CsaV3_3G017910 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G017910
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 13571172 .. 13571454 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATGAGATCAGAGGGGGAGGATGTCAAAATCAAAAGCACTGAACTCAAATACACAAGAATTCAATGGCTTCAGAAGTTCAGGTAAGCCGGTCATGTCAGGTTTATGAAACAAAAGATAAAGAAATTAAACTTCTGAACAACAAACTTTCACTCGAAAACTTCTATTGAAAGTTATTTGAATGTGCAGTCCTTTCTTTTCTATCTTAGGCAACATAACATTCACGAAGACCAATGAAATTTCAGAGGAGGCAGCAAGAGAAAATAGCACAATAGTCTAG

mRNA sequence

ATGGCAATGAGATCAGAGGGGGAGGATGTCAAAATCAAAAGCACTGAACTCAAATACACAAGAATTCAATGGCTTCAGAAGTTCAGTCCTTTCTTTTCTATCTTAGGCAACATAACATTCACGAAGACCAATGAAATTTCAGAGGAGGCAGCAAGAGAAAATAGCACAATAGTCTAG

Coding sequence (CDS)

ATGGCAATGAGATCAGAGGGGGAGGATGTCAAAATCAAAAGCACTGAACTCAAATACACAAGAATTCAATGGCTTCAGAAGTTCAGTCCTTTCTTTTCTATCTTAGGCAACATAACATTCACGAAGACCAATGAAATTTCAGAGGAGGCAGCAAGAGAAAATAGCACAATAGTCTAG

Protein sequence

MAMRSEGEDVKIKSTELKYTRIQWLQKFSPFFSILGNITFTKTNEISEEAARENSTIV
BLAST of CsaV3_3G017910 vs. NCBI nr
Match: KGN57467.1 (hypothetical protein Csa_3G190370 [Cucumis sativus])

HSP 1 Score: 116.7 bits (291), Expect = 2.7e-23
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0

Query: 1  MAMRSEGEDVKIKSTELKYTRIQWLQKFSPFFSILGNITFTKTNEISEEAARENSTIV 59
          MAMRSEGEDVKIKSTELKYTRIQWLQKFSPFFSILGNITFTKTNEISEEAARENSTIV
Sbjct: 1  MAMRSEGEDVKIKSTELKYTRIQWLQKFSPFFSILGNITFTKTNEISEEAARENSTIV 58

BLAST of CsaV3_3G017910 vs. TrEMBL
Match: tr|A0A0A0LA31|A0A0A0LA31_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G190370 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.8e-23
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0

Query: 1  MAMRSEGEDVKIKSTELKYTRIQWLQKFSPFFSILGNITFTKTNEISEEAARENSTIV 59
          MAMRSEGEDVKIKSTELKYTRIQWLQKFSPFFSILGNITFTKTNEISEEAARENSTIV
Sbjct: 1  MAMRSEGEDVKIKSTELKYTRIQWLQKFSPFFSILGNITFTKTNEISEEAARENSTIV 58

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN57467.12.7e-23100.00hypothetical protein Csa_3G190370 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LA31|A0A0A0LA31_CUCSA1.8e-23100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G190370 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G017910.1CsaV3_3G017910.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None