CsaV3_3G017310 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G017310
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 12990833 .. 12991082 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGTACGGCTGGCGGCTCGGATGCGGAAGAGGCGCGGCTCACGGCTCAAGTGCGGAATGGGATCGGCTCGCGCTCGGCAGTAGGACGGCTCAAGGCTCGGCTTACGACTCGGATGCGGAATGGGATCGGCTCCCGGCTCCCGTACACATACAGCTTGGACAGAGCGCGCGCTTGCGAGAGGAGACGGCTACCGGCGCGGACGCGGAAGAAAAGCTTCACACGGCGGCTAGGCTTCGTCGGACGATCGGCT

mRNA sequence

AGGTACGGCTGGCGGCTCGGATGCGGAAGAGGCGCGGCTCACGGCTCAAGTGCGGAATGGGATCGGCTCGCGCTCGGCAGTAGGACGGCTCAAGGCTCGGCTTACGACTCGGATGCGGAATGGGATCGGCTCCCGGCTCCCGTACACATACAGCTTGGACAGAGCGCGCGCTTGCGAGAGGAGACGGCTACCGGCGCGGACGCGGAAGAAAAGCTTCACACGGCGGCTAGGCTTCGTCGGACGATCGGCT

Coding sequence (CDS)

AGGTACGGCTGGCGGCTCGGATGCGGAAGAGGCGCGGCTCACGGCTCAAGTGCGGAATGGGATCGGCTCGCGCTCGGCAGTAGGACGGCTCAAGGCTCGGCTTACGACTCGGATGCGGAATGGGATCGGCTCCCGGCTCCCGTACACATACAGCTTGGACAGAGCGCGCGCTTGCGAGAGGAGACGGCTACCGGCGCGGACGCGGAAGAAAAGCTTCACACGGCGGCTAGGCTTCGTCGGACGATCGGCT

Protein sequence

RYGWRLGCGRGAAHGSSAEWDRLALGSRTAQGSAYDSDAEWDRLPAPVHIQLGQSARLREETATGADAEEKLHTAARLRRTIGX
Homology
[Close]
BLAST of CsaV3_3G017310 vs. NCBI nr
Match: KGN57397.1 (hypothetical protein Csa_3G183310 [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-07
Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0 

Query: 50 IQLGQSARLREETATGADAEEKLHTAARLRRTIG 84
          +QLGQSARLREETATGADAEEKLHTAARLRRTIG
Sbjct: 10 LQLGQSARLREETATGADAEEKLHTAARLRRTIG 43

[Close]
BLAST of CsaV3_3G017310 vs. TrEMBL
Match: tr|A0A0A0L9V1|A0A0A0L9V1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183310 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.7e-08
Identity = 33/34 (97.06%), Postives = 34/34 (100.00%), Query Frame = 0 

Query: 50 IQLGQSARLREETATGADAEEKLHTAARLRRTIG 84
          +QLGQSARLREETATGADAEEKLHTAARLRRTIG
Sbjct: 10 LQLGQSARLREETATGADAEEKLHTAARLRRTIG 43

The following BLAST results are available for this feature:
BLAST of CsaV3_3G017310 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57397.11.0e-0797.06hypothetical protein Csa_3G183310 [Cucumis sativus][more]
BLAST of CsaV3_3G017310 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G017310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_3G017310 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L9V1|A0A0A0L9V1_CUCSA6.7e-0897.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183310 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G017310.1CsaV3_3G017310.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G017310Wax gourdcucwgoB290
CsaV3_3G017310Cucumber (Chinese Long) v3cuccucB125
CsaV3_3G017310Silver-seed gourdcarcucB0748
CsaV3_3G017310Silver-seed gourdcarcucB0774
CsaV3_3G017310Silver-seed gourdcarcucB1032
CsaV3_3G017310Cucumber (Gy14) v2cgybcucB117
CsaV3_3G017310Cucumber (Gy14) v2cgybcucB215
CsaV3_3G017310Cucumber (Gy14) v2cgybcucB216
CsaV3_3G017310Cucumber (Gy14) v1cgycucB137
CsaV3_3G017310Cucumber (Gy14) v1cgycucB182
CsaV3_3G017310Cucumber (Gy14) v1cgycucB466
CsaV3_3G017310Cucurbita maxima (Rimu)cmacucB0383
CsaV3_3G017310Cucurbita maxima (Rimu)cmacucB0487
CsaV3_3G017310Cucurbita maxima (Rimu)cmacucB0711
CsaV3_3G017310Cucurbita moschata (Rifu)cmocucB0282
CsaV3_3G017310Cucurbita moschata (Rifu)cmocucB0379
CsaV3_3G017310Cucurbita moschata (Rifu)cmocucB0476
CsaV3_3G017310Cucurbita moschata (Rifu)cmocucB0697
CsaV3_3G017310Cucurbita moschata (Rifu)cmocucB1041
CsaV3_3G017310Cucurbita pepo (Zucchini)cpecucB0039
CsaV3_3G017310Cucurbita pepo (Zucchini)cpecucB0200
CsaV3_3G017310Cucurbita pepo (Zucchini)cpecucB0257
CsaV3_3G017310Cucurbita pepo (Zucchini)cpecucB0903
CsaV3_3G017310Wild cucumber (PI 183967)cpicucB144
CsaV3_3G017310Wild cucumber (PI 183967)cpicucB267
CsaV3_3G017310Bottle gourd (USVL1VR-Ls)cuclsiB169
CsaV3_3G017310Bottle gourd (USVL1VR-Ls)cuclsiB227
CsaV3_3G017310Bottle gourd (USVL1VR-Ls)cuclsiB229
CsaV3_3G017310Melon (DHL92) v3.5.1cucmeB236
CsaV3_3G017310Melon (DHL92) v3.6.1cucmedB230
CsaV3_3G017310Watermelon (Charleston Gray)cucwcgB225
CsaV3_3G017310Watermelon (97103) v1cucwmB239
CsaV3_3G017310Watermelon (97103) v2cucwmbB206
CsaV3_3G017310Watermelon (97103) v2cucwmbB227