CsaV3_3G018460 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G018460
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr3 : 14187730 .. 14190293 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAAATTTTTAAAACATGAAAAAAAACAGAAGTAATAAAATACATTACCCAACCTCTGTTTTTCTCAACTCCATGATCAAAATTTGAATGGGTAAGCATGAATTTGAATCAGGAAAATAGTAATTGAACTAAACAAAGAAAGGGGAGATTTTAGTAATGTGTGTGACGTGGCATTTTTTCAAAAATAGAAAAAAAATATATAAATATTCTCTCTCCTCACAGTCTATTTTTCCCAAGGGGAAATAATCATTTGGGTGTGGAGAGGTGCGAATGTGGGAACCCACTTCCCAATTTGGAGATCCATTTCCATTGCCAACCATTTCTTTCTCTTCCAATCTCCTTCTGCCTCCTCTTCTTCCTCTTCTTCCTCTTCTTCCTCTTCCTCATGGCCACCAATAAGCCAAAGGAAGAACAGAGGTCAAGGAAGCCCCGCCATCGGAGGAACCAACAGATGGAAGAATTCCCCACTTTCACCAAATGGCTTACCACTTTTGGTCATTCAGGTTCTTGCAACGATGCCAAATCCAAATCCAAGCAACTTAATCCTGCCAATCGCCCTCTTCAAAGGCCCCCTGTCGTCCTTCCAGCTTCCTCAGAGGATGCTGTGCCGGTTGTCACCAATGTTCCCGAGGAGGAAGGAGTGCAGACTATGGCTGTGGATGGTTCTATATCTGCGCGAGGGGGTGCGGGTTGTTGCTGTTGGCAAAGTTCCAAATCCACGCGGCGGGAGTGTGCGCTTAAATTCCATATCTCTTTAAGAAAGAGAAAGGTGGTTGCTAATTCTACAGAGGCAGAGGTTGTTGCTGCCGTTTTGAATCCGCCGGAGGAGGCGACGGTGGAGGATGTCAAGGACGGGTGTGGTTGTAGGTGTTTGCGAACGTTTAAGATCTTCAGAAGAAGAAAAAGCAGGGTCGTCGGTGTTTCGGATCTTCAAAAAGAGGAGGGAGCGGTTACCGACGGCGTGAATCTACGGACAGAGGAAGTGGCTTCTAGTGGTTCAGACATGATGAAGGAAGAGGAAGTCGTCATCGCACCAGATCGGCGCAAGGAAGAGGAGAGTGGTTGCTGTTGTGGAAGATGGAAATGTTCGCCGACGTTTCAGATTTGCAGGAGGAGGAAAGTTGTTGCCGGTAAGGAGGAGGTAGTTGGCGGTGCTCCAAAGGTAGAAGAAGTGGGTAATGATAATGTAACTAAACAAGAAGAGGATTCAGTGGGATGCTTGCAAGCATTTCACATCTGCGGAGGGAGGAAAAGAGTAGACGACAATCCAAAGACATCGGAAAAGGAGCCGTTGGTTTCCAACGATTCTTCAAATCTCGACGTTCAAAATTTGCAGAAAGAAGAGAGTGGGTGCTGCAGTTGTTTTAGATGTATACCGACATTCCAAATCTGCGGAGGGCGGAGGAGTAATGAGGATTCTGGCGTTCCAAAACCAGGCAGGGAAGAGAAAGTGATTGTCGATGTTTCAGATCCGCCAGAGATGGGGTCTGTCGTTGACGGAAGGGAACGACATTCCAGACCCGTTCAAGGGGGAACTTGTTGGTCAGGATGGTTTCCTAGGTTTTTGCTCTGTGGGGAAGGGACGGCCGTTGATGCCCCAAACCATCGAGAGGAAGAAGAAAAGGCACCTTCCGACGCTCGTAAGGAGGAGAAGGTTGTTGTCGCCACTGCAGTGGGTGACGAAATTTCAGATCACGACAAGGAGAAACCGGTGGCTGCCATCGACATTCCTGTTGTTAATGAGGAGGAGGTGTTTGTCGGTGCCGGTGACACTCTTGATCTTCACAAGGAAAAGAATGTATCTTCCTGCAACATTCAGGATGTTCGAAAGGAGGAAATTGTGGATTCCGACGAGAAGGTGGAGGGTGGTGGTTGCGGTTGTTGGGGAAAAGAGAGTGGTAGCCGCCAACAGCACCGAAGTTCTAGATCTATGGAAGGATGTTGGTCATTCCAGATCTGCGGGAGGGGGTGCCTACCAACACTAAACATTTGCAGAGGGAGAAAAGATGTATCTGTTAGGATTTCAAAATTGGTTGAAGAAGGGTTGGTCGACAATGACGTTTCAGATGTTCATAAAGAGGTGGTGGATGCCACCGGCGTTACGGACGTGGTGGCTGGAAGCGATAATTCGAAATGTAGGAGAGGATGTGGTTGTTGGAATTTGAAATCAAGACGGAGGAGGGCGGTGGCTGTAGATAAGGAGGGCGGAAGCGGTCGACGATCTAAATTTAAGGGTAGAAAAGGCCGAGGGGGGTGGCTACGACGATCGAGAAGGAAAGAAAGAGAGGGAAAGGAAAAAAACAGATAGAAAAAGAAATTTAAATTTTTTTCATTTTTTTAAAATGATTTGTTTAGCAAAATTAATGAAAAAAAAAGAAAATTATTATTTTGTCACCTCAGCTTGTTTAATGAATAATGTATAGAGTTAATTAAAGGAAAATGTTTCTTGATCCAATGGGCTACTTACTAAATTCAGATAATAGTGAGAATTAAATAGTATCATTCAATCATAATCACTCCCATTTAACTGACTAAACTTTATAATAACCAAAAGAATTAAGAT

mRNA sequence

ATGGCCACCAATAAGCCAAAGGAAGAACAGAGGTCAAGGAAGCCCCGCCATCGGAGGAACCAACAGATGGAAGAATTCCCCACTTTCACCAAATGGCTTACCACTTTTGGTCATTCAGGTTCTTGCAACGATGCCAAATCCAAATCCAAGCAACTTAATCCTGCCAATCGCCCTCTTCAAAGGCCCCCTGTCGTCCTTCCAGCTTCCTCAGAGGATGCTGTGCCGGTTGTCACCAATGTTCCCGAGGAGGAAGGAGTGCAGACTATGGCTGTGGATGGTTCTATATCTGCGCGAGGGGGTGCGGGTTGTTGCTGTTGGCAAAGTTCCAAATCCACGCGGCGGGAGTGTGCGCTTAAATTCCATATCTCTTTAAGAAAGAGAAAGGTGGTTGCTAATTCTACAGAGGCAGAGGTTGTTGCTGCCGTTTTGAATCCGCCGGAGGAGGCGACGGTGGAGGATGTCAAGGACGGGTGTGGTTGTAGGTGTTTGCGAACGTTTAAGATCTTCAGAAGAAGAAAAAGCAGGGTCGTCGGTGTTTCGGATCTTCAAAAAGAGGAGGGAGCGGTTACCGACGGCGTGAATCTACGGACAGAGGAAGTGGCTTCTAGTGGTTCAGACATGATGAAGGAAGAGGAAGTCGTCATCGCACCAGATCGGCGCAAGGAAGAGGAGAGTGGTTGCTGTTGTGGAAGATGGAAATGTTCGCCGACGTTTCAGATTTGCAGGAGGAGGAAAGTTGTTGCCGGTAAGGAGGAGGTAGTTGGCGGTGCTCCAAAGGTAGAAGAAGTGGGTAATGATAATGTAACTAAACAAGAAGAGGATTCAGTGGGATGCTTGCAAGCATTTCACATCTGCGGAGGGAGGAAAAGAGTAGACGACAATCCAAAGACATCGGAAAAGGAGCCGTTGGTTTCCAACGATTCTTCAAATCTCGACGTTCAAAATTTGCAGAAAGAAGAGAGTGGGTGCTGCAGTTGTTTTAGATGTATACCGACATTCCAAATCTGCGGAGGGCGGAGGAGTAATGAGGATTCTGGCGTTCCAAAACCAGGCAGGGAAGAGAAAGTGATTGTCGATGTTTCAGATCCGCCAGAGATGGGGTCTGTCGTTGACGGAAGGGAACGACATTCCAGACCCGTTCAAGGGGGAACTTGTTGGTCAGGATGGTTTCCTAGGTTTTTGCTCTGTGGGGAAGGGACGGCCGTTGATGCCCCAAACCATCGAGAGGAAGAAGAAAAGGCACCTTCCGACGCTCGTAAGGAGGAGAAGGTTGTTGTCGCCACTGCAGTGGGTGACGAAATTTCAGATCACGACAAGGAGAAACCGGTGGCTGCCATCGACATTCCTGTTGTTAATGAGGAGGAGGTGTTTGTCGGTGCCGGTGACACTCTTGATCTTCACAAGGAAAAGAATGTATCTTCCTGCAACATTCAGGATGTTCGAAAGGAGGAAATTGTGGATTCCGACGAGAAGGTGGAGGGTGGTGGTTGCGGTTGTTGGGGAAAAGAGAGTGGTAGCCGCCAACAGCACCGAAGTTCTAGATCTATGGAAGGATGTTGGTCATTCCAGATCTGCGGGAGGGGGTGCCTACCAACACTAAACATTTGCAGAGGGAGAAAAGATGTATCTGTTAGGATTTCAAAATTGGTTGAAGAAGGGTTGGTCGACAATGACGTTTCAGATGTTCATAAAGAGGTGGTGGATGCCACCGGCGTTACGGACGTGGTGGCTGGAAGCGATAATTCGAAATGTAGGAGAGGATGTGGTTGTTGGAATTTGAAATCAAGACGGAGGAGGGCGGTGGCTGTAGATAAGGAGGGCGGAAGCGGTCGACGATCTAAATTTAAGGGTAGAAAAGGCCGAGGGGGGTGGCTACGACGATCGAGAAGGAAAGAAAGAGAGGGAAAGGAAAAAAACAGATAG

Coding sequence (CDS)

ATGGCCACCAATAAGCCAAAGGAAGAACAGAGGTCAAGGAAGCCCCGCCATCGGAGGAACCAACAGATGGAAGAATTCCCCACTTTCACCAAATGGCTTACCACTTTTGGTCATTCAGGTTCTTGCAACGATGCCAAATCCAAATCCAAGCAACTTAATCCTGCCAATCGCCCTCTTCAAAGGCCCCCTGTCGTCCTTCCAGCTTCCTCAGAGGATGCTGTGCCGGTTGTCACCAATGTTCCCGAGGAGGAAGGAGTGCAGACTATGGCTGTGGATGGTTCTATATCTGCGCGAGGGGGTGCGGGTTGTTGCTGTTGGCAAAGTTCCAAATCCACGCGGCGGGAGTGTGCGCTTAAATTCCATATCTCTTTAAGAAAGAGAAAGGTGGTTGCTAATTCTACAGAGGCAGAGGTTGTTGCTGCCGTTTTGAATCCGCCGGAGGAGGCGACGGTGGAGGATGTCAAGGACGGGTGTGGTTGTAGGTGTTTGCGAACGTTTAAGATCTTCAGAAGAAGAAAAAGCAGGGTCGTCGGTGTTTCGGATCTTCAAAAAGAGGAGGGAGCGGTTACCGACGGCGTGAATCTACGGACAGAGGAAGTGGCTTCTAGTGGTTCAGACATGATGAAGGAAGAGGAAGTCGTCATCGCACCAGATCGGCGCAAGGAAGAGGAGAGTGGTTGCTGTTGTGGAAGATGGAAATGTTCGCCGACGTTTCAGATTTGCAGGAGGAGGAAAGTTGTTGCCGGTAAGGAGGAGGTAGTTGGCGGTGCTCCAAAGGTAGAAGAAGTGGGTAATGATAATGTAACTAAACAAGAAGAGGATTCAGTGGGATGCTTGCAAGCATTTCACATCTGCGGAGGGAGGAAAAGAGTAGACGACAATCCAAAGACATCGGAAAAGGAGCCGTTGGTTTCCAACGATTCTTCAAATCTCGACGTTCAAAATTTGCAGAAAGAAGAGAGTGGGTGCTGCAGTTGTTTTAGATGTATACCGACATTCCAAATCTGCGGAGGGCGGAGGAGTAATGAGGATTCTGGCGTTCCAAAACCAGGCAGGGAAGAGAAAGTGATTGTCGATGTTTCAGATCCGCCAGAGATGGGGTCTGTCGTTGACGGAAGGGAACGACATTCCAGACCCGTTCAAGGGGGAACTTGTTGGTCAGGATGGTTTCCTAGGTTTTTGCTCTGTGGGGAAGGGACGGCCGTTGATGCCCCAAACCATCGAGAGGAAGAAGAAAAGGCACCTTCCGACGCTCGTAAGGAGGAGAAGGTTGTTGTCGCCACTGCAGTGGGTGACGAAATTTCAGATCACGACAAGGAGAAACCGGTGGCTGCCATCGACATTCCTGTTGTTAATGAGGAGGAGGTGTTTGTCGGTGCCGGTGACACTCTTGATCTTCACAAGGAAAAGAATGTATCTTCCTGCAACATTCAGGATGTTCGAAAGGAGGAAATTGTGGATTCCGACGAGAAGGTGGAGGGTGGTGGTTGCGGTTGTTGGGGAAAAGAGAGTGGTAGCCGCCAACAGCACCGAAGTTCTAGATCTATGGAAGGATGTTGGTCATTCCAGATCTGCGGGAGGGGGTGCCTACCAACACTAAACATTTGCAGAGGGAGAAAAGATGTATCTGTTAGGATTTCAAAATTGGTTGAAGAAGGGTTGGTCGACAATGACGTTTCAGATGTTCATAAAGAGGTGGTGGATGCCACCGGCGTTACGGACGTGGTGGCTGGAAGCGATAATTCGAAATGTAGGAGAGGATGTGGTTGTTGGAATTTGAAATCAAGACGGAGGAGGGCGGTGGCTGTAGATAAGGAGGGCGGAAGCGGTCGACGATCTAAATTTAAGGGTAGAAAAGGCCGAGGGGGGTGGCTACGACGATCGAGAAGGAAAGAAAGAGAGGGAAAGGAAAAAAACAGATAG

Protein sequence

MATNKPKEEQRSRKPRHRRNQQMEEFPTFTKWLTTFGHSGSCNDAKSKSKQLNPANRPLQRPPVVLPASSEDAVPVVTNVPEEEGVQTMAVDGSISARGGAGCCCWQSSKSTRRECALKFHISLRKRKVVANSTEAEVVAAVLNPPEEATVEDVKDGCGCRCLRTFKIFRRRKSRVVGVSDLQKEEGAVTDGVNLRTEEVASSGSDMMKEEEVVIAPDRRKEEESGCCCGRWKCSPTFQICRRRKVVAGKEEVVGGAPKVEEVGNDNVTKQEEDSVGCLQAFHICGGRKRVDDNPKTSEKEPLVSNDSSNLDVQNLQKEESGCCSCFRCIPTFQICGGRRSNEDSGVPKPGREEKVIVDVSDPPEMGSVVDGRERHSRPVQGGTCWSGWFPRFLLCGEGTAVDAPNHREEEEKAPSDARKEEKVVVATAVGDEISDHDKEKPVAAIDIPVVNEEEVFVGAGDTLDLHKEKNVSSCNIQDVRKEEIVDSDEKVEGGGCGCWGKESGSRQQHRSSRSMEGCWSFQICGRGCLPTLNICRGRKDVSVRISKLVEEGLVDNDVSDVHKEVVDATGVTDVVAGSDNSKCRRGCGCWNLKSRRRRAVAVDKEGGSGRRSKFKGRKGRGGWLRRSRRKEREGKEKNR

Homology

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BLAST of CsaV3_3G018460 vs. NCBI nr
Match: KGN57524.1 (hypothetical protein Csa_3G204780 [Cucumis sativus])

HSP 1 Score: 1187.2 bits (3070), Expect = 0.0e+00
Identity = 640/640 (100.00%), Postives = 640/640 (100.00%), Query Frame = 0


Query: 1   MATNKPKEEQRSRKPRHRRNQQMEEFPTFTKWLTTFGHSGSCNDAKSKSKQLNPANRPLQ 60
           MATNKPKEEQRSRKPRHRRNQQMEEFPTFTKWLTTFGHSGSCNDAKSKSKQLNPANRPLQ
Sbjct: 1   MATNKPKEEQRSRKPRHRRNQQMEEFPTFTKWLTTFGHSGSCNDAKSKSKQLNPANRPLQ 60

Query: 61  RPPVVLPASSEDAVPVVTNVPEEEGVQTMAVDGSISARGGAGCCCWQSSKSTRRECALKF 120
           RPPVVLPASSEDAVPVVTNVPEEEGVQTMAVDGSISARGGAGCCCWQSSKSTRRECALKF
Sbjct: 61  RPPVVLPASSEDAVPVVTNVPEEEGVQTMAVDGSISARGGAGCCCWQSSKSTRRECALKF 120

Query: 121 HISLRKRKVVANSTEAEVVAAVLNPPEEATVEDVKDGCGCRCLRTFKIFRRRKSRVVGVS 180
           HISLRKRKVVANSTEAEVVAAVLNPPEEATVEDVKDGCGCRCLRTFKIFRRRKSRVVGVS
Sbjct: 121 HISLRKRKVVANSTEAEVVAAVLNPPEEATVEDVKDGCGCRCLRTFKIFRRRKSRVVGVS 180

Query: 181 DLQKEEGAVTDGVNLRTEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWKCSPTFQI 240
           DLQKEEGAVTDGVNLRTEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWKCSPTFQI
Sbjct: 181 DLQKEEGAVTDGVNLRTEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWKCSPTFQI 240

Query: 241 CRRRKVVAGKEEVVGGAPKVEEVGNDNVTKQEEDSVGCLQAFHICGGRKRVDDNPKTSEK 300
           CRRRKVVAGKEEVVGGAPKVEEVGNDNVTKQEEDSVGCLQAFHICGGRKRVDDNPKTSEK
Sbjct: 241 CRRRKVVAGKEEVVGGAPKVEEVGNDNVTKQEEDSVGCLQAFHICGGRKRVDDNPKTSEK 300

Query: 301 EPLVSNDSSNLDVQNLQKEESGCCSCFRCIPTFQICGGRRSNEDSGVPKPGREEKVIVDV 360
           EPLVSNDSSNLDVQNLQKEESGCCSCFRCIPTFQICGGRRSNEDSGVPKPGREEKVIVDV
Sbjct: 301 EPLVSNDSSNLDVQNLQKEESGCCSCFRCIPTFQICGGRRSNEDSGVPKPGREEKVIVDV 360

Query: 361 SDPPEMGSVVDGRERHSRPVQGGTCWSGWFPRFLLCGEGTAVDAPNHREEEEKAPSDARK 420
           SDPPEMGSVVDGRERHSRPVQGGTCWSGWFPRFLLCGEGTAVDAPNHREEEEKAPSDARK
Sbjct: 361 SDPPEMGSVVDGRERHSRPVQGGTCWSGWFPRFLLCGEGTAVDAPNHREEEEKAPSDARK 420

Query: 421 EEKVVVATAVGDEISDHDKEKPVAAIDIPVVNEEEVFVGAGDTLDLHKEKNVSSCNIQDV 480
           EEKVVVATAVGDEISDHDKEKPVAAIDIPVVNEEEVFVGAGDTLDLHKEKNVSSCNIQDV
Sbjct: 421 EEKVVVATAVGDEISDHDKEKPVAAIDIPVVNEEEVFVGAGDTLDLHKEKNVSSCNIQDV 480

Query: 481 RKEEIVDSDEKVEGGGCGCWGKESGSRQQHRSSRSMEGCWSFQICGRGCLPTLNICRGRK 540
           RKEEIVDSDEKVEGGGCGCWGKESGSRQQHRSSRSMEGCWSFQICGRGCLPTLNICRGRK
Sbjct: 481 RKEEIVDSDEKVEGGGCGCWGKESGSRQQHRSSRSMEGCWSFQICGRGCLPTLNICRGRK 540

Query: 541 DVSVRISKLVEEGLVDNDVSDVHKEVVDATGVTDVVAGSDNSKCRRGCGCWNLKSRRRRA 600
           DVSVRISKLVEEGLVDNDVSDVHKEVVDATGVTDVVAGSDNSKCRRGCGCWNLKSRRRRA
Sbjct: 541 DVSVRISKLVEEGLVDNDVSDVHKEVVDATGVTDVVAGSDNSKCRRGCGCWNLKSRRRRA 600

Query: 601 VAVDKEGGSGRRSKFKGRKGXXXXXXXXXXXXXEGKEKNR 641
           VAVDKEGGSGRRSKFKGRKGXXXXXXXXXXXXXEGKEKNR
Sbjct: 601 VAVDKEGGSGRRSKFKGRKGXXXXXXXXXXXXXEGKEKNR 640

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BLAST of CsaV3_3G018460 vs. NCBI nr
Match: XP_022922695.1 (uncharacterized protein LOC111430613 isoform X4 [Cucurbita moschata])

HSP 1 Score: 194.5 bits (493), Expect = 1.1e-45
Identity = 240/867 (27.68%), Postives = 304/867 (35.06%), Query Frame = 0


Query: 3   TNKPKEEQRSRKPRHRRNQQMEEFPTFTKWLTTFGHSGSCNDAKSKSKQLNPANRPLQRP 62
           T+K KE+ + +K  HRRN Q+EEFPTFTKWL   G S S +D  SKS +      P++R 
Sbjct: 4   TDKQKEDGKPKKKCHRRNLQIEEFPTFTKWLGPRGRSSSRDDTSSKSYKRGVPYPPVRRI 63

Query: 63  PVVLPASSEDAVPVVTNVPEEEGVQTMAVDGSISARGGAGCCCWQSSKSTRRECALKFHI 122
           P    +S      V  +V +E+G   +A+  SISARG  GCCCWQ SKST+REC L FH 
Sbjct: 64  P--RDSSXXXXXXVACDVSKEDG--GVAIGESISARG--GCCCWQRSKSTQRECGLNFHF 123

Query: 123 SLRKRKVVANSTEAEVVAAVLNPPEEATVED----VKDGCGCRCLRTFKIFRRRKSRVVG 182
           SLRK KVV N +E  V A V +  EE  VE      ++GCGCRC  TF I  RRK    G
Sbjct: 124 SLRKSKVVTNVSEG-VAAGVSDVREEQVVEAGAVINREGCGCRCSPTFHICGRRKVPPTG 183

Query: 183 VS--------------------------DLQKEEGAVTDGVNL----------------- 242
           VS                          +L KEEG  TDG ++                 
Sbjct: 184 VSYLPEKRSGRRKSRSIRRRGLPVVDAPNLHKEEGPATDGPDVLKXXXXXXXXXXXXXXX 243

Query: 243 ---------------------------------------------------RTEEXXXXX 302
                                                                E      
Sbjct: 244 XXXXXXXXXXXXRSCCSQWKCLPSFPMCGRKLSVVEEEVTIEEEVSVYDPNGPEVEEVAN 303

Query: 303 XXXXXXXXXXXXXXXXXXXXXXXXXXRWKCSPTFQICRRR-------------------- 362
                                     +WKC P+F  C R+                    
Sbjct: 304 GPELVKEGEATVAPGPCKEESGYCFPQWKCLPSFPTCGRKLSVVEEEVTVDDPNVPEVAN 363

Query: 363 ---------------------------------------KVVAGKEEVVGGAP---KVEE 422
                                                  KV AGK+E+    P   +VEE
Sbjct: 364 RPDLAKEGEATVAPDPRKEGSGCCSPRLKDVSEFQIRNSKVAAGKQEMTVDVPNVLEVEE 423

Query: 423 VGNDNVTKQ-----EEDSVGCLQAFHICGG------------------------------ 482
           V ND V KQ     E+  V  L  F IC                                
Sbjct: 424 VANDVVNKQDDICPEKQEVIGLPGFQICSSKVAAGKQEMTIDVPNVPEVEEVANDVVKKQ 483

Query: 483 RKRVDDNPKTSEKEPLVSNDSS--------NLDVQNLQKEESGCCSCFRCIPTFQICGGR 542
           +K VD +P T E     S+ S+        N  V  L K  SG C  F+ +P+F ICG  
Sbjct: 484 KKEVDGDPNTGEAVASCSSSSNLHEEEEKINASVPELHKNGSG-CGWFKWMPSFLICG-- 543

Query: 543 RSNEDSGVPKPGREEKVIVDVSDPPE-----------MGSVVDGRERHSRPVQGGTCW-- 602
            S   S VP P REEKV+   SD  E                          + G+CW  
Sbjct: 544 -SKVVSDVPNPSREEKVVAGDSDIQEGXXXXXXXXXXXXXXXXXXXXXXXXARQGSCWPF 603

Query: 603 ---SGWFPRFLLCGEGTAVDAPNHREEEEKAPSDARKEEKVVVATAVGDE---------I 615
              + W+P  LLC  G  V+A NH+EEE++ P    KE+ V V T   +E         +
Sbjct: 604 QCCTIWWPSKLLCTGGMDVNASNHQEEEQEEPLSDNKEKVVDVLTVKHNEKGAAMGVPDL 663

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BLAST of CsaV3_3G018460 vs. NCBI nr
Match: XP_022985119.1 (uncharacterized protein LOC111483201 [Cucurbita maxima])

HSP 1 Score: 181.0 bits (458), Expect = 1.3e-41
Identity = 189/499 (37.88%), Postives = 238/499 (47.70%), Query Frame = 0


Query: 1   MATNKPKEEQRSRKPRHRRNQQMEEFPTFTKWLTTFGHSGSCNDAKSKSKQLNPANRPLQ 60
           MAT+K KE+ + RK  HRRN Q+EEFPTFTKWL   G S S +D  SKS +      P++
Sbjct: 1   MATDKQKEDGKPRKKCHRRNLQIEEFPTFTKWLGPRGRSSSHDDTSSKSYKRGVPYPPIR 60

Query: 61  RPPVVLPASSEDAVPVVTNVPEEEGVQTMAVDGSISARGGAGCCCWQSSKSTRRECALKF 120
           R P    +S      V  +VP+E+GV   A+  SISARG  GCCCWQ SKST+REC L F
Sbjct: 61  RIP--RDSSRGGGGVVACDVPKEDGV---AIGESISARG--GCCCWQRSKSTQRECGLNF 120

Query: 121 HISLRKRKVVANSTEAEVVAAVLNPPEEATVED----VKDGCGCRCLRTFKIFRRRK--- 180
           H SLRK KVV N +E +V A V +  EE  VE      ++GC CRC  TF I  RRK   
Sbjct: 121 HFSLRKSKVVTNVSE-DVAAGVSDVREEQVVEAGAVINREGCRCRCSPTFLICGRRKVSP 180

Query: 181 -----------------------SRVVGVSDLQKEEGAVTDGVNLRTEEXXXXXXXXXXX 240
                                  S VV   +L KEEG  TDG  +  + XXXXXXXXXXX
Sbjct: 181 TGVPYFPEKRSGRRNSRSTRRRCSPVVDAPNLHKEEGPATDGPGV-LKXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXRWKCSPTFQICRRRKVVAGKEEVV--------GGAPKVEE 300
           XXXXXXXXXXXXXXX     +WKC P+F +C R+  V  +E  +           P+VEE
Sbjct: 241 XXXXXXXXXXXXXXXGSCCSQWKCLPSFPMCGRKLSVVEEEATIEEEVSVDDPNGPEVEE 300

Query: 301 VGNDNVTKQEEDSVGCLQAF---------------------HICGGRKR--VDDNPKTSE 360
           V N     +E                                +  G +   V D P   E
Sbjct: 301 VANGPELVKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXERKVATGEEELTVVDIPNLLE 360

Query: 361 KE----PLVSNDSSNLDVQNLQKEESGCCSCFRCIPTFQICGGRRSNEDSGVPKPGREEK 415
            E    P +  +    D     K+   CCS ++C+PTF +CG + +         G+EE 
Sbjct: 361 VEVANGPELVKEGEATDAPAPCKKSGSCCSQWKCLPTFPMCGRKVAT--------GKEEL 420

[Close]

BLAST of CsaV3_3G018460 vs. NCBI nr
Match: XP_022922694.1 (uncharacterized protein LOC111430613 isoform X3 [Cucurbita moschata])

HSP 1 Score: 177.6 bits (449), Expect = 1.4e-40
Identity = 219/661 (33.13%), Postives = 301/661 (45.54%), Query Frame = 0


Query: 3   TNKPKEEQRSRKPRHRRNQQMEEFPTFTKWLTTFGHSGSCNDAKSKSKQLNPANRPLQRP 62
           T+K KE+ + +K  HRRN Q+EEFPTFTKWL   G S S +D  SKS +      P++R 
Sbjct: 4   TDKQKEDGKPKKKCHRRNLQIEEFPTFTKWLGPRGRSSSRDDTSSKSYKRGVPYPPVRRI 63

Query: 63  PVVLPASSEDAVPVVTNVPEEEGVQTMAVDGSISARGGAGCCCWQSSKSTRRECALKFHI 122
           P    +S      V  +V +E+G   +A+  SISARG  GCCCWQ SKST+REC L FH 
Sbjct: 64  P--RDSSXXXXXXVACDVSKEDG--GVAIGESISARG--GCCCWQRSKSTQRECGLNFHF 123

Query: 123 SLRKRKVVANSTEAEVVAAVLNPPEEATVED----VKDGCGCRCLRTFKIFRRRKSRVVG 182
           SLRK KVV N +E  V A V +  EE  VE      ++GCGCRC  TF I  RRK    G
Sbjct: 124 SLRKSKVVTNVSEG-VAAGVSDVREEQVVEAGAVINREGCGCRCSPTFHICGRRKVPPTG 183

Query: 183 VS--------------------------DLQKEEGAVTDGVNLRTEEXXXXXXXXXXXXX 242
           VS                          +L KEEG  TDG ++  + XXXXXXXXXXXXX
Sbjct: 184 VSYLPEKRSGRRKSRSIRRRGLPVVDAPNLHKEEGPATDGPDV-LKXXXXXXXXXXXXXX 243

Query: 243 XXXXXXXXXXXXXXXXXXRWKCSPTFQICRRRKVVAGKEEVV--------GGAPKVEEVG 302
           XXXXXXXXXXXXX     +WKC P+F +C R+  V  +E  +           P+VEEV 
Sbjct: 244 XXXXXXXXXXXXXRSCCSQWKCLPSFPMCGRKLSVVEEEVTIEEEVSVYDPNGPEVEEVA 303

Query: 303 NDNVTKQEEDS----VGCLQAFHICGGRKRVDDNP------KTSEKEPLVSNDSSNLDVQ 362
           N   + +E ++      C +    C   K     P       T E+E  V N  + LDV+
Sbjct: 304 NGPESVKEGEATIAPAPCKEGSESCSQWKCSPSIPMCERKVATGEEELTVVNVPNLLDVE 363

Query: 363 -----------------NLQKEESGCCSCFRCIPTFQICGGRRSNEDSGVPKPGREEKVI 422
                            +L K    CCS ++C+P F +CG + +          + E  +
Sbjct: 364 VANGPELVQEGEATDAPSLCKRSGSCCSQWKCLPAFPMCGRKVAT--------SKVELTV 423

Query: 423 VDVSDPPEMGSVVDGRERHSRPV----------QGGTCWSGW--FPRFLLCG-------E 482
           VD+ +  E+  V +G E     V          + G+C S W   P F  CG       E
Sbjct: 424 VDIPNLLEVEEVANGPELVKEGVATGSPGPYKKRSGSCCSQWKCLPSFPTCGRKLSVVEE 483

Query: 483 GTAVDAPN----------HREEEEKAPSDARKEEKVVVATAVGDEISDHDKEKPVAAIDI 542
              VD PN           +E E     D RKE     +  + D      +   VAA   
Sbjct: 484 EVTVDDPNVPEVANRPDLAKEGEATVAPDPRKEGSGCCSPRLKDVSEFQIRNSKVAA--- 543

Query: 543 PVVNEEEVFVGAGDTLDLHKEKNVSSCNIQDVRKEEIVDSDEKVEGGGCGCWGKESGSRQ 565
               ++E+ V   + L++ +  N    ++ + +K+E VD D         C    +   +
Sbjct: 544 ---GKQEMTVDVPNVLEVEEVAN----DVVNKQKKE-VDGDPNTGEAVASCSSSSNLHEE 603

[Close]

BLAST of CsaV3_3G018460 vs. NCBI nr
Match: XP_022922692.1 (uncharacterized protein LOC111430613 isoform X1 [Cucurbita moschata])

HSP 1 Score: 176.8 bits (447), Expect = 2.4e-40
Identity = 218/664 (32.83%), Postives = 298/664 (44.88%), Query Frame = 0


Query: 3   TNKPKEEQRSRKPRHRRNQQMEEFPTFTKWLTTFGHSGSCNDAKSKSKQLNPANRPLQRP 62
           T+K KE+ + +K  HRRN Q+EEFPTFTKWL   G S S +D  SKS +      P++R 
Sbjct: 4   TDKQKEDGKPKKKCHRRNLQIEEFPTFTKWLGPRGRSSSRDDTSSKSYKRGVPYPPVRRI 63

Query: 63  PVVLPASSEDAVPVVTNVPEEEGVQTMAVDGSISARGGAGCCCWQSSKSTRRECALKFHI 122
           P    +S      V  +V +E+G   +A+  SISARG  GCCCWQ SKST+REC L FH 
Sbjct: 64  P--RDSSXXXXXXVACDVSKEDG--GVAIGESISARG--GCCCWQRSKSTQRECGLNFHF 123

Query: 123 SLRKRKVVANSTEAEVVAAVLNPPEEATVED----VKDGCGCRCLRTFKIFRRRKSRVVG 182
           SLRK KVV N +E  V A V +  EE  VE      ++GCGCRC  TF I  RRK    G
Sbjct: 124 SLRKSKVVTNVSEG-VAAGVSDVREEQVVEAGAVINREGCGCRCSPTFHICGRRKVPPTG 183

Query: 183 VS--------------------------DLQKEEGAVTDGVNLRTEEXXXXXXXXXXXXX 242
           VS                          +L KEEG  TDG ++  + XXXXXXXXXXXXX
Sbjct: 184 VSYLPEKRSGRRKSRSIRRRGLPVVDAPNLHKEEGPATDGPDV-LKXXXXXXXXXXXXXX 243

Query: 243 XXXXXXXXXXXXXXXXXXRWKCSPTFQICRRRKVVAGKEEVV--------GGAPKVEEVG 302
           XXXXXXXXXXXXX     +WKC P+F +C R+  V  +E  +           P+VEEV 
Sbjct: 244 XXXXXXXXXXXXXRSCCSQWKCLPSFPMCGRKLSVVEEEVTIEEEVSVYDPNGPEVEEVA 303

Query: 303 NDNVTKQEEDS----VGCLQAFHICGGRKRVDDNP------KTSEKEPLVSNDSSNLDVQ 362
           N   + +E ++      C +    C   K     P       T E+E  V N  + LDV+
Sbjct: 304 NGPESVKEGEATIAPAPCKEGSESCSQWKCSPSIPMCERKVATGEEELTVVNVPNLLDVE 363

Query: 363 -----------------NLQKEESGCCSCFRCIPTFQICGGRRSNEDSGVPKPGREEKVI 422
                            +L K    CCS ++C+P F +CG + +          + E  +
Sbjct: 364 VANGPELVQEGEATDAPSLCKRSGSCCSQWKCLPAFPMCGRKVAT--------SKVELTV 423

Query: 423 VDVSDPPEMGSVVDGRERHSRPV----------QGGTCWSGW--FPRFLLCG-------E 482
           VD+ +  E+  V +G E     V          + G+C S W   P F  CG       E
Sbjct: 424 VDIPNLLEVEEVANGPELVKEGVATGSPGPYKKRSGSCCSQWKCLPSFPTCGRKLSVVEE 483

Query: 483 GTAVDAPNHREEEEKAPSDARKEEKVVVATAVGDEISDHDKEKPVAAIDIPVVNEEEVFV 542
              VD PN  E   +   D  KE +  VA     E S     +     +  + N +   V
Sbjct: 484 EVTVDDPNVPEVANR--PDLAKEGEATVAPDPRKEGSGCCSPRLKDVSEFQIRNSK---V 543

Query: 543 GAGDTLDLHKEKNVSSCNIQDVRKEEIVDSDEKVEGGGCGCWGKESGSRQQHRSSRSMEG 583
            AG      +E  V   N+ +V  EE+ +     +   C                + + G
Sbjct: 544 AAG-----KQEMTVDVPNVLEV--EEVANDVVNKQDDIC-------------PEKQEVIG 603

[Close]

BLAST of CsaV3_3G018460 vs. TrEMBL
Match: tr|A0A0A0L996|A0A0A0L996_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G204780 PE=4 SV=1)

HSP 1 Score: 1187.2 bits (3070), Expect = 0.0e+00
Identity = 640/640 (100.00%), Postives = 640/640 (100.00%), Query Frame = 0


Query: 1   MATNKPKEEQRSRKPRHRRNQQMEEFPTFTKWLTTFGHSGSCNDAKSKSKQLNPANRPLQ 60
           MATNKPKEEQRSRKPRHRRNQQMEEFPTFTKWLTTFGHSGSCNDAKSKSKQLNPANRPLQ
Sbjct: 1   MATNKPKEEQRSRKPRHRRNQQMEEFPTFTKWLTTFGHSGSCNDAKSKSKQLNPANRPLQ 60

Query: 61  RPPVVLPASSEDAVPVVTNVPEEEGVQTMAVDGSISARGGAGCCCWQSSKSTRRECALKF 120
           RPPVVLPASSEDAVPVVTNVPEEEGVQTMAVDGSISARGGAGCCCWQSSKSTRRECALKF
Sbjct: 61  RPPVVLPASSEDAVPVVTNVPEEEGVQTMAVDGSISARGGAGCCCWQSSKSTRRECALKF 120

Query: 121 HISLRKRKVVANSTEAEVVAAVLNPPEEATVEDVKDGCGCRCLRTFKIFRRRKSRVVGVS 180
           HISLRKRKVVANSTEAEVVAAVLNPPEEATVEDVKDGCGCRCLRTFKIFRRRKSRVVGVS
Sbjct: 121 HISLRKRKVVANSTEAEVVAAVLNPPEEATVEDVKDGCGCRCLRTFKIFRRRKSRVVGVS 180

Query: 181 DLQKEEGAVTDGVNLRTEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWKCSPTFQI 240
           DLQKEEGAVTDGVNLRTEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWKCSPTFQI
Sbjct: 181 DLQKEEGAVTDGVNLRTEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWKCSPTFQI 240

Query: 241 CRRRKVVAGKEEVVGGAPKVEEVGNDNVTKQEEDSVGCLQAFHICGGRKRVDDNPKTSEK 300
           CRRRKVVAGKEEVVGGAPKVEEVGNDNVTKQEEDSVGCLQAFHICGGRKRVDDNPKTSEK
Sbjct: 241 CRRRKVVAGKEEVVGGAPKVEEVGNDNVTKQEEDSVGCLQAFHICGGRKRVDDNPKTSEK 300

Query: 301 EPLVSNDSSNLDVQNLQKEESGCCSCFRCIPTFQICGGRRSNEDSGVPKPGREEKVIVDV 360
           EPLVSNDSSNLDVQNLQKEESGCCSCFRCIPTFQICGGRRSNEDSGVPKPGREEKVIVDV
Sbjct: 301 EPLVSNDSSNLDVQNLQKEESGCCSCFRCIPTFQICGGRRSNEDSGVPKPGREEKVIVDV 360

Query: 361 SDPPEMGSVVDGRERHSRPVQGGTCWSGWFPRFLLCGEGTAVDAPNHREEEEKAPSDARK 420
           SDPPEMGSVVDGRERHSRPVQGGTCWSGWFPRFLLCGEGTAVDAPNHREEEEKAPSDARK
Sbjct: 361 SDPPEMGSVVDGRERHSRPVQGGTCWSGWFPRFLLCGEGTAVDAPNHREEEEKAPSDARK 420

Query: 421 EEKVVVATAVGDEISDHDKEKPVAAIDIPVVNEEEVFVGAGDTLDLHKEKNVSSCNIQDV 480
           EEKVVVATAVGDEISDHDKEKPVAAIDIPVVNEEEVFVGAGDTLDLHKEKNVSSCNIQDV
Sbjct: 421 EEKVVVATAVGDEISDHDKEKPVAAIDIPVVNEEEVFVGAGDTLDLHKEKNVSSCNIQDV 480

Query: 481 RKEEIVDSDEKVEGGGCGCWGKESGSRQQHRSSRSMEGCWSFQICGRGCLPTLNICRGRK 540
           RKEEIVDSDEKVEGGGCGCWGKESGSRQQHRSSRSMEGCWSFQICGRGCLPTLNICRGRK
Sbjct: 481 RKEEIVDSDEKVEGGGCGCWGKESGSRQQHRSSRSMEGCWSFQICGRGCLPTLNICRGRK 540

Query: 541 DVSVRISKLVEEGLVDNDVSDVHKEVVDATGVTDVVAGSDNSKCRRGCGCWNLKSRRRRA 600
           DVSVRISKLVEEGLVDNDVSDVHKEVVDATGVTDVVAGSDNSKCRRGCGCWNLKSRRRRA
Sbjct: 541 DVSVRISKLVEEGLVDNDVSDVHKEVVDATGVTDVVAGSDNSKCRRGCGCWNLKSRRRRA 600

Query: 601 VAVDKEGGSGRRSKFKGRKGXXXXXXXXXXXXXEGKEKNR 641
           VAVDKEGGSGRRSKFKGRKGXXXXXXXXXXXXXEGKEKNR
Sbjct: 601 VAVDKEGGSGRRSKFKGRKGXXXXXXXXXXXXXEGKEKNR 640

The following BLAST results are available for this feature:

BLAST of CsaV3_3G018460 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57524.1	0.0e+00	100.00	hypothetical protein Csa_3G204780 [Cucumis sativus]	[more]
XP_022922695.1	1.1e-45	27.68	uncharacterized protein LOC111430613 isoform X4 [Cucurbita moschata]	[more]
XP_022985119.1	1.3e-41	37.88	uncharacterized protein LOC111483201 [Cucurbita maxima]	[more]
XP_022922694.1	1.4e-40	33.13	uncharacterized protein LOC111430613 isoform X3 [Cucurbita moschata]	[more]
XP_022922692.1	2.4e-40	32.83	uncharacterized protein LOC111430613 isoform X1 [Cucurbita moschata]	[more]

BLAST of CsaV3_3G018460 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G018460 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G018460 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L996\|A0A0A0L996_CUCSA	0.0e+00	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G204780 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G018460.1	CsaV3_3G018460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 602..640

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G018460	CSPI03G18380	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G018460	CmaCh16G003520	Cucurbita maxima (Rimu)	cmacucB0373
CsaV3_3G018460	CmoCh16G003770	Cucurbita moschata (Rifu)	cmocucB0370
CsaV3_3G018460	Cla013076	Watermelon (97103) v1	cucwmB252
CsaV3_3G018460	MELO3C019519	Melon (DHL92) v3.5.1	cucmeB247
CsaV3_3G018460	ClCG05G010080	Watermelon (Charleston Gray)	cucwcgB238
CsaV3_3G018460	Lsi05G002170	Bottle gourd (USVL1VR-Ls)	cuclsiB230
CsaV3_3G018460	MELO3C019519.2	Melon (DHL92) v3.6.1	cucmedB246
CsaV3_3G018460	Cla97C05G092480	Watermelon (97103) v2	cucwmbB217
CsaV3_3G018460	Bhi01G001263	Wax gourd	cucwgoB287

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G018460	Melon (DHL92) v3.6.1	cucmedB181
CsaV3_3G018460	Melon (DHL92) v3.6.1	cucmedB260
CsaV3_3G018460	Watermelon (Charleston Gray)	cucwcgB214
CsaV3_3G018460	Watermelon (Charleston Gray)	cucwcgB218
CsaV3_3G018460	Watermelon (97103) v1	cucwmB279
CsaV3_3G018460	Watermelon (97103) v2	cucwmbB201
CsaV3_3G018460	Wax gourd	cucwgoB313
CsaV3_3G018460	Cucumber (Chinese Long) v3	cuccucB153
CsaV3_3G018460	Cucumber (Chinese Long) v3	cuccucB156
CsaV3_3G018460	Silver-seed gourd	carcucB0236
CsaV3_3G018460	Silver-seed gourd	carcucB0403
CsaV3_3G018460	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G018460	Cucumber (Gy14) v2	cgybcucB282
CsaV3_3G018460	Cucumber (Gy14) v2	cgybcucB329
CsaV3_3G018460	Cucumber (Gy14) v1	cgycucB123
CsaV3_3G018460	Cucumber (Gy14) v1	cgycucB338
CsaV3_3G018460	Cucumber (Gy14) v1	cgycucB369
CsaV3_3G018460	Cucurbita maxima (Rimu)	cmacucB0145
CsaV3_3G018460	Cucurbita maxima (Rimu)	cmacucB0618
CsaV3_3G018460	Cucurbita maxima (Rimu)	cmacucB0829
CsaV3_3G018460	Cucurbita moschata (Rifu)	cmocucB0133
CsaV3_3G018460	Cucurbita moschata (Rifu)	cmocucB0602
CsaV3_3G018460	Cucurbita moschata (Rifu)	cmocucB0814
CsaV3_3G018460	Cucurbita pepo (Zucchini)	cpecucB0247
CsaV3_3G018460	Cucurbita pepo (Zucchini)	cpecucB0302
CsaV3_3G018460	Cucurbita pepo (Zucchini)	cpecucB0484
CsaV3_3G018460	Wild cucumber (PI 183967)	cpicucB347
CsaV3_3G018460	Wild cucumber (PI 183967)	cpicucB396
CsaV3_3G018460	Bottle gourd (USVL1VR-Ls)	cuclsiB184
CsaV3_3G018460	Bottle gourd (USVL1VR-Ls)	cuclsiB205
CsaV3_3G018460	Melon (DHL92) v3.5.1	cucmeB189
CsaV3_3G018460	Melon (DHL92) v3.5.1	cucmeB265