CsaV3_3G017800 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G017800
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPentatricopeptide repeat-containing protein
Locationchr3 : 13372028 .. 13376552 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAGAACTATATGGCGCGCAGTGGATTTTTTTTAATTACAGGAATACCCTCCTTCAATTTCTACTTCCTCTCATCGGCGAGCCTTAGCCTCTCTCCTAAAAACACCTCTCATCGACAAAGACGACGTTAAGGACTGCGCCGCTCCCGTCGCCGCCGCAACAACCGCCGCGCTTGTCAACATCTCTCATATGACGTCGTTTTCCGCTTTACCTCGACACAGCTTCGCCTCGACCTCAGCGTTGTCATCGGTACGCCTCTTTCTCGCCGATCTCACCTTTGCTGCCTCGCCGCCGTGGCTTCCGTCTTCAGCGTCCGGGTTCTAATCTTCGAGTGCAAGTCGTCTAATCTGATAGAAGAGTGTTTTTTCTATTTCCAGTTTTTGTATGTTGAACTCGGTAAAGGAAACCATTGGTGTCTTATCTTTCATTTTTTATTTAAAAGTACAATTTCTATGAAGATTTTGTTGGGTGAATGTAAGTGTTGGACTTGGAATTCAGTGGATATTTAAACTAGTGTGCTAAAACATGTTTATATATGTGTTACAGATTGCTGAAGCTCATGGCCCCGTCAAGAAAGTCCAGAAGTGTTAATAAGGGTTTTCTTCTGCTAATGAGGTATCCTCAAGCAAACACGTGGAAGATGCCAGCAAAAGCAAGCAGAAGGTATGTGTGTTTGTGGTGGAAGATGGCTTTTCCAAGATTTGTTCAGTCTGTCGACTTTCCATTTGCTTCAATATGAAAAATATTATATTTCGTCGTTTTAATTTAGAATTTGGGTTACTATTTTCATCGTGTTACAGGCTATCTTGAAGTAAATTGGGCATTGCTATTCTATCTATTATCATTGTTTTTGACCCGTTAAAAGCTAGACACTCCAACTTGTAATCAGCCGCTTTCTATGGTTTGGAGGGAAATCCAGCTGTGGGTTTGTGAAGGTAAGAGATATGTGAATTTGTTGAAATCCAACCACCTTTCTTATGGGCGTATATCATCTCTCATTCATAAACCCACCTTCAAACCCACCATTAATCTTTCAATTTTGGAGTTTCATTTGAACCGATGTCAACATATCAATCAATTCAACCAAATACTCTCTCAGATGCTTCTAACTGGCTTCATAAGAGAAACTTATGCTGCAAGCAGATTAATCAAATTCTCAACACATTTTCCCTTCATTCACATCGATTACACCCGTCGAATTTTCAACTTCATTGAGAACACCAATTGCTTTATGTGGAATATGATGATTAGAGCTTACATTCAAACAAACTCCCCTCATTTTGCTTTCACTCTTTACAAATCCATGCTTTCTAACTATTTGGGTGCTGATAATTACACCTACCCACTTCTGATTCAGGCTTGTTCCATCCGTCGGTCGGAATGGGAAGCAAAGCAGGTGCATAATCATGTTTTGAAATTGGGTTTTGATTCAGATGTTTATGTTCGAAATACTTTGATTAATTGTTTTTCTGTTTGCTCCAATATGACTGATGCTTGCCGGGTGTTTAATGAAAGTTCTGTTTTGGATTCTGTGTCATGGAATTCAATTTTGGCTGGGTATATTGAAATAGGTAATGTAGAGGAGGCAAAGCATATATATCATCAAATGCCAGAGAGGAGCATAATTGCTTCAAATTCTATGATTGTTTTGTTTGGCATGAGAGGACTAGTGGTTGAAGCCTGTAAGTTGTTTGATGAAATGCTAGAGAAAGATATGGTTACATGGAGTGCATTAATTGCTTGCTTTCAGCAGAACGAGATGTATGAGGAGGCTATAAGAACATTTGTAGGAATGCATAAAATTGGAGTAATGGTGGATGAAGTTGTAGCGGTGAGTGCTCTTTCTGCTTGTGCAAACTTACTGGTTGTTAATATGGGGAAATTGATTCACAGCTTATCTTTGAAAATTGGAACTGAATCTTACATAAACCTTCAGAATGCTTTGATTTATATGTACTCGAAATGTGGGGATATAATGGTGGCACGTAAATTGTTTGATGAAGCCTATTTGTTAGACTTGATATCTTGGAACTCTATGATATCAGGATATTTGAAATGCAATTTAGTTGATAATGCCAAAGCCATTTTTGATTCCATGCCTGAGAAGGATGTTGTGTCTTGGAGTTCTATGATATCAGGTTATGCACAAAATGACCTTTTTGATGAGACTCTGGCGCTTTTCCAGGAAATGCAAATGAGTGGCTTCAAACCAGACGAGACCACATTAGTGAGTGTGATATCTGCATGCGCTCGCTTGGCTGCCCTTGAGCAAGGGAAGTGGGTCCATGCGTATATAAAAAGGAACGGTCTGACCATTAATGTTATTCTAGGTACTACCCTCATAGACATGTATATGAAGTGTGGATGTGTTGAAACTGCCTTGGAGGTTTTTTATGGGATGATTGAGAAAGGGATTTCGACTTGGAATGCTCTAATTCTTGGGTTGGCAATGAATGGGTTAGTGGAAAGCTCGCTTGATATGTTTTCTAATATGAAAAAGTGTCATGTAACACCTAATGAAATAACATTCATGGGAGTACTTGGTGCTTGTCGTCACATGGGTTTAGTAGATGAAGGGCAGCATCATTTTTATTCAATGATTCACGATCATAAGATACAGCCAAATGTTAAGCACTATGGGTGCATGGTTGATCTTCTAGGACGTGCAGGTAAGCTTCAAGAAGCAGAGGAACTTCTCAACCGTATGCCTATGACACCAGATGTTGCTACTTGGGGTGCCTTACTTGGGGCTTGTAAGAAACACGGTGATAGTGAAATGGGAAGAAGGGTTGGGAGGAAGCTGATTGAGCTTCAGCCTGACCATGATGGTTTCCACGTGTTGTTATCGAACATATATGCTTCAAAAGGAAAATGGGATGATGTTCTTGAGATTAGGGGCATGATGACAAAACATAGGGTTTTGAAGATTCCTGGTTGTAGCATGATTGAAGCAAATGGAGTTATTCATGAATTTCTAGCTGGTGATAAAACACACCCCGACATGGATGCAATTGAGGATATGTTGGTTGAAATGGCTATGAAATTGAAGTTAGAAGGTTATACACCAGACATAAATGAGGTTTTGCTTGATGTTGATGAAGAAGAGAAGGAAAGTACTCTGTTTAGACATAGTGAGAAGCTAGCCATTGCATTTGGTCTTATTAATATTAGTCCACCAACACCTATCCGGATAATGAAAAACTTGAGGATATGTAATGACTGTCACACTGCTGCAAAATTAATCTCCAAGGCTTTTTGTCGGAAAATTGTGGTGAGAGACCGACATCGGTTTCATCACTTTGAGCAGGGGTTTTGTTCATGTAAGGATTACTGGTAGTGGATAAGGATTCATAATACTTGACAACTTGATTTTTAGGGCTTGTAAACTTGATTTTTAGAGCTTATTTTGGCACCATTTCGCTTGATCATCTTCACTAGGACTGGCAACTAAGTTGCCTCGAGGTCTCGCAAGCAGCAACTCACAAAGCTAGTTTCTCTTCATTCGGGATGTTGCCGCAAAATGGCTTGGTGAACATTTTTCCAGTGATGGTGATGAGTTTGCTACACTTGCGAGTTCCTATTTAGAGGTCAGGCAATTACGGTGTGCCTTAAACTCTACCATGGATGGGCGTGGGTCAAAAGCTGCAGCTTAATTGTTGACATAATTGGCAAGAATCAGTTGATACTGGTTGCCTCTAGGTACGGATGCATCTAGAGACATAATGGGAAGTTCTAGTCTTTAAAAAACATCTTCCTAGGGTGTAATTCGTTTTGTTCTTTAAAATGCTTTTATACTAAGTTCTTAGTTCAAACCAATTCTTTACTAGAATTTGTTCTTGCATTTCAAAGTTGAGTGGCGATGGATGGGATCGATATGGTACACATGCTTGAATTGTAATAAAAACTTGACCTTTTGTTCTAATGTTACATAGTGACAATACATTATTATTATTTATTGTAATAGTTTATAAATACCACAACTAAATAAATTTAAATAAATTGATCTTGATTTGCATTATTATTGGATTTCAGATTTAAATATGATGAATCTCTTCTTCCTGGAATTCAAATCTGCCTTCAGGGCCACAAGAGCAACTTTGGTTGGGTTTTTCCGATCTTTGTATCTTGGAATATATATTTTCTGAATCAGGTCAAATACAACTGATCAACACGTTAACCGAAAGAAACATATGCTTTGAAGAGGATGGATCTCGACAATGTATTCATCGTATGCTCAAGAACATAGTCGTGAGAACTATGTGTTTATTAGAATTAAAATCCTACCTATGCTTTAGATAATAGAGCACTATAACCTTTTTTGTGCAAGAGCAATTATTTATAAGAATGGTGCAGTGACACTTCTATTTTAAGAGTGATTTATATTTAGCCATAGTATTCTTTTGACTATTTGTTTTCATTGAAAGGGATGAAAGTTATTCACCAACTTTTCAATATTTTTTCAACAATTCGAGCACACGTCGCTCAAAAATTTGCAATTATAAGTTAATTCAAGCTTTCGATTTTGC

mRNA sequence

ATGGTTTGGAGGGAAATCCAGCTGTGGGTTTGTGAAGGCTTGTTCCATCCGTCGGTCGGAATGGGAAGCAAAGCAGGTAATGTAGAGGAGGCAAAGCATATATATCATCAAATGCCAGAGAGGAGCATAATTGCTTCAAATTCTATGATTGTTTTGTTTGGCATGAGAGGACTAGTGGTTGAAGCCTGTAAGTTGTTTGATGAAATGCTAGAGAAAGATATGGTTACATGGAGTGCATTAATTGCTTGCTTTCAGCAGAACGAGATGTATGAGGAGGCTATAAGAACATTTGTAGGAATGCATAAAATTGGAGTAATGGTGGATGAAGTTGTAGCGGAAATGCAAATGAGTGGCTTCAAACCAGACGAGACCACATTAGTGAGTGTGATATCTGCATGCGCTCGCTTGGCTGCCCTTGAGCAAGGGAAGTGGGTCCATGCGTATATAAAAAGGAACGGTCTGACCATTAATGTTATTCTAGGTACTACCCTCATAGACATGTATATGAAGTGTGGATGTGTTGAAACTGCCTTGGAGGTTTTTTATGGGATGATTGAGAAAGGGATTTCGACTTGGAATGCTCTAATTCTTGGGTTGGCAATGAATGGGTTAGTGGAAAGCTCGCTTGATATGTTTTCTAATATGAAAAAGTGTCATGTAACACCTAATGAAATAACATTCATGGGAGTACTTGGTGCTTGTCGTCACATGGGTTTAGTAGATGAAGGGCAGCATCATTTTTATTCAATGATTCACGATCATAAGATACAGCCAAATGTTAAGCACTATGGGTGCATGGTTGATCTTCTAGGACGTGCAGGTAAGCTTCAAGAAGCAGAGGAACTTCTCAACCGTATGCCTATGACACCAGATGTTGCTACTTGGGGTGCCTTACTTGGGGCTTGTAAGAAACACGGTGATAGTGAAATGGGAAGAAGGGTTGGGAGGAAGCTGATTGAGCTTCAGCCTGACCATGATGGTTTCCACGTGTTGTTATCGAACATATATGCTTCAAAAGGAAAATGGGATGATGTTCTTGAGATTAGGGGCATGATGACAAAACATAGGGTTTTGAAGATTCCTGGTTGTAGCATGATTGAAGCAAATGGAGTTATTCATGAATTTCTAGCTGGTGATAAAACACACCCCGACATGGATGCAATTGAGGATATGTTGGTTGAAATGGCTATGAAATTGAAGTTAGAAGGTTATACACCAGACATAAATGAGGTTTTGCTTGATGTTGATGAAGAAGAGAAGGAAAGTACTCTGTTTAGACATAGTGAGAAGCTAGCCATTGCATTTGGTCTTATTAATATTAGTCCACCAACACCTATCCGGATAATGAAAAACTTGAGGATATGTAATGACTGTCACACTGCTGCAAAATTAATCTCCAAGGCTTTTTGTCGGAAAATTGTGGTGAGAGACCGACATCGGTTTCATCACTTTGAGCAGGGGTTTTGTTCATGTAAGGATTACTGGTAG

Coding sequence (CDS)

ATGGTTTGGAGGGAAATCCAGCTGTGGGTTTGTGAAGGCTTGTTCCATCCGTCGGTCGGAATGGGAAGCAAAGCAGGTAATGTAGAGGAGGCAAAGCATATATATCATCAAATGCCAGAGAGGAGCATAATTGCTTCAAATTCTATGATTGTTTTGTTTGGCATGAGAGGACTAGTGGTTGAAGCCTGTAAGTTGTTTGATGAAATGCTAGAGAAAGATATGGTTACATGGAGTGCATTAATTGCTTGCTTTCAGCAGAACGAGATGTATGAGGAGGCTATAAGAACATTTGTAGGAATGCATAAAATTGGAGTAATGGTGGATGAAGTTGTAGCGGAAATGCAAATGAGTGGCTTCAAACCAGACGAGACCACATTAGTGAGTGTGATATCTGCATGCGCTCGCTTGGCTGCCCTTGAGCAAGGGAAGTGGGTCCATGCGTATATAAAAAGGAACGGTCTGACCATTAATGTTATTCTAGGTACTACCCTCATAGACATGTATATGAAGTGTGGATGTGTTGAAACTGCCTTGGAGGTTTTTTATGGGATGATTGAGAAAGGGATTTCGACTTGGAATGCTCTAATTCTTGGGTTGGCAATGAATGGGTTAGTGGAAAGCTCGCTTGATATGTTTTCTAATATGAAAAAGTGTCATGTAACACCTAATGAAATAACATTCATGGGAGTACTTGGTGCTTGTCGTCACATGGGTTTAGTAGATGAAGGGCAGCATCATTTTTATTCAATGATTCACGATCATAAGATACAGCCAAATGTTAAGCACTATGGGTGCATGGTTGATCTTCTAGGACGTGCAGGTAAGCTTCAAGAAGCAGAGGAACTTCTCAACCGTATGCCTATGACACCAGATGTTGCTACTTGGGGTGCCTTACTTGGGGCTTGTAAGAAACACGGTGATAGTGAAATGGGAAGAAGGGTTGGGAGGAAGCTGATTGAGCTTCAGCCTGACCATGATGGTTTCCACGTGTTGTTATCGAACATATATGCTTCAAAAGGAAAATGGGATGATGTTCTTGAGATTAGGGGCATGATGACAAAACATAGGGTTTTGAAGATTCCTGGTTGTAGCATGATTGAAGCAAATGGAGTTATTCATGAATTTCTAGCTGGTGATAAAACACACCCCGACATGGATGCAATTGAGGATATGTTGGTTGAAATGGCTATGAAATTGAAGTTAGAAGGTTATACACCAGACATAAATGAGGTTTTGCTTGATGTTGATGAAGAAGAGAAGGAAAGTACTCTGTTTAGACATAGTGAGAAGCTAGCCATTGCATTTGGTCTTATTAATATTAGTCCACCAACACCTATCCGGATAATGAAAAACTTGAGGATATGTAATGACTGTCACACTGCTGCAAAATTAATCTCCAAGGCTTTTTGTCGGAAAATTGTGGTGAGAGACCGACATCGGTTTCATCACTTTGAGCAGGGGTTTTGTTCATGTAAGGATTACTGGTAG

Protein sequence

MVWREIQLWVCEGLFHPSVGMGSKAGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRHRFHHFEQGFCSCKDYW
Homology
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BLAST of CsaV3_3G017800 vs. NCBI nr
Match: XP_011651207.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like isoform X3 [Cucumis sativus])

HSP 1 Score: 870.5 bits (2248), Expect = 2.7e-249
Identity = 492/613 (80.26%), Postives = 492/613 (80.26%), Query Frame = 0 

Query: 1   MVWREIQLWVCEGLFHPSVGMGSKAGNVEEAKHIYHQMPERSIIASNSMIVLFGMRXXXX 60
           MVWREIQLWVCEGLFHPSVGMGSKAGNVEEAKHIYHQMPERSIIASNSMIVLFGMRXXXX
Sbjct: 1   MVWREIQLWVCEGLFHPSVGMGSKAGNVEEAKHIYHQMPERSIIASNSMIVLFGMRXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGMHKIGVMVDEVVA-------- 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGMHKIGVMVDEVVA        
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGMHKIGVMVDEVVAVSALSACA 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 NLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWXX 180

Query: 181 --------------------------------------------------EMQMSGFKPD 240
                                                                MSGFKPD
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSGFKPD 240

Query: 241 ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY 300
           ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY
Sbjct: 241 ETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFY 300

Query: 301 GMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDE 360
           GMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDE
Sbjct: 301 GMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDE 360

Query: 361 GQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGAC 420
           GQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGAC
Sbjct: 361 GQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGAC 420

Query: 421 KKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPG 480
           KKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPG
Sbjct: 421 KKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPG 480

Query: 481 CSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKES 496
           CSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKES
Sbjct: 481 CSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEEKES 540

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BLAST of CsaV3_3G017800 vs. NCBI nr
Match: KGN57449.1 (hypothetical protein Csa_3G187240 [Cucumis sativus])

HSP 1 Score: 822.4 bits (2123), Expect = 8.3e-235
Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0 

Query: 100 MHKIGVMVDEVVAEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVI 159
           MHKIGVMVDEVVAEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVI
Sbjct: 243 MHKIGVMVDEVVAEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVI 302

Query: 160 LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH 219
           LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH
Sbjct: 303 LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH 362

Query: 220 VTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEA 279
           VTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEA
Sbjct: 363 VTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEA 422

Query: 280 EELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASK 339
           EELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASK
Sbjct: 423 EELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASK 482

Query: 340 GKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKL 399
           GKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKL
Sbjct: 483 GKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKL 542

Query: 400 KLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCH 459
           KLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCH
Sbjct: 543 KLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCH 602

Query: 460 TAAKLISKAFCRKIVVRDRHRFHHFEQGFCSCKDYW 496
           TAAKLISKAFCRKIVVRDRHRFHHFEQGFCSCKDYW
Sbjct: 603 TAAKLISKAFCRKIVVRDRHRFHHFEQGFCSCKDYW 638

[Close]
BLAST of CsaV3_3G017800 vs. NCBI nr
Match: XP_011651205.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like isoform X1 [Cucumis sativus])

HSP 1 Score: 792.7 bits (2046), Expect = 7.0e-226
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0 

Query: 116 MSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVE 175
           MSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVE
Sbjct: 433 MSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVE 492

Query: 176 TALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACR 235
           TALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACR
Sbjct: 493 TALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACR 552

Query: 236 HMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATW 295
           HMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATW
Sbjct: 553 HMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATW 612

Query: 296 GALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKH 355
           GALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKH
Sbjct: 613 GALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKH 672

Query: 356 RVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDV 415
           RVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDV
Sbjct: 673 RVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDV 732

Query: 416 DEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVV 475
           DEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVV
Sbjct: 733 DEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVV 792

Query: 476 RDRHRFHHFEQGFCSCKDYW 496
           RDRHRFHHFEQGFCSCKDYW
Sbjct: 793 RDRHRFHHFEQGFCSCKDYW 812

[Close]
BLAST of CsaV3_3G017800 vs. NCBI nr
Match: XP_011651206.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like isoform X2 [Cucumis sativus])

HSP 1 Score: 792.7 bits (2046), Expect = 7.0e-226
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0 

Query: 116 MSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVE 175
           MSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVE
Sbjct: 238 MSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVE 297

Query: 176 TALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACR 235
           TALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACR
Sbjct: 298 TALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACR 357

Query: 236 HMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATW 295
           HMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATW
Sbjct: 358 HMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATW 417

Query: 296 GALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKH 355
           GALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKH
Sbjct: 418 GALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKH 477

Query: 356 RVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDV 415
           RVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDV
Sbjct: 478 RVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDV 537

Query: 416 DEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVV 475
           DEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVV
Sbjct: 538 DEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVV 597

Query: 476 RDRHRFHHFEQGFCSCKDYW 496
           RDRHRFHHFEQGFCSCKDYW
Sbjct: 598 RDRHRFHHFEQGFCSCKDYW 617

[Close]
BLAST of CsaV3_3G017800 vs. NCBI nr
Match: XP_016902068.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like [Cucumis melo])

HSP 1 Score: 780.8 bits (2015), Expect = 2.8e-222
Identity = 372/380 (97.89%), Postives = 378/380 (99.47%), Query Frame = 0 

Query: 116 MSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVE 175
           MSGFKPDE TLVSVISACARLAALEQGKWVHAYIK+NGLTINVILGTTLIDMYMKCGCVE
Sbjct: 433 MSGFKPDEATLVSVISACARLAALEQGKWVHAYIKKNGLTINVILGTTLIDMYMKCGCVE 492

Query: 176 TALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACR 235
           TALEVFYGMIEKG+STWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITF+GVLGACR
Sbjct: 493 TALEVFYGMIEKGVSTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFVGVLGACR 552

Query: 236 HMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATW 295
           HMGLVDEGQHHF+SMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATW
Sbjct: 553 HMGLVDEGQHHFHSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATW 612

Query: 296 GALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKH 355
           GALLGACKKHGDSEMG+RVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKH
Sbjct: 613 GALLGACKKHGDSEMGKRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKH 672

Query: 356 RVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDV 415
           RVLKIPGCSMIEANGVIHEFLAGDKTHP+MDAIEDMLVEMAMKLKLEGYTPD NEVLLDV
Sbjct: 673 RVLKIPGCSMIEANGVIHEFLAGDKTHPNMDAIEDMLVEMAMKLKLEGYTPDTNEVLLDV 732

Query: 416 DEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVV 475
           DEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVV
Sbjct: 733 DEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVV 792

Query: 476 RDRHRFHHFEQGFCSCKDYW 496
           RDRHRFHHFEQGFCSCKDYW
Sbjct: 793 RDRHRFHHFEQGFCSCKDYW 812

[Close]
BLAST of CsaV3_3G017800 vs. TAIR10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 419.9 bits (1078), Expect = 2.3e-117
Identity = 191/385 (49.61%), Postives = 269/385 (69.87%), Query Frame = 0 

Query: 113 EMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKR--NGLTINVILGTTLIDMYMK 172
           EM  SG  P++ T++S++ ACA L A++ G+W+H YI +   G+T    L T+LIDMY K
Sbjct: 357 EMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAK 416

Query: 173 CGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGV 232
           CG +E A +VF  ++ K +S+WNA+I G AM+G  ++S D+FS M+K  + P++ITF+G+
Sbjct: 417 CGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGL 476

Query: 233 LGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTP 292
           L AC H G++D G+H F +M  D+K+ P ++HYGCM+DLLG +G  +EAEE++N M M P
Sbjct: 477 LSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEP 536

Query: 293 DVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRG 352
           D   W +LL ACK HG+ E+G      LI+++P++ G +VLLSNIYAS G+W++V + R 
Sbjct: 537 DGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRA 596

Query: 353 MMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINE 412
           ++    + K+PGCS IE + V+HEF+ GDK HP    I  ML EM + L+  G+ PD +E
Sbjct: 597 LLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSE 656

Query: 413 VLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFC 472
           VL +++EE KE  L  HSEKLAIAFGLI+  P T + I+KNLR+C +CH A KLISK + 
Sbjct: 657 VLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYK 716

Query: 473 RKIVVRDRHRFHHFEQGFCSCKDYW 496
           R+I+ RDR RFHHF  G CSC DYW
Sbjct: 717 REIIARDRTRFHHFRDGVCSCNDYW 741

[Close]
BLAST of CsaV3_3G017800 vs. TAIR10
Match: AT5G40405.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 414.8 bits (1065), Expect = 7.2e-116
Identity = 188/382 (49.21%), Postives = 265/382 (69.37%), Query Frame = 0 

Query: 114 MQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGC 173
           MQ+ G K +   ++SV+SAC +L AL+QG+W H+YI+RN + I V L TTL+D+Y KCG 
Sbjct: 231 MQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGD 290

Query: 174 VETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGA 233
           +E A+EVF+GM EK + TW++ + GLAMNG  E  L++FS MK+  VTPN +TF+ VL  
Sbjct: 291 MEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRG 350

Query: 234 CRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVA 293
           C  +G VDEGQ HF SM ++  I+P ++HYGC+VDL  RAG+L++A  ++ +MPM P  A
Sbjct: 351 CSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAA 410

Query: 294 TWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMT 353
            W +LL A + + + E+G    +K++EL+  + G +VLLSNIYA    WD+V  +R  M 
Sbjct: 411 VWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMK 470

Query: 354 KHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLL 413
              V K PGCS++E NG +HEF  GDK+HP    I+ +  +++ +L+L GY  D   V+ 
Sbjct: 471 SKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMF 530

Query: 414 DVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKI 473
           D+DEEEKE  L  HSEK AIAFG++++    PIRI+KNLR+C DCH  + +ISK F R+I
Sbjct: 531 DIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREI 590

Query: 474 VVRDRHRFHHFEQGFCSCKDYW 496
           +VRDR+RFHHF+ G CSC  +W
Sbjct: 591 IVRDRNRFHHFKDGHCSCNGFW 612

[Close]
BLAST of CsaV3_3G017800 vs. TAIR10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 408.7 bits (1049), Expect = 5.2e-114
Identity = 187/376 (49.73%), Postives = 265/376 (70.48%), Query Frame = 0 

Query: 120 KPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALE 179
           +P+  TLVSV+ A +RL +LE G+W+H Y + +G+ I+ +LG+ LIDMY KCG +E A+ 
Sbjct: 271 RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIH 330

Query: 180 VFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGL 239
           VF  +  + + TW+A+I G A++G    ++D F  M++  V P+++ ++ +L AC H GL
Sbjct: 331 VFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGL 390

Query: 240 VDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALL 299
           V+EG+ +F  M+    ++P ++HYGCMVDLLGR+G L EAEE +  MP+ PD   W ALL
Sbjct: 391 VEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450

Query: 300 GACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLK 359
           GAC+  G+ EMG+RV   L+++ P   G +V LSN+YAS+G W +V E+R  M +  + K
Sbjct: 451 GACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRK 510

Query: 360 IPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEE 419
            PGCS+I+ +GV+HEF+  D +HP    I  MLVE++ KL+L GY P   +VLL+++EE+
Sbjct: 511 DPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEED 570

Query: 420 KESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRH 479
           KE+ L  HSEK+A AFGLI+ SP  PIRI+KNLRIC DCH++ KLISK + RKI VRDR 
Sbjct: 571 KENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRK 630

Query: 480 RFHHFEQGFCSCKDYW 496
           RFHHF+ G CSC DYW
Sbjct: 631 RFHHFQDGSCSCMDYW 646

[Close]
BLAST of CsaV3_3G017800 vs. TAIR10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 401.7 bits (1031), Expect = 6.3e-112
Identity = 187/377 (49.60%), Postives = 253/377 (67.11%), Query Frame = 0 

Query: 120 KPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALE 179
           +PD  +L + +SACA+L ALEQGKW+H+Y+ +  + ++ +LG  LIDMY KCG +E ALE
Sbjct: 244 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303

Query: 180 VFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGL 239
           VF  + +K +  W ALI G A +G    ++  F  M+K  + PN ITF  VL AC + GL
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 363

Query: 240 VDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALL 299
           V+EG+  FYSM  D+ ++P ++HYGC+VDLLGRAG L EA+  +  MP+ P+   WGALL
Sbjct: 364 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423

Query: 300 GACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLK 359
            AC+ H + E+G  +G  LI + P H G +V  +NI+A   KWD   E R +M +  V K
Sbjct: 424 KACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 483

Query: 360 IPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLD-VDEE 419
           +PGCS I   G  HEFLAGD++HP+++ I+     M  KL+  GY P++ E+LLD VD++
Sbjct: 484 VPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDD 543

Query: 420 EKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDR 479
           E+E+ + +HSEKLAI +GLI   P T IRIMKNLR+C DCH   KLISK + R IV+RDR
Sbjct: 544 EREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDR 603

Query: 480 HRFHHFEQGFCSCKDYW 496
            RFHHF  G CSC DYW
Sbjct: 604 TRFHHFRDGKCSCGDYW 620

[Close]
BLAST of CsaV3_3G017800 vs. TAIR10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 394.8 bits (1013), Expect = 7.8e-110
Identity = 188/388 (48.45%), Postives = 266/388 (68.56%), Query Frame = 0 

Query: 110 VVAEMQM-SGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMY 169
           V  E+Q+    K ++ TLVS +SACA++ ALE G+W+H+YIK++G+ +N  + + LI MY
Sbjct: 351 VFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMY 410

Query: 170 MKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFM 229
            KCG +E + EVF  + ++ +  W+A+I GLAM+G    ++DMF  M++ +V PN +TF 
Sbjct: 411 SKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFT 470

Query: 230 GVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPM 289
            V  AC H GLVDE +  F+ M  ++ I P  KHY C+VD+LGR+G L++A + +  MP+
Sbjct: 471 NVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPI 530

Query: 290 TPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEI 349
            P  + WGALLGACK H +  +      +L+EL+P +DG HVLLSNIYA  GKW++V E+
Sbjct: 531 PPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSEL 590

Query: 350 RGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDI 409
           R  M    + K PGCS IE +G+IHEFL+GD  HP  + +   L E+  KLK  GY P+I
Sbjct: 591 RKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEI 650

Query: 410 NEVLLDVDEEE-KESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISK 469
           ++VL  ++EEE KE +L  HSEKLAI +GLI+   P  IR++KNLR+C DCH+ AKLIS+
Sbjct: 651 SQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQ 710

Query: 470 AFCRKIVVRDRHRFHHFEQGFCSCKDYW 496
            + R+I+VRDR+RFHHF  G CSC D+W
Sbjct: 711 LYDREIIVRDRYRFHHFRNGQCSCNDFW 738

[Close]
BLAST of CsaV3_3G017800 vs. Swiss-Prot
Match: sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 419.9 bits (1078), Expect = 4.1e-116
Identity = 191/385 (49.61%), Postives = 269/385 (69.87%), Query Frame = 0 

Query: 113 EMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKR--NGLTINVILGTTLIDMYMK 172
           EM  SG  P++ T++S++ ACA L A++ G+W+H YI +   G+T    L T+LIDMY K
Sbjct: 357 EMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAK 416

Query: 173 CGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGV 232
           CG +E A +VF  ++ K +S+WNA+I G AM+G  ++S D+FS M+K  + P++ITF+G+
Sbjct: 417 CGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGL 476

Query: 233 LGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTP 292
           L AC H G++D G+H F +M  D+K+ P ++HYGCM+DLLG +G  +EAEE++N M M P
Sbjct: 477 LSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEP 536

Query: 293 DVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRG 352
           D   W +LL ACK HG+ E+G      LI+++P++ G +VLLSNIYAS G+W++V + R 
Sbjct: 537 DGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRA 596

Query: 353 MMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINE 412
           ++    + K+PGCS IE + V+HEF+ GDK HP    I  ML EM + L+  G+ PD +E
Sbjct: 597 LLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSE 656

Query: 413 VLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFC 472
           VL +++EE KE  L  HSEKLAIAFGLI+  P T + I+KNLR+C +CH A KLISK + 
Sbjct: 657 VLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYK 716

Query: 473 RKIVVRDRHRFHHFEQGFCSCKDYW 496
           R+I+ RDR RFHHF  G CSC DYW
Sbjct: 717 REIIARDRTRFHHFRDGVCSCNDYW 741

[Close]
BLAST of CsaV3_3G017800 vs. Swiss-Prot
Match: sp|Q9FND7|PP410_ARATH (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H14 PE=3 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.3e-114
Identity = 188/382 (49.21%), Postives = 265/382 (69.37%), Query Frame = 0 

Query: 114 MQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGC 173
           MQ+ G K +   ++SV+SAC +L AL+QG+W H+YI+RN + I V L TTL+D+Y KCG 
Sbjct: 231 MQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGD 290

Query: 174 VETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGA 233
           +E A+EVF+GM EK + TW++ + GLAMNG  E  L++FS MK+  VTPN +TF+ VL  
Sbjct: 291 MEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRG 350

Query: 234 CRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVA 293
           C  +G VDEGQ HF SM ++  I+P ++HYGC+VDL  RAG+L++A  ++ +MPM P  A
Sbjct: 351 CSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAA 410

Query: 294 TWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMT 353
            W +LL A + + + E+G    +K++EL+  + G +VLLSNIYA    WD+V  +R  M 
Sbjct: 411 VWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMK 470

Query: 354 KHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLL 413
              V K PGCS++E NG +HEF  GDK+HP    I+ +  +++ +L+L GY  D   V+ 
Sbjct: 471 SKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMF 530

Query: 414 DVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKI 473
           D+DEEEKE  L  HSEK AIAFG++++    PIRI+KNLR+C DCH  + +ISK F R+I
Sbjct: 531 DIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREI 590

Query: 474 VVRDRHRFHHFEQGFCSCKDYW 496
           +VRDR+RFHHF+ G CSC  +W
Sbjct: 591 IVRDRNRFHHFKDGHCSCNGFW 612

[Close]
BLAST of CsaV3_3G017800 vs. Swiss-Prot
Match: sp|Q9FI80|PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 9.4e-113
Identity = 187/376 (49.73%), Postives = 265/376 (70.48%), Query Frame = 0 

Query: 120 KPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALE 179
           +P+  TLVSV+ A +RL +LE G+W+H Y + +G+ I+ +LG+ LIDMY KCG +E A+ 
Sbjct: 271 RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIH 330

Query: 180 VFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGL 239
           VF  +  + + TW+A+I G A++G    ++D F  M++  V P+++ ++ +L AC H GL
Sbjct: 331 VFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGL 390

