CsaV3_3G014760 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGGGAGTGTCGCTGGAATTTGGCGAGCCGAAGGAACTGTCTTTTGCACTCCCGATGGCAACATTGGCACCATTGCGGCCACATCCACCCCCGTTTCCCCGAGTATCCCATTTTTCTATCACTTTCTTCTTCCCTAGCTCTTCCGTTTTTTCGTTCCATAACTCTTCCGTTTTCTTCTCTTTTCTTTTTTTTTTTTTACAATTTTTTTTTATAAAATGATTTAAAAGTTTACTTAAAACAACTCAGAAAGTTATATTTAAAATTGCAAGAAAATATTGATTATAATATTTTTTTAAAAAAGTCAAATATTTATTAAATATGTCGCTTAATTTTTTTTTATTTTAAATGTTAATTATATTCATGAACTAATTTTGTGTGTTGTAAATTAAAATTAATTTTATTCAAATGTTGGTTCTTAAGTTAAATGTAACAACAAATTTTAAAAAGGATTGTTTTAGGAAGATTCCATTATATAACCAAAAACAAAATTAGAAATTAAAATATATATTTTTTTGTAGACATTGTAGTGCACATGCAATCGAGAAATGGAAGCATCGTTTCAACTACGACAACAAACAACATGGGATTCTTGGCATCATTCTTAGACGAAGGCGAGATCGTAGTAACGTCTCCAATGTCCTACTGTAATGCGATGTTACCATCTACTGGATATCTAACGTCAAGAATGCAATACATTGGAACAATTCTAAAGGATGACAACATCGAGATGATGAAAGTAACCCCAAACAATTCACATTCATTCTATCTCCTTAAAATGCAAGTTGTGGGGGTAAATATATTCACCAAAGGGAAAAAGGAATAA ATGGGTGGGAGTGTCGCTGGAATTTGGCGAGCCGAAGGAACTGTCTTTTGCACTCCCGATGGCAACATTGGCACCATTGCGGCCACATCCACCCCCGTTTCCCCGAACATTGTAGTGCACATGCAATCGAGAAATGGAAGCATCGTTTCAACTACGACAACAAACAACATGGGATTCTTGGCATCATTCTTAGACGAAGGCGAGATCGTAGTAACGTCTCCAATGTCCTACTGTAATGCGATGTTACCATCTACTGGATATCTAACGTCAAGAATGCAATACATTGGAACAATTCTAAAGGATGACAACATCGAGATGATGAAAGTAACCCCAAACAATTCACATTCATTCTATCTCCTTAAAATGCAAGTTGTGGGGGTAAATATATTCACCAAAGGGAAAAAGGAATAA ATGGGTGGGAGTGTCGCTGGAATTTGGCGAGCCGAAGGAACTGTCTTTTGCACTCCCGATGGCAACATTGGCACCATTGCGGCCACATCCACCCCCGTTTCCCCGAACATTGTAGTGCACATGCAATCGAGAAATGGAAGCATCGTTTCAACTACGACAACAAACAACATGGGATTCTTGGCATCATTCTTAGACGAAGGCGAGATCGTAGTAACGTCTCCAATGTCCTACTGTAATGCGATGTTACCATCTACTGGATATCTAACGTCAAGAATGCAATACATTGGAACAATTCTAAAGGATGACAACATCGAGATGATGAAAGTAACCCCAAACAATTCACATTCATTCTATCTCCTTAAAATGCAAGTTGTGGGGGTAAATATATTCACCAAAGGGAAAAAGGAATAA MGGSVAGIWRAEGTVFCTPDGNIGTIAATSTPVSPNIVVHMQSRNGSIVSTTTTNNMGFLASFLDEGEIVVTSPMSYCNAMLPSTGYLTSRMQYIGTILKDDNIEMMKVTPNNSHSFYLLKMQVVGVNIFTKGKKE
BLAST of CsaV3_3G014760 vs. NCBI nr
Match: KGN57121.1 (hypothetical protein Csa_3G159410 [Cucumis sativus]) HSP 1 Score: 274.6 bits (701), Expect = 1.8e-70 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of CsaV3_3G014760 vs. NCBI nr
Match: XP_008438895.1 (PREDICTED: phylloplanin-like [Cucumis melo]) HSP 1 Score: 127.1 bits (318), Expect = 4.6e-26 Identity = 65/121 (53.72%), Postives = 84/121 (69.42%), Query Frame = 0
BLAST of CsaV3_3G014760 vs. NCBI nr
Match: XP_004134491.2 (PREDICTED: phylloplanin-like [Cucumis sativus] >KGN57120.1 hypothetical protein Csa_3G154410 [Cucumis sativus]) HSP 1 Score: 90.9 bits (224), Expect = 3.6e-15 Identity = 53/121 (43.80%), Postives = 72/121 (59.50%), Query Frame = 0
BLAST of CsaV3_3G014760 vs. NCBI nr
Match: XP_022973793.1 (phylloplanin-like [Cucurbita maxima]) HSP 1 Score: 88.6 bits (218), Expect = 1.8e-14 Identity = 48/109 (44.04%), Postives = 65/109 (59.63%), Query Frame = 0
BLAST of CsaV3_3G014760 vs. NCBI nr
Match: XP_015899888.1 (phylloplanin-like [Ziziphus jujuba]) HSP 1 Score: 85.1 bits (209), Expect = 2.0e-13 Identity = 45/104 (43.27%), Postives = 69/104 (66.35%), Query Frame = 0
BLAST of CsaV3_3G014760 vs. TAIR10
Match: AT3G16660.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 59.3 bits (142), Expect = 2.1e-09 Identity = 40/99 (40.40%), Postives = 52/99 (52.53%), Query Frame = 0
BLAST of CsaV3_3G014760 vs. TAIR10
Match: AT3G16670.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 50.8 bits (120), Expect = 7.6e-07 Identity = 35/99 (35.35%), Postives = 51/99 (51.52%), Query Frame = 0
BLAST of CsaV3_3G014760 vs. Swiss-Prot
Match: sp|Q56S59|PHYLL_TOBAC (Phylloplanin OS=Nicotiana tabacum OX=4097 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 1.0e-05 Identity = 30/92 (32.61%), Postives = 48/92 (52.17%), Query Frame = 0
BLAST of CsaV3_3G014760 vs. TrEMBL
Match: tr|A0A0A0LAL8|A0A0A0LAL8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G159410 PE=4 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 1.2e-70 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of CsaV3_3G014760 vs. TrEMBL
Match: tr|A0A1S3AXJ8|A0A1S3AXJ8_CUCME (phylloplanin-like OS=Cucumis melo OX=3656 GN=LOC103483853 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 3.0e-26 Identity = 65/121 (53.72%), Postives = 84/121 (69.42%), Query Frame = 0
BLAST of CsaV3_3G014760 vs. TrEMBL
Match: tr|A0A0A0L595|A0A0A0L595_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154410 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.4e-15 Identity = 53/121 (43.80%), Postives = 72/121 (59.50%), Query Frame = 0
BLAST of CsaV3_3G014760 vs. TrEMBL
Match: tr|A0A2P5CLV8|A0A2P5CLV8_PARAD (Phylloplanin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_142290 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 8.6e-13 Identity = 47/105 (44.76%), Postives = 67/105 (63.81%), Query Frame = 0
BLAST of CsaV3_3G014760 vs. TrEMBL
Match: tr|A0A2N9GZ37|A0A2N9GZ37_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35408 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.1e-12 Identity = 47/104 (45.19%), Postives = 63/104 (60.58%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |