATGGAGGCAAAGGAGGGTGGTTGATACATGCCAACCCGAGGTTGAGGAGTGGTAAAAACAGAGGGTGTAGAGCAAAAATAGTTGTTGTCGGTGGAAATAGGACAGGATTAATTGAGACATTTGGGGTTACCCGTCAGCAAACAGTGGGATGGGCATAA MFPWNIAKTAEAMFSKFAVKRLCKFLLKKKLGQFLLGEIDIDQLDVQLADGTIQLNDLALNIRIERHLVSFKGLSKSVRNGGKGGWLIHANPRLRSGKNRGCRAKIVVVGGNRTGLIETFGVTRQQTVGWA
BLAST of CsaV3_3G018530 vs. NCBI nr
Match: XP_011651243.1 (PREDICTED: uncharacterized protein LOC101223109 isoform X1 [Cucumis sativus] >KGN57532.1 hypothetical protein Csa_3G207330 [Cucumis sativus]) HSP 1 Score: 124.4 bits (311), Expect = 2.9e-25 Identity = 73/108 (67.59%), Postives = 78/108 (72.22%), Query Frame = 0
BLAST of CsaV3_3G018530 vs. NCBI nr
Match: XP_011651244.1 (PREDICTED: uncharacterized protein LOC101223109 isoform X2 [Cucumis sativus]) HSP 1 Score: 124.4 bits (311), Expect = 2.9e-25 Identity = 73/108 (67.59%), Postives = 78/108 (72.22%), Query Frame = 0
BLAST of CsaV3_3G018530 vs. NCBI nr
Match: XP_008456130.1 (PREDICTED: autophagy-related protein 2 isoform X1 [Cucumis melo]) HSP 1 Score: 123.6 bits (309), Expect = 4.9e-25 Identity = 70/106 (66.04%), Postives = 76/106 (71.70%), Query Frame = 0
BLAST of CsaV3_3G018530 vs. NCBI nr
Match: XP_008456131.1 (PREDICTED: autophagy-related protein 2 isoform X2 [Cucumis melo]) HSP 1 Score: 123.6 bits (309), Expect = 4.9e-25 Identity = 70/106 (66.04%), Postives = 76/106 (71.70%), Query Frame = 0
BLAST of CsaV3_3G018530 vs. NCBI nr
Match: XP_022942300.1 (autophagy-related protein 2 isoform X2 [Cucurbita moschata]) HSP 1 Score: 119.8 bits (299), Expect = 7.1e-24 Identity = 69/106 (65.09%), Postives = 75/106 (70.75%), Query Frame = 0
BLAST of CsaV3_3G018530 vs. TAIR10
Match: AT3G19190.1 (autophagy 2) HSP 1 Score: 96.7 bits (239), Expect = 1.2e-20 Identity = 44/62 (70.97%), Postives = 57/62 (91.94%), Query Frame = 0
BLAST of CsaV3_3G018530 vs. Swiss-Prot
Match: sp|F8S296|ATG2_ARATH (Autophagy-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=ATG2 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 2.1e-19 Identity = 44/62 (70.97%), Postives = 57/62 (91.94%), Query Frame = 0
BLAST of CsaV3_3G018530 vs. TrEMBL
Match: tr|A0A0A0LAA0|A0A0A0LAA0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G207330 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.9e-25 Identity = 73/108 (67.59%), Postives = 78/108 (72.22%), Query Frame = 0
BLAST of CsaV3_3G018530 vs. TrEMBL
Match: tr|A0A1S3C2I1|A0A1S3C2I1_CUCME (autophagy-related protein 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496161 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 3.2e-25 Identity = 70/106 (66.04%), Postives = 76/106 (71.70%), Query Frame = 0
BLAST of CsaV3_3G018530 vs. TrEMBL
Match: tr|A0A1S3C375|A0A1S3C375_CUCME (autophagy-related protein 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496161 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 3.2e-25 Identity = 70/106 (66.04%), Postives = 76/106 (71.70%), Query Frame = 0
BLAST of CsaV3_3G018530 vs. TrEMBL
Match: tr|W9SML8|W9SML8_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_027544 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22 Identity = 63/106 (59.43%), Postives = 77/106 (72.64%), Query Frame = 0
BLAST of CsaV3_3G018530 vs. TrEMBL
Match: tr|A0A2P5CQS3|A0A2P5CQS3_9ROSA (Autophagy-related protein OS=Trema orientalis OX=63057 GN=TorRG33x02_276320 PE=4 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 3.4e-22 Identity = 61/106 (57.55%), Postives = 75/106 (70.75%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |