CsaV3_3G017930 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G017930
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 13604311 .. 13604556 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGATCTCACGTCAGTACGCTATGCATCGGCGTTTGTCTTTCGTCGACATGGCCTTTTATCAACGCCAACAAAAGTTATCCCGATGCATTTTTGCATACGTTCACGCCGACGTTCGGATGTGTGTCGACAAAGCCTTTGCTGACACTAGTATGACCTTTAGCCGACGCCATTGTGCGTCGTCGAAAGTCTTGTTTCTTGTAATGTACTTCCATTTCCTCAAAATTCATTCATTGTATTCATGA

mRNA sequence

ATGTCGATCTCACGTCAGTACGCTATGCATCGGCGTTTGTCTTTCGTCGACATGGCCTTTTATCAACGCCAACAAAAGTTATCCCGATGCATTTTTGCATACGTTCACGCCGACGTTCGGATGTGTGTCGACAAAGCCTTTGCTGACACTAGTATGACCTTTAGCCGACGCCATTGTGCGTCGTCGAAAGTCTTGTTTCTTGTAATGTACTTCCATTTCCTCAAAATTCATTCATTGTATTCATGA

Coding sequence (CDS)

ATGTCGATCTCACGTCAGTACGCTATGCATCGGCGTTTGTCTTTCGTCGACATGGCCTTTTATCAACGCCAACAAAAGTTATCCCGATGCATTTTTGCATACGTTCACGCCGACGTTCGGATGTGTGTCGACAAAGCCTTTGCTGACACTAGTATGACCTTTAGCCGACGCCATTGTGCGTCGTCGAAAGTCTTGTTTCTTGTAATGTACTTCCATTTCCTCAAAATTCATTCATTGTATTCATGA

Protein sequence

MSISRQYAMHRRLSFVDMAFYQRQQKLSRCIFAYVHADVRMCVDKAFADTSMTFSRRHCASSKVLFLVMYFHFLKIHSLYS
BLAST of CsaV3_3G017930 vs. NCBI nr
Match: KGN57469.1 (hypothetical protein Csa_3G190880 [Cucumis sativus])

HSP 1 Score: 162.2 bits (409), Expect = 7.7e-37
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0

Query: 1  MSISRQYAMHRRLSFVDMAFYQRQQKLSRCIFAYVHADVRMCVDKAFADTSMTFSRRHCA 60
          MSISRQYAMHRRLSFVDMAFYQRQQKLSRCIFAYVHADVRMCVDKAFADTSMTFSRRHCA
Sbjct: 1  MSISRQYAMHRRLSFVDMAFYQRQQKLSRCIFAYVHADVRMCVDKAFADTSMTFSRRHCA 60

Query: 61 SSKVLFLVMYFHFLKIHSLYS 82
          SSKVLFLVMYFHFLKIHSLYS
Sbjct: 61 SSKVLFLVMYFHFLKIHSLYS 81

BLAST of CsaV3_3G017930 vs. TrEMBL
Match: tr|A0A0A0L918|A0A0A0L918_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G190880 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.1e-37
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0

Query: 1  MSISRQYAMHRRLSFVDMAFYQRQQKLSRCIFAYVHADVRMCVDKAFADTSMTFSRRHCA 60
          MSISRQYAMHRRLSFVDMAFYQRQQKLSRCIFAYVHADVRMCVDKAFADTSMTFSRRHCA
Sbjct: 1  MSISRQYAMHRRLSFVDMAFYQRQQKLSRCIFAYVHADVRMCVDKAFADTSMTFSRRHCA 60

Query: 61 SSKVLFLVMYFHFLKIHSLYS 82
          SSKVLFLVMYFHFLKIHSLYS
Sbjct: 61 SSKVLFLVMYFHFLKIHSLYS 81

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN57469.17.7e-37100.00hypothetical protein Csa_3G190880 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L918|A0A0A0L918_CUCSA5.1e-37100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G190880 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G017930.1CsaV3_3G017930.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None