Query: 240 VDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALL 299
           V+EG+ +F  M+    ++P ++HYGCMVDLLGR+G L EAEE +  MP+ PD   W ALL
Sbjct: 391 VEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450

Query: 300 GACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLK 359
           GAC+  G+ EMG+RV   L+++ P   G +V LSN+YAS+G W +V E+R  M +  + K
Sbjct: 451 GACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRK 510

Query: 360 IPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDVDEEE 419
            PGCS+I+ +GV+HEF+  D +HP    I  MLVE++ KL+L GY P   +VLL+++EE+
Sbjct: 511 DPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEED 570

Query: 420 KESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDRH 479
           KE+ L  HSEK+A AFGLI+ SP  PIRI+KNLRIC DCH++ KLISK + RKI VRDR 
Sbjct: 571 KENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRK 630

Query: 480 RFHHFEQGFCSCKDYW 496
           RFHHF+ G CSC DYW
Sbjct: 631 RFHHFQDGSCSCMDYW 646

[Close]
BLAST of CsaV3_3G017800 vs. Swiss-Prot
Match: sp|Q9FJY7|PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.1e-110
Identity = 187/377 (49.60%), Postives = 253/377 (67.11%), Query Frame = 0 

Query: 120 KPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALE 179
           +PD  +L + +SACA+L ALEQGKW+H+Y+ +  + ++ +LG  LIDMY KCG +E ALE
Sbjct: 244 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303

Query: 180 VFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGL 239
           VF  + +K +  W ALI G A +G    ++  F  M+K  + PN ITF  VL AC + GL
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 363

Query: 240 VDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALL 299
           V+EG+  FYSM  D+ ++P ++HYGC+VDLLGRAG L EA+  +  MP+ P+   WGALL
Sbjct: 364 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423

Query: 300 GACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLK 359
            AC+ H + E+G  +G  LI + P H G +V  +NI+A   KWD   E R +M +  V K
Sbjct: 424 KACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 483

Query: 360 IPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLD-VDEE 419
           +PGCS I   G  HEFLAGD++HP+++ I+     M  KL+  GY P++ E+LLD VD++
Sbjct: 484 VPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDD 543

Query: 420 EKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVVRDR 479
           E+E+ + +HSEKLAI +GLI   P T IRIMKNLR+C DCH   KLISK + R IV+RDR
Sbjct: 544 EREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDR 603

Query: 480 HRFHHFEQGFCSCKDYW 496
            RFHHF  G CSC DYW
Sbjct: 604 TRFHHFRDGKCSCGDYW 620

[Close]
BLAST of CsaV3_3G017800 vs. Swiss-Prot
Match: sp|O82380|PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 1.4e-108
Identity = 188/388 (48.45%), Postives = 266/388 (68.56%), Query Frame = 0 

Query: 110 VVAEMQM-SGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMY 169
           V  E+Q+    K ++ TLVS +SACA++ ALE G+W+H+YIK++G+ +N  + + LI MY
Sbjct: 351 VFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMY 410

Query: 170 MKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFM 229
            KCG +E + EVF  + ++ +  W+A+I GLAM+G    ++DMF  M++ +V PN +TF 
Sbjct: 411 SKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFT 470

Query: 230 GVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPM 289
            V  AC H GLVDE +  F+ M  ++ I P  KHY C+VD+LGR+G L++A + +  MP+
Sbjct: 471 NVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPI 530

Query: 290 TPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEI 349
            P  + WGALLGACK H +  +      +L+EL+P +DG HVLLSNIYA  GKW++V E+
Sbjct: 531 PPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSEL 590

Query: 350 RGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDI 409
           R  M    + K PGCS IE +G+IHEFL+GD  HP  + +   L E+  KLK  GY P+I
Sbjct: 591 RKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEI 650

Query: 410 NEVLLDVDEEE-KESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISK 469
           ++VL  ++EEE KE +L  HSEKLAI +GLI+   P  IR++KNLR+C DCH+ AKLIS+
Sbjct: 651 SQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQ 710

Query: 470 AFCRKIVVRDRHRFHHFEQGFCSCKDYW 496
            + R+I+VRDR+RFHHF  G CSC D+W
Sbjct: 711 LYDREIIVRDRYRFHHFRNGQCSCNDFW 738

[Close]
BLAST of CsaV3_3G017800 vs. TrEMBL
Match: tr|A0A0A0L8Y7|A0A0A0L8Y7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G187240 PE=4 SV=1)

HSP 1 Score: 822.4 bits (2123), Expect = 5.5e-235
Identity = 396/396 (100.00%), Postives = 396/396 (100.00%), Query Frame = 0 

Query: 100 MHKIGVMVDEVVAEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVI 159
           MHKIGVMVDEVVAEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVI
Sbjct: 243 MHKIGVMVDEVVAEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVI 302

Query: 160 LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH 219
           LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH
Sbjct: 303 LGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCH 362

Query: 220 VTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEA 279
           VTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEA
Sbjct: 363 VTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEA 422

Query: 280 EELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASK 339
           EELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASK
Sbjct: 423 EELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASK 482

Query: 340 GKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKL 399
           GKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKL
Sbjct: 483 GKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKL 542

Query: 400 KLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCH 459
           KLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCH
Sbjct: 543 KLEGYTPDINEVLLDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCH 602

Query: 460 TAAKLISKAFCRKIVVRDRHRFHHFEQGFCSCKDYW 496
           TAAKLISKAFCRKIVVRDRHRFHHFEQGFCSCKDYW
Sbjct: 603 TAAKLISKAFCRKIVVRDRHRFHHFEQGFCSCKDYW 638

[Close]
BLAST of CsaV3_3G017800 vs. TrEMBL
Match: tr|A0A1S4E1G8|A0A1S4E1G8_CUCME (pentatricopeptide repeat-containing protein At3g62890-like OS=Cucumis melo OX=3656 GN=LOC103496856 PE=4 SV=1)

HSP 1 Score: 780.8 bits (2015), Expect = 1.8e-222
Identity = 372/380 (97.89%), Postives = 378/380 (99.47%), Query Frame = 0 

Query: 116 MSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVE 175
           MSGFKPDE TLVSVISACARLAALEQGKWVHAYIK+NGLTINVILGTTLIDMYMKCGCVE
Sbjct: 433 MSGFKPDEATLVSVISACARLAALEQGKWVHAYIKKNGLTINVILGTTLIDMYMKCGCVE 492

Query: 176 TALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACR 235
           TALEVFYGMIEKG+STWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITF+GVLGACR
Sbjct: 493 TALEVFYGMIEKGVSTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFVGVLGACR 552

Query: 236 HMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATW 295
           HMGLVDEGQHHF+SMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATW
Sbjct: 553 HMGLVDEGQHHFHSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATW 612

Query: 296 GALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKH 355
           GALLGACKKHGDSEMG+RVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKH
Sbjct: 613 GALLGACKKHGDSEMGKRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKH 672

Query: 356 RVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLLDV 415
           RVLKIPGCSMIEANGVIHEFLAGDKTHP+MDAIEDMLVEMAMKLKLEGYTPD NEVLLDV
Sbjct: 673 RVLKIPGCSMIEANGVIHEFLAGDKTHPNMDAIEDMLVEMAMKLKLEGYTPDTNEVLLDV 732

Query: 416 DEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVV 475
           DEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVV
Sbjct: 733 DEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKIVV 792

Query: 476 RDRHRFHHFEQGFCSCKDYW 496
           RDRHRFHHFEQGFCSCKDYW
Sbjct: 793 RDRHRFHHFEQGFCSCKDYW 812

[Close]
BLAST of CsaV3_3G017800 vs. TrEMBL
Match: tr|A0A2I4EA65|A0A2I4EA65_9ROSI (pentatricopeptide repeat-containing protein At3g62890-like OS=Juglans regia OX=51240 GN=LOC108987751 PE=4 SV=1)

HSP 1 Score: 655.6 bits (1690), Expect = 8.9e-185
Identity = 303/383 (79.11%), Postives = 338/383 (88.25%), Query Frame = 0 

Query: 113 EMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCG 172
           EMQ+ G  PDETTLVSVISAC  LAAL+ GKW+HAYIK+NGL +NVILGTTLIDMYMKCG
Sbjct: 404 EMQLDGLSPDETTLVSVISACTHLAALDLGKWIHAYIKKNGLKVNVILGTTLIDMYMKCG 463

Query: 173 CVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLG 232
           CVE ALEVFYGM+E+ +STWNALILGLA+NGLV+ SLDMFS MK+C V PNEITFMGVLG
Sbjct: 464 CVENALEVFYGMVERWVSTWNALILGLAINGLVDKSLDMFSEMKRCGVEPNEITFMGVLG 523

Query: 233 ACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDV 292
           ACRHMGLVDEG  HF SMI +HKI+PN+KHYGCMVDLLGRAG L+EAE+L+  MPM PDV
Sbjct: 524 ACRHMGLVDEGYRHFNSMIQEHKIEPNIKHYGCMVDLLGRAGMLKEAEQLIETMPMAPDV 583

Query: 293 ATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMM 352
           ATWGALLGACKKHGD++MG RVGRKLIE QPDHDGFHVLLSNIYASKG WD  LE+RGMM
Sbjct: 584 ATWGALLGACKKHGDNKMGERVGRKLIEFQPDHDGFHVLLSNIYASKGNWDGALEVRGMM 643

Query: 353 TKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVL 412
            +H V+K PGCSMIEA GV+HEFLAGDKTHP M  IED L E+A KLK+EGY PD NE+ 
Sbjct: 644 MRHGVVKTPGCSMIEAKGVVHEFLAGDKTHPWMKEIEDKLDEIAKKLKMEGYAPDTNEIS 703

Query: 413 LDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRK 472
           LD+D+EEKE++LFRHSEKLAIAFGLI ISPPTPIRI+KNLRICNDCH AAK IS+AF R+
Sbjct: 704 LDIDQEEKETSLFRHSEKLAIAFGLIAISPPTPIRIIKNLRICNDCHAAAKFISRAFNRE 763

Query: 473 IVVRDRHRFHHFEQGFCSCKDYW 496
           IV+RDRHRFHHF+QG CSC DYW
Sbjct: 764 IVIRDRHRFHHFKQGSCSCTDYW 786

[Close]
BLAST of CsaV3_3G017800 vs. TrEMBL
Match: tr|A0A2N9FFM9|A0A2N9FFM9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13865 PE=4 SV=1)

HSP 1 Score: 654.4 bits (1687), Expect = 2.0e-184
Identity = 306/382 (80.10%), Postives = 338/382 (88.48%), Query Frame = 0 

Query: 114 MQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGC 173
           MQ+ G +PDETTLVSVISAC  LAAL+ GKW+HAYIK+NGL +NVILGTTL DMYMKCGC
Sbjct: 365 MQLEGIRPDETTLVSVISACTHLAALDLGKWIHAYIKKNGLKVNVILGTTLTDMYMKCGC 424

Query: 174 VETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGA 233
           VE ALEVFYGM EKG+STWNALILGLA+NGLV+ SLDMF  MKKC V PNEITFMGVLGA
Sbjct: 425 VENALEVFYGMEEKGVSTWNALILGLAINGLVDKSLDMFFEMKKCGVVPNEITFMGVLGA 484

Query: 234 CRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVA 293
           CRHMGLVDEG+ HF SMI +HKI+PNVKHYGCMVDLLGRAG L+EAEEL+  MPM PDVA
Sbjct: 485 CRHMGLVDEGRRHFNSMIQEHKIEPNVKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVA 544

Query: 294 TWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMT 353
           TWGALLGACKKHG++E G RVGRKLIELQPDHDGFHVLLSNIYASKG WDDVLE+RG M 
Sbjct: 545 TWGALLGACKKHGENETGERVGRKLIELQPDHDGFHVLLSNIYASKGNWDDVLEVRGTMI 604

Query: 354 KHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVLL 413
           +HRV+K PGCSMIEANGV+HEFLAGDKTHP ++ IED L EMA KLK+EGY P+ NEV L
Sbjct: 605 QHRVVKTPGCSMIEANGVVHEFLAGDKTHPWINEIEDKLDEMAKKLKMEGYVPETNEVSL 664

Query: 414 DVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRKI 473
           D+D+EEKE++LFRHSEKLAIAFGLI I PPTPIRI+KNLRIC DCH AAKLIS+AF R+I
Sbjct: 665 DIDQEEKETSLFRHSEKLAIAFGLIAIIPPTPIRIIKNLRICTDCHAAAKLISRAFDREI 724

Query: 474 VVRDRHRFHHFEQGFCSCKDYW 496
           VVRDRHRFHHF+   CSC DYW
Sbjct: 725 VVRDRHRFHHFKHSSCSCMDYW 746

[Close]
BLAST of CsaV3_3G017800 vs. TrEMBL
Match: tr|A0A1Q3CL68|A0A1Q3CL68_CEPFO (PPR domain-containing protein/PPR_2 domain-containing protein/DYW_deaminase domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_24455 PE=4 SV=1)

HSP 1 Score: 646.4 bits (1666), Expect = 5.4e-182
Identity = 303/383 (79.11%), Postives = 339/383 (88.51%), Query Frame = 0 

Query: 113 EMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCG 172
           EMQ+ GF PDETTLVS+ISAC  LAAL+QGKW+HAYIK+N L INV+LGTTLI+MYMK G
Sbjct: 414 EMQLQGFNPDETTLVSIISACTHLAALDQGKWIHAYIKKNRLKINVVLGTTLINMYMKLG 473

Query: 173 CVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLG 232
           CVE ALEVF GM EKG+STWN++ILGLAMNGLVE SL MFS +KKC + PN+ITFMGVLG
Sbjct: 474 CVENALEVFCGMEEKGVSTWNSVILGLAMNGLVEKSLHMFSEVKKCGMVPNDITFMGVLG 533

Query: 233 ACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDV 292
           ACRHMGLVDEGQH+F+SMI +H+I PNVKHYGCMVDLLGRAG L+EAEEL+  MPM PDV
Sbjct: 534 ACRHMGLVDEGQHYFHSMIKEHQIVPNVKHYGCMVDLLGRAGMLKEAEELIECMPMPPDV 593

Query: 293 ATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMM 352
           ATWGALLGACKKHG++EMG RVGRKL+ELQPDHDGFHVLLSNI+ASKG WD VLEIR MM
Sbjct: 594 ATWGALLGACKKHGNNEMGARVGRKLVELQPDHDGFHVLLSNIHASKGNWDGVLEIRWMM 653

Query: 353 TKHRVLKIPGCSMIEANGVIHEFLAGDKTHPDMDAIEDMLVEMAMKLKLEGYTPDINEVL 412
            +H V+K PGCSMIEANG +HEFLAGDKTHP ++ IE ML EMAMKLK+EGY PD +EV 
Sbjct: 654 MQHGVVKTPGCSMIEANGTVHEFLAGDKTHPQINEIEGMLDEMAMKLKIEGYAPDTHEVS 713

Query: 413 LDVDEEEKESTLFRHSEKLAIAFGLINISPPTPIRIMKNLRICNDCHTAAKLISKAFCRK 472
           LD+DEEEKE++LFRHSEKLAIAFGL+ IS PTPIRIMKNLRICNDCH AAK IS AF R+
Sbjct: 714 LDIDEEEKETSLFRHSEKLAIAFGLLTISSPTPIRIMKNLRICNDCHNAAKFISSAFNRE 773

Query: 473 IVVRDRHRFHHFEQGFCSCKDYW 496
           IVVRDRHRFHHF+QG CSC DYW
Sbjct: 774 IVVRDRHRFHHFKQGSCSCMDYW 796

The following BLAST results are available for this feature:
BLAST of CsaV3_3G017800 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011651207.12.7e-24980.26PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like isoform X3... [more]
KGN57449.18.3e-235100.00hypothetical protein Csa_3G187240 [Cucumis sativus][more]
XP_011651205.17.0e-226100.00PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like isoform X1... [more]
XP_011651206.17.0e-226100.00PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like isoform X2... [more]
XP_016902068.12.8e-22297.89PREDICTED: pentatricopeptide repeat-containing protein At3g62890-like [Cucumis m... [more]
BLAST of CsaV3_3G017800 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G08070.12.3e-11749.61Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G40405.17.2e-11649.21Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G48910.15.2e-11449.73Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G66520.16.3e-11249.60Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G29760.17.8e-11048.45Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CsaV3_3G017800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LN01|PPR21_ARATH4.1e-11649.61Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
sp|Q9FND7|PP410_ARATH1.3e-11449.21Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis th... [more]
sp|Q9FI80|PP425_ARATH9.4e-11349.73Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
sp|Q9FJY7|PP449_ARATH1.1e-11049.60Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
sp|O82380|PP175_ARATH1.4e-10848.45Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
BLAST of CsaV3_3G017800 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L8Y7|A0A0A0L8Y7_CUCSA5.5e-235100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G187240 PE=4 SV=1[more]
tr|A0A1S4E1G8|A0A1S4E1G8_CUCME1.8e-22297.89pentatricopeptide repeat-containing protein At3g62890-like OS=Cucumis melo OX=36... [more]
tr|A0A2I4EA65|A0A2I4EA65_9ROSI8.9e-18579.11pentatricopeptide repeat-containing protein At3g62890-like OS=Juglans regia OX=5... [more]
tr|A0A2N9FFM9|A0A2N9FFM9_FAGSY2.0e-18480.10Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS13865 PE=4 SV=1[more]
tr|A0A1Q3CL68|A0A1Q3CL68_CEPFO5.4e-18279.11PPR domain-containing protein/PPR_2 domain-containing protein/DYW_deaminase doma... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR032867DYW_dom
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G017800.1CsaV3_3G017800.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 243..404
e-value: 9.7E-20
score: 73.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 140..242
e-value: 3.2E-20
score: 74.2
coord: 18..139
e-value: 3.2E-20
score: 74.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 274..347
coord: 59..97
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 294..320
e-value: 1.3
score: 9.4
coord: 23..42
e-value: 0.56
score: 10.5
coord: 47..73
e-value: 2.9E-4
score: 20.8
coord: 75..105
e-value: 9.6E-4
score: 19.1
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 256..286
e-value: 5.6E-6
score: 25.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 188..234
e-value: 4.3E-9
score: 36.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 47..74
e-value: 0.001
score: 17.1
coord: 162..190
e-value: 2.4E-5
score: 22.2
coord: 263..286
e-value: 0.001
score: 17.1
coord: 75..102
e-value: 0.0026
score: 15.8
coord: 191..224
e-value: 2.3E-5
score: 22.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 259..289
score: 8.528
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 42..72
score: 7.618
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 122..156
score: 7.476
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 73..107
score: 9.405
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 223..258
score: 6.588
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 291..321
score: 6.95
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 324..359
score: 5.623
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 11..41
score: 5.393
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 157..187
score: 7.684
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 188..222
score: 10.084
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 361..485
e-value: 2.5E-38
score: 130.7
NoneNo IPR availablePANTHERPTHR24015:SF678SUBFAMILY NOT NAMEDcoord: 29..413
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 29..413

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G017800CSPI03G17650Wild cucumber (PI 183967)cpicucB144
CsaV3_3G017800Cucsa.108500Cucumber (Gy14) v1cgycucB137
CsaV3_3G017800CsGy3G017670Cucumber (Gy14) v2cgybcucB117
CsaV3_3G017800MELO3C020309Melon (DHL92) v3.5.1cucmeB242
CsaV3_3G017800MELO3C020309.2Melon (DHL92) v3.6.1cucmedB244
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G017800Silver-seed gourdcarcucB0203
CsaV3_3G017800Silver-seed gourdcarcucB0802
CsaV3_3G017800Cucurbita maxima (Rimu)cmacucB0285
CsaV3_3G017800Cucurbita maxima (Rimu)cmacucB0550
CsaV3_3G017800Cucurbita moschata (Rifu)cmocucB0276
CsaV3_3G017800Cucurbita moschata (Rifu)cmocucB0535
CsaV3_3G017800Cucurbita pepo (Zucchini)cpecucB0689
CsaV3_3G017800Cucurbita pepo (Zucchini)cpecucB0753
CsaV3_3G017800Bottle gourd (USVL1VR-Ls)cuclsiB230
CsaV3_3G017800Melon (DHL92) v3.5.1cucmeB247
CsaV3_3G017800Melon (DHL92) v3.6.1cucmedB246
CsaV3_3G017800Watermelon (Charleston Gray)cucwcgB238
CsaV3_3G017800Watermelon (97103) v1cucwmB252
CsaV3_3G017800Watermelon (97103) v2cucwmbB217
CsaV3_3G017800Wax gourdcucwgoB